Psyllid ID: psy14740

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
Protein Sequence
MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS
Secondary Structure (PSIPRED)
ccccHHHHHHccccccccHHHHHHHHHcccEEEEccccEEEEccccccEEEEEEccEEEEEEEcccccccEEEEEccccccccccccccccccccEEEEEccccEEEEEEEHHHHHHHHccHHHHHHHHHcHHHHHHHcHHHHHHccccccEEEEEccccccccEEEEEEcccccHHHHHHHHHHcccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccEEEEEEcccccHHHHHHHHcccccccccEEHHHHHHHHHHHHHccccEEcccccccccccccccEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHcccccccccccccEEEEEEcccccccccccEEEEccccccEEEEEEEEEEEEEccccccccHHHHHHHcccccccHHHHHHccccccccccccccccEEEEcccHHHHHHcccHHHHcccccccccccHHHHHHHHccccccHHHEEEEEEEccEEEEEEEcccccccccccccccccccccccHHHHHHEHccccccEEEEEEEcccccEEEEEEEccccccHEEEHHHEcccHHHHcccHHHHHHHHHHHcccccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEccccccc
Coil and Loop (DISEMBL)
MSKNPELKLRAYFVHLVNQGVILTIVYFSsqtfykegdyiirqgargdtffiiSKGKvkvtmkqpnsteEKYIRTLYkgdffgekalqgddlrtanivaadpegvscLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQvmnlddlrtanivaadpegvscLVIDQETFNQLISSLDEIRTKyvdetserrrapqiVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILrdkgnfddatTRFYTACVVEAFDYlhsrniiyrdlkpenlllstsgYVKLVDFgfakkligprys
Flexible Loop (DISEMBL)
MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIIskgkvkvtmkqpnsteeKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLissldeirtkyvdetserrrlneefrslrlsdlrvittlgvggfGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKyvdetserrrapqivetrqqqhimsekeimgeaNCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS
Low Complexity Region (SEG)
MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS
Disordered region (IsUnstruct)
*******KLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMK*****EEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD********NEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDP***FAL*******VMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV*************************EIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI*****
Disordered Region (DISOPRED)
***NPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPN*TEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISS**************************************************************************TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR**
Disordered Region (DISEMBL)
MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS
Disordered Region (DISPRO)
*****ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAG****SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSxxxxxxxxxxxxxxxxxxxxxFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	362	2.2.26 [Sep-21-2011]
Q03043	1088	cGMP-dependent protein ki	no	N/A	0.745	0.248	0.654	1e-116
P32023	934	cGMP-dependent protein ki	no	N/A	0.745	0.289	0.654	1e-116
P0C605	671	cGMP-dependent protein ki	yes	N/A	0.740	0.399	0.504	7e-84
P00516	671	cGMP-dependent protein ki	yes	N/A	0.740	0.399	0.504	8e-84
Q13976	671	cGMP-dependent protein ki	yes	N/A	0.740	0.399	0.504	1e-83
O77676	671	cGMP-dependent protein ki	yes	N/A	0.740	0.399	0.501	3e-82
O76360	780	cGMP-dependent protein ki	yes	N/A	0.754	0.35	0.443	1e-77
Q64595	762	cGMP-dependent protein ki	no	N/A	0.732	0.347	0.436	5e-74
Q61410	762	cGMP-dependent protein ki	no	N/A	0.732	0.347	0.433	1e-73
Q13237	762	cGMP-dependent protein ki	no	N/A	0.732	0.347	0.428	7e-73

>sp|Q03043|KGP24_DROME cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B OS=Drosophila melanogaster GN=for PE=1 SV=3

 Score =  419 bits (1076), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/327 (65%), Positives = 242/327 (74%), Gaps = 57/327 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ GDYI+RQGARGDTFFIISKGKV+VT+KQ ++ EEK+IR L KGDFFGEKALQGD
Sbjct: 656 ETHYQRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKALQGD 715

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS-ERRRLNEEFRSLRLS 149
           DLRTANI+    +GVSCLVID+ETFNQLIS+LDEI+ +Y DE + ERR++NEEFR + L+
Sbjct: 716 DLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLT 775

Query: 150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSC 209
           DLRVI TLGVGGFGRVELVQ  GD SRSFALKQMKKSQ++                    
Sbjct: 776 DLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIV-------------------- 815

Query: 210 LVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIV 269
                                      E R+   I+  ++         IMGEANC FIV
Sbjct: 816 ---------------------------ETRQQQHIMSEKE---------IMGEANCQFIV 839

Query: 270 KLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY 329
           KL+KTFKDKKYLYMLMESCLGGELWTILRDKGNFDD+TTRFYTACVVEAFDYLHSRNIIY
Sbjct: 840 KLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIY 899

Query: 330 RDLKPENLLLSTSGYVKLVDFGFAKKL 356
           RDLKPENLLL+  GYVKLVDFGFAKKL
Sbjct: 900 RDLKPENLLLNERGYVKLVDFGFAKKL 926

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 2

>sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 OS=Drosophila melanogaster GN=for PE=2 SV=3

 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/327 (65%), Positives = 242/327 (74%), Gaps = 57/327 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ GDYI+RQGARGDTFFIISKGKV+VT+KQ ++ EEK+IR L KGDFFGEKALQGD
Sbjct: 502 ETHYQRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKALQGD 561

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS-ERRRLNEEFRSLRLS 149
           DLRTANI+    +GVSCLVID+ETFNQLIS+LDEI+ +Y DE + ERR++NEEFR + L+
Sbjct: 562 DLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLT 621

Query: 150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSC 209
           DLRVI TLGVGGFGRVELVQ  GD SRSFALKQMKKSQ++                    
Sbjct: 622 DLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIV-------------------- 661

Query: 210 LVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIV 269
                                      E R+   I+  ++         IMGEANC FIV
Sbjct: 662 ---------------------------ETRQQQHIMSEKE---------IMGEANCQFIV 685

Query: 270 KLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY 329
           KL+KTFKDKKYLYMLMESCLGGELWTILRDKGNFDD+TTRFYTACVVEAFDYLHSRNIIY
Sbjct: 686 KLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIY 745

Query: 330 RDLKPENLLLSTSGYVKLVDFGFAKKL 356
           RDLKPENLLL+  GYVKLVDFGFAKKL
Sbjct: 746 RDLKPENLLLNERGYVKLVDFGFAKKL 772

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P0C605|KGP1_MOUSE cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1

 Score =  311 bits (796), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 166/329 (50%), Positives = 215/329 (65%), Gaps = 61/329 (18%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ G+YIIRQGARGDTFFIISKG+V VT +   S +  ++RTL KGD+FGEKALQG+
Sbjct: 239 ETHYENGEYIIRQGARGDTFFIISKGQVNVTREDSPSEDPVFLRTLGKGDWFGEKALQGE 298

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE---FRSLR 147
           D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +   E   F +L+
Sbjct: 299 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLK 356

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           LSD  +I TLGVGGFGRVELVQ+  + S++FA+K +KK  +++                 
Sbjct: 357 LSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDT---------------- 400

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                          R+   I   R ++ IM        A+ DF
Sbjct: 401 -------------------------------RQQEHI---RSEKQIMQ------GAHSDF 420

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F+D+TTRFYTACVVEAF YLHS+ I
Sbjct: 421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGI 480

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           IYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct: 481 IYRDLKPENLILDHRGYAKLVDFGFAKKI 509

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P00516|KGP1_BOVIN cGMP-dependent protein kinase 1 OS=Bos taurus GN=PRKG1 PE=1 SV=2

 Score =  310 bits (795), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 166/329 (50%), Positives = 215/329 (65%), Gaps = 61/329 (18%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ G+YIIRQGARGDTFFIISKGKV VT +   + +  ++RTL KGD+FGEKALQG+
Sbjct: 239 ETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGE 298

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE---FRSLR 147
           D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +   E   F +L+
Sbjct: 299 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLK 356

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           LSD  +I TLGVGGFGRVELVQ+  + S++FA+K +KK  +++                 
Sbjct: 357 LSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDT---------------- 400

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                          R+   I   R ++ IM        A+ DF
Sbjct: 401 -------------------------------RQQEHI---RSEKQIMQ------GAHSDF 420

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F+D+TTRFYTACVVEAF YLHS+ I
Sbjct: 421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGI 480

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           IYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct: 481 IYRDLKPENLILDHRGYAKLVDFGFAKKI 509

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q13976|KGP1_HUMAN cGMP-dependent protein kinase 1 OS=Homo sapiens GN=PRKG1 PE=1 SV=3

 Score =  310 bits (793), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 166/329 (50%), Positives = 214/329 (65%), Gaps = 61/329 (18%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ G+YIIRQGARGDTFFIISKG V VT +   S +  ++RTL KGD+FGEKALQG+
Sbjct: 239 ETHYENGEYIIRQGARGDTFFIISKGTVNVTREDSPSEDPVFLRTLGKGDWFGEKALQGE 298

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE---FRSLR 147
           D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +   E   F +L+
Sbjct: 299 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLK 356

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           LSD  +I TLGVGGFGRVELVQ+  + S++FA+K +KK  +++                 
Sbjct: 357 LSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDT---------------- 400

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                          R+   I   R ++ IM        A+ DF
Sbjct: 401 -------------------------------RQQEHI---RSEKQIMQ------GAHSDF 420

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F+D+TTRFYTACVVEAF YLHS+ I
Sbjct: 421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGI 480

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           IYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct: 481 IYRDLKPENLILDHRGYAKLVDFGFAKKI 509

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O77676|KGP1_RABIT cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1 PE=1 SV=3

 Score =  305 bits (782), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 165/329 (50%), Positives = 213/329 (64%), Gaps = 61/329 (18%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+  +Y IRQGARGDTFFIISKGKV VT +   S +  ++RTL KGD+FGEKALQG+
Sbjct: 239 ETHYENEEYSIRQGARGDTFFIISKGKVNVTREDSPSEDPIFLRTLGKGDWFGEKALQGE 298

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE---FRSLR 147
           D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +   E   F +L+
Sbjct: 299 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLK 356

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           LSD  +I TLGVGGFGRVELVQ+  + S++FA+K +KK  +++                 
Sbjct: 357 LSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDT---------------- 400

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                          R+   I   R ++ IM        A+ DF
Sbjct: 401 -------------------------------RQQEHI---RSEKQIMQ------GAHSDF 420

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F+D+TTRFYTACVVEAF YLHS+ I
Sbjct: 421 IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGI 480

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           IYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct: 481 IYRDLKPENLILDHRGYAKLVDFGFAKKI 509

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O76360|EGL4_CAEEL cGMP-dependent protein kinase egl-4 OS=Caenorhabditis elegans GN=egl-4 PE=1 SV=2

 Score =  290 bits (741), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/343 (44%), Positives = 207/343 (60%), Gaps = 70/343 (20%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           Q +Y  G YIIRQG +GD FF+I+ G+VKVT +    TE + IR L +GDFFGE+AL G+
Sbjct: 337 QDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEPREIRVLNQGDFFGERALLGE 396

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR------------- 137
           ++RTANI+A  P GV  L +D+E+F +LI  L+ ++  Y D+    +             
Sbjct: 397 EVRTANIIAQAP-GVEVLTLDRESFGKLIGDLESLKKDYGDKERLAQVVREPPSPVKIVD 455

Query: 138 RLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTA 197
              EEF  + L +++ + TLGVGGFGRVELV + GD +++F                   
Sbjct: 456 DFREEFAQVTLKNVKRLATLGVGGFGRVELVCVNGDKAKTF------------------- 496

Query: 198 NIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEK 257
                                    +L  ++ K+            IV+TRQQ+HI +E+
Sbjct: 497 -------------------------ALKALKKKH------------IVDTRQQEHIFAER 519

Query: 258 EIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE 317
            IM E + D+IVKLYKTF+D+K++YML+E CLGGELWT LRD+G+FDD T RFY ACV+E
Sbjct: 520 NIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVACVLE 579

Query: 318 AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
             +YLH +NI+YRDLKPEN LL+ +GY+KLVDFGFAKKL   R
Sbjct: 580 GLEYLHRKNIVYRDLKPENCLLANTGYLKLVDFGFAKKLASGR 622

Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q64595|KGP2_RAT cGMP-dependent protein kinase 2 OS=Rattus norvegicus GN=Prkg2 PE=2 SV=1

 Score =  278 bits (711), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/355 (43%), Positives = 205/355 (57%), Gaps = 90/355 (25%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
           +Y +GDYIIR+G  G TFFI++KGKVKVT       + + I+TL KG++FGEKAL  DD+
Sbjct: 306 YYDKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDV 365

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV-------DETSERRRLNEEFRS 145
           R+ANI+A + + V+CLVID+ETFNQ + + DE++ KY+       +   E+R       S
Sbjct: 366 RSANIIAEEND-VACLVIDRETFNQTVGTFDELQ-KYLEGYVATLNRDDEKRHAKRSMSS 423

Query: 146 LRLS------------------------DLRVITTLGVGGFGRVELVQIAGDPSRSFALK 181
            +LS                        +L +I TLGVGGFGRVELV++           
Sbjct: 424 WKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKV----------- 472

Query: 182 QMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
                        +  NI  A    + C+                             R 
Sbjct: 473 -------------KNENIAFA----MKCI-----------------------------RK 486

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
             IV+T+QQ+H+ SEK I+ E    FIVKLY+TFKD KY+YML+E+CLGGELW+ILRD+G
Sbjct: 487 KHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRG 546

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +FD+ T++F  ACV EAFDYLH   IIYRDLKPENL+L   GY+KLVDFGFAKK+
Sbjct: 547 SFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDADGYLKLVDFGFAKKI 601

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q61410|KGP2_MOUSE cGMP-dependent protein kinase 2 OS=Mus musculus GN=Prkg2 PE=2 SV=1

 Score =  277 bits (708), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/355 (43%), Positives = 205/355 (57%), Gaps = 90/355 (25%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
           +Y +GDYIIR+G  G TFFI++KGKVKVT       + + I+TL KG++FGEKAL  DD+
Sbjct: 306 YYDKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDV 365

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV-------DETSERRRLNEEFRS 145
           R+ANI+A + + V+CLVID+ETFNQ + + DE++ KY+       +   E+R       S
Sbjct: 366 RSANIIAEEND-VACLVIDRETFNQTVGTFDELQ-KYLEGYVATLNRDDEKRHAKRSMSS 423

Query: 146 LRLS------------------------DLRVITTLGVGGFGRVELVQIAGDPSRSFALK 181
            +LS                        +L +I TLGVGGFGRVELV++           
Sbjct: 424 WKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKV----------- 472

Query: 182 QMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
                        +  N+  A    + C+                             R 
Sbjct: 473 -------------KNENVAFA----MKCI-----------------------------RK 486

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
             IV+T+QQ+H+ SEK I+ E    FIVKLY+TFKD KY+YML+E+CLGGELW+ILRD+G
Sbjct: 487 KHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRG 546

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +FD+ T++F  ACV EAFDYLH   IIYRDLKPENL+L   GY+KLVDFGFAKK+
Sbjct: 547 SFDEPTSKFCVACVTEAFDYLHLLGIIYRDLKPENLILDADGYLKLVDFGFAKKI 601

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q13237|KGP2_HUMAN cGMP-dependent protein kinase 2 OS=Homo sapiens GN=PRKG2 PE=1 SV=1

 Score =  274 bits (701), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 152/355 (42%), Positives = 205/355 (57%), Gaps = 90/355 (25%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
           +Y +GDYIIR+G  G TFFI++KGKVKVT       + + I+TL KG++FGEKAL  DD+
Sbjct: 306 YYDKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDV 365

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV-------DETSERRRLNEEFRS 145
           R+ANI+A + + V+CLVID+ETFNQ + + +E++ KY+       +   E+R       +
Sbjct: 366 RSANIIAEEND-VACLVIDRETFNQTVGTFEELQ-KYLEGYVANLNRDDEKRHAKRSMSN 423

Query: 146 LRLS------------------------DLRVITTLGVGGFGRVELVQIAGDPSRSFALK 181
            +LS                        +L +I TLGVGGFGRVELV++           
Sbjct: 424 WKLSKALSLEMIQLKEKVARFSSSSPFQNLEIIATLGVGGFGRVELVKV----------- 472

Query: 182 QMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
                        +  N+  A    + C+                             R 
Sbjct: 473 -------------KNENVAFA----MKCI-----------------------------RK 486

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
             IV+T+QQ+H+ SEK I+ E    FIVKLY+TFKD KY+YML+E+CLGGELW+ILRD+G
Sbjct: 487 KHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRG 546

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +FD+ T++F  ACV EAFDYLH   IIYRDLKPENL+L   GY+KLVDFGFAKK+
Sbjct: 547 SFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDAEGYLKLVDFGFAKKI 601

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
402502111	634	cGMP-dependent protein kinase, partial [	0.745	0.425	0.702	1e-126
340723955	722	PREDICTED: cGMP-dependent protein kinase	0.745	0.373	0.677	1e-121
225618775	668	cGMP dependent protein kinase [Bombus ig	0.745	0.404	0.677	1e-121
350422649	668	PREDICTED: cGMP-dependent protein kinase	0.745	0.404	0.677	1e-121
239946290	668	cGMP-dependent protein kinase foraging [	0.745	0.404	0.677	1e-121
158147011	674	cGMP-dependent protein kinase 1 foraging	0.745	0.400	0.677	1e-120
242009000	542	cAMP-dependent protein kinase catalytic	0.745	0.498	0.665	1e-120
383857827	721	PREDICTED: cGMP-dependent protein kinase	0.745	0.374	0.677	1e-120
307211418	470	cGMP-dependent protein kinase, isozyme 2	0.745	0.574	0.668	1e-120
380021437	674	PREDICTED: cGMP-dependent protein kinase	0.745	0.400	0.677	1e-120

>gi|402502111|gb|ADP94162.2| cGMP-dependent protein kinase, partial [Schistocerca gregaria]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/326 (70%), Positives = 253/326 (77%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T+Y EGDYIIRQGARGDTFFIISKG+VKVTMKQPNS EEKY+RTL+KGDFFGEKALQGD
Sbjct: 203 ETYYNEGDYIIRQGARGDTFFIISKGQVKVTMKQPNSLEEKYVRTLHKGDFFGEKALQGD 262

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A+DPEGV+CLVID+ETFNQLISSLDEIRT+Y DE  ERRR++EEFR ++LSD
Sbjct: 263 DLRTANIIASDPEGVTCLVIDRETFNQLISSLDEIRTRYKDEGVERRRIDEEFRDVKLSD 322

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LRV+ TLGVGGFGRVELVQIAGDP RSFALKQMKKSQ++                     
Sbjct: 323 LRVLATLGVGGFGRVELVQIAGDPLRSFALKQMKKSQIV--------------------- 361

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  +         EIMGEANC+FIVK
Sbjct: 362 --------------------------ETRQQQHIMSEK---------EIMGEANCNFIVK 386

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           LYKTFKD+KYLYMLMESCLGGELWTILRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 387 LYKTFKDRKYLYMLMESCLGGELWTILRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 446

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL  +GYVKLVDFGFAKKL
Sbjct: 447 DLKPENLLLDNAGYVKLVDFGFAKKL 472

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723955|ref|XP_003400352.1| PREDICTED: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B [Bombus terrestris]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 247/326 (75%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIISKG+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 291 ETFYNNGDYIIRQGARGDTFFIISKGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGD 350

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 351 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 410

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQI GD SRSFALKQMKK+Q++                     
Sbjct: 411 LRPLATLGVGGFGRVELVQIVGDSSRSFALKQMKKAQIV--------------------- 449

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IMGEA+CDF+VK
Sbjct: 450 --------------------------ETRQQQHIMSEKR---------IMGEADCDFVVK 474

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 475 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 534

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 535 DLKPENLLLDSQGYVKLVDFGFAKRL 560

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|225618775|dbj|BAH29963.1| cGMP dependent protein kinase [Bombus ignitus]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 247/326 (75%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIISKG+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 237 ETFYNNGDYIIRQGARGDTFFIISKGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGD 296

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 297 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 356

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQI GD SRSFALKQMKK+Q++                     
Sbjct: 357 LRPLATLGVGGFGRVELVQIVGDSSRSFALKQMKKAQIV--------------------- 395

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IMGEA+CDF+VK
Sbjct: 396 --------------------------ETRQQQHIMSEKR---------IMGEADCDFVVK 420

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 421 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 480

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 481 DLKPENLLLDSQGYVKLVDFGFAKRL 506

Source: Bombus ignitus

Species: Bombus ignitus

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422649|ref|XP_003493238.1| PREDICTED: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B-like [Bombus impatiens]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 247/326 (75%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIISKG+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 237 ETFYNNGDYIIRQGARGDTFFIISKGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGD 296

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 297 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 356

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQI GD SRSFALKQMKK+Q++                     
Sbjct: 357 LRPLATLGVGGFGRVELVQIVGDSSRSFALKQMKKAQIV--------------------- 395

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IMGEA+CDF+VK
Sbjct: 396 --------------------------ETRQQQHIMSEKR---------IMGEADCDFVVK 420

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 421 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 480

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 481 DLKPENLLLDSQGYVKLVDFGFAKRL 506

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239946290|gb|ACS36224.1| cGMP-dependent protein kinase foraging [Bombus terrestris]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 247/326 (75%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIISKG+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 237 ETFYNNGDYIIRQGARGDTFFIISKGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGD 296

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 297 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 356

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQI GD SRSFALKQMKK+Q++                     
Sbjct: 357 LRPLATLGVGGFGRVELVQIVGDSSRSFALKQMKKAQIV--------------------- 395

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IMGEA+CDF+VK
Sbjct: 396 --------------------------ETRQQQHIMSEKR---------IMGEADCDFVVK 420

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 421 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 480

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 481 DLKPENLLLDSQGYVKLVDFGFAKRL 506

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158147011|gb|ABW22623.1| cGMP-dependent protein kinase 1 foraging [Pheidole pallidula]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 246/326 (75%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIIS+G+V+VT+KQP++TEEKYIRTL KGDFFGEKALQGD
Sbjct: 243 ETFYNNGDYIIRQGARGDTFFIISRGQVRVTIKQPDTTEEKYIRTLRKGDFFGEKALQGD 302

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR +RL D
Sbjct: 303 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYRDELVERRRLNEEFRDVRLQD 362

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR I TLGVGGFGRVELVQIAGD +RSFALKQMKKSQ++                     
Sbjct: 363 LRTIATLGVGGFGRVELVQIAGDSTRSFALKQMKKSQIV--------------------- 401

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IM EA+CDF+VK
Sbjct: 402 --------------------------ETRQQQHIMSEKR---------IMSEADCDFVVK 426

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 427 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGYFDDGTTRFYTACVVEAFDYLHSRNIIYR 486

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL   GYVKLVDFGFAK+L
Sbjct: 487 DLKPENLLLDNQGYVKLVDFGFAKRL 512

Source: Pheidole pallidula

Species: Pheidole pallidula

Genus: Pheidole

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009000|ref|XP_002425281.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis] gi|212509046|gb|EEB12543.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/338 (66%), Positives = 249/338 (73%), Gaps = 68/338 (20%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           + +Y +GDYIIRQGARGDTFFIISKG+VKVT+KQPN++EEKYIRTL KGDFFGEKALQGD
Sbjct: 99  EAYYNQGDYIIRQGARGDTFFIISKGEVKVTIKQPNTSEEKYIRTLGKGDFFGEKALQGD 158

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR------------ 138
           DLRTANI+A DPEGV+CLVID+E+FNQLIS LDEIRTKY DE  ERR             
Sbjct: 159 DLRTANIIANDPEGVTCLVIDRESFNQLISGLDEIRTKYADEGIERRNVNETRWVRLINV 218

Query: 139 LNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTAN 198
           +NEEFR L+LSDLR++ TLGVGGFGRVELVQIAGD +RSFALKQMKKSQ++         
Sbjct: 219 VNEEFRDLKLSDLRILATLGVGGFGRVELVQIAGDCTRSFALKQMKKSQIV--------- 269

Query: 199 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKE 258
                                                 E R+   I+         SEK+
Sbjct: 270 --------------------------------------ETRQQQHIM---------SEKD 282

Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           IM EANCDFIVKLYKTFKD+KYLYMLMESCLGGELWTILRDKG+FDD+TTRFYTACVV A
Sbjct: 283 IMSEANCDFIVKLYKTFKDRKYLYMLMESCLGGELWTILRDKGHFDDSTTRFYTACVVSA 342

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FDYLHSRNIIYRDLKPENLLL   GYVKLVDFGFAKKL
Sbjct: 343 FDYLHSRNIIYRDLKPENLLLDVQGYVKLVDFGFAKKL 380

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857827|ref|XP_003704405.1| PREDICTED: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B-like [Megachile rotundata]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 248/326 (76%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIIS+G+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 290 ETFYNNGDYIIRQGARGDTFFIISRGQVRVTIKQPDTPEEKYIRTLGKGDFFGEKALQGD 349

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 350 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 409

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQIAGD +RSFALKQMKK+Q++                     
Sbjct: 410 LRPLATLGVGGFGRVELVQIAGDGTRSFALKQMKKAQIV--------------------- 448

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+    ++ IM      GEA+CDFIVK
Sbjct: 449 --------------------------ETRQQQHIM---SEKRIM------GEADCDFIVK 473

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 474 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 533

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 534 DLKPENLLLDSQGYVKLVDFGFAKRL 559

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211418|gb|EFN87545.1| cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 [Harpegnathos saltator]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/326 (66%), Positives = 249/326 (76%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYI+RQGARGDTFFIIS+G+V+VT+KQP++TEEKYIRTL +GDFFGEKALQGD
Sbjct: 39  ETFYNNGDYIVRQGARGDTFFIISRGQVRVTIKQPDTTEEKYIRTLGRGDFFGEKALQGD 98

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 99  DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 158

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQI GD +RSFALKQMKK+Q++                     
Sbjct: 159 LRALATLGVGGFGRVELVQIIGDNTRSFALKQMKKAQIV--------------------- 197

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+  ++         IMGEA+CDF+VK
Sbjct: 198 --------------------------ETRQQQHIMSEKR---------IMGEADCDFVVK 222

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD+TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 223 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDSTTRFYTACVVEAFDYLHSRNIIYR 282

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 283 DLKPENLLLDSQGYVKLVDFGFAKRL 308

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021437|ref|XP_003694572.1| PREDICTED: cGMP-dependent protein kinase, isozyme 2 forms cD5/T2-like [Apis florea]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 248/326 (76%), Gaps = 56/326 (17%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +TFY  GDYIIRQGARGDTFFIIS+G+V+VT+KQP++ EEKYIRTL KGDFFGEKALQGD
Sbjct: 243 ETFYNNGDYIIRQGARGDTFFIISRGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGD 302

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSD 150
           DLRTANI+A DPEGVSCLVID+ETFNQLISSLDEIRT+Y DE  ERRRLNEEFR LRL D
Sbjct: 303 DLRTANIIADDPEGVSCLVIDRETFNQLISSLDEIRTRYKDELVERRRLNEEFRDLRLQD 362

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
           LR + TLGVGGFGRVELVQIAGD SRSFALKQMKK+Q++                     
Sbjct: 363 LRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIV--------------------- 401

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
                                     E R+   I+    ++ IM      GEA+CDF+VK
Sbjct: 402 --------------------------ETRQQQHIM---SEKRIM------GEADCDFVVK 426

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L+KTFKD+KYLYMLME+CLGGELWT+LRDKG+FDD TTRFYTACVVEAFDYLHSRNIIYR
Sbjct: 427 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYR 486

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKL 356
           DLKPENLLL + GYVKLVDFGFAK+L
Sbjct: 487 DLKPENLLLDSQGYVKLVDFGFAKRL 512

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
FB|FBgn0000721	1088	for "foraging" [Drosophila mel	0.439	0.146	0.743	3.6e-116
RGD|1587390	459	Prkg1 "protein kinase, cGMP-de	0.312	0.246	0.778	8e-91
UNIPROTKB|F1SD02	459	PRKG1 "Uncharacterized protein	0.312	0.246	0.778	1e-90
UNIPROTKB|P00516	671	PRKG1 "cGMP-dependent protein	0.312	0.168	0.778	1.7e-90
UNIPROTKB|F1MY76	686	PRKG1 "cGMP-dependent protein	0.312	0.164	0.778	1.9e-90
MGI|MGI:108174	671	Prkg1 "protein kinase, cGMP-de	0.312	0.168	0.778	2.1e-90
UNIPROTKB|Q13976	671	PRKG1 "cGMP-dependent protein	0.312	0.168	0.778	3.4e-90
UNIPROTKB|Q5SQU3	659	PRKG1 "cGMP-dependent protein	0.312	0.171	0.778	3.4e-90
UNIPROTKB|F1NE85	685	F1NE85 "cGMP-dependent protein	0.312	0.164	0.778	7.1e-90
UNIPROTKB|J9JHE0	489	PRKG1 "Uncharacterized protein	0.312	0.231	0.778	7.1e-90

FB|FBgn0000721 for "foraging" [Drosophila melanogaster (taxid:7227)]

 Score = 609 (219.4 bits), Expect = 3.6e-116, Sum P(2) = 3.6e-116
 Identities = 119/160 (74%), Positives = 140/160 (87%)

Query:    31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
             +T Y+ GDYI+RQGARGDTFFIISKGKV+VT+KQ ++ EEK+IR L KGDFFGEKALQGD
Sbjct:   656 ETHYQRGDYIVRQGARGDTFFIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKALQGD 715

Query:    91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS-ERRRLNEEFRSLRLS 149
             DLRTANI+    +GVSCLVID+ETFNQLIS+LDEI+ +Y DE + ERR++NEEFR + L+
Sbjct:   716 DLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLT 775

Query:   150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVM 189
             DLRVI TLGVGGFGRVELVQ  GD SRSFALKQMKKSQ++
Sbjct:   776 DLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIV 815

GO:0004690 "cyclic nucleotide-dependent protein kinase activity" evidence=ISS

GO:0030536 "larval feeding behavior" evidence=IMP;TAS

GO:0004692 "cGMP-dependent protein kinase activity" evidence=NAS;IDA

GO:0006468 "protein phosphorylation" evidence=NAS;IDA

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0046959 "habituation" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0007631 "feeding behavior" evidence=TAS

GO:0008016 "regulation of heart contraction" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=IDA

GO:0007616 "long-term memory" evidence=IMP

GO:0007614 "short-term memory" evidence=IMP

GO:0032095 "regulation of response to food" evidence=IMP

RGD|1587390 Prkg1 "protein kinase, cGMP-dependent, type 1" [Rattus norvegicus (taxid:10116)]

 Score = 479 (173.7 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   185 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 244

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   245 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 297

GO:0001764 "neuron migration" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA;ISO

GO:0005246 "calcium channel regulator activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016358 "dendrite development" evidence=ISO

GO:0030553 "cGMP binding" evidence=ISO

GO:0030900 "forebrain development" evidence=ISO

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0090331 "negative regulation of platelet aggregation" evidence=ISO

UNIPROTKB|F1SD02 PRKG1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 479 (173.7 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   185 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 244

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   245 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 297

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P00516 PRKG1 "cGMP-dependent protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 479 (173.7 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   397 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 456

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   457 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 509

GO:0005829 "cytosol" evidence=TAS

GO:0043087 "regulation of GTPase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005246 "calcium channel regulator activity" evidence=ISS

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISS

GO:0090331 "negative regulation of platelet aggregation" evidence=ISS

GO:0030553 "cGMP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1MY76 PRKG1 "cGMP-dependent protein kinase" [Bos taurus (taxid:9913)]

 Score = 479 (173.7 bits), Expect = 1.9e-90, Sum P(2) = 1.9e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   412 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 471

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   472 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 524

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:108174 Prkg1 "protein kinase, cGMP-dependent, type I" [Mus musculus (taxid:10090)]

 Score = 479 (173.7 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   397 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 456

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   457 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 509

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IMP

GO:0003824 "catalytic activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISO;IDA

GO:0005246 "calcium channel regulator activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA;IMP

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0007165 "signal transduction" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016358 "dendrite development" evidence=IMP

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030553 "cGMP binding" evidence=IDA

GO:0030900 "forebrain development" evidence=IMP

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0090331 "negative regulation of platelet aggregation" evidence=ISO

UNIPROTKB|Q13976 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 479 (173.7 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   397 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 456

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   457 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 509

GO:0005524 "ATP binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005246 "calcium channel regulator activity" evidence=IDA

GO:0090331 "negative regulation of platelet aggregation" evidence=IMP

GO:0043087 "regulation of GTPase activity" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

UNIPROTKB|Q5SQU3 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 479 (173.7 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   385 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 444

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   445 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 497

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NE85 F1NE85 "cGMP-dependent protein kinase" [Gallus gallus (taxid:9031)]

 Score = 481 (174.4 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
 Identities = 88/113 (77%), Positives = 102/113 (90%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME+CLGGELWTILRD+G+F
Sbjct:   411 IVDTRQQEHIRSEKQIMQSAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSF 470

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   471 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKI 523

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

UNIPROTKB|J9JHE0 PRKG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 476 (172.6 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
 Identities = 88/113 (77%), Positives = 101/113 (89%)

Query:   244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
             IV+TRQQ+HI SEK+IM  A+ DFIV+LY+TFKD KYLYMLME CLGGELWTILRD+G+F
Sbjct:   215 IVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEVCLGGELWTILRDRGSF 274

Query:   304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +D+TTRFYTACVVEAF YLHS+ IIYRDLKPENL+L   GY KLVDFGFAKK+
Sbjct:   275 EDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYTKLVDFGFAKKI 327

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P00516	KGP1_BOVIN	2, ., 7, ., 1, 1, ., 1, 2	0.5045	0.7403	0.3994	yes	N/A
O77676	KGP1_RABIT	2, ., 7, ., 1, 1, ., 1, 2	0.5015	0.7403	0.3994	yes	N/A
P0C605	KGP1_MOUSE	2, ., 7, ., 1, 1, ., 1, 2	0.5045	0.7403	0.3994	yes	N/A
Q13976	KGP1_HUMAN	2, ., 7, ., 1, 1, ., 1, 2	0.5045	0.7403	0.3994	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	362
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-74
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-57
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-48
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-44
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-41
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-39
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-37
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	7e-37
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-36
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	7e-36
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-32
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-31
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-31
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-28
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-28
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-28
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-26
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-25
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-25
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	6e-25
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-24
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-24
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-24
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-24
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-24
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	7e-24
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-24
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	8e-24
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	9e-24
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-23
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-23
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-23
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-22
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-22
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-22
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-22
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-22
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-22
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-22
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-21
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-21
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-21
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-20
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-20
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-20
cd00038	115	cd00038, CAP_ED, effector domain of the CAP family	4e-20
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-20
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-19
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-19
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	9e-19
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-18
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-18
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-18
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-18
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-18
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-18
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-18
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-18
pfam00027	91	pfam00027, cNMP_binding, Cyclic nucleotide-binding	9e-18
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-17
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-17
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-17
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	8e-17
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	9e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-16
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-16
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-16
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-16
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-16
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-16
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-16
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-15
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-15
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-15
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-15
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-15
smart00100	120	smart00100, cNMP, Cyclic nucleotide-monophosphate	3e-15
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	7e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-14
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-14
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-14
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-14
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-14
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	8e-14
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	9e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-13
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-13
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-13
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	6e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-13
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-13
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-13
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-13
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	7e-13
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-13
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-12
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-12
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-12
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-12
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-12
COG0664	214	COG0664, Crp, cAMP-binding proteins - catabolite g	2e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-12
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-12
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-12
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-12
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	7e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-11
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-11
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-11
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-11
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-11
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	6e-11
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	8e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-10
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-10
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-10
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-10
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-10
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	8e-10
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-10
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-09
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-09
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-09
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-09
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-09
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-09
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	8e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	9e-09
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-08
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-08
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-08
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-08
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-08
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-08
PLN02868	413	PLN02868, PLN02868, acyl-CoA thioesterase family p	3e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-08
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-08
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-08
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-07
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-07
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	3e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	6e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	8e-07
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	9e-07
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-06
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-06
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	5e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	6e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	6e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	8e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	7e-05
PRK11753	211	PRK11753, PRK11753, DNA-binding transcriptional du	7e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-04
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	1e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	5e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	6e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	9e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.001
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.001
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	0.001
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.001
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.001
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.002
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	0.002
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.002
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.003
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.004

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  230 bits (588), Expect = 4e-74
 Identities = 89/114 (78%), Positives = 99/114 (86%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            IVET QQ+HI SEKEI+ E N  FIVKLY+TFKDKKY+YMLME CLGGELWTILRD+G 
Sbjct: 30  HIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL 89

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+ T RFY ACVV AF+YLH+R IIYRDLKPENLLL ++GYVKLVDFGFAKKL
Sbjct: 90  FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKL 143

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  187 bits (477), Expect = 4e-57
 Identities = 72/208 (34%), Positives = 102/208 (49%), Gaps = 57/208 (27%)

Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            D   I TLG G FGRV LV+      + +ALK + K+++                    
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRH-KGSGKYYALKILSKAKI-------------------- 39

Query: 209 CLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
                             ++ K                  Q +H+++EK I+      F+
Sbjct: 40  ------------------VKLK------------------QVEHVLNEKRILQSIRHPFL 63

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           V LY +F+D   LY++ME   GGEL++ LR  G F +   RFY A VV A +YLHS +I+
Sbjct: 64  VNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIV 123

Query: 329 YRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           YRDLKPENLLL + GY+K+ DFGFAK++
Sbjct: 124 YRDLKPENLLLDSDGYIKITDFGFAKRV 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  163 bits (414), Expect = 3e-48
 Identities = 52/114 (45%), Positives = 78/114 (68%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           I++ ++ +H ++E+ I+   N  FIVKL+  F+ ++ LY+++E   GGEL++ L  +G F
Sbjct: 31  IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRF 90

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A +YLHS  IIYRDLKPEN+LL   G++KL DFG AK+L 
Sbjct: 91  SEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELS 144

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  154 bits (391), Expect = 2e-44
 Identities = 75/211 (35%), Positives = 109/211 (51%), Gaps = 61/211 (28%)

Query: 149 SDLRVITTLGVGGFGRVELVQ--IAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEG 206
            DL  I T+G G FGRV LV+  I+      +ALK      VM +               
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISE---HYYALK------VMAI--------------- 36

Query: 207 VSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD 266
                                              P+++  +Q+QH+ +EK ++ E +  
Sbjct: 37  -----------------------------------PEVIRLKQEQHVHNEKRVLKEVSHP 61

Query: 267 FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           FI++L+ T  D+++LYMLME   GGEL++ LR+ G F ++T  FY + +V A +YLHS+ 
Sbjct: 62  FIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE 121

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           I+YRDLKPEN+LL   G++KL DFGFAKKL 
Sbjct: 122 IVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  143 bits (364), Expect = 8e-41
 Identities = 46/111 (41%), Positives = 74/111 (66%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
             + ++ I+ E +I+ +     IV+LY  F+D+  LY++ME C GG+L+ +L+ +G   +
Sbjct: 37  IKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSE 96

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              RFY   ++ A +YLHS+ I++RDLKPEN+LL   G+VKL DFG A++L
Sbjct: 97  DEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQL 147

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  142 bits (360), Expect = 1e-39
 Identities = 74/216 (34%), Positives = 106/216 (49%), Gaps = 57/216 (26%)

Query: 141 EEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIV 200
            +  S +LSD  +  TLG G FGRV + +  G     +A+K +KK ++            
Sbjct: 10  PDTSSWKLSDFEMGETLGTGSFGRVRIAKHKGT-GEYYAIKCLKKREI------------ 56

Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
                                     ++ K V                   H+  EK I+
Sbjct: 57  --------------------------LKMKQVQ------------------HVAQEKSIL 72

Query: 261 GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFD 320
            E +  FIV +  +F+D+  +Y L+E  +GGEL+T LR  G F +   +FY A +V AF+
Sbjct: 73  MELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE 132

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           YLHS++IIYRDLKPENLLL   G+VK+ DFGFAKK+
Sbjct: 133 YLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV 168

Length = 329

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  135 bits (341), Expect = 2e-37
 Identities = 46/107 (42%), Positives = 76/107 (71%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
            Q   +++E++I+ +A   ++VKLY +F+ KK LY++ME   GG+L ++L + G+ D+  
Sbjct: 35  NQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDV 94

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            R Y A +V A +YLHS  II+RDLKP+N+L+ ++G++KL DFG +K
Sbjct: 95  ARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  133 bits (338), Expect = 7e-37
 Identities = 48/113 (42%), Positives = 76/113 (67%), Gaps = 1/113 (0%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCD-FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           Q+++ ++ +++  EKE++   N    I+KLY TF+D++ LY ++E    GEL   +R  G
Sbjct: 38  QLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG 97

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           + D+  TRFY A ++ A +YLHS+ II+RDLKPEN+LL    ++K+ DFG AK
Sbjct: 98  SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAK 150

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  131 bits (332), Expect = 4e-36
 Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 58/209 (27%)

Query: 151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCL 210
             ++  LG G FG V   +  G      A+K +KK                         
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKI-VAVKILKK------------------------- 34

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
               E   +  ++  EIR                              I+   +   IV+
Sbjct: 35  --RSEKSKKDQTARREIR------------------------------ILRRLSHPNIVR 62

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L   F+DK +LY++ME C GG+L+  L   G   +   +     ++   +YLHS  II+R
Sbjct: 63  LIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHR 122

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           DLKPEN+LL  +G VK+ DFG AKKL+  
Sbjct: 123 DLKPENILLDENGVVKIADFGLAKKLLKS 151

Length = 260

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  133 bits (336), Expect = 7e-36
 Identities = 46/115 (40%), Positives = 77/115 (66%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            +++  Q  H+ +E++I+ +A+  +IVKLY +F+D+++LY++ME   GG+L  +L  K  
Sbjct: 38  DMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDV 97

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           F + T RFY A +V A D +H    I+RD+KP+N+L+   G++KL DFG  KK+ 
Sbjct: 98  FPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  122 bits (307), Expect = 2e-32
 Identities = 41/113 (36%), Positives = 73/113 (64%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
            VE    +++++E+ I+ E N  F+V L+ +F+D++ +Y++++  LGG+L   L  K  F
Sbjct: 38  CVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKF 97

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   +F+   +V A +YLHS+ II+RD+KP+N+LL   G+V + DF  A K+
Sbjct: 98  SEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKV 150

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  122 bits (306), Expect = 1e-31
 Identities = 79/238 (33%), Positives = 111/238 (46%), Gaps = 60/238 (25%)

Query: 117 QLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSR 176
           Q + +L   + K  D T E +R N+    ++  D   I TLG G FGRV L     +   
Sbjct: 2   QFLKNLQLHKKKDSDSTKEPKRKNK----MKYEDFNFIRTLGTGSFGRVILATYKNEDFP 57

Query: 177 SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS 236
             A+K+ +KS++                                      I+ K VD   
Sbjct: 58  PVAIKRFEKSKI--------------------------------------IKQKQVD--- 76

Query: 237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
                          H+ SE++I+   N  F V LY +FKD+ YLY+++E  +GGE +T 
Sbjct: 77  ---------------HVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTF 121

Query: 297 LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           LR    F +    FY A +V  F+YL S NI+YRDLKPENLLL   G++K+ DFGFAK
Sbjct: 122 LRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179

Length = 340

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  120 bits (304), Expect = 2e-31
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 57/214 (26%)

Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            D +++T +G GG+G+V L +   D     ALK+MKK                       
Sbjct: 1   KDFQILTQVGQGGYGQVFLAK-KKDTGEIVALKRMKK----------------------- 36

Query: 209 CLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
                      L+  L+E+R                       H+++E++I+     +++
Sbjct: 37  ----------SLLFKLNEVR-----------------------HVLTERDILTTTKSEWL 63

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           VKL   F+D +YLY+ ME   GG+  T+L + G   +   RFY A + EA D LH    I
Sbjct: 64  VKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYI 123

Query: 329 YRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +RDLKPEN L+  SG++KL DFG +K ++    S
Sbjct: 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS 157

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  113 bits (286), Expect = 1e-28
 Identities = 49/117 (41%), Positives = 76/117 (64%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R  +++E  Q  H+ +E++I+ EA+  ++VKLY +F+D+ YLY++ME   GG++ T+L  
Sbjct: 35  RKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           K  F +  TRFY A  + A D +H    I+RD+KP+NLLL   G++KL DFG    L
Sbjct: 95  KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  111 bits (281), Expect = 3e-28
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 59/210 (28%)

Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
              + I  LG G  GRV LV++ G   + FALK                           
Sbjct: 1   KHFKKIKLLGKGDVGRVFLVRLKGT-GKLFALK--------------------------- 32

Query: 209 CLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
             V+D++                           ++++  + + +++E+EI+   +  F+
Sbjct: 33  --VLDKK---------------------------EMIKRNKVKRVLTEQEILATLDHPFL 63

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTIL--RDKGNFDDATTRFYTACVVEAFDYLHSRN 326
             LY +F+ + YL ++M+ C GGEL+ +L  +      +   RFY A V+ A +YLH   
Sbjct: 64  PTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG 123

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           I+YRDLKPEN+LL  SG++ L DF  +K+ 
Sbjct: 124 IVYRDLKPENILLHESGHIMLSDFDLSKQS 153

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  109 bits (276), Expect = 5e-28
 Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 2/106 (1%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTF--KDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           +  E  I+       IV+ Y +   ++K  L + +E   GG L ++L+  G   +   R 
Sbjct: 46  LEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRK 105

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           YT  ++E   YLHS  I++RD+K  N+L+ + G VKL DFG AK+L
Sbjct: 106 YTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRL 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  103 bits (260), Expect = 3e-26
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 6/133 (4%)

Query: 230 KYVDETSERRRA----PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
              D+ + ++ A     +   +   + ++ E EI+ + N   IVKLY  F+D+ +LY++M
Sbjct: 11  LARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVM 70

Query: 286 ESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSG 343
           E C GG L  +L++  G   +         ++E  +YLHS  II+RDLKPEN+LL S +G
Sbjct: 71  EYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG 130

Query: 344 YVKLVDFGFAKKL 356
            VKL DFG +K L
Sbjct: 131 KVKLADFGLSKLL 143

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 1e-25
 Identities = 48/115 (41%), Positives = 72/115 (62%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   IV   +  H ++E+ ++ + NC FIV L  +F+  + LY+++    GGEL+  L+ 
Sbjct: 27  RKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR 86

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +G FD +  RFYTA ++ A + LH  N+IYRDLKPEN+LL   G++ L DFG  K
Sbjct: 87  EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCK 141

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  104 bits (262), Expect = 2e-25
 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 6/121 (4%)

Query: 244 IVETRQQQHIMSEKEIMGEANCD---FIVKLYKTFKDKKYLYMLMESCLGGEL-WTILRD 299
           I+   + + +M EK I   AN +   F+V L+  F+ + ++  +ME   GG+L   I  D
Sbjct: 37  IIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD 96

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
              F +    FY ACVV    YLH   I+YRDLK +NLLL T G+VK+ DFG  K+ +G 
Sbjct: 97  V--FSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154

Query: 360 R 360
            
Sbjct: 155 G 155

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  103 bits (259), Expect = 6e-25
 Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 5/98 (5%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFYTA 313
           E++IM  AN ++IV+L+  F+D KYLYM+ME   GG+L  ++    N+D  +   RFYTA
Sbjct: 93  ERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM---SNYDIPEKWARFYTA 149

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
            VV A D +HS   I+RD+KP+N+LL  SG++KL DFG
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 187

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  101 bits (254), Expect = 1e-24
 Identities = 48/117 (41%), Positives = 74/117 (63%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           I++ ++Q+HIM+E+ ++       F+V L+ +F+    LY +++   GGEL+  L+ + +
Sbjct: 33  ILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERS 92

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           F +   RFY A +  A  YLHS NIIYRDLKPEN+LL + G+V L DFG  K+ I  
Sbjct: 93  FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH 149

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 99.9 bits (249), Expect = 2e-24
 Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 8/126 (6%)

Query: 244 IVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++   Q  ++ +E+ I M +    ++ KLY +F+ K YLY++ME   GG+  ++++  G 
Sbjct: 34  MIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGG 93

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA------KKL 356
             +   + Y A VV   + LH R II+RD+KPENLL+  +G++KL DFG +      KK 
Sbjct: 94  LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKF 153

Query: 357 IG-PRY 361
           +G P Y
Sbjct: 154 VGTPDY 159

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  101 bits (253), Expect = 2e-24
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%)

Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M+EK ++  A    F+ +L+  F+ K  L+ +ME   GG+L   ++  G FD+   RFY 
Sbjct: 43  MTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYA 102

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           A +V    +LH R IIYRDLK +N+LL + G++K+ DFG  K+ I   
Sbjct: 103 AEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG 150

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  101 bits (254), Expect = 3e-24
 Identities = 41/112 (36%), Positives = 72/112 (64%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   ++   Q  H+ +E++I+ EA+ +++VKLY +F+DK  LY +M+   GG++ ++L  
Sbjct: 35  RKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
            G F++   RFY A +  A + +H    I+RD+KP+N+L+   G++KL DFG
Sbjct: 95  LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 146

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 98.4 bits (246), Expect = 6e-24
 Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN- 302
           +    +++ I++E +I+ +     IVK Y ++  K  L+++ME C GG L  +L+     
Sbjct: 35  LESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQT 94

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++   +    +++  +YLHS  II+RD+K  N+LL++ G VKL+DFG + +L
Sbjct: 95  LTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 99.1 bits (247), Expect = 7e-24
 Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 3/123 (2%)

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEA--NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
           ++A  + + +  +H  +E++++ EA   C F+V L+  F+    L+++++   GGEL+T 
Sbjct: 37  KKATIVQKAKTAEHTRTERQVL-EAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTH 95

Query: 297 LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           L  + +F ++  R Y A +V A D+LH   IIYRD+K EN+LL + G+V L DFG +K+ 
Sbjct: 96  LYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155

Query: 357 IGP 359
           +  
Sbjct: 156 LAE 158

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score =  100 bits (249), Expect = 7e-24
 Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           I++ ++Q HIM+E+ ++       F+V L+ +F+  + LY +++   GGEL+  L+ +  
Sbjct: 33  ILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERC 92

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           F +   RFY A V  A  YLHS NIIYRDLKPEN+LL + G+V L DFG  K+ + P
Sbjct: 93  FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP 149

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  100 bits (250), Expect = 8e-24
 Identities = 48/117 (41%), Positives = 74/117 (63%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   ++E  Q  HI +E++I+ EA+  ++VK++ +F+DK+ LY++ME   GG++ T+L  
Sbjct: 35  RKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           K    +  T+FY A  V A D +H    I+RD+KP+NLLL   G+VKL DFG    L
Sbjct: 95  KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  100 bits (251), Expect = 9e-24
 Identities = 41/105 (39%), Positives = 69/105 (65%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           Q  H+ +E++++ E++  ++V LY +F+D +YLY++ME   GG+L T+L     F +  T
Sbjct: 44  QLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVT 103

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           RFY A  V A + +H    I+RD+KP+N+L+   G++KL DFG +
Sbjct: 104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 98.6 bits (245), Expect = 3e-23
 Identities = 48/117 (41%), Positives = 74/117 (63%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   ++E  Q  HI +E++I+ EA+  ++VK++ +F+DK  LY++ME   GG++ T+L  
Sbjct: 35  RKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           K    +  T+FY A  V A D +H    I+RD+KP+NLLL + G+VKL DFG    L
Sbjct: 95  KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score =   99 bits (249), Expect = 5e-23
 Identities = 39/104 (37%), Positives = 64/104 (61%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
             + +E++ +  +   FIV LY + +    +Y++ME  +GG++ ++L   G FD+     
Sbjct: 49  HQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVK 108

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           Y + V  A DYLH   II+RDLKP+N+L+S  G++KL DFG +K
Sbjct: 109 YISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 96.8 bits (241), Expect = 8e-23
 Identities = 42/106 (39%), Positives = 69/106 (65%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           Q Q +  E++I+  A   F+V ++ +F+ K++L M+ME   GG+  T+L++ G       
Sbjct: 44  QIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA 103

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           R Y A  V A +YLH+  I++RDLKP+NLL+++ G++KL DFG +K
Sbjct: 104 RMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSK 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 96.4 bits (240), Expect = 1e-22
 Identities = 41/114 (35%), Positives = 63/114 (55%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           I+   +  H ++E  ++      F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 33  IIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 92

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A  YLHS +++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 93  SEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 96.2 bits (239), Expect = 1e-22
 Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 3/150 (2%)

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM-GEANCDFIV 269
           VI + +F +++ +  +   K+      +++A  I++ ++++HIMSE+ ++       F+V
Sbjct: 2   VIGKGSFGKVLLARHKAEEKFYAVKVLQKKA--ILKKKEEKHIMSERNVLLKNVKHPFLV 59

Query: 270 KLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY 329
            L+ +F+    LY +++   GGEL+  L+ +  F +   RFY A +  A  YLHS NI+Y
Sbjct: 60  GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY 119

Query: 330 RDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           RDLKPEN+LL + G++ L DFG  K+ I  
Sbjct: 120 RDLKPENILLDSQGHIVLTDFGLCKENIEH 149

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 96.0 bits (239), Expect = 2e-22
 Identities = 47/113 (41%), Positives = 72/113 (63%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           ++ R +     E++I+ E N  FIVKL+  F+ +  LY++++   GG+L+T L  +  F 
Sbjct: 37  LKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT 96

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +   +FY A +  A D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I
Sbjct: 97  EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 96.0 bits (239), Expect = 2e-22
 Identities = 46/119 (38%), Positives = 68/119 (57%)

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           ++A  +   +   H  +E+ I+      FIV L   F+    LY+++E   GGEL+  L 
Sbjct: 33  KKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLE 92

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +G F + T  FY + +  A ++LH + IIYRDLKPEN+LL   G+VKL DFG  K+ I
Sbjct: 93  REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESI 151

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 95.2 bits (237), Expect = 3e-22
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 58/199 (29%)

Query: 157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQET 216
           LG G FG+V L ++ G  +  FA+K +KK  V+  DD             V C ++    
Sbjct: 3   LGKGSFGKVMLAELKGT-NEFFAIKALKKDVVLEDDD-------------VECTMV---- 44

Query: 217 FNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTF 275
                                                  E+ ++  A    F+  L+ TF
Sbjct: 45  ---------------------------------------ERRVLALAWEHPFLTHLFCTF 65

Query: 276 KDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
           + K++L+ +ME   GG+L   ++  G FD+A  RFY A ++    +LH + IIYRDLK +
Sbjct: 66  QTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLD 125

Query: 336 NLLLSTSGYVKLVDFGFAK 354
           N+LL   G++K+ DFG  K
Sbjct: 126 NVLLDKDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 95.5 bits (237), Expect = 3e-22
 Identities = 46/115 (40%), Positives = 74/115 (64%), Gaps = 1/115 (0%)

Query: 244 IVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++  ++Q+HIM+E+ ++       F+V L+ +F+  + LY +++   GGEL+  L+ + +
Sbjct: 33  VLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERS 92

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           F +   RFY A +  A  YLHS NI+YRDLKPEN+LL + G+V L DFG  K+ I
Sbjct: 93  FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGI 147

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 95.3 bits (237), Expect = 4e-22
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 62/210 (29%)

Query: 150 DLRVITTLGVGGFGRVELV--QIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           D  V + +G G FG V++V  +  GD    +A+K MKKS +                   
Sbjct: 2   DFDVKSLVGRGHFGEVQVVREKATGD---IYAMKVMKKSVL------------------- 39

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                           L +    + +E                     E++I+  +N  +
Sbjct: 40  ----------------LAQETVSFFEE---------------------ERDILSISNSPW 62

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I +L   F+DK  LY++ME   GG+L ++L R +  FD+   +FY A +V A   +H   
Sbjct: 63  IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG 122

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            ++RD+KPEN+L+  +G++KL DFG A +L
Sbjct: 123 YVHRDIKPENVLIDRTGHIKLADFGSAARL 152

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 91.4 bits (228), Expect = 3e-21
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 62/210 (29%)

Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
            +I  +G G FG+V LV+   D  + + LK++                            
Sbjct: 3   EIIKQIGKGSFGKVYLVRRKSD-GKLYVLKEID--------------------------- 34

Query: 212 IDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKL 271
                    +S++ E          ER  A            ++E +I+ + N   I+K 
Sbjct: 35  ---------LSNMSE---------KEREDA------------LNEVKILKKLNHPNIIKY 64

Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGN----FDDATTRFYTACVVEAFDYLHSRNI 327
           Y++F++K  L ++ME   GG+L   ++ +      F +     +   +  A  YLHSR I
Sbjct: 65  YESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI 124

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           ++RD+KP+N+ L+++G VKL DFG +K L 
Sbjct: 125 LHRDIKPQNIFLTSNGLVKLGDFGISKVLS 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 93.5 bits (232), Expect = 3e-21
 Identities = 40/113 (35%), Positives = 70/113 (61%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   ++   Q  H+ +E++I+ EA+ +++VKLY +F+DK  LY +M+   GG++ ++L  
Sbjct: 35  RKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
              F +   RFY A +  A + +H    I+RD+KP+N+L+   G++KL DFG 
Sbjct: 95  MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 91.9 bits (228), Expect = 5e-21
 Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 3/114 (2%)

Query: 244 IVETRQQQHIMSEKEIM---GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK 300
           IV  ++  H + E+ I+         FIV L  +F+    LY++ +   GGEL+  L+ +
Sbjct: 31  IVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKE 90

Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           G F +   +FY A +V A ++LH  +I+YRDLKPEN+LL  +G++ L DFG +K
Sbjct: 91  GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 91.6 bits (227), Expect = 1e-20
 Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 5/103 (4%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFYTA 313
           E++IM  AN  ++V+L+  F+D +YLYM+ME   GG+L  ++    N+D  +   RFYTA
Sbjct: 93  ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTA 149

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            VV A D +HS   I+RD+KP+N+LL  SG++KL DFG   K+
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 91.2 bits (226), Expect = 2e-20
 Identities = 40/113 (35%), Positives = 71/113 (62%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   ++   Q  H+ +E++I+ EA+ +++V+LY +F+DK  LY +M+   GG++ ++L  
Sbjct: 35  RKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
            G F +   RFY A +  A + +H    I+RD+KP+N+L+   G++KL DFG 
Sbjct: 95  MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 90.5 bits (224), Expect = 3e-20
 Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 5/103 (4%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFYTA 313
           E++IM  AN  ++V+L+  F+D KYLYM+ME   GG+L  ++    N+D  +   +FYTA
Sbjct: 93  ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTA 149

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            VV A D +HS  +I+RD+KP+N+LL   G++KL DFG   K+
Sbjct: 150 EVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|237999 cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor

 Score = 84.3 bits (209), Expect = 4e-20
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
            +  G+ IIRQG   D+ +I+  G V+V     +   E+ +  L  GD FGE AL G+  
Sbjct: 21  RFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDG-REQIVGFLGPGDLFGELALLGNGP 79

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
           R+A + A        LV+ +  F +L+    E+  + +
Sbjct: 80  RSATVRALTD--SELLVLPRSDFRRLLQEYPELARRLL 115

In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels. Length = 115

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 87.3 bits (217), Expect = 9e-20
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           E R+Q  ++ E + +      ++VK Y  F  +  + +++E   GG L  +L+  G   +
Sbjct: 41  EFRKQ--LLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPE 98

Query: 306 ATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +    +++  DYLH+ R+II+RD+KP NLL+++ G VK+ DFG +K L
Sbjct: 99  PVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVL 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 85.5 bits (212), Expect = 4e-19
 Identities = 38/104 (36%), Positives = 56/104 (53%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I  E +++       +VK Y     ++ +Y+ ME C GG L  +L      D+   R YT
Sbjct: 46  IADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYT 105

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++E   YLHS  I++RD+KP N+ L  +G +KL DFG A KL
Sbjct: 106 LQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 85.4 bits (212), Expect = 5e-19
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT 308
           Q+ I+ E +I+ + N  +IV  Y  F +   + + ME   GG L  IL++ +G   +   
Sbjct: 43  QKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERIL 102

Query: 309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                 V++   YLH    II+RD+KP N+L+++ G +KL DFG + +L+
Sbjct: 103 GKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 85.0 bits (211), Expect = 8e-19
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
            +  + ++ I++E  IM +     IV  Y ++     L+++ME   GG L  I+    NF
Sbjct: 53  RLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIIT--QNF 110

Query: 304 DDAT-TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                 +    C  V++  +YLHS+N+I+RD+K +N+LLS  G VKL DFGFA +L
Sbjct: 111 VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 85.5 bits (211), Expect = 9e-19
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)

Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
           ++ + TF ++I   ++   KY      ++    I+   +  H ++E  ++      F+  
Sbjct: 2   LLGKGTFGKVILVREKASGKYYAMKILKKEV--IIAKDEVAHTLTESRVLKNTRHPFLTS 59

Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           L  +F+ K  L  +ME   GGEL+  L  +  F +  TRFY A +V A DYLHS  I+YR
Sbjct: 60  LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYR 119

Query: 331 DLKPENLLLSTSGYVKLVDFGFAKKLI 357
           DLK ENL+L   G++K+ DFG  K+ I
Sbjct: 120 DLKLENLMLDKDGHIKITDFGLCKEGI 146

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 85.3 bits (211), Expect = 1e-18
 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 1/105 (0%)

Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M+EK I+  A N  F+ +LY  F+    L+ +ME   GG+L   ++    FD+A  RFY 
Sbjct: 43  MTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 102

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           A +  A  +LH + IIYRDLK +N+LL   G+ KL DFG  K+ I
Sbjct: 103 AEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 85.1 bits (210), Expect = 1e-18
 Identities = 42/118 (35%), Positives = 65/118 (55%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 29  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 88

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 89  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 84.2 bits (208), Expect = 3e-18
 Identities = 37/120 (30%), Positives = 73/120 (60%), Gaps = 1/120 (0%)

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           ++A  + + +  +H  +E+ ++       F+V L+  F+ +  L+++++   GGE++T L
Sbjct: 37  QKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHL 96

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             + NF +   RFY+  ++ A ++LH   I+YRD+K EN+LL + G+V L DFG +K+ +
Sbjct: 97  YQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 82.7 bits (205), Expect = 3e-18
 Identities = 35/108 (32%), Positives = 56/108 (51%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
             + IM E +++       IVK   + +    LY+++E    G L  I++  G F ++  
Sbjct: 42  ALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLV 101

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   V++   YLH + +I+RD+K  N+L +  G VKL DFG A KL
Sbjct: 102 AVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKL 149

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 83.2 bits (206), Expect = 3e-18
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTI---LRDKGNFD 304
           Q+ I+ E EI       +IVK Y  F D+    + + ME C GG L +I   ++ +G   
Sbjct: 43  QKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRI 102

Query: 305 DATTRFYTA-CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                   A  V++   YLHSR II+RD+KP N+LL+  G VKL DFG + +L+
Sbjct: 103 GEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 83.7 bits (207), Expect = 4e-18
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 254 MSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M+EK I+   A   F+  L+  F+ K  L+ +ME   GG+L   ++    FD+  +RFY 
Sbjct: 43  MTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYA 102

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           A V  A  +LH   +IYRDLK +N+LL   G+ KL DFG  K+ I  
Sbjct: 103 AEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN 149

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 82.5 bits (204), Expect = 5e-18
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFY 311
           ++EK+I+ + +  FIV L   F+ K  L ++M    GG+L   + + G   F +A   FY
Sbjct: 41  LNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFY 100

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            A ++   ++LH R I+YRDLKPEN+LL   G V++ D G A
Sbjct: 101 AAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 82.1 bits (203), Expect = 6e-18
 Identities = 35/89 (39%), Positives = 56/89 (62%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+   T +++  LY+ +E   GG L  +L+  G+F +   R YT  ++   +YLH RN 
Sbjct: 64  IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RD+K  N+L+ T+G VKL DFG AK++
Sbjct: 124 VHRDIKGANILVDTNGVVKLADFGMAKQV 152

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 83.1 bits (205), Expect = 6e-18
 Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 1/103 (0%)

Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++  A    F+  LY TF+ K++L+ +ME   GG+L   ++DKG FD     FY 
Sbjct: 43  MVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYA 102

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A +V    +LHS+ IIYRDLK +N++L   G++K+ DFG  K+
Sbjct: 103 AEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|215664 pfam00027, cNMP_binding, Cyclic nucleotide-binding domain

 Score = 77.0 bits (190), Expect = 9e-18
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +K+G+ I R+G   D+ +I+  GKVKV     +   E+ +  L  GDFFGE AL G + R
Sbjct: 4   FKKGEVIFREGDPADSLYIVLSGKVKVYKLDEDG-REQILAFLGPGDFFGELALLGGEPR 62

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISS 121
           +A +VA        LVI +E F +L+  
Sbjct: 63  SATVVALTD--SELLVIPREDFLELLEQ 88

Length = 91

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 82.0 bits (202), Expect = 2e-17
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 33  IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 92

Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 93  SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 6/132 (4%)

Query: 230 KYVDETSERRRAPQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           K   + +    A +I++   ++ +   M E +I+ E     IV LY+ +  +  L++L+E
Sbjct: 23  KAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82

Query: 287 SCLGGELWTILR--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
            C GG L +I+   ++G   +   R+    ++EA ++LHS  +I+RDLK  N+LL+  G 
Sbjct: 83  FCDGGALDSIMLELERG-LTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD 141

Query: 345 VKLVDFGFAKKL 356
           VKL DFG + K 
Sbjct: 142 VKLADFGVSAKN 153

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 82.1 bits (201), Expect = 3e-17
 Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 249 QQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR---DKGNFD 304
           + +  + E +I+   N    IVKLY  F+D+  LY++ME   GG L  +L+    KG   
Sbjct: 40  EVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLS 99

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAKKLIGPRYS 362
           ++   F  A ++ A +YLHS+ II+RD+KPEN+LL   G  VKL+DFG AK L  P  +
Sbjct: 100 ESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158

Length = 384

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 80.3 bits (198), Expect = 3e-17
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
           +  M EK I+ + +  FIV L   F+ K  L ++M    GG+L    + +  +   F + 
Sbjct: 38  EGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEP 97

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              FYTA ++   ++LH R IIYRDLKPEN+LL   G V++ D G A +L
Sbjct: 98  RACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVEL 147

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 79.3 bits (196), Expect = 8e-17
 Identities = 37/92 (40%), Positives = 51/92 (55%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L + F+ K  LY++ E      L  +    G       R Y   +++A  Y HS NI
Sbjct: 62  IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI 121

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           I+RD+KPEN+L+S SG +KL DFGFA+ L   
Sbjct: 122 IHRDIKPENILVSESGVLKLCDFGFARALRAR 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 79.0 bits (195), Expect = 9e-17
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 8/110 (7%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF----DDATTR 309
           M E  ++ +   + +V L + F+ KK LY++ E        T+L D   +    D++  R
Sbjct: 48  MREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDH----TVLDDLEKYPNGLDESRVR 103

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            Y   ++   ++ HS NII+RD+KPEN+L+S SG VKL DFGFA+ L  P
Sbjct: 104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 78.7 bits (195), Expect = 1e-16
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGE--LWTILRDK-GNFDDATTRFYTACV 315
           ++ E     IVKL      ++ LY++ E C   +  L   L  + G       +     +
Sbjct: 51  LLKELKHPNIVKLLDVIHTERKLYLVFEYC---DMDLKKYLDKRPGPLSPNLIKSIMYQL 107

Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +    Y HS  I++RDLKP+N+L++  G +KL DFG A+
Sbjct: 108 LRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 254 MSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++       F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY 
Sbjct: 48  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYA 107

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           A +     +LHS+ IIYRDLK +N++L   G++K+ DFG  K+ I  
Sbjct: 108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 79.3 bits (195), Expect = 1e-16
 Identities = 37/105 (35%), Positives = 65/105 (61%), Gaps = 7/105 (6%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA----TTRFY 311
           E+ ++   +C +I  L+  F+D+ YLY++M+  +GG+L T+L     F+D       RFY
Sbjct: 51  ERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFY 107

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            A +V A   +H  + ++RD+KP+N+LL  +G+++L DFG   K+
Sbjct: 108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKM 152

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 78.5 bits (193), Expect = 3e-16
 Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++  A    F+  LY TF+ K+ L+ +ME   GG+L   ++    FD     FY 
Sbjct: 43  MVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYA 102

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A ++    +LHS+ I+YRDLK +N+LL T G++K+ DFG  K+
Sbjct: 103 AEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKE 145

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 256 EKEI--MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYT 312
            KEI  + + +  +IVK Y ++     L+++ME C  G +  I++       +       
Sbjct: 46  IKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL 105

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
              ++  +YLHS   I+RD+K  N+LL+  G  KL DFG + +L  
Sbjct: 106 YQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 77.4 bits (190), Expect = 6e-16
 Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 253 IMSEKEIMGEANCD-FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A+ + F+V L+  F+    L++++E   GG+L   ++ +    +   RFY
Sbjct: 42  VQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFY 101

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            A +  A ++LH R IIYRDLK +N+LL   G++KL D+G  K+ +GP
Sbjct: 102 AAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP 149

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 77.0 bits (189), Expect = 8e-16
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 42  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 101

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 102 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 149

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 7/105 (6%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD----ATTRFY 311
           E++++   +  +I  L+  F+D+  LY++M+  +GG+L T+L     F+D       RFY
Sbjct: 51  ERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFY 107

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            A +V A D +H    ++RD+KP+N+LL  +G+++L DFG   +L
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRL 152

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTIL--RDKGNFDDATTRFYTACVVEAFDYLHSR 325
           IVKL + F++   LY + E  + G L+ ++  R    F ++  R     +++   ++H  
Sbjct: 60  IVKLKEVFRENDELYFVFE-YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH 118

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              +RDLKPENLL+S    VK+ DFG A+++
Sbjct: 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREI 149

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 76.2 bits (187), Expect = 1e-15
 Identities = 37/120 (30%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           ++A  + + +  +H  +E++++       F+V L+  F+    L+++++   GGEL+T L
Sbjct: 37  KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHL 96

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  F +   + Y+  +V A ++LH   IIYRD+K EN+LL ++G+V L DFG +K+  
Sbjct: 97  SQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I  E + + +    +I K Y +F     L+++ME C GG    +L+  G  D+    F  
Sbjct: 46  IQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK-PGKLDETYIAFIL 104

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V+   +YLH    I+RD+K  N+LLS  G VKL DFG + +L
Sbjct: 105 REVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQL 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 1/108 (0%)

Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +   A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 42  VQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFY 101

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A ++LH R IIYRDLK +N+LL   G++KL D+G  K+ I P
Sbjct: 102 SAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP 149

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYT 312
           + E + +      ++VKL   F       ++ME      L  +LRD+     +A  + Y 
Sbjct: 47  LREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYM 105

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +++   Y+H+  I++RDLKP NLL+S  G +K+ DFG A+
Sbjct: 106 RMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLAR 147

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|197516 smart00100, cNMP, Cyclic nucleotide-monophosphate binding domain

 Score = 71.3 bits (175), Expect = 3e-15
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y  G+ IIRQG  GD+F+II  G+V+V  K     EE+ + TL  GDFFGE AL  +  R
Sbjct: 22  YPAGEVIIRQGDVGDSFYIIVSGEVEVY-KVLEDGEEQIVGTLGPGDFFGELALLTNSRR 80

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
            A+  A   E  + L ID   F QL+  L ++
Sbjct: 81  AASAAAVALELATLLRIDFRDFLQLLPELPQL 112

Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases. Length = 120

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 7e-15
 Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTAC 314
           E +++ E N   I+KL   F+ K  LY++ E     +L+ +++D+     ++  + Y   
Sbjct: 48  EIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQ 106

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +++   + HS  I++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 107 LLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 73.5 bits (180), Expect = 1e-14
 Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 6/120 (5%)

Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A +++ET+ ++ +   M E EI+   N  +IVKL   F     L++++E C GG +  I+
Sbjct: 41  AAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIM 100

Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
              D+G   +   +     ++EA  YLHS  II+RDLK  N+LL+  G +KL DFG + K
Sbjct: 101 LELDRG-LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 35/89 (39%), Positives = 53/89 (59%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+ Y   +D + L + ME   GG +   L+  G   +  TR YT  ++E  +YLHS  I
Sbjct: 66  IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI 125

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RD+K  N+L  ++G VKL DFG +K+L
Sbjct: 126 VHRDIKGANILRDSAGNVKLGDFGASKRL 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFY 311
           ++EK+I+ + N  F+V L   ++ K  L +++    GG+L   + + GN  FD+    FY
Sbjct: 48  LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFY 107

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            A +    + LH   I+YRDLKPEN+LL   G++++ D G A ++
Sbjct: 108 AAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 72.5 bits (178), Expect = 1e-14
 Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGN-FDD 305
           ++++  ++E  I+       I+  Y  F D   L + ME   GG L+  I+R KG  F++
Sbjct: 41  KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEE 100

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +Y   +V A  Y+H   I++RD+K  N+ L+ +G +KL DFG +K L
Sbjct: 101 EMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKIL 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 5/128 (3%)

Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           Y  +  E++R   I + + +   ++EK+I+ + N  F+V L   ++ K  L +++    G
Sbjct: 28  YACKRLEKKR---IKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84

Query: 291 GELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           G+L   + + GN  F++    FY A ++   + LH  N +YRDLKPEN+LL   G++++ 
Sbjct: 85  GDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRIS 144

Query: 349 DFGFAKKL 356
           D G A K+
Sbjct: 145 DLGLAVKI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 72.4 bits (177), Expect = 4e-14
 Identities = 34/103 (33%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
           E++++   +  +I  L+  F+D+  LY++M+  +GG+L T+L + +    +   RFY A 
Sbjct: 51  ERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAE 110

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +V A D +H  + ++RD+KP+N+L+  +G+++L DFG   KL+
Sbjct: 111 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 70.6 bits (174), Expect = 6e-14
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDA 306
            +++  + E  IM + +   IV+L       + LY++ E   GG+L   LR  G      
Sbjct: 43  EEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLK 102

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   + +  +YL S+N ++RDL   N L++ +  VK+ DFG ++ +
Sbjct: 103 DLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDI 152

Length = 258

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 71.2 bits (174), Expect = 8e-14
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)

Query: 254 MSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++       F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY 
Sbjct: 48  MVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYA 107

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A +     +LHS+ IIYRDLK +N++L + G++K+ DFG  K+
Sbjct: 108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 70.3 bits (172), Expect = 9e-14
 Identities = 33/90 (36%), Positives = 52/90 (57%)

Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
           +C FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++   +++H
Sbjct: 55  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMH 114

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           +R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 115 NRFVVYRDLKPANILLDEHGHVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 33/76 (43%), Positives = 48/76 (63%)

Query: 280 YLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL 339
           YL + +E   GG + + LR  G F++   RF+T  V+E   YLHS+ I++RDLK +NLL+
Sbjct: 82  YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV 141

Query: 340 STSGYVKLVDFGFAKK 355
              G  K+ DFG +KK
Sbjct: 142 DADGICKISDFGISKK 157

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 70.4 bits (172), Expect = 1e-13
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)

Query: 254 MSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++  +    F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY 
Sbjct: 48  MVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 107

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A +     +LH R IIYRDLK +N++L + G++K+ DFG  K+
Sbjct: 108 AEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---GNFDDATT 308
            +  E + M + N   +VK Y +F     L+++M    GG L  I++     G  D+A  
Sbjct: 45  ELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAII 104

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
                 V++  +YLHS   I+RD+K  N+LL   G VK+ DFG
Sbjct: 105 ATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFG 147

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 30/92 (32%), Positives = 53/92 (57%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +V L + F+ K+ L+++ E C    L  + ++     +   +      ++A ++ H  N 
Sbjct: 62  LVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           I+RD+KPEN+L++  G +KL DFGFA+ L GP
Sbjct: 122 IHRDVKPENILITKQGQIKLCDFGFARILTGP 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 68.1 bits (166), Expect = 6e-13
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 245 VETRQQQHIMSEKEIM----GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK 300
           ++ +Q + +   + IM       +C FIV +   F     L  +++   GG+L   L   
Sbjct: 32  IKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQH 91

Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           G F +   RFY   ++   +++H+R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 92  GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 67.9 bits (166), Expect = 6e-13
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I+ E +IM E    +IV  Y  F ++  + M ME    G L  I +  G        
Sbjct: 47  RKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILG 106

Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                VVE   YL++ + I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 67.7 bits (166), Expect = 6e-13
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 13/122 (10%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTIL----RDK 300
            +++Q ++SE  I+ E     IV+ Y    D+  + LY++ME C GG+L  ++    +++
Sbjct: 40  EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKER 99

Query: 301 GNFD-DATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              + +   R  T  ++ A    H+R+     +++RDLKP N+ L  +  VKL DFG AK
Sbjct: 100 KYIEEEFIWRILTQ-LLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158

Query: 355 KL 356
            L
Sbjct: 159 IL 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 68.1 bits (166), Expect = 7e-13
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 5/128 (3%)

Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           Y  +  E++R   I + + +   ++EK I+ + N  F+V L   ++ K  L +++    G
Sbjct: 28  YACKKLEKKR---IKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84

Query: 291 GELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           G+L   + + GN  FD+    FY A +    + L    I+YRDLKPEN+LL   G++++ 
Sbjct: 85  GDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRIS 144

Query: 349 DFGFAKKL 356
           D G A ++
Sbjct: 145 DLGLAVQI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 67.5 bits (165), Expect = 7e-13
 Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 4/113 (3%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RDKGNF 303
            R+++  + E  ++ + +  +I++ Y++F DK  L ++ME    G+L  +L   R +   
Sbjct: 40  RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLP 99

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +D   RF+   ++    +LHS+ I++RD+K  NL L     VK+ D G AK L
Sbjct: 100 EDQVWRFFIQILL-GLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL 151

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 67.7 bits (165), Expect = 7e-13
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 5/125 (4%)

Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           Y  +  E++R   I + + +   ++EK+I+ + N  F+V L   ++ K  L +++    G
Sbjct: 28  YACKKLEKKR---IKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84

Query: 291 GELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           G+L   +   G   F++    FY A +    + LH   I+YRDLKPEN+LL   G++++ 
Sbjct: 85  GDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS 144

Query: 349 DFGFA 353
           D G A
Sbjct: 145 DLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 67.5 bits (165), Expect = 8e-13
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD--ATTRFYTACVVEAFDYLHS 324
           IV+   +  +  +  + ME   GG L  +LR K G   D   T  FYT  ++E   YLH 
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Query: 325 RNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
             I++RD+K +N+L++T SG VK+ DFG +K+L G
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 67.2 bits (165), Expect = 8e-13
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
             +Q +  + E  IM + +   IVKL     +++ L ++ME   GG+L   LR     + 
Sbjct: 41  SEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKEL 100

Query: 306 ATTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           + +   +    +    +YL S+N I+RDL   N L+  +  VK+ DFG ++ L
Sbjct: 101 SLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDL 153

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 66.8 bits (163), Expect = 1e-12
 Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           + +  E  +M   N   I+++     +  +  + +E   GG +  +L   G F +A    
Sbjct: 48  EALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIIN 107

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAKKL 356
           YT  ++    YLH   II+RD+K  NLL+ ++G  +++ DFG A +L
Sbjct: 108 YTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTAC 314
           E +++ E     I+ L   F  K  + ++ E  +  +L  +++DK      A  + Y   
Sbjct: 52  EIKLLQELKHPNIIGLLDVFGHKSNINLVFE-FMETDLEKVIKDKSIVLTPADIKSYMLM 110

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
            +   +YLHS  I++RDLKP NLL+++ G +KL DFG A+ 
Sbjct: 111 TLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARS 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 66.9 bits (163), Expect = 2e-12
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 2/103 (1%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR--FYTA 313
           EKEI+ + N  FIV L   F+ K +L ++M    GG+L   + + G       R   Y+A
Sbjct: 43  EKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSA 102

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +     +LHS +I+YRD+KPEN+LL   G  +L D G A +L
Sbjct: 103 QITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVEL 145

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           ++    V  +S+ R+   +        +  E  ++ E   + IV+   +  D  +L + +
Sbjct: 32  QVELPSVSASSKDRKRSML------DALAREIALLKELQHENIVQYLGSSLDADHLNIFL 85

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GG +  +L + G F++   R +   +++  +YLH+R II+RD+K  N+L+   G +
Sbjct: 86  EYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGI 145

Query: 346 KLVDFGFAKKL 356
           K+ DFG +KKL
Sbjct: 146 KISDFGISKKL 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 66.1 bits (161), Expect = 2e-12
 Identities = 30/114 (26%), Positives = 59/114 (51%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            +   ++ + +  E +++       IV+   T  D   + + ME   GG + +IL   G 
Sbjct: 39  VLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGP 98

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +     YT  +++   YLH+  +++RD+K  N++L  +G +KL+DFG A++L
Sbjct: 99  LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 66.2 bits (161), Expect = 2e-12
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 5/131 (3%)

Query: 230 KYVDETSERRRAPQIVETRQQQH----IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           K +D  +++  A +I++  + +     I  E  ++ + +  ++ K Y ++     L+++M
Sbjct: 22  KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GG    +LR  G FD+         +++  DYLHS   I+RD+K  N+LLS  G V
Sbjct: 82  EYLGGGSALDLLR-AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDV 140

Query: 346 KLVDFGFAKKL 356
           KL DFG A +L
Sbjct: 141 KLADFGVAGQL 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|223736 COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
             +G+ +  +G   D+ +II  G VK+     +   E  +  L  GDFFGE AL G D R
Sbjct: 28  LPKGEVLFTEGEEADSLYIILSGIVKLYANTEDG-REIILGFLGPGDFFGELALLGGDPR 86

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
           +A+ VA     V  L I ++ F +L++   ++    +   + R R+  E    L   D+ 
Sbjct: 87  SASAVALTD--VEVLEIPRKDFLELLAESPKLALALLRLLARRLRQALERLSLLARKDVE 144

Query: 152 -RVITTL 157
            R+   L
Sbjct: 145 ERLARFL 151

Length = 214

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 65.6 bits (161), Expect = 3e-12
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT 307
           Q +  + E  IM + +   +VKL     +++ LY++ME   GG+L + LR  +     + 
Sbjct: 44  QIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSD 103

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              +   +    +YL S+N I+RDL   N L+  +  VK+ DFG ++ L
Sbjct: 104 LLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDL 152

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 65.5 bits (159), Expect = 3e-12
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)

Query: 242 PQIVETRQQQHIMS-EKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILR 298
           P+  ET ++   +  E +++     + IV+ Y   +D+  K L + ME   GG +   L+
Sbjct: 39  PESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLK 98

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             G   ++ TR YT  ++E   YLHS  I++RD+K  N+L  ++G VKL DFG +K+L
Sbjct: 99  AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 65.6 bits (160), Expect = 4e-12
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RDKGNFDDATTR 309
           I+ E +I+ +A   +IV  Y  F  +  +YM ME    G L  +           +   R
Sbjct: 46  IIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLR 105

Query: 310 FYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             T  VV+   +L    NII+RD+KP N+L++ +G VKL DFG +  L+
Sbjct: 106 RITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 65.4 bits (159), Expect = 4e-12
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 8/121 (6%)

Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWT 295
           A ++++T+ ++ +   M E +I+  A+CD   IVKL   F  +  L++L+E C GG +  
Sbjct: 34  AAKVIDTKSEEELEDYMVEIDIL--ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 91

Query: 296 ILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++ + +    +   R      +EA +YLH   II+RDLK  N+L +  G +KL DFG + 
Sbjct: 92  VMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSA 151

Query: 355 K 355
           K
Sbjct: 152 K 152

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 65.8 bits (160), Expect = 4e-12
 Identities = 42/129 (32%), Positives = 77/129 (59%), Gaps = 8/129 (6%)

Query: 233 DETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           ++ S R+ A ++++ R+QQ    + +E  IM +     +V++YK++   + L++LME   
Sbjct: 42  EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101

Query: 290 GGELWTILRDKGNFDDATTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKL 347
           GG L  I+      ++   +  T C  V++A  YLHS+ +I+RD+K +++LL+  G VKL
Sbjct: 102 GGALTDIVSQTRLNEE---QIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKL 158

Query: 348 VDFGFAKKL 356
            DFGF  ++
Sbjct: 159 SDFGFCAQI 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 37/127 (29%), Positives = 73/127 (57%), Gaps = 4/127 (3%)

Query: 233 DETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           D+++ R+ A + ++ R+QQ    + +E  IM +     IV++Y ++     L+++ME   
Sbjct: 40  DKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99

Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
           GG L  I+      ++         V++A  +LH++ +I+RD+K +++LL++ G VKL D
Sbjct: 100 GGALTDIV-THTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSD 158

Query: 350 FGFAKKL 356
           FGF  ++
Sbjct: 159 FGFCAQV 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 65.1 bits (159), Expect = 7e-12
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 7/120 (5%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLY-KTFKDKK-YLYM-LMESCLGGELWTILRD- 299
           + E  Q++ +M    +M  ++C +IVK Y   F++   ++ M LM+  L  + +  + + 
Sbjct: 41  VDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLD-KFYKYVYEV 99

Query: 300 -KGNFDDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            K    +          V+A +YL     II+RD+KP N+LL  +G +KL DFG + +L+
Sbjct: 100 LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 65.1 bits (159), Expect = 7e-12
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
             R Q  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +
Sbjct: 41  AIRNQ--IIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 98

Query: 306 ATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                 +  V+    YL     I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 99  NILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I K Y ++     L+++ME   GG + T+++  G   +         V+ A  Y+H   +
Sbjct: 64  ITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK-AGPIAEKYISVIIREVLVALKYIHKVGV 122

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           I+RD+K  N+L++ +G VKL DFG A  L
Sbjct: 123 IHRDIKAANILVTNTGNVKLCDFGVAALL 151

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 63.9 bits (155), Expect = 1e-11
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 230 KYVDETSERRRAPQIVETRQQQH----IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           K +D  +++  A +I++  + +     I  E  ++ + +  ++ K Y ++     L+++M
Sbjct: 22  KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GG    +L + G  D+         +++  DYLHS   I+RD+K  N+LLS  G V
Sbjct: 82  EYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 140

Query: 346 KLVDFGFAKKL 356
           KL DFG A +L
Sbjct: 141 KLADFGVAGQL 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFY 311
           I  E  ++ E     IV  + ++  +  L+++ME C GG L  I    +G   +    + 
Sbjct: 47  IQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYV 106

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               ++   YLH    I+RD+K  N+LL+  G VKL DFG + +L
Sbjct: 107 CRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQL 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 47  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 106

Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 63.5 bits (154), Expect = 2e-11
 Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 268 IVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
           IV+ Y   +D  ++ L + ME   GG +   L+  G   +  TR YT  ++E   YLHS 
Sbjct: 66  IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN 125

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            I++RD+K  N+L  + G VKL DFG +K+L
Sbjct: 126 MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 2e-11
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 10/95 (10%)

Query: 268 IVKLYK--TFKDKKYLYMLMESC---LGGELWTILRDKGN-FDDATTRFYTACVVEAFDY 321
           IV+L +  T K K  +YM+ E     L G    +L      F ++  + Y   ++E   Y
Sbjct: 60  IVRLKEIVTSKGKGSIYMVFEYMDHDLTG----LLDSPEVKFTESQIKCYMKQLLEGLQY 115

Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           LHS  I++RD+K  N+L++  G +KL DFG A+  
Sbjct: 116 LHSNGILHRDIKGSNILINNDGVLKLADFGLARPY 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 63.0 bits (153), Expect = 3e-11
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 10/111 (9%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL---WTILRDKGNFDDA 306
           Q+ IMSE EI+ + +  +I+  Y  F  +  + +  E   GG L     I       +  
Sbjct: 43  QKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIP------EHV 96

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             R   A VV+   YL S  I++RD+KP N+L++T G VKL DFG + +L+
Sbjct: 97  LGRIAVA-VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV 146

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 19/36 (52%), Positives = 29/36 (80%)

Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           D+LHS  I++RDLKP+N+L+++ G VK+ DFG A+ 
Sbjct: 121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 62.6 bits (153), Expect = 6e-11
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 10/98 (10%)

Query: 264 NCDFIVKLYKTFK--DKKYLYM---LMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           +   IVKL    K  + K +Y+    ME+    +L  ++R     +D   R+    +++A
Sbjct: 65  DHPNIVKLLNVIKAENDKDIYLVFEYMET----DLHAVIR-ANILEDVHKRYIMYQLLKA 119

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y+HS N+I+RDLKP N+LL++   VKL DFG A+ L
Sbjct: 120 LKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDA 306
           ++    +E +++   +   I++ Y+ F + K L ++ME   GG L   ++ + N   D+ 
Sbjct: 42  ERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDED 101

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           T   +   ++ A  ++H++ I++RDLK +N+LL      VK+ DFG +K L
Sbjct: 102 TILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 61.6 bits (149), Expect = 8e-11
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 3/118 (2%)

Query: 242 PQIVETRQQQHIMS-EKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILR 298
           P   ET ++ + +  E +++     D IV+ Y   +D  +K L + +E   GG +   L+
Sbjct: 39  PDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK 98

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             G   +  TR YT  +++   YLHS  I++RD+K  N+L  ++G VKL DFG +K++
Sbjct: 99  AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.0 bits (149), Expect = 1e-10
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++  + E  +M +     +V+L     +++ LY+++E   GG+L   LR       +  
Sbjct: 39  ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPE 98

Query: 309 R---------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +          +   + +  +YL S+  ++RDL   N L+     VK+ DFG ++ +
Sbjct: 99  KSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 256 EKEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI+   +C    IV  + ++  +  L++ ME C GG L  I    G   ++   + + 
Sbjct: 54  QQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSR 113

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++   YLHS+  ++RD+K  N+LL+ +G+VKL DFG + ++
Sbjct: 114 ETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           QQ I   KE     +C+ IV  + ++  ++ L++ ME C GG L  I    G   +    
Sbjct: 54  QQEIFMVKEC---KHCN-IVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIA 109

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +     ++   YLHS+  ++RD+K  N+LL+ +G VKL DFG A K+
Sbjct: 110 YVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 10/151 (6%)

Query: 211 VIDQETFNQLISSLDEIRTKY--VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
            I + +F ++  +  +  +++  + E    +   +  E  +++ I+  K  M   N   I
Sbjct: 7   KIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK--MKHPN---I 61

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWT-ILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           V  + +F++   L+++ME C GG+L   I R +G  F +     +   +     ++H R 
Sbjct: 62  VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121

Query: 327 IIYRDLKPENLLLSTSGYV-KLVDFGFAKKL 356
           I++RD+K +N+ LS +G V KL DFG A++L
Sbjct: 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 5/117 (4%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
            ++  + E EI+ + +   IVKL      K+ +Y++ME   GG L T LR K N    T 
Sbjct: 35  LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN--RLTV 92

Query: 309 RFYTACVVEA---FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +      ++A    +YL S+N I+RDL   N L+  +  +K+ DFG +++  G  Y+
Sbjct: 93  KKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT 149

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 60.1 bits (145), Expect = 3e-10
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 230 KYVDETSERRRAPQIVETRQQQH----IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           K +D  ++   A +I++  + +     I  E  ++ + +  +I + Y ++     L+++M
Sbjct: 22  KGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GG    +L+  G  ++         +++  DYLHS   I+RD+K  N+LLS  G V
Sbjct: 82  EYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDV 140

Query: 346 KLVDFGFAKKL 356
           KL DFG A +L
Sbjct: 141 KLADFGVAGQL 151

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 60.4 bits (146), Expect = 3e-10
 Identities = 36/129 (27%), Positives = 75/129 (58%), Gaps = 8/129 (6%)

Query: 233 DETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           ++ + ++ A + ++ R+QQ    + +E  IM + + + +V +Y ++     L+++ME   
Sbjct: 43  EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102

Query: 290 GGELWTILRDKGNFDDATTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKL 347
           GG L  I+      ++   +  T C  V+ A  YLH++ +I+RD+K +++LL++ G +KL
Sbjct: 103 GGALTDIVTHTRMNEE---QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKL 159

Query: 348 VDFGFAKKL 356
            DFGF  ++
Sbjct: 160 SDFGFCAQV 168

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 268 IVKLYKTFKDKKYLYMLM---ESCLGGELWTILRDKG-NFDDATTRFYTACVVEAFDYLH 323
           IV+ YKTF +   LY++M   E    GE +  L++K   F +         +V A  YLH
Sbjct: 71  IVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH 130

Query: 324 -SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             + I++RDL P N++L     V + DFG AK+
Sbjct: 131 KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 60.4 bits (146), Expect = 3e-10
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L++     +    
Sbjct: 47  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 106

Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V+    YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 58.8 bits (142), Expect = 7e-10
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGN- 302
           VE  +++ ++  K  M   N   IV   ++F+   +LY++ME C GG+L   ++  +G  
Sbjct: 42  VEDSRKEAVLLAK--MKHPN---IVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKL 96

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           F + T   +   +     ++H + +++RD+K +N+ L+ +G VKL DFG A+ L  P
Sbjct: 97  FPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 58.9 bits (143), Expect = 7e-10
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLME---SCLGGELWTILRDKGNFDDATTRFYT 312
           E  ++ E N   IV+L      +  LY++ E     L   + +        D    + Y 
Sbjct: 48  EISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTG--LDPPLIKSYL 105

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +++   Y HS  +++RDLKP+NLL+   G +KL DFG A+
Sbjct: 106 YQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 58.9 bits (143), Expect = 8e-10
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 264 NCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFD 320
           +C +IVK Y  F    D      LM +CL   L    R +G   +      T  +V+A  
Sbjct: 72  DCPYIVKCYGYFITDSDVFICMELMSTCLDKLL---KRIQGPIPEDILGKMTVAIVKALH 128

Query: 321 YLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           YL  +  +I+RD+KP N+LL  SG VKL DFG + +L+
Sbjct: 129 YLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 59.6 bits (144), Expect = 8e-10
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGEL 293
            E+  A  ++   ++Q   +  E+   A CD   IVK +  FK    L ++ME   GG+L
Sbjct: 93  KEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDL 152

Query: 294 ----WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
                  L++   F +         +V A D +HSR +++RDLK  N+ L  +G +KL D
Sbjct: 153 NKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGD 212

Query: 350 FGFAKK 355
           FGF+K+
Sbjct: 213 FGFSKQ 218

Length = 478

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT 307
           Q  +I++ KE++  +N D I             YM+ME  +  +L +++   K  F  + 
Sbjct: 62  QHPNIVTVKEVVVGSNLDKI-------------YMVME-YVEHDLKSLMETMKQPFLQSE 107

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            +     ++    +LH   I++RDLK  NLLL+  G +K+ DFG A++   P
Sbjct: 108 VKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 58.7 bits (143), Expect = 1e-09
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)

Query: 251 QHIMSEKEIMGEANCDFIVKL--------YKTFKDKKYLYM-LMESCLGGELWTILRDKG 301
           + I+ E +++     + I+ L         + F D  Y+   LME+    +L  +++   
Sbjct: 44  KRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV-YIVTELMET----DLHKVIKSPQ 98

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              D   +++   ++    YLHS N+I+RDLKP N+L++++  +K+ DFG A+ +
Sbjct: 99  PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 12/115 (10%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWT-ILRDKGNF- 303
           E+R++  ++S    M   N   IV+  ++F++   LY++M+ C GG+L+  I   +G   
Sbjct: 45  ESRKEVAVLSN---MKHPN---IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLF 98

Query: 304 --DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             D     F   C+  A  ++H R I++RD+K +N+ L+  G +KL DFG A+ L
Sbjct: 99  PEDQILDWFVQICL--ALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 20/97 (20%)

Query: 268 IVKLYKTFKDKKYLYMLMESC----------LGGELWTILRDKGNFDDATTRFYTACVVE 317
           IV+LY      K L ++ E C            G++          D    + +   +++
Sbjct: 61  IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDI----------DPEIVKSFMFQLLK 110

Query: 318 AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              + HS N+++RDLKP+NLL++ +G +KL DFG A+
Sbjct: 111 GLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    D+   
Sbjct: 59  KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQI 117

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                  ++A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 118 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 30/91 (32%), Positives = 50/91 (54%)

Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
           + IV+L + F+ +  LY++ E      L  +            R Y   +++A  + H  
Sbjct: 60  ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN 119

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +I++RD+KPENLL+S +  +KL DFGFA+ L
Sbjct: 120 DIVHRDIKPENLLISHNDVLKLCDFGFARNL 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 268 IVKLYKTF-KDKKY----LYMLMESCLGGELWTI----LRDKGNFDDATTRFYTACVVEA 318
           +VK Y  F K  K     L++++E C GG +  +    L      D+A   +     +  
Sbjct: 81  VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG 140

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
             +LH+  II+RD+K  N+LL+T G VKLVDFG + +L   R
Sbjct: 141 LQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 182

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 56.8 bits (137), Expect = 3e-09
 Identities = 25/85 (29%), Positives = 46/85 (54%)

Query: 267 FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
            +V L+K    +  ++++++   GG+LW+ +    N  +   + + A +V A D LH   
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG 105

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFG 351
           I+ RDL P N+LL   G+++L  F 
Sbjct: 106 IVCRDLNPNNILLDDRGHIQLTYFS 130

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 57.0 bits (137), Expect = 3e-09
 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 59  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 118

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A D+LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 119 AVCRECL-QALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
            ++  + E  +M + +   IV+L    K +  + ++ME    G L   L+ +     +  
Sbjct: 39  GKKEFLREASVMAQLDHPCIVRLIGVCKGEPLM-LVMELAPLGPLLKYLKKRREIPVSDL 97

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +     V     YL S++ ++RDL   N+LL      K+ DFG ++ L
Sbjct: 98  KELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 56.6 bits (136), Expect = 4e-09
 Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 8/128 (6%)

Query: 234 ETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++S +  A + ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   G
Sbjct: 42  KSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101

Query: 291 GELWTILRDKGNFDDATTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           G L  I+      ++   +    C  V++A   LH++ +I+RD+K +++LL+  G VKL 
Sbjct: 102 GALTDIVTHTRMNEE---QIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 158

Query: 349 DFGFAKKL 356
           DFGF  ++
Sbjct: 159 DFGFCAQV 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)

Query: 255 SEKEIMGEANC--DF-----IVKLYKTFKDKKY------LYMLMESCLGG---ELWTILR 298
            E+EI  E N    +     I   Y  F  K        L+++ME C GG   +L   LR
Sbjct: 45  EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLR 104

Query: 299 DKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            KG    +    +     +    YLH   +I+RD+K +N+LL+ +  VKLVDFG + +L
Sbjct: 105 KKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 15/136 (11%)

Query: 221 ISSLDEIRTKYVDE--TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK 278
           I ++ +IR +  +E   S   R   +++  Q  +I+  ++++ + +  +++  + +   K
Sbjct: 27  IVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLK 86

Query: 279 KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           KY    ++S         L      D    + Y   +++   + HSR +++RDLKP+NLL
Sbjct: 87  KY----LDS---------LPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLL 133

Query: 339 LSTSGYVKLVDFGFAK 354
           +   G +KL DFG A+
Sbjct: 134 IDNKGVIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 56.7 bits (136), Expect = 5e-09
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    +F     L+++ME   GG L  ++ +    D+A  
Sbjct: 59  KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC-MDEAQI 117

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                  ++A ++LH+  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 118 AAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 57.0 bits (138), Expect = 5e-09
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 275 FKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLK 333
           FKD  Y+ M LMES    +L  I+       +   R++   ++    Y+HS N+I+RDLK
Sbjct: 80  FKDV-YVVMDLMES----DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLK 134

Query: 334 PENLLLSTSGYVKLVDFGFAKKL 356
           P NLL++    +++ DFG A+ L
Sbjct: 135 PSNLLVNEDCELRIGDFGMARGL 157

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 55.4 bits (133), Expect = 8e-09
 Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR----D 299
           +++ + +   + E +++ + N   ++K Y +F +   L +++E    G+L  +++     
Sbjct: 40  LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 99

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           K    + T   Y   +  A +++HSR +++RD+KP N+ ++ +G VKL D G  +
Sbjct: 100 KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 15/151 (9%)

Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQH--IMSEKEIMGEA 263
           G+ C   + ET N+ ++ + +I   + +    +R   +I   R   H  +++ K+IM   
Sbjct: 19  GIVCSAKNSET-NEKVA-IKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPP 76

Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
           + +        F D   +Y LM++    +L  I+R      D   +++   ++    Y+H
Sbjct: 77  HRE-------AFNDVYIVYELMDT----DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH 125

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           S N+++RDLKP NLLL+ +  +K+ DFG A+
Sbjct: 126 SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 55.5 bits (133), Expect = 1e-08
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   + +  +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +
Sbjct: 51  RQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +         C+ +A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 111 TCMDEGQIAAVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)

Query: 280 YLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           YLY  LME+    +L  I+R      DA  + +   ++    Y+HS N+++RDLKP NLL
Sbjct: 82  YLYEELMEA----DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLL 137

Query: 339 LSTSGYVKLVDFGFAK 354
           ++    +K+ DFG A+
Sbjct: 138 VNADCELKICDFGLAR 153

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF----- 303
           +++  ++E  I+   N   I+   + F D   L ++ME    G+L   +  +        
Sbjct: 42  EREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIP 101

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +    R +   ++     LH + I++RDLK  N+LL  +  VK+ D G +K L
Sbjct: 102 EQEIWRIFIQ-LLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVL 153

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 37/126 (29%), Positives = 74/126 (58%), Gaps = 9/126 (7%)

Query: 239 RRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKT-FKDKK-YLYM-LMESCLGGELW 294
           +R    V +++Q+ ++ + +I M   +C + V  Y   F++   ++ M +M++ L  + +
Sbjct: 32  KRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLD-KFY 90

Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
             + DKG    +D   +     +V+A +YLHS+ ++I+RD+KP N+L++ +G VKL DFG
Sbjct: 91  KKVYDKGLTIPEDILGKI-AVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFG 149

Query: 352 FAKKLI 357
            +  L+
Sbjct: 150 ISGYLV 155

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 21/149 (14%)

Query: 232 VDETSERRRAPQIVETRQQQ---HIMSEKEIMGEANCDFIVKLYKTFKDK---------- 278
           VD   ++R A + +     Q   H + E +I+   + D IVK+Y+               
Sbjct: 25  VDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84

Query: 279 ----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
                 +Y++ E  +  +L  +L ++G   +   R +   ++    Y+HS N+++RDLKP
Sbjct: 85  LTELNSVYIVQE-YMETDLANVL-EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKP 142

Query: 335 ENLLLSTSGYV-KLVDFGFAKKLIGPRYS 362
            N+ ++T   V K+ DFG A +++ P YS
Sbjct: 143 ANVFINTEDLVLKIGDFGLA-RIVDPHYS 170

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDAT 307
               + E  IM   + + +++LY        L M+ E    G L   LR    G+F  +T
Sbjct: 40  MDDFLKEAAIMHSLDHENLIRLYGVVLTHP-LMMVTELAPLGSLLDRLRKDALGHFLIST 98

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              Y   +     YL S+  I+RDL   N+LL++   VK+ DFG  + L
Sbjct: 99  LCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRAL 147

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-------DK 300
           R++   ++E  +M E NC  +V+L       +   ++ME    G+L + LR       + 
Sbjct: 51  RERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENN 110

Query: 301 GNFDDATT-RFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
                 T  +F      + +   YL ++  ++RDL   N +++    VK+ DFG  +
Sbjct: 111 PGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATT 308
           Q  ++E  +M       +V+L         LY++ E    G L   LR +G      A  
Sbjct: 45  QAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQ 104

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +   V E  +YL  +N ++RDL   N+L+S     K+ DFG AK+
Sbjct: 105 LGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 35/161 (21%)

Query: 206 GVSCLVIDQETFNQL-ISSLDEIRTKYVDETSERR--------RAPQIVETRQQQHIM-- 254
           GV C  ID  T  ++ I  ++++     D T   R        R P IVE +   HIM  
Sbjct: 14  GVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIK---HIMLP 70

Query: 255 -SEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
            S +E                FKD   ++ LMES    +L  +++   +      +F+  
Sbjct: 71  PSRRE----------------FKDIYVVFELMES----DLHQVIKANDDLTPEHHQFFLY 110

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            ++ A  Y+H+ N+ +RDLKP+N+L +    +K+ DFG A+
Sbjct: 111 QLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 151

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            Y H R +++RDLKP+NLL+S  G +KL DFG A+
Sbjct: 117 AYCHQRRVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|178459 PLN02868, PLN02868, acyl-CoA thioesterase family protein

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
            Y +G+Y++R+G  GD  + I KG+ +V+      +  +++  L + D+FG        +
Sbjct: 35  RYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFL--LKRYDYFGYGLSG--SV 90

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNE---EFRSLRLS 149
            +A++VA     ++CLV+  E    L+S      +   D+T +   L E       L + 
Sbjct: 91  HSADVVAVSE--LTCLVLPHE-HCHLLSPKSIWDS---DKTPKDCSLVERILHLEPLEVD 144

Query: 150 DLRVITTLGVGGFGRV 165
             R IT      FG+V
Sbjct: 145 IFRGITLPDAPTFGKV 160

Length = 413

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 21/110 (19%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYML-----------MESCLGGELWTILRDKGNFD 304
           E  ++ E N   IVKL      +  LY++           M++     +   L       
Sbjct: 49  EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPL------- 101

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+
Sbjct: 102 ---IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 238 RRRAPQIVETRQQQ-------HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           + + P  V+T ++          +SE  I+ + +   IVKL      ++ +Y++ME   G
Sbjct: 17  KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG 76

Query: 291 GELWTILRDKGNFDDATTRFYTACVVEA---FDYLHSRNIIYRDLKPENLLLSTSGYVKL 347
           G+  + LR K   D+  T+      ++A     YL S+N I+RDL   N L+  +  +K+
Sbjct: 77  GDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKI 134

Query: 348 VDFGFAKKLIGPRYS 362
            DFG +++     YS
Sbjct: 135 SDFGMSRQEDDGIYS 149

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 54.1 bits (130), Expect = 4e-08
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL-WTILRDKGNFDDA 306
           R+Q  I  E EI+ + N   +VK +  F     + +L+E   GG L  T + D+    D 
Sbjct: 116 RRQ--ICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADV 173

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +     ++    YLH R+I++RD+KP NLL++++  VK+ DFG ++ L
Sbjct: 174 ARQ-----ILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL 218

Length = 353

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTR 309
           +  + E  IM + +   IVKL     +   ++++ME    GEL + L  +K + D A+  
Sbjct: 52  EKFLQEAYIMRQFDHPHIVKLIGVITENP-VWIVMELAPLGELRSYLQVNKYSLDLASLI 110

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            Y+  +  A  YL S+  ++RD+   N+L+S+   VKL DFG ++ L
Sbjct: 111 LYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 53.1 bits (127), Expect = 6e-08
 Identities = 19/40 (47%), Positives = 32/40 (80%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++   D+LHS  +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 304 DDATTRFYTACV-------VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           D+  T F  + V       +    YLH   II+RDLK  NLLL+  G +K+ DFG A+
Sbjct: 99  DNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 52.7 bits (126), Expect = 7e-08
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRF--YTACVVEAFDYLHSRNIIYRDLKPENLL 338
           LY++ME    G L   LR +G    +  +   ++  V E  +YL S+ +++RDL   N+L
Sbjct: 73  LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNIL 132

Query: 339 LSTSGYVKLVDFGFAKKLIGPR 360
           +S  G  K+ DFG A+  +G  
Sbjct: 133 VSEDGVAKVSDFGLAR--VGSM 152

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 53.2 bits (127), Expect = 7e-08
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L+     K+ L ++ E         + +  G       + +   ++    Y+H R I
Sbjct: 65  IVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI 124

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           ++RDLKP+NLL+S +G +KL DFG A+    P ++
Sbjct: 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGG--ELWTILRDKGNFDDATTRFYTA 313
           E  +M E   + IV+L+     +  L ++ E       +       +G  D  T + +T 
Sbjct: 48  EISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTY 107

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +++   + H   +++RDLKP+NLL++  G +KL DFG A+
Sbjct: 108 QLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLAR 148

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 254 MSEKEIMGEANCDF------IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
           MSE++ + EA          +V+LY     +K LY++ E    G L   LR + G     
Sbjct: 41  MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKD 100

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
                   V E  +YL   + I+RDL   N L+S++G VK+ DFG  + ++   Y
Sbjct: 101 MLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 26/116 (22%), Positives = 63/116 (54%), Gaps = 4/116 (3%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR---- 298
           ++++ + +Q  + E +++ + +   ++K   +F +   L +++E    G+L  +++    
Sbjct: 39  EMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKK 98

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            K    + T   Y   +  A +++HS+ I++RD+KP N+ ++ +G VKL D G  +
Sbjct: 99  QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 51.9 bits (124), Expect = 1e-07
 Identities = 20/36 (55%), Positives = 29/36 (80%)

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            D+LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 27/116 (23%), Positives = 63/116 (54%), Gaps = 4/116 (3%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----R 298
           ++++ + +Q  + E +++ + N   ++K   +F +   L +++E    G+L  ++    +
Sbjct: 39  EMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKK 98

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            K    + T   Y   +  A +++HSR +++RD+KP N+ ++ +G VKL D G  +
Sbjct: 99  QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 9/103 (8%)

Query: 268 IVKLYKTF--KDKK---YLYMLMESCLGGELWTI----LRDKGNFDDATTRFYTACVVEA 318
           +VK Y  +  KD K    L++++E C GG +  +    L+     ++    +     +  
Sbjct: 77  VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG 136

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
             +LH    I+RD+K  N+LL+T G VKLVDFG + +L   R 
Sbjct: 137 LQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL 179

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L+     K+ L  + E         +++  G       R +   ++    Y+H ++I
Sbjct: 65  IVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI 124

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++RDLKP+NLL+S  G +KL DFG A+
Sbjct: 125 LHRDLKPQNLLISYLGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 19/178 (10%)

Query: 190 NLDDLRTANIVAADPEGVSCLV--IDQETFNQL-------ISSLDEIRTKYVDETSERRR 240
           +LDD+  + +   DP G+  LV  +   T+ Q+          L  I+   V E  E   
Sbjct: 2   SLDDIDLSAL--RDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEI 59

Query: 241 APQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD- 299
             +I   ++  H  +     G     FI K      D+  L+++ME C  G +  ++++ 
Sbjct: 60  KLEINMLKKYSHHRNIATYYGA----FIKKSPPGHDDQ--LWLVMEFCGAGSVTDLVKNT 113

Query: 300 KGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           KGN   +    +    ++    +LH+  +I+RD+K +N+LL+ +  VKLVDFG + +L
Sbjct: 114 KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 171

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++  + E  +M   N   IVKL       +  Y++ME   GG+L + LRD         
Sbjct: 42  EKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDA-----RVE 96

Query: 309 RFYTA--CVVEAFD----------YLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFG 351
           RF      + E  D          YL   + I+RDL   N L+S  GY     VK+ DFG
Sbjct: 97  RFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156

Query: 352 FAKKLIGPRY 361
            A+ +    Y
Sbjct: 157 LARDIYKSDY 166

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGN 302
               +    E EI+     D IVK YK       ++ L ++ME    G L   L + +  
Sbjct: 46  AEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRER 104

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D      Y + + +  +YL S+  ++RDL   N+L+ +   VK+ DFG  K L
Sbjct: 105 LDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 28/74 (37%), Positives = 40/74 (54%)

Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +      T   ++   YLHS N+I+RD+K  N+LL+ 
Sbjct: 97  WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE 156

Query: 342 SGYVKLVDFGFAKK 355
            G VKL DFG A K
Sbjct: 157 PGQVKLADFGSASK 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA-TTRFYTACVVEAFDYLHSRN 326
           IV L+     +K L ++ E  L  +L   L D GN  +    + +   ++   +Y H R 
Sbjct: 66  IVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++  G +KL DFG A+
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E +IM E   + I+ L   + +  ++ ++M+  +  +L  ++  K    ++  +     +
Sbjct: 70  ELKIMNEIKHENIMGLVDVYVEGDFINLVMD-IMASDLKKVVDRKIRLTESQVKCILLQI 128

Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +   + LH    ++RDL P N+ +++ G  K+ DFG A++   P YS
Sbjct: 129 LNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYS 175

Length = 335

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 50.5 bits (120), Expect = 5e-07
 Identities = 27/72 (37%), Positives = 39/72 (54%)

Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +      T   ++   YLHS N+I+RD+K  N+LL+ 
Sbjct: 101 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE 160

Query: 342 SGYVKLVDFGFA 353
            G VKL DFG A
Sbjct: 161 PGQVKLADFGSA 172

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 50.1 bits (119), Expect = 5e-07
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 281 LYMLMESCLGGELWTILRD-KGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           L+++ME C  G +  ++++ KGN   +    +    ++    +LH   +I+RD+K +N+L
Sbjct: 84  LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 143

Query: 339 LSTSGYVKLVDFGFAKKL 356
           L+ +  VKLVDFG + +L
Sbjct: 144 LTENAEVKLVDFGVSAQL 161

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 42  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 101

Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 102 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 50.2 bits (120), Expect = 6e-07
 Identities = 25/72 (34%), Positives = 36/72 (50%)

Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +          ++   YLHS   I+RD+K  N+LL+ 
Sbjct: 91  WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE 150

Query: 342 SGYVKLVDFGFA 353
            G VKL DFG A
Sbjct: 151 PGTVKLADFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 49.9 bits (119), Expect = 6e-07
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           MSE E + EA        + +V+LY     ++ +Y++ E    G L   LR+ G      
Sbjct: 41  MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK-RFQP 99

Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           ++    C  V E   YL S+  I+RDL   N L+   G VK+ DFG ++ ++   Y+
Sbjct: 100 SQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 50.6 bits (121), Expect = 7e-07
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 21/122 (17%)

Query: 254 MSEKEIM---GEA----NCDF--IVKLYKTF--KDKK------YLYMLMESCLGGELWTI 296
           MSE +      E     NCDF  IVK ++ F  KD +       + ++++    G+L   
Sbjct: 70  MSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQE 129

Query: 297 LRDKGN----FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
           ++ +      F +         V+ A  ++HS+++I+RD+K  N+LL ++G VKL DFGF
Sbjct: 130 IKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189

Query: 353 AK 354
           +K
Sbjct: 190 SK 191

Length = 496

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 49.6 bits (118), Expect = 8e-07
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 2/118 (1%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
           T   Q  + E  +M     D +V+LY     ++ +Y++ E    G L   L+        
Sbjct: 42  TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVL 101

Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
             +   ++A + E   Y+  +N I+RDL+  N+L+S S   K+ DFG A+ +    Y+
Sbjct: 102 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 25/83 (30%), Positives = 52/83 (62%), Gaps = 5/83 (6%)

Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
           +++F D   +  LME+    +L+ +++ + +  +   +++   ++    Y+HS N+++RD
Sbjct: 77  FESFNDVYIVQELMET----DLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRD 131

Query: 332 LKPENLLLSTSGYVKLVDFGFAK 354
           LKP NLLL+T+  +K+ DFG A+
Sbjct: 132 LKPSNLLLNTNCDLKICDFGLAR 154

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           +KLY +    K   ++M+    G+L+ +L+ +G   +A  +     +VEA + LH  NII
Sbjct: 72  IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNII 131

Query: 329 YRDLKPENLLLSTS-GYVKLVDFGFAK 354
           + D+K EN+L   +   + L D+G  K
Sbjct: 132 HNDIKLENVLYDRAKDRIYLCDYGLCK 158

Length = 267

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA-TTRFYTACVVEAFDYLHSRN 326
           IV L+      K L ++ E  L  +L   + D GN       + +   ++    Y H R 
Sbjct: 66  IVTLHDIVHTDKSLTLVFEY-LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK 124

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++  G +KL DFG A+
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG----NF 303
           +++ +MSE +IM    N + IV L         + ++ E C  G+L   LR K       
Sbjct: 81  EREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTL 140

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +D  +  ++  V +   +L S+N I+RDL   N+LL+    VK+ DFG A+
Sbjct: 141 EDLLS--FSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA-TTRFYTACVVEAFDYLHSRN 326
           IV L+     ++ L ++ E  L  +L   L + GN       + +   ++    Y H R 
Sbjct: 65  IVTLHDIIHTERCLTLVFEY-LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           I++RDLKP+NLL++  G +KL DFG A+
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
           Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G      D 
Sbjct: 44  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +F +  V EA +YL + N ++RDL   N+L+S     K+ DFG  K+
Sbjct: 104 LLKF-SLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 14/118 (11%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           E   +  +M E EIM + +  +IV++    + +  L ++ME   GG L   L  K    D
Sbjct: 35  EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEA-LMLVMEMASGGPLNKFLSGK---KD 90

Query: 306 ATTRFYTACVVE-------AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             T    + VVE          YL  +N ++RDL   N+LL    Y K+ DFG +K L
Sbjct: 91  EIT---VSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKAL 145

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE + + EA          +V+LY     ++ ++++ E    G L   LR+ KG     
Sbjct: 41  MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKL--G 98

Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T      C  V EA +YL S   I+RDL   N L+     VK+ DFG A+ ++  +Y+
Sbjct: 99  TEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 18/106 (16%)

Query: 268 IVKLYKTF---KDKKYLYMLMESCLGGE--LWTILRD-----KGNFDDATTRFYTACVVE 317
           +V L + F    DK  +Y+L +     E  LW I++      + +   +  +     ++ 
Sbjct: 64  VVSLVEVFLEHADKS-VYLLFDYA---EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILN 119

Query: 318 AFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIGP 359
              YLHS  +++RDLKP N+L+       G VK+ D G A+    P
Sbjct: 120 GVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAP 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 28/72 (38%), Positives = 39/72 (54%)

Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +      T   ++   YLHS N+I+RD+K  N+LLS 
Sbjct: 91  WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 150

Query: 342 SGYVKLVDFGFA 353
            G VKL DFG A
Sbjct: 151 PGLVKLGDFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDK---KYLYMLMESCLGGELWTILRD-KGNFDDATTRFY 311
           E EI+   + + IVK YK   +K   + L ++ME    G L   L+  +   +      +
Sbjct: 56  EIEILRTLDHENIVK-YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLF 114

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++ + +  DYL S+  I+RDL   N+L+ +   VK+ DFG AK
Sbjct: 115 SSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAK 157

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 4/79 (5%)

Query: 281 LYMLMESCLGGELWTILRD-KGNF--DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
           LY++M  C GG+L+  L++ KG    ++    ++   +  A  YLH ++I++RDLK +N+
Sbjct: 75  LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQ-IAMALQYLHEKHILHRDLKTQNV 133

Query: 338 LLSTSGYVKLVDFGFAKKL 356
            L+ +  +K+ D G A+ L
Sbjct: 134 FLTRTNIIKVGDLGIARVL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           YLHS  I++RD+KP NLL++++  +K+ DFG A+ 
Sbjct: 118 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV 152

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAKKLIGPRYS 362
           + Y+  +  A  Y+HS+ I +RDLKP+NLL+  + + +KL DFG AK L+  + S
Sbjct: 173 KLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS 227

Length = 440

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
           MSE++ + EA          +V+LY    ++  + ++ E    G L   LR  +G F   
Sbjct: 41  MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQE 100

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T       V E   YL S N+I+RDL   N L+  +  VK+ DFG  + ++  +Y+
Sbjct: 101 TLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q+    +E  I+   N   I++L  TF   K+  +++      +L+  L  K N 
Sbjct: 121 VIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR-YKTDLYCYLAAKRNI 179

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
                      V+ A  YLH   II+RD+K EN+ ++  G V L DFG A
Sbjct: 180 AICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAA 229

Length = 391

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           + E  I+ + +   IV+L      K+ +Y++ME   GG+  T LR +G            
Sbjct: 41  LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMV 100

Query: 314 CVVEA-FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
               A  +YL S++ I+RDL   N L++    +K+ DFG +++
Sbjct: 101 ENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSRE 143

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 6/109 (5%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           E R  +H M  + ++G  +     +  + F D   +  LM    G +L  I++ +   DD
Sbjct: 66  ELRLLKH-MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM----GADLNNIVKCQKLTDD 120

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              +F    ++    Y+HS +II+RDLKP NL ++    +K++DFG A+
Sbjct: 121 HV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 168

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 276 KDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
           KDK   Y++ E  +  +L  +L     +F +   + +   ++E  +Y H +N ++RD+K 
Sbjct: 86  KDKGAFYLVFEY-MDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKC 144

Query: 335 ENLLLSTSGYVKLVDFGFAK 354
            N+LL+  G +KL DFG A+
Sbjct: 145 SNILLNNKGQIKLADFGLAR 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           E  +YLH  +I++RD+K  N+L+   G +K+ DFG A+   GP  +
Sbjct: 126 EGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPN 171

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 47.8 bits (113), Expect = 5e-06
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%)

Query: 236 SERRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW 294
            ER  A ++   +R    + +E   +G  N + I+K+ +  + +   YM+ +     +L+
Sbjct: 192 CERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQK-YDFDLY 250

Query: 295 TILRDKGNFD--DA----TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           + + D   FD  D      TR     ++ A +Y+H + +I+RD+K EN+ L+  G + L 
Sbjct: 251 SFMYD-EAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLG 309

Query: 349 DFGFAKKLIGPR 360
           DFG A      R
Sbjct: 310 DFGTAMPFEKER 321

Length = 501

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           Y+H   I++RD+K  N+L++  G +KL DFG A+
Sbjct: 134 YIHRNKILHRDMKAANILITKDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 47.8 bits (113), Expect = 6e-06
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 12/53 (22%)

Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK------------LIGPRYS 362
           LH   I++RD+KPENLL++  G VK++DFG A              ++ PRYS
Sbjct: 325 LHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYS 377

Length = 507

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 255 SEKEIMGEANCDFIVKLYKTFKDKKYLYMLME--SCLGGELWTILRDKGNFDDATTRFYT 312
            E +I+   +   I+ L   ++ K  + M+M    C   +L+T +   G           
Sbjct: 135 REIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC---DLFTYVDRSGPLPLEQAITIQ 191

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++EA  YLH R II+RD+K EN+ L       L DFG A KL
Sbjct: 192 RRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235

Length = 392

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 46.7 bits (111), Expect = 8e-06
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF--DDATTRFYTA 313
           E  ++ E     IV+L      +K LY++ E  L  +L   +    +F  +    + Y  
Sbjct: 51  EISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY-LDLDLKKHMDSSPDFAKNPRLIKTYLY 109

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
            ++    Y HS  +++RDLKP+NLL+      +KL DFG A+
Sbjct: 110 QILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151

Length = 294

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 47.5 bits (113), Expect = 8e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
           L+ + E   G  L  +L   G      T      V++A    H++ I++RDLKP+N+++S
Sbjct: 54  LFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVS 113

Query: 341 TSG---YVKLVDFGFAKKLIGPR 360
            +G   + K++DFG    L G R
Sbjct: 114 QTGVRPHAKVLDFGIGTLLPGVR 136

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYTAC 314
           E +IM +   D +V+LY    +++ +Y++ E    G L   L+  +G           A 
Sbjct: 51  EAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAA 110

Query: 315 -VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            + E   YL SRN I+RDL   N+L+  +   K+ DFG A+ +
Sbjct: 111 QIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLI 153

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 11/114 (9%)

Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
               E +++ + +   IVK + +F ++    ++ E C G +L   L +            
Sbjct: 48  QANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEE---LKHTGKTLS 104

Query: 312 TACVVEAF-------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
              V E F        Y+H R I++RDLK +N+ L  +  +K+ DFG ++ L+G
Sbjct: 105 ENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN-LLKIGDFGVSRLLMG 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 274 TFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLK 333
            F+D   +Y++    +G +L  I++ +    D   +F    ++    Y+HS  II+RDLK
Sbjct: 91  DFQD---VYLVTH-LMGADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLK 145

Query: 334 PENLLLSTSGYVKLVDFGFAKKL 356
           P N+ ++    +K++DFG A+  
Sbjct: 146 PSNIAVNEDCELKILDFGLARHT 168

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
           +Q+Q  +SE  IMG+ +   I++L       K   ++ E    G L   LRD  G F   
Sbjct: 48  KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSY 107

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL   N ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 108 QLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           F+  C     +Y+HS+ +++RDLKP+N+LL   G V ++D+G A 
Sbjct: 119 FHKIC--ATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161

Length = 932

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRF-Y 311
           ++E  +M     D +VKL+     K+ +Y++ E    G L   L+ D+G+         +
Sbjct: 49  LAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 107

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +A + E   ++  RN I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 108 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 150

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 283 MLMESCLGGELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           ++ME    G L   L R+K   +      Y   + +  DYL SR  ++RDL   N+L+ +
Sbjct: 85  LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 144

Query: 342 SGYVKLVDFGFAKKL 356
              VK+ DFG  K +
Sbjct: 145 EHQVKIGDFGLTKAI 159

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)

Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85

Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139

Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++ K I+G  N     K  + F+D   +Y++ME         I  D    D     +  
Sbjct: 71  LVNHKNIIGLLNVFTPQKSLEEFQD---VYLVMELMDANLCQVIQMD---LDHERMSYLL 124

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+ 
Sbjct: 125 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 167

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 5e-05
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 279 KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           K L ++ME    G L   L  K   + A    +   + E   YLHS++ I+RDL   N+L
Sbjct: 81  KGLQLIMEYVPLGSLRDYL-PKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVL 139

Query: 339 LSTSGYVKLVDFGFAK 354
           L     VK+ DFG AK
Sbjct: 140 LDNDRLVKIGDFGLAK 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           ++ E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  +       
Sbjct: 43  LLREANVMQQLDNPYIVRMIGICEAESWM-LVMELAELGPLNKFLQKNKHVTEKNITELV 101

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 102 HQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 145

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|236969 PRK11753, PRK11753, DNA-binding transcriptional dual regulator Crp; Provisional

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 40  IIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDLRTANIV 98
           +I  G + +T + I KG V V +K     +E  +  L +GDF GE  L +    R+A + 
Sbjct: 31  LIHAGEKAETLYYIVKGSVAVLIKD-EEGKEMILSYLNQGDFIGELGLFEEGQERSAWVR 89

Query: 99  AADPEGVSCLV--IDQETFNQLISSLDEI 125
           A       C V  I  + F QLI    +I
Sbjct: 90  AKTA----CEVAEISYKKFRQLIQVNPDI 114

Length = 211

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
           +Y + E  LG +L  +L  +   +    +++   ++    Y+HS  +++RDLKP N+L++
Sbjct: 85  IYFVTE-LLGTDLHRLLTSR-PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN 142

Query: 341 TSGYVKLVDFGFAK 354
            +  +K+ DFG A+
Sbjct: 143 ENCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 43.8 bits (103), Expect = 8e-05
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V    ++L SR  I+RDL   N+LLS +  VK+ DFG A+ +
Sbjct: 179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 224

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +   + Y   ++++ D++H   I +RD+KPEN+L+     +KL DFG  +
Sbjct: 97  LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK-DDILKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 2/118 (1%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
             +QQ    E + +       ++ L+      + +Y++ E    G L   LR  +G    
Sbjct: 43  LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLP 102

Query: 306 ATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
             +    AC V E   YL  +N I+RDL   N+L+      K+ DFG A+ +    Y 
Sbjct: 103 VASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+ + +G +L  I++ +    D   +F    ++    Y+HS  II+RDLKP N+ ++   
Sbjct: 97  LVTNLMGADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155

Query: 344 YVKLVDFGFAKK 355
            ++++DFG A++
Sbjct: 156 ELRILDFGLARQ 167

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 118 IAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V    ++L SR  I+RDL   N+LLS +  VK+ DFG A+ +
Sbjct: 178 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 223

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 13/61 (21%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKL------------IGPRY 361
           ++ A D LHS  I++RD+KP+N++ S  SG  K++D G A  L            + PRY
Sbjct: 264 ILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRY 323

Query: 362 S 362
           +
Sbjct: 324 A 324

Length = 566

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 34/155 (21%), Positives = 76/155 (49%), Gaps = 12/155 (7%)

Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 78

Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +   N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 79  ISLLNVFTPQKSLEEFQD---VYLVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 132

Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           P+    + +   + E  IM + N   IV+L     ++   ++L+E   GG+L + LR+  
Sbjct: 45  PESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENR 104

Query: 302 NFDDATTRF------YTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFG 351
              +  +        + A  V +   YL   + I+RD+   N LL+  G     K+ DFG
Sbjct: 105 PRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG 164

Query: 352 FAKKLIGPRY 361
            A+ +    Y
Sbjct: 165 MARDIYRASY 174

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 19/46 (41%), Positives = 29/46 (63%)

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V +  ++L SR  I+RDL   N+LLS +  VK+ DFG A+ +
Sbjct: 184 YSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 229

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     ++ +Y++ E    G L   L+          +    
Sbjct: 49  LAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDM 107

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A + E   ++  +N I+RDL+  N+L+S +   K+ DFG A+ +    Y+
Sbjct: 108 AAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 12/155 (7%)

Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D  T   +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 29  IGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH----KNI 82

Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +   N     K  + F+D   +Y++ME  +   L  ++  + + +  +   Y   ++   
Sbjct: 83  ISLLNVFTPQKSLEEFQD---VYLVME-LMDANLCQVIHMELDHERMSYLLYQ--MLCGI 136

Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 137 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYM--LMESCLGGELWTILRDKGNFDDAT 307
            + I+ E  +M   +   +V+L       +   +  LM   LG  L  +   K N     
Sbjct: 53  NKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMP--LGCLLDYVRNHKDNIGSQY 110

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              +   + +   YL  + +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 111 LLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 291 GELWTILRDKGNFDDATTR---FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKL 347
            E+  +L D G  +  TT     +T  V    ++L S+N ++RDL   N+LL+    VK+
Sbjct: 220 SEVKNLLSDDG-SEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKI 278

Query: 348 VDFGFAKKLI 357
            DFG A+ ++
Sbjct: 279 CDFGLARDIM 288

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 318 AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           A DY+H   II+RD+K EN+L++    + L DFG A
Sbjct: 272 AIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAA 307

Length = 461

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 16/41 (39%), Positives = 29/41 (70%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           +++   Y+H+  II+RDLKP NL ++    +K++DFG A++
Sbjct: 127 MLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 167

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           V +  D+L S+N I+RD+   N+LL+     K+ DFG A+
Sbjct: 221 VAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLAR 260

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 17/34 (50%), Positives = 25/34 (73%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           Y+HS  II+RDLKP NL ++    +K++DFG A+
Sbjct: 132 YIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR 165

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 40.4 bits (94), Expect = 9e-04
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
           T   +  + E +IM +   D +V+LY    ++  +Y++ E    G L   L+D +G    
Sbjct: 42  TMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKDGEGRALK 100

Query: 306 ATTRFYTACVVEA-FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
                  A  V A   Y+   N I+RDL+  N+L+      K+ DFG A+
Sbjct: 101 LPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLAR 150

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 14/139 (10%)

Query: 232 VDETSERRRAPQIV----ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V +  E R A + V      R++   ++E  +M E NC  +V+L       +   ++ME 
Sbjct: 31  VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 90

Query: 288 CLGGELWTILRD-----KGNFDDATTRF-----YTACVVEAFDYLHSRNIIYRDLKPENL 337
              G+L + LR      + N   A             + +   YL++   ++RDL   N 
Sbjct: 91  MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNC 150

Query: 338 LLSTSGYVKLVDFGFAKKL 356
           +++    VK+ DFG  + +
Sbjct: 151 MVAEDFTVKIGDFGMTRDI 169

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
           +    +YL S+N I+RDL   N +L+ +  V + DFG +KK+    Y
Sbjct: 122 IASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY 168

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 265 CDFIVKLY-----KTFKDKKYLYMLMESCLGGEL--WTILRDKGN---FDDATTRFYTAC 314
             +IV+L      +    K  LY++ E  L  +L  +     +G        T + +   
Sbjct: 60  SIYIVRLLDVEHVEEKNGKPSLYLVFEY-LDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQ 118

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIGP 359
           +++   + H   +++RDLKP+NLL+    G +K+ D G  +    P
Sbjct: 119 LLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP 164

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
           T   +  ++E +IM +     +++LY     ++ +Y++ E    G L   L+        
Sbjct: 42  TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALK 101

Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +     A V     YL ++N I+RDL   N+L+  +   K+ DFG A+
Sbjct: 102 LPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLAR 151

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 15/40 (37%), Positives = 26/40 (65%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++E   YLH++ II+RD+K EN+ ++    V + D G A+
Sbjct: 166 ILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQ 205

Length = 357

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 39.7 bits (92), Expect = 0.001
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           + +   YL  R +++RDL   N+L+ +  +VK+ DFG A+ L G
Sbjct: 118 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 39.7 bits (92), Expect = 0.001
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIGP 359
           +++   YLH+  +++RDLKP N+L+       G VK+ D GFA+    P
Sbjct: 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIGP 359
           +++   YLH+  +++RDLKP N+L+       G VK+ D GFA+    P
Sbjct: 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDATTRFYTACVVEAFDYLHSR 325
           I+    +F     LY++      G    +L+        +    F    V+ A DY+HS+
Sbjct: 61  ILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK 120

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             I+R +K  ++LLS  G V L    ++  +I
Sbjct: 121 GFIHRSVKASHILLSGDGKVVLSGLRYSVSMI 152

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
           +Q++  +SE  IMG+ +   I+ L       + + ++ E    G L + LR + G F   
Sbjct: 47  KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI 106

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL   N ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 107 QLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 39.7 bits (92), Expect = 0.003
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-- 300
           ++ R++  ++ E  +M E     IV+    F +K  + LY+LME C  G+L   ++    
Sbjct: 51  LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYK 110

Query: 301 --GNFDDATTRFYTACVVEAFDYLHS-------RNIIYRDLKPENLLLST 341
             G  ++      T  ++ A  Y H+         +++RDLKP+N+ LST
Sbjct: 111 MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160

Length = 1021

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           V +   +L S+N I+RDL   N+LL+     K+ DFG A+ +
Sbjct: 223 VAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI 264

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 281 LYMLMESCLGGELWTILRD------KGNFDDA-------TTRFYTAC---VVEAFDYLHS 324
           LY+++E    G L   LR         + DD        T +   +    V    ++L S
Sbjct: 91  LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS 150

Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +  I+RDL   N+L++    +K+ DFG A+
Sbjct: 151 KKCIHRDLAARNVLVTEDHVMKIADFGLAR 180

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNFD 304
           T   +  + E +IM +   D +V LY    ++  +Y++ E    G L   L+  D     
Sbjct: 42  TMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEP-IYIVTEFMGKGSLLDFLKEGDGKYLK 100

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
                   A + +   Y+   N I+RDL+  N+L+  +   K+ DFG A+ +    Y+
Sbjct: 101 LPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           V    +YL SR  I+RDL   N+L++    +K+ DFG A+
Sbjct: 143 VARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	362
KOG0614|consensus	732		100.0
KOG0595|consensus	429		100.0
KOG0615|consensus	475		100.0
KOG0598|consensus	357		100.0
KOG0616|consensus	355		100.0
KOG0605|consensus	550		100.0
KOG0592|consensus	604		100.0
KOG0575|consensus	592		99.98
KOG0581|consensus	364		99.97
KOG0611|consensus	668		99.97
KOG0593|consensus	396		99.97
KOG0661|consensus	538		99.97
KOG0600|consensus	560		99.97
KOG0659|consensus	318		99.96
KOG0583|consensus	370		99.96
KOG0585|consensus	576		99.96
KOG0591|consensus	375		99.96
KOG0610|consensus	459		99.96
KOG0694|consensus	694		99.96
KOG0663|consensus	419		99.96
KOG0580|consensus	281		99.96
KOG0597|consensus	808		99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
KOG0198|consensus	313		99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
KOG0588|consensus	786		99.95
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
KOG0594|consensus	323		99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
KOG0608|consensus	1034		99.95
KOG0192|consensus	362		99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
KOG1113|consensus	368		99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
KOG0197|consensus	468		99.95
KOG0194|consensus	474		99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
KOG0658|consensus	364		99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
KOG0582|consensus	516		99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
KOG0660|consensus	359		99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
KOG0662|consensus	292		99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
KOG0586|consensus	596		99.94
KOG0612|consensus	1317		99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.94
KOG0032|consensus	382		99.94
KOG0589|consensus	426		99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
KOG0033|consensus	355		99.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.93
KOG0599|consensus	411		99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
KOG0578|consensus	550		99.93
PHA03212	391	serine/threonine kinase US3; Provisional	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
KOG0667|consensus	586		99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
KOG0690|consensus	516		99.93
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
KOG4250|consensus	732		99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.92
KOG1187|consensus	361		99.92
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.92
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.92
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.92
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
KOG1989|consensus	738		99.92
KOG1152|consensus	772		99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.92
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.92
KOG4236|consensus	888		99.92
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.92
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.92
PHA03207	392	serine/threonine kinase US3; Provisional	99.92
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.92
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.92
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.91
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.91
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.91
PTZ00283	496	serine/threonine protein kinase; Provisional	99.91
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.91
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.91
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.91
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.91
KOG4717|consensus	864		99.91
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
PTZ00036	440	glycogen synthase kinase; Provisional	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.91
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.91
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.91
KOG0574|consensus	502		99.91
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.91
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.91
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.91
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.91
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.91
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.91
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.9
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.9
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.9
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.9
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.9
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.9
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.9
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.9
KOG0193|consensus	678		99.9
PHA03209	357	serine/threonine kinase US3; Provisional	99.9
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.9
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.9
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.9
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.9
KOG0666|consensus	438		99.9
KOG0696|consensus	683		99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
PHA02988	283	hypothetical protein; Provisional	99.9
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.9
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.9
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.9
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.9
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.9
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.9
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.9
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.9
KOG0986|consensus	591		99.9
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.9
KOG1035|consensus	1351		99.9
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.9
PHA03211	461	serine/threonine kinase US3; Provisional	99.9
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.9
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.9
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.9
KOG0607|consensus	463		99.9
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.9
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.9
PHA03210	501	serine/threonine kinase US3; Provisional	99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.9
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.9
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
KOG0579|consensus	1187		99.9
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.9
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.9
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.9
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
KOG0577|consensus	948		99.9
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.9
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.9
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.9
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
KOG1094|consensus	807		99.9
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.9
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.9
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.9
KOG0201|consensus	467		99.9
KOG1026|consensus	774		99.9
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.9
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.89
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
KOG2345|consensus	302		99.89
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.89
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.89
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.89
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.89
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.89
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.89
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.89
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.89
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.89
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.89
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.89
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.89
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.89
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.89
KOG0614|consensus	732		99.89
KOG0695|consensus	593		99.89
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.89
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.89
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.89
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.89
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.89
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.89
KOG0604|consensus	400		99.89
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.89
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.89
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.89
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.89
KOG1095|consensus	1025		99.89
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.89
KOG4279|consensus	1226		99.89
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.89
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.89
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.89
KOG4645|consensus	1509		99.89
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.89
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.89
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.89
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.89
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.89
KOG0984|consensus	282		99.89
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.89
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.89
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.88
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.88
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.88
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.88
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.88
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.88
PLN00009	294	cyclin-dependent kinase A; Provisional	99.88
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.88
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.88
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.88
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.88
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.88
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.88
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.88
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.88
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.88
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.88
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.88
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.88
PTZ00284	467	protein kinase; Provisional	99.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.88
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.88
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.88
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.88
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.88
KOG1163|consensus	341		99.88
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.88
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.88
KOG0196|consensus	996		99.88
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.87
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.87
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.87
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.87
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.87
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.87
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.87
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.87
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.87
KOG0584|consensus	632		99.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.87
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.87
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.87
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.87
KOG4721|consensus	904		99.87
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.87
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.87
KOG4257|consensus	974		99.87
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.87
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.87
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.87
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.86
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.86
KOG0587|consensus	953		99.86
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.86
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.86
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.86
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.86
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.86
KOG2052|consensus	513		99.86
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.86
KOG1151|consensus	775		99.86
KOG0668|consensus	338		99.86
PHA02882	294	putative serine/threonine kinase; Provisional	99.86
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.86
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.86
KOG3653|consensus	534		99.86
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.86
KOG0669|consensus	376		99.86
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.86
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.85
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.85
KOG4278|consensus	1157		99.85
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.85
PRK10345	210	hypothetical protein; Provisional	99.85
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.85
KOG0983|consensus	391		99.85
KOG1006|consensus	361		99.85
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.85
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.85
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.85
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.85
KOG0596|consensus	677		99.85
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.85
KOG0664|consensus	449		99.84
KOG0576|consensus	829		99.84
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.83
KOG1345|consensus	378		99.82
smart00090	237	RIO RIO-like kinase.	99.82
KOG1165|consensus	449		99.82
KOG0199|consensus	1039		99.82
KOG0671|consensus	415		99.81
KOG0603|consensus	612		99.81
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.81
KOG1164|consensus	322		99.81
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.8
PRK12274	218	serine/threonine protein kinase; Provisional	99.8
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.8
PRK09392	236	ftrB transcriptional activator FtrB; Provisional	99.79
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.79
KOG0670|consensus	752		99.79
KOG1027|consensus	903		99.78
KOG1025|consensus	1177		99.78
PRK14879	211	serine/threonine protein kinase; Provisional	99.77
KOG1167|consensus	418		99.77
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.76
KOG0665|consensus	369		99.75
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.75
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.75
KOG0200|consensus	609		99.75
PRK11753	211	DNA-binding transcriptional dual regulator Crp; Pr	99.75
KOG1290|consensus	590		99.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.74
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.74
COG0664	214	Crp cAMP-binding proteins - catabolite gene activa	99.73
cd00038	115	CAP_ED effector domain of the CAP family of transc	99.73
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.7
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.7
PRK10402	226	DNA-binding transcriptional activator YeiL; Provis	99.7
PF00027	91	cNMP_binding: Cyclic nucleotide-binding domain; In	99.69
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.69
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.68
PRK11161	235	fumarate/nitrate reduction transcriptional regulat	99.68
smart00100	120	cNMP Cyclic nucleotide-monophosphate binding domai	99.67
KOG1166|consensus	974		99.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.62
PLN02868	413	acyl-CoA thioesterase family protein	99.6
TIGR03697	193	NtcA_cyano global nitrogen regulator NtcA, cyanoba	99.58
KOG0498|consensus	727		99.58
PRK09391	230	fixK transcriptional regulator FixK; Provisional	99.57
KOG1113|consensus	368		99.56
PRK13918	202	CRP/FNR family transcriptional regulator; Provisio	99.53
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.5
KOG0500|consensus	536		99.5
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.5
KOG0590|consensus	601		99.47
COG2905	610	Predicted signal-transduction protein containing c	99.45
PLN00181	793	protein SPA1-RELATED; Provisional	99.45
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.45
KOG1024|consensus	563		99.45
KOG0603|consensus	612		99.42
KOG0499|consensus	815		99.42
KOG4158|consensus	598		99.38
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.26
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.19
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.16
KOG3087|consensus	229		99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.13
KOG1240|consensus	1431		99.11
KOG0590|consensus	601		99.05
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.95
KOG0606|consensus	1205		98.93
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.91
KOG2968|consensus	1158		98.91
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.88
KOG0601|consensus	524		98.81
KOG0601|consensus	524		98.79
KOG1243|consensus	690		98.71
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.7
KOG1023|consensus	484		98.68
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.64
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.63
KOG0501|consensus	971		98.57
KOG0195|consensus	448		98.5
KOG3741|consensus	655		98.48
PRK09902	216	hypothetical protein; Provisional	98.42
KOG2968|consensus	1158		98.33
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.23
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.23
KOG1266|consensus	458		98.22
PF01636	239	APH: Phosphotransferase enzyme family This family	98.2
KOG1033|consensus	516		98.17
KOG1235|consensus	538		98.16
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.99
PF04831	153	Popeye: Popeye protein conserved region; InterPro:	97.97
PLN02876	822	acyl-CoA dehydrogenase	97.92
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.87
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.79
KOG0606|consensus	1205		97.72
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.71
PRK11832	207	putative DNA-binding transcriptional regulator; Pr	97.67
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.66
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.6
PRK10593	297	hypothetical protein; Provisional	97.41
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.36
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.29
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.26
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.15
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.12
KOG2268|consensus	465		97.04
PRK05231	319	homoserine kinase; Provisional	96.91
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.89
KOG3542|consensus	1283		96.88

>KOG0614|consensus

Probab=100.00  E-value=6.4e-55  Score=396.15  Aligned_cols=346  Identities=42%  Similarity=0.717  Sum_probs=286.0

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      ++....++.+| ++.++.+|..+|..++|++|++|++|||+|+.+|++.+|++.|.      ++.+.++.+++|.+|||+
T Consensus       155 Ai~~NdFLknL-d~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~------~~g~ll~~m~~gtvFGEL  227 (732)
T KOG0614|consen  155 AIQKNDFLKNL-DASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVS------REGKLLGKMGAGTVFGEL  227 (732)
T ss_pred             HHHhhHHHHhh-hHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEe------eCCeeeeccCCchhhhHH
Confidence            45667888999 99999999999999999999999999999999999999999998      555889999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH----Hhhhhhhhh--------hccccCcEE
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE----RRRLNEEFR--------SLRLSDLRV  153 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~----~~~~~~~~~--------~~~~~~~~~  153 (362)
                      |++++++|+|||+|+  +++.+|+|+|+.|++++......+..-+.++.+    +..+++++.        ...++.-..
T Consensus       228 AILynctRtAsV~al--t~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~y  305 (732)
T KOG0614|consen  228 AILYNCTRTASVRAL--TDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEY  305 (732)
T ss_pred             HHHhCCcchhhhhhh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCce
Confidence            999999999999999  569999999999999999877766544444433    333333321        111222223


Q ss_pred             EEEecc-cc-e-----ecEEEEEecCCCCCceeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        154 ITTLGV-GG-F-----GRVELVQIAGDPSRSFALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       154 ~~~lg~-G~-~-----g~v~~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      +-.-|+ |. |     |+|...+....+.++..++.++++++||     .++.|+|+++|..| +|.|++|||++|++++
T Consensus       306 Iirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~FGE~al~~edvRtAniia~~~-gv~cl~lDresF~~li  384 (732)
T KOG0614|consen  306 IIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDYFGERALLGEDVRTANIIAQAP-GVECLTLDRESFKKLI  384 (732)
T ss_pred             EEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccchhhHHHhhccCccchhhhccCC-CceEEEecHHHHHHhc
Confidence            322332 22 1     6776666555567889999999999998     46899999999876 6999999999999999


Q ss_pred             cchHHhhhhccchhhhhc---------------------------------------------------cccccccchhh
Q psy14740        222 SSLDEIRTKYVDETSERR---------------------------------------------------RAPQIVETRQQ  250 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~  250 (362)
                      |++.++..+.+.....+-                                                   ....+++....
T Consensus       385 G~l~~l~ek~~~D~~r~A~~~~~~~~~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQq  464 (732)
T KOG0614|consen  385 GDLEELKEKDYGDEERRASVVIKEDFAEEFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQ  464 (732)
T ss_pred             ccHHHhhhhhccchhhhhhhHHHHHHHhhhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHH
Confidence            999999944322221110                                                   00112344456


Q ss_pred             hhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEee
Q psy14740        251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR  330 (362)
Q Consensus       251 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHr  330 (362)
                      +++..|.+||..+..|.|+++|..|.+..++|++||-|-||.|+..+...+.|++..+++++.++++|++|||++|||+|
T Consensus       465 eHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYR  544 (732)
T KOG0614|consen  465 EHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYR  544 (732)
T ss_pred             HHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceec
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        331 DLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       331 Dikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ||||+|++++.+|.+||.|||+|+++..++.
T Consensus       545 DLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  545 DLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             cCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            9999999999999999999999999877653

>KOG0595|consensus

Probab=100.00  E-value=1.7e-34  Score=257.80  Aligned_cols=156  Identities=33%  Similarity=0.567  Sum_probs=140.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+.+|.+...||.|+||.||++++.. ++..+|||.+.+..                                       
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~-~~~~VAIK~i~~~~---------------------------------------   47 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKK-SGTEVAIKCIAKKK---------------------------------------   47 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEecc-CCceEEeeeehhhc---------------------------------------
Confidence            57899999999999999999999765 46899999987642                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ........+..|+.+|+.++|||||.++++...++++|+|||||.||+|.+++++.+.+++.
T Consensus        48 ------------------l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~  109 (429)
T KOG0595|consen   48 ------------------LNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEA  109 (429)
T ss_pred             ------------------cCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHH
Confidence                              12334566889999999999999999999999999999999999999999999998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC------CcEEEEecccceecCCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS------GYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~------~~~kl~DFG~a~~~~~~~  360 (362)
                      .++.++.|++.||++||+++||||||||+|||++..      -.+||+|||+||.+.++.
T Consensus       110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~  169 (429)
T KOG0595|consen  110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS  169 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence            999999999999999999999999999999999864      458999999999887543

>KOG0615|consensus

Probab=100.00  E-value=2.7e-34  Score=256.39  Aligned_cols=160  Identities=29%  Similarity=0.423  Sum_probs=138.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|.+.+.||+|+||.|.++... .+++.||||++.+....+...                                  
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~-~tgk~vAiKIi~krk~~~~s~----------------------------------  215 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEK-KTGKQVAIKIINKRKSTGCSR----------------------------------  215 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEc-ccCcEEEeeeeehhhcccccc----------------------------------
Confidence            455778889999999999999854 679999999998864322110                                  


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .......+.+|+++|++++|||||+++++|..+++.|+||||++||+|.+.+-.++.+.+..
T Consensus       216 ------------------~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~  277 (475)
T KOG0615|consen  216 ------------------AIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDL  277 (475)
T ss_pred             ------------------cccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccch
Confidence                              11123347899999999999999999999999999999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC---CcEEEEecccceecCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~---~~~kl~DFG~a~~~~~~~  360 (362)
                      .+.+++|++.|+.|||++||+||||||+|||+..+   ..+||+|||+|+......
T Consensus       278 ~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s  333 (475)
T KOG0615|consen  278 GKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS  333 (475)
T ss_pred             hHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce
Confidence            99999999999999999999999999999999866   679999999999876543

>KOG0598|consensus

Probab=100.00  E-value=3.3e-34  Score=253.58  Aligned_cols=156  Identities=40%  Similarity=0.727  Sum_probs=144.6

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ....++|++.++||+|+||.|+.++.. ++++.||+|+++|.                                      
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~-dt~kiYAmKvl~K~--------------------------------------   61 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKK-DTGKIYAMKVLKKK--------------------------------------   61 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEc-ccCceeehhhhhhh--------------------------------------
Confidence            346789999999999999999999955 88999999999886                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        .+.......+...|..||..++||+||+++..|++++.+|+|+||+.||.|...+++++.++
T Consensus        62 ------------------~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~  123 (357)
T KOG0598|consen   62 ------------------KIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFS  123 (357)
T ss_pred             ------------------HhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcc
Confidence                              34444566778999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+++++..|+.||.|||++|||||||||+|||++..|+++|+|||+|+...
T Consensus       124 E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  124 EDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            99999999999999999999999999999999999999999999999998543

>KOG0616|consensus

Probab=100.00  E-value=4.6e-34  Score=245.02  Aligned_cols=159  Identities=47%  Similarity=0.825  Sum_probs=146.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|..+..+|.|+||+|.+++.. .++..+|+|++.+.++                                     
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k-~~g~yYAmKvL~k~~v-------------------------------------   82 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREK-HSGNYYAMKVLDKQKV-------------------------------------   82 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEc-cCCceeehhhcCHHHH-------------------------------------
Confidence            57899999999999999999999955 5688999999988743                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         +.....++..+|..+|+.+.||+++++++.+.+.+++|+||||++||.|..++++.+++++
T Consensus        83 -------------------VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e  143 (355)
T KOG0616|consen   83 -------------------VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSE  143 (355)
T ss_pred             -------------------HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCc
Confidence                               3445567789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ..+++++.||+.||+|||+++|++||+||+|||+|.+|.+||+|||+|+.+.+..|
T Consensus       144 ~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  144 PHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW  199 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence            99999999999999999999999999999999999999999999999999876543

>KOG0605|consensus

Probab=100.00  E-value=5.7e-33  Score=255.58  Aligned_cols=155  Identities=38%  Similarity=0.707  Sum_probs=143.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +.+++|.++..||+|+||.||+++ ..++|+.+|+|+++|...+..                                  
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLar-Kk~Tg~iyAmK~LkKS~M~~~----------------------------------  182 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLAR-KKDTGEIYAMKILKKSEMLKK----------------------------------  182 (550)
T ss_pred             CCcccchhheeeccccceeEEEEE-EccCCcEEeeecccHHHHHhh----------------------------------
Confidence            467899999999999999999998 668899999999999855433                                  


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                            ....++..|..+|...++|.||++|.+|++.+++||||||++||++..+|.+.+.|++
T Consensus       183 ----------------------~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e  240 (550)
T KOG0605|consen  183 ----------------------NQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTE  240 (550)
T ss_pred             ----------------------hhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCch
Confidence                                  2345678899999999999999999999999999999999999999999999899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++++.+++.|++.+|+.|+|||||||+|+|||..|++||+|||+|.-+.
T Consensus       241 ~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  241 DWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence            9999999999999999999999999999999999999999999999996553

>KOG0592|consensus

Probab=100.00  E-value=5.3e-33  Score=255.81  Aligned_cols=157  Identities=36%  Similarity=0.628  Sum_probs=143.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...+||...+.||+|+|++|+++.. .++++.||||++.|..                                      
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~-~~t~keYAiKVl~K~~--------------------------------------  110 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLARE-KATGKEYAIKVLDKRY--------------------------------------  110 (604)
T ss_pred             CChhhcchhheeccccceeEEEeee-cCCCceeeHhhhhHHH--------------------------------------
Confidence            3578999999999999999999984 4689999999998862                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        +..+.....+.+|.++|..| +||.|+++|..|+++..+|+|+||+++|+|.++|++.+.|+
T Consensus       111 ------------------Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfd  172 (604)
T KOG0592|consen  111 ------------------IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFD  172 (604)
T ss_pred             ------------------HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcch
Confidence                              23333445678899999999 89999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+++++.||+.||+|||++|||||||||+|||++.+++++|+|||.|+.+.+.
T Consensus       173 e~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  173 ETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence            9999999999999999999999999999999999999999999999999988654

>KOG0575|consensus

Probab=99.98  E-value=7.5e-32  Score=251.84  Aligned_cols=154  Identities=31%  Similarity=0.504  Sum_probs=142.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|...+.||+|+|+.+|.+... ++++.||+|++.+.                                          
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~-~tge~~A~KvVpk~------------------------------------------   54 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDL-DTGEVVAVKVVPKK------------------------------------------   54 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEc-CCCcEEEEEEeehH------------------------------------------
Confidence            56999999999999999999853 67899999999886                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                    ..........+.+|++|.+.++|||||++|++|++.+++|||+|+|+.++|..++++.++++|..+
T Consensus        55 --------------~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEa  120 (592)
T KOG0575|consen   55 --------------LLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEA  120 (592)
T ss_pred             --------------HhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHH
Confidence                          233445667799999999999999999999999999999999999999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +++++||+.||.|||+++|+|||||..|++++.+.++||+|||+|..+..+
T Consensus       121 ry~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen  121 RYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             HHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence            999999999999999999999999999999999999999999999988744

>KOG0581|consensus

Probab=99.97  E-value=5.8e-32  Score=239.43  Aligned_cols=154  Identities=33%  Similarity=0.512  Sum_probs=138.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++.+....||+|..|.||++.+. .+++.+|+|++.-                                         
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk-~t~~i~AlK~I~~-----------------------------------------  114 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHK-PTGKIYALKVILL-----------------------------------------  114 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEc-CCCeEEEEEeecc-----------------------------------------
Confidence            4567788899999999999999966 5689999999832                                         


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-eEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                       ..+...++++.+|+++++.++||+||.+|+.|..++ .++|+||||++|||.++++..+++++
T Consensus       115 -----------------~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E  177 (364)
T KOG0581|consen  115 -----------------NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPE  177 (364)
T ss_pred             -----------------cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCH
Confidence                             123456678999999999999999999999999998 59999999999999999998889999


Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..+..++.+++.||.|||+ ++||||||||+|||++..|.|||||||.++.+.++
T Consensus       178 ~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS  232 (364)
T KOG0581|consen  178 PVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS  232 (364)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence            9999999999999999995 99999999999999999999999999999887653

>KOG0611|consensus

Probab=99.97  E-value=4.7e-32  Score=241.50  Aligned_cols=153  Identities=31%  Similarity=0.581  Sum_probs=140.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+.+.||+|+||.|.++.. ...++.||||.+++.                                         
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e-~~sgR~VAiKsIrKd-----------------------------------------   89 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYE-HKSGREVAIKSIRKD-----------------------------------------   89 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhh-ccCCcEeehhhhhhh-----------------------------------------
Confidence            35788889999999999999984 356899999999886                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     ++.+....-++.+|++||..++||||+.+|.+|+..+.+.|||||..+|.|++++.+.+.+++..
T Consensus        90 ---------------kIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErE  154 (668)
T KOG0611|consen   90 ---------------KIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSERE  154 (668)
T ss_pred             ---------------hcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHH
Confidence                           45556667789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.+++||.+|+.|||.++++|||||.+|||+|.++++||+|||++-.+.
T Consensus       155 aRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  155 ARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             HHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence            99999999999999999999999999999999999999999999986543

>KOG0593|consensus

Probab=99.97  E-value=3.2e-31  Score=228.19  Aligned_cols=152  Identities=26%  Similarity=0.469  Sum_probs=131.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|+....+|+|+||.|++++ .+++|+.||||.+....                                         
T Consensus         2 ekYE~LgkvGEGSYGvV~KCr-nk~TgqIVAIKkF~Ese-----------------------------------------   39 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCR-NKDTGQIVAIKKFVESE-----------------------------------------   39 (396)
T ss_pred             cHHhhhhccccCcceEEEEec-cCCcccEEEEEeeccCC-----------------------------------------
Confidence            467788899999999999998 55889999999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                      .+....+-.++|+.+|++++|||+|.+..+|.....+++|+|||+. ++.+.+.+ ...+++..
T Consensus        40 ----------------dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p~G~~~~~  102 (396)
T KOG0593|consen   40 ----------------DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERYPNGVPSEL  102 (396)
T ss_pred             ----------------ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhccCCCCHHH
Confidence                            1122334578999999999999999999999999999999999954 55555554 45699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ++.++.|++.|+.|||++++|||||||+|||++.+|.+||||||+|+.+..|
T Consensus       103 vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p  154 (396)
T KOG0593|consen  103 VKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP  154 (396)
T ss_pred             HHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence            9999999999999999999999999999999999999999999999988743

>KOG0661|consensus

Probab=99.97  E-value=2e-31  Score=241.89  Aligned_cols=151  Identities=28%  Similarity=0.484  Sum_probs=133.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+++.+|.|+||.||+++.. .+++.||||.+++.-+                                       
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~-~~~~~VAIK~MK~Kf~---------------------------------------   48 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSK-ETGELVAIKKMKKKFY---------------------------------------   48 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeec-CCCceeeHHHHHhhhc---------------------------------------
Confidence            568999999999999999999954 6688899999876521                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeeeeccc-eEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         .-...--++|+..|++++ ||||+++++++.+++ .+|+||||+ ..+|+++++.+ +.|+
T Consensus        49 -------------------s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~M-d~NLYqLmK~R~r~fs  108 (538)
T KOG0661|consen   49 -------------------SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFM-DCNLYQLMKDRNRLFS  108 (538)
T ss_pred             -------------------cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhh-hhhHHHHHhhcCCcCC
Confidence                               112233578999999998 999999999999888 999999999 88999999865 4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|+.||+.||+|+|.+|+.|||+||+|||+..+..+||+|||+||.+.+
T Consensus       109 e~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen  109 ESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence            999999999999999999999999999999999999888999999999998853

>KOG0600|consensus

Probab=99.97  E-value=1.2e-30  Score=238.57  Aligned_cols=155  Identities=25%  Similarity=0.445  Sum_probs=133.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..+.|+.++.||+|+||.||++++. .+++.||+|.+....                                       
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~-~tgkivALKKvr~d~---------------------------------------  154 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDL-ETGKIVALKKVRFDN---------------------------------------  154 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeec-ccCcEEEEEEeeccc---------------------------------------
Confidence            5567888899999999999999954 679999999886531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcC-CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKG-NF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~l  303 (362)
                                        ..........+|+.||++++||||+++.+...+.  ..+|+|+||+ ..+|.-++...+ .|
T Consensus       155 ------------------~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM-dhDL~GLl~~p~vkf  215 (560)
T KOG0600|consen  155 ------------------EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM-DHDLSGLLSSPGVKF  215 (560)
T ss_pred             ------------------CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc-cchhhhhhcCCCccc
Confidence                              1122334467999999999999999999987665  6899999999 679998887743 69


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      ++.+++.+|.|++.||+|||++||+|||||.+|||||.+|.+||+|||+|+.+....
T Consensus       216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            999999999999999999999999999999999999999999999999999776543

>KOG0659|consensus

Probab=99.96  E-value=4.8e-30  Score=217.33  Aligned_cols=153  Identities=27%  Similarity=0.453  Sum_probs=135.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|...+.+|+|.||.||++++. .+++.||||.++.++..                                       
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~-~t~~~VAIKKIkl~~~k---------------------------------------   41 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDT-ETGKRVAIKKIKLGNAK---------------------------------------   41 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEec-CCCcEEEEEEeeccccc---------------------------------------
Confidence            46777889999999999999955 57899999999876321                                       


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~  307 (362)
                                        ........+|+..|+.++||||+.+.++|.+.+.+.+|+||+ ..+|...++... .++..+
T Consensus        42 ------------------dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm-~tdLe~vIkd~~i~l~pa~  102 (318)
T KOG0659|consen   42 ------------------DGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM-PTDLEVVIKDKNIILSPAD  102 (318)
T ss_pred             ------------------cCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec-cccHHHHhcccccccCHHH
Confidence                              122344689999999999999999999999999999999999 779999998654 589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      ++.++.+++.||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+.++.
T Consensus       103 iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen  103 IKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            99999999999999999999999999999999999999999999999988765

>KOG0583|consensus

Probab=99.96  E-value=4.6e-29  Score=232.17  Aligned_cols=156  Identities=32%  Similarity=0.563  Sum_probs=137.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .....|.+.+.||+|+||.|+.+.+. .+++.+|+|++.+....                                    
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~-~t~~~vAiKii~~~~~~------------------------------------   56 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHR-LTGEKVAIKIIDRKKVS------------------------------------   56 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeec-cCCCeEEEEEechhccc------------------------------------
Confidence            35789999999999999999999865 45789999977654110                                    


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                       ... ......+.+|+.+++.+. ||||++++.++.....+|+||||+.||+|.+++.+.++++
T Consensus        57 -----------------~~~-~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~  118 (370)
T KOG0583|consen   57 -----------------SKS-QKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLK  118 (370)
T ss_pred             -----------------ccc-cccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCC
Confidence                             001 123345668999999998 9999999999999999999999999999999999988999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~  356 (362)
                      +..++.+++|+++|++|||++||+||||||+|||++.+ +++||+|||++...
T Consensus       119 E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  119 EDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence            99999999999999999999999999999999999999 99999999999877

>KOG0585|consensus

Probab=99.96  E-value=1.3e-29  Score=230.03  Aligned_cols=166  Identities=28%  Similarity=0.466  Sum_probs=135.1

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ....+++|.++..||+|.||.|.++++.. .++.||||++.+..+.........                          
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~-~~~l~AiKil~K~~~~~~~~~~~~--------------------------  144 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEV-DGKLYAIKILPKKELRRQYGFPRQ--------------------------  144 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecC-CCcEEEEEeechhhhhhhcccccc--------------------------
Confidence            34578999999999999999999999664 588999999987633221100000                          


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                         ........+.+.+|+.+|+++.|||||+++.+..++  +.+|+|+|||..|.+...-. .+
T Consensus       145 -------------------~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~  204 (576)
T KOG0585|consen  145 -------------------PAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DK  204 (576)
T ss_pred             -------------------cccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCC-Cc
Confidence                               011112345789999999999999999999998765  67999999999888765332 34


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 N-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 ~-l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      + +++.+++.|++.++.||+|||.+|||||||||+|+|++.+|++||+|||.+...
T Consensus       205 ~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  205 PELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEF  260 (576)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeec
Confidence            4 899999999999999999999999999999999999999999999999999866

>KOG0591|consensus

Probab=99.96  E-value=7.4e-31  Score=223.89  Aligned_cols=155  Identities=28%  Similarity=0.473  Sum_probs=133.4

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+.+|++.++||.|+||+||+++.. .++..+|.|.+.-+                                       
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~-~~g~l~a~K~i~f~---------------------------------------   55 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCL-LDGKLVALKKIQFG---------------------------------------   55 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeec-cCcchhhhhhcchh---------------------------------------
Confidence            45678999999999999999999966 45888999987532                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeee-eeeccce-EEEEEeccCCcchHHHHHhc---
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYK-TFKDKKY-LYMLMESCLGGELWTILRDK---  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~~~~~~-~~lv~e~~~~~~L~~~l~~~---  300 (362)
                                        ..+....+.+..|+.+|++++||||+++|+ .+..+.. ++||||+|.+|+|.+.++..   
T Consensus        56 ------------------~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~q  117 (375)
T KOG0591|consen   56 ------------------MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQ  117 (375)
T ss_pred             ------------------hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhc
Confidence                              123445677899999999999999999999 5655554 99999999999999998752   


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHH--CC--cEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHS--RN--IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~--~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                       +.+++..+|.++.|++.||.++|+  ..  |+||||||.||+++.+|.+||+|||+++.+.+
T Consensus       118 kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s  180 (375)
T KOG0591|consen  118 KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS  180 (375)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence             359999999999999999999998  44  99999999999999999999999999998754

>KOG0610|consensus

Probab=99.96  E-value=3e-29  Score=224.45  Aligned_cols=155  Identities=36%  Similarity=0.688  Sum_probs=138.6

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      .+.++.|++++.||.|.-|.||+++..+ ++..+|+|++.+..                                     
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~-t~~~fAmKVmdK~~-------------------------------------  114 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRG-TNCLFAMKVMDKES-------------------------------------  114 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecC-CCceEEEEEecHHH-------------------------------------
Confidence            3457788999999999999999999664 56899999998762                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GN  302 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~  302 (362)
                                         ........+...|.+||+.++||.++.+|..|+.+.+.|++||||+||+|..+.+++  +.
T Consensus       115 -------------------l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~  175 (459)
T KOG0610|consen  115 -------------------LASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKR  175 (459)
T ss_pred             -------------------HhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCc
Confidence                               222334567888999999999999999999999999999999999999999999875  35


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++..+++|+..++.||+|||..|||+|||||+|||+..+|++.|+||.++...
T Consensus       176 fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  176 FSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence            999999999999999999999999999999999999999999999999998765

>KOG0694|consensus

Probab=99.96  E-value=6.9e-29  Score=234.69  Aligned_cols=155  Identities=39%  Similarity=0.711  Sum_probs=137.5

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.++.+||+|+||.|+++...+ +++.+|||+++|+++..                                  
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~-~~e~yAIK~LKK~~Il~----------------------------------  408 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKG-TNEYYAIKVLKKGDILQ----------------------------------  408 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcC-CCcEEEEEEeeccceec----------------------------------
Confidence            4578999999999999999999999664 57799999999985543                                  


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                            .......+.|..|+... +||.++.++.+|+.++++|+||||+.||++..+.+ .+.|
T Consensus       409 ----------------------~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~-~~~F  465 (694)
T KOG0694|consen  409 ----------------------RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIH-TDVF  465 (694)
T ss_pred             ----------------------cccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEe-cccc
Confidence                                  33445678899998887 59999999999999999999999999999555443 3679


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+++|+..++.||.|||++||||||||.+|||+|.+|++||+|||+|+...
T Consensus       466 ~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m  519 (694)
T KOG0694|consen  466 SEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM  519 (694)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence            999999999999999999999999999999999999999999999999999764

>KOG0663|consensus

Probab=99.96  E-value=3.6e-29  Score=218.22  Aligned_cols=155  Identities=23%  Similarity=0.344  Sum_probs=133.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.....|++|+||.||++++. .+++.||+|.++...                                       
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk-~t~eIVALKr~kmek---------------------------------------  113 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDK-KTDEIVALKRLKMEK---------------------------------------  113 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccC-CcceeEEeeeccccc---------------------------------------
Confidence            5678899999999999999999954 568899999987541                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--ccceEEEEEeccCCcchHHHHHhcC-CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--DKKYLYMLMESCLGGELWTILRDKG-NF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~-~l  303 (362)
                                        ......-.-++|+.+|.+++|||||.+-.+..  .-+.+|+||||| ..+|..++..-+ +|
T Consensus       114 ------------------ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~-EhDLksl~d~m~q~F  174 (419)
T KOG0663|consen  114 ------------------EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV-EHDLKSLMETMKQPF  174 (419)
T ss_pred             ------------------ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH-HhhHHHHHHhccCCC
Confidence                              01112223578999999999999999998764  446799999999 679999998754 79


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      ....++.++.|++.|++|||.+.|+||||||+|+|++..|.+||+|||+||.+++|.
T Consensus       175 ~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  175 LPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             chHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            999999999999999999999999999999999999999999999999999998773

>KOG0580|consensus

Probab=99.96  E-value=1.1e-29  Score=212.22  Aligned_cols=155  Identities=34%  Similarity=0.530  Sum_probs=139.7

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -.+++|.+.+.||.|.||.||++... .++..+|+|++.+.+.                                     
T Consensus        19 ~~l~dfeigr~LgkgkFG~vYlarek-ks~~IvalKVlfKsqi-------------------------------------   60 (281)
T KOG0580|consen   19 WTLDDFEIGRPLGKGKFGNVYLAREK-KSLFIVALKVLFKSQI-------------------------------------   60 (281)
T ss_pred             cchhhccccccccCCccccEeEeeec-cCCcEEEEeeeeHHHH-------------------------------------
Confidence            36889999999999999999999854 5678899999988742                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHH--hcCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l  303 (362)
                                         ......+++.+|++|.+.++||||.++|++|-+...+|+++||.++|++...+.  ...++
T Consensus        61 -------------------~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f  121 (281)
T KOG0580|consen   61 -------------------LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRF  121 (281)
T ss_pred             -------------------HHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccc
Confidence                               223345678999999999999999999999999999999999999999999998  45679


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|+|.+++|||||||+|+|++.++.+|++|||.+..-.
T Consensus       122 ~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  122 DEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             cccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            999999999999999999999999999999999999999999999999987653

>KOG0597|consensus

Probab=99.96  E-value=4e-29  Score=230.96  Aligned_cols=150  Identities=31%  Similarity=0.517  Sum_probs=136.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.+|+|+||.||+++++ .+.+.||+|.+.|..                                         
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK-~t~~~vAik~i~K~g-----------------------------------------   39 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRK-YTIQVVAIKFIDKSG-----------------------------------------   39 (808)
T ss_pred             cchhHHHHhcCCccceeeecccc-cceeEEEEEEehhcC-----------------------------------------
Confidence            57888899999999999999854 568899999987742                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ......+.+.+|++|++.++||||+.++++|+...++|+|+||+.| +|..++...+.++++.+
T Consensus        40 ----------------r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v  102 (808)
T KOG0597|consen   40 ----------------RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQV  102 (808)
T ss_pred             ----------------CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHH
Confidence                            1234456789999999999999999999999999999999999955 99999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.+++.||.|||+++|+|||+||.|||+...|.+|+||||+|+-..
T Consensus       103 ~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen  103 RAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS  151 (808)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc
Confidence            9999999999999999999999999999999999999999999998664

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=4.5e-28  Score=227.67  Aligned_cols=152  Identities=39%  Similarity=0.680  Sum_probs=135.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.+|+|++.+...                                        
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKK-DTGHVYAMKILRKADM----------------------------------------   39 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4588999999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+..|+.++..++||||+++++.+.+...+|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~  103 (363)
T cd05628          40 ----------------LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEET  103 (363)
T ss_pred             ----------------HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHH
Confidence                            1122335678899999999999999999999999999999999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+|+.+.
T Consensus       104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628         104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            9999999999999999999999999999999999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=5.9e-28  Score=224.69  Aligned_cols=158  Identities=43%  Similarity=0.792  Sum_probs=139.0

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.+.+.||+|+||.||++.+.......+|+|.+.+...                                    
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~------------------------------------   69 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI------------------------------------   69 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh------------------------------------
Confidence            34678999999999999999999986655556899998865311                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                          ........+.+|+.+++.++||||+++++++.+++.+|+||||+++++|.+++.+.+.++
T Consensus        70 --------------------~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~  129 (340)
T PTZ00426         70 --------------------IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFP  129 (340)
T ss_pred             --------------------hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence                                112233457889999999999999999999999999999999999999999998888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+..
T Consensus       130 ~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        130 NDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            999999999999999999999999999999999999999999999999987643

>KOG0198|consensus

Probab=99.95  E-value=3.5e-28  Score=218.19  Aligned_cols=150  Identities=32%  Similarity=0.504  Sum_probs=131.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|...+.||+|+||.||++.+.. +++..|+|.+...+                                        
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~-~g~~~AvK~v~~~~----------------------------------------   54 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKK-TGELMAVKSVELED----------------------------------------   54 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecC-CCcceeeeeeeccc----------------------------------------
Confidence            5668889999999999999999654 47889999875321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--eEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                         ....+.+.+|+.+|.+++|||||++++......  .++++|||+++|+|.+++.+.+ .++
T Consensus        55 -------------------~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~  115 (313)
T KOG0198|consen   55 -------------------SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLP  115 (313)
T ss_pred             -------------------chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCC
Confidence                               001456889999999999999999999754443  6999999999999999999876 799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~  357 (362)
                      ++.++.+.+|++.||.|||++||+||||||+|||++. ++.+||+|||+++...
T Consensus       116 E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen  116 EPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            9999999999999999999999999999999999999 7999999999998776

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=6.6e-28  Score=223.56  Aligned_cols=156  Identities=46%  Similarity=0.794  Sum_probs=138.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus        15 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-------------------------------------   56 (329)
T PTZ00263         15 WKLSDFEMGETLGTGSFGRVRIAKHK-GTGEYYAIKCLKKREI-------------------------------------   56 (329)
T ss_pred             CCchheEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHH-------------------------------------
Confidence            46789999999999999999999865 4578899999865311                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+++.+|++|||+++++|.+.+.+.+.+++
T Consensus        57 -------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  117 (329)
T PTZ00263         57 -------------------LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN  117 (329)
T ss_pred             -------------------hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCH
Confidence                               1122345678899999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       118 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263        118 DVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999999999999999999999999999999999999999999987654

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.4e-28  Score=227.84  Aligned_cols=151  Identities=36%  Similarity=0.705  Sum_probs=134.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+++.||+|+||.||++... .+++.+|+|.+.+...                                        
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKK-DTGKIYAMKTLLKSEM----------------------------------------   39 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4578899998865311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++.+++++|+||||+++++|.+++...+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  103 (377)
T cd05629          40 ----------------FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVT  103 (377)
T ss_pred             ----------------HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence                            1122345678899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+
T Consensus       104 ~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629         104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            999999999999999999999999999999999999999999999744

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=9.2e-28  Score=225.67  Aligned_cols=152  Identities=41%  Similarity=0.748  Sum_probs=135.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||.|+||.||++.+. .+++.+|+|++.+...                                        
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~----------------------------------------   39 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKK-DTGHIYAMKKLRKSEM----------------------------------------   39 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEEC-CCCCEEEEEEEEHHHh----------------------------------------
Confidence            47999999999999999999965 4578899999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++.+++.+|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~  103 (364)
T cd05599          40 ----------------LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEET  103 (364)
T ss_pred             ----------------hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHH
Confidence                            1112334577899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       104 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599         104 RFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            9999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0588|consensus

Probab=99.95  E-value=2.8e-28  Score=229.28  Aligned_cols=154  Identities=31%  Similarity=0.481  Sum_probs=140.7

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..++-|++.+.||.|+-|.|.++++. .+|+.+|||++.+.                                       
T Consensus         9 ~tiGpwkLgkTLG~Gstg~vrlakh~-~TGqlaaiKii~k~---------------------------------------   48 (786)
T KOG0588|consen    9 NTIGPWKLGKTLGKGSTGCVRLAKHA-ETGQLAAIKIIPKR---------------------------------------   48 (786)
T ss_pred             ccccceeccccccCCCCceehhhhcc-cccceeEEEeeccc---------------------------------------
Confidence            35788999999999999999999954 67999999999775                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                       ..........+.+|+.+|+.+.|||++++|++|++..++|+|.||++||.|++++-+.+++++
T Consensus        49 -----------------~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e  111 (786)
T KOG0588|consen   49 -----------------SELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPE  111 (786)
T ss_pred             -----------------cccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCC
Confidence                             123344556789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+..+++||+.|+.|||..+|+|||+||+|+|++..+++||+|||+|..-
T Consensus       112 ~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen  112 REAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE  162 (786)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc
Confidence            999999999999999999999999999999999999999999999999643

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.95  E-value=1.2e-27  Score=226.28  Aligned_cols=151  Identities=36%  Similarity=0.653  Sum_probs=134.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+++.||+|+||.||++.+. .+++.+|+|.+.+...                                        
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~-~~~~~~aiK~i~~~~~----------------------------------------   39 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKV-DTHALYAMKTLRKKDV----------------------------------------   39 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHh----------------------------------------
Confidence            36889999999999999999855 4688999999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~  103 (381)
T cd05626          40 ----------------LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLA  103 (381)
T ss_pred             ----------------hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence                            1222345688999999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+
T Consensus       104 ~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626         104 RFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            999999999999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=1.3e-27  Score=225.69  Aligned_cols=151  Identities=36%  Similarity=0.690  Sum_probs=134.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.+|+|.+.+...                                        
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~-~~~~~~avK~~~~~~~----------------------------------------   39 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKV-DTNALYAMKTLRKADV----------------------------------------   39 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEEC-CCCCEEEEEEEcHHHH----------------------------------------
Confidence            47999999999999999999865 4588999999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++.+.+++.+|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~  103 (376)
T cd05598          40 ----------------LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLA  103 (376)
T ss_pred             ----------------HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence                            1112235577899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+|..+
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598         104 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            999999999999999999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0594|consensus

Probab=99.95  E-value=3.1e-28  Score=215.35  Aligned_cols=150  Identities=26%  Similarity=0.414  Sum_probs=128.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|..++.+|+|+||.||+++.. .+++.||+|.++-..                                         
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~-~~g~~VALKkirl~~-----------------------------------------   48 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSK-RTGKFVALKKIRLEF-----------------------------------------   48 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEe-cCCCEEEEEEEeccc-----------------------------------------
Confidence            34555667999999999999955 567899999886431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcc-eeeeeeeeeccc------eEEEEEeccCCcchHHHHHhcC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF-IVKLYKTFKDKK------YLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                      .+........+|+.+++.++|+| |+.+++++....      .+++|+||+ ..+|.+++....
T Consensus        49 ----------------~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~  111 (323)
T KOG0594|consen   49 ----------------EEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLP  111 (323)
T ss_pred             ----------------cccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEee-cccHHHHHHhcc
Confidence                            00123455689999999999999 999999987766      899999999 789999998754


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ----NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ----~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                          .++...++.+++|++.||+|||+++|+||||||+|||++++|.+||+|||+|+-+.
T Consensus       112 ~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen  112 KKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFS  171 (323)
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence                47889999999999999999999999999999999999999999999999998664

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=1.6e-27  Score=225.44  Aligned_cols=151  Identities=36%  Similarity=0.668  Sum_probs=134.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+++.||+|+||.||++... .+++.+|+|.+.+...                                        
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~-~~~~~~aiK~i~~~~~----------------------------------------   39 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKV-DTKALYAMKTLRKKDV----------------------------------------   39 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEEC-CCCCEEEEEEEeHHHh----------------------------------------
Confidence            36889999999999999999855 4578899999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++.+.+++.+|+||||+++|+|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~  103 (382)
T cd05625          40 ----------------LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLA  103 (382)
T ss_pred             ----------------hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence                            1122345678899999999999999999999999999999999999999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625         104 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            999999999999999999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.3e-27  Score=217.77  Aligned_cols=153  Identities=48%  Similarity=0.816  Sum_probs=134.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... .+++.+|+|.+.....                                        
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDR-ISEHYYALKVMAIPEV----------------------------------------   39 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEc-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4578899998864311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++.+...+|+||||+++++|.+++...+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  103 (291)
T cd05612          40 ----------------IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTG  103 (291)
T ss_pred             ----------------hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence                            1112335578899999999999999999999999999999999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       104 ~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612         104 LFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999999999999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0608|consensus

Probab=99.95  E-value=1.5e-27  Score=222.93  Aligned_cols=150  Identities=35%  Similarity=0.683  Sum_probs=136.5

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      -|..++.||-|+||+|-++... |+..-||+|.+.|.|++.++.                                    
T Consensus       630 mFvkik~iGvGAFGeV~Lv~Kv-DT~~lYAmKTLrKaDVl~rnQ------------------------------------  672 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKV-DTRALYAMKTLRKADVLMRNQ------------------------------------  672 (1034)
T ss_pred             ceEEEeeecccccceeEEEeec-chhhHHHHhhhHHHHHHhhhh------------------------------------
Confidence            3667788999999999999854 678889999999998765432                                    


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                          ..++..|..||...+++-||++|.+|++.+.+|+||||++||++..++.+.+-|+++.++
T Consensus       673 --------------------vaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LAR  732 (1034)
T KOG0608|consen  673 --------------------VAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLAR  732 (1034)
T ss_pred             --------------------hhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHH
Confidence                                244677999999999999999999999999999999999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++..+..|+++.|..|+|||||||+|||||.+|++||+|||+|.-+
T Consensus       733 FYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  733 FYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             HHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccc
Confidence            99999999999999999999999999999999999999999999644

>KOG0192|consensus

Probab=99.95  E-value=1.5e-27  Score=220.32  Aligned_cols=150  Identities=25%  Similarity=0.416  Sum_probs=130.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .++.+...+|.|+||+||.+.+.+.  ..+|+|.+...+.-                                       
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~--~~vavK~~~~~~~~---------------------------------------   79 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGT--DVVAVKIISDPDFD---------------------------------------   79 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCc--eeEEEEEecchhcC---------------------------------------
Confidence            3444555699999999999997753  23999998765321                                       


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-eEEEEEeccCCcchHHHHHh--cCCCCH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRD--KGNFDD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--~~~l~~  305 (362)
                                        ....+.+.+|+.+|..++||||+++++++..+. .+.+||||+++|+|.+++..  ...++.
T Consensus        80 ------------------~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~  141 (362)
T KOG0192|consen   80 ------------------DESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPL  141 (362)
T ss_pred             ------------------hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCH
Confidence                              111577999999999999999999999998887 79999999999999999987  567999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC-cEeecCCCCcEEecCCC-cEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSG-YVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~-iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~  357 (362)
                      ..+..++.+|+.|+.|||+++ ||||||||+|||++.++ ++||+|||+++...
T Consensus       142 ~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  142 KVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV  195 (362)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence            999999999999999999999 99999999999999998 99999999998654

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=4e-27  Score=221.06  Aligned_cols=152  Identities=39%  Similarity=0.695  Sum_probs=135.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++... .+++.+|+|.+.+.+.                                        
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKK-DTGHIYAMKILRKADM----------------------------------------   39 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4578899999865321                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+..|+.++..++||||+++++.+.+.+.+|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~  103 (360)
T cd05627          40 ----------------LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEAT  103 (360)
T ss_pred             ----------------hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHH
Confidence                            1122345678899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       104 ~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627         104 QFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            9999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG1113|consensus

Probab=99.95  E-value=1.2e-27  Score=209.61  Aligned_cols=211  Identities=24%  Similarity=0.380  Sum_probs=167.9

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      +++..-||.+| +++++.+++++|..+++++|+.|++|||.|++||||.+|++.|++.      ...+..++||..|||+
T Consensus       123 a~r~~~LF~~L-d~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~------~~~v~~~~~g~sFGEl  195 (368)
T KOG1113|consen  123 AFRKNLLFANL-DDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVN------GTYVTTYSPGGSFGEL  195 (368)
T ss_pred             HHHhccccccC-CHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEEC------CeEEeeeCCCCchhhh
Confidence            46778899999 9999999999999999999999999999999999999999999965      2569999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhhccccCcEEEEEec-------
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLG-------  158 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg-------  158 (362)
                      ||+++.||.||+.|+  +++.+|.+++..|++++..+....++++.++.....+.+.+..  .++-++...++       
T Consensus       196 ALmyn~PRaATv~a~--t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k--~er~kv~dal~~k~y~~G  271 (368)
T KOG1113|consen  196 ALMYNPPRAATVVAK--SLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEK--LERAKVADALGTKSYKDG  271 (368)
T ss_pred             HhhhCCCcccceeec--cccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHH--HHHHhhhcccceeeccCC
Confidence            999999999999999  5599999999999999999999889998888766665554432  11112222222       


Q ss_pred             -----ccceecEEEEEecCC-----CCCceeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        159 -----VGGFGRVELVQIAGD-----PSRSFALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       159 -----~G~~g~v~~~~~~~~-----~~~~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                           +|.-|..+...-.|.     ...-+.+ .+.++++|+     .+.+|.|++.|.++  ++|.++|++.|++++|+
T Consensus       272 ~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~v~v-kl~~~dyfge~al~~~~pr~Atv~a~~~--~kc~~~dk~~ferllgp  348 (368)
T KOG1113|consen  272 ERVIVQGDQGEHFYIIEEGEVDVLKKRDGVEV-KLKKGDYFGELALLKNLPRAATVVAKGR--LKCAKLDKPRFERLLGP  348 (368)
T ss_pred             ceEEeccCCcceEEEecccccchhhccCCeEE-EechhhhcchHHHHhhchhhceeeccCC--ceeeeeChHHHHHHhhH
Confidence                 222333333322211     0112555 567788888     46899999999876  89999999999999999


Q ss_pred             hHHhhhh
Q psy14740        224 LDEIRTK  230 (362)
Q Consensus       224 ~~~~~~~  230 (362)
                      -.++.++
T Consensus       349 c~dilkr  355 (368)
T KOG1113|consen  349 CQDILKR  355 (368)
T ss_pred             HHHHHHh
Confidence            8877664

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4e-27  Score=218.70  Aligned_cols=151  Identities=40%  Similarity=0.725  Sum_probs=134.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.+|+|++.+...                                        
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~----------------------------------------   39 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKK-DTGEIVALKRMKKSLL----------------------------------------   39 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4578899999865411                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+..|+.++..++||||+++++++...+..|+||||+++++|.+++...+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~  103 (333)
T cd05600          40 ----------------FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHA  103 (333)
T ss_pred             ----------------hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence                            1112335678899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       104 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~  151 (333)
T cd05600         104 RFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGI  151 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence            999999999999999999999999999999999999999999999765

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=7.2e-27  Score=219.84  Aligned_cols=153  Identities=37%  Similarity=0.653  Sum_probs=134.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.+...                                      
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~~aiK~~~~~~~--------------------------------------   81 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHK-SSQKVYAMKLLSKFEM--------------------------------------   81 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHh--------------------------------------
Confidence            4678999999999999999999865 4578899999865311                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ........+.+|+.+++.++||||+++++++.+++.+|+||||+++++|.+++.. ..+++.
T Consensus        82 ------------------~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~  142 (370)
T cd05621          82 ------------------IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YDVPEK  142 (370)
T ss_pred             ------------------hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHH
Confidence                              1112234567899999999999999999999999999999999999999999875 468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       143 ~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         143 WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence            999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0197|consensus

Probab=99.95  E-value=1.1e-27  Score=221.58  Aligned_cols=150  Identities=31%  Similarity=0.490  Sum_probs=132.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .+++++.||+|.||.|+++.+.+  ...+|+|.++.+.                                          
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~--~~~vavk~ik~~~------------------------------------------  242 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNG--STKVAVKTIKEGS------------------------------------------  242 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcC--CCcccceEEeccc------------------------------------------
Confidence            34566789999999999999875  4468999886642                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh--cCCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~  307 (362)
                                        ...+.+.+|+.+|++++|+|||++++++..++.+||||||++.|+|.++++.  ...+...+
T Consensus       243 ------------------m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~  304 (468)
T KOG0197|consen  243 ------------------MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQ  304 (468)
T ss_pred             ------------------cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHH
Confidence                              2235577999999999999999999999988899999999999999999987  34589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ...++.||++|++||+++++|||||...|||++.+..+||+|||+||.+.++.|
T Consensus       305 Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  305 LLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             HHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence            999999999999999999999999999999999999999999999997666665

>KOG0194|consensus

Probab=99.95  E-value=2e-26  Score=216.05  Aligned_cols=257  Identities=22%  Similarity=0.319  Sum_probs=178.7

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCe---EEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDT---FFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~---~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      .++..++|-++++.++.+.++..       .|+++++.-++.+.   .+.|++    |...                   
T Consensus        45 ~~~~~~~yHG~l~red~~~lL~~-------~GDfLvR~s~~~~~~~~~~~vlS----v~~~-------------------   94 (474)
T KOG0194|consen   45 DLRELPYYHGLLPREDAEKLLKN-------DGDFLVRASEPKEGEKREFVVLS----VKWS-------------------   94 (474)
T ss_pred             HhhcCccccccccHhHHHHHhCC-------CCceEEEeecccCCcceeEEEEE----EEee-------------------
Confidence            35667999999899999888876       89999988777542   111221    1110                   


Q ss_pred             ecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhh----hHHhhhhhhhhhccccCcEEEEEec
Q psy14740         83 GEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET----SERRRLNEEFRSLRLSDLRVITTLG  158 (362)
Q Consensus        83 GE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lg  158 (362)
                           .....+..-+...  .+ ..+......|..+..-..........-.    -....+..+--++.-++..+.+.||
T Consensus        95 -----~~~~~~h~vi~~~--~~-~~~~~~~~~F~si~~li~~~~~~~~~~~~~~~~L~~PI~r~~Wel~H~~v~l~kkLG  166 (474)
T KOG0194|consen   95 -----VFKKIKHYVIKRN--GN-LFFFEGLRKFPTISELVNYYKFSKLEITGKNFFLKRPIPRQKWELSHSDIELGKKLG  166 (474)
T ss_pred             -----cCCceeEEEEEEc--CC-eeEEeccccCCcHHHHHHHHHhcccceeccceeecccccccccEEeccCccccceee
Confidence                 0001112233333  22 3344444444433322222211111000    0112222222233445666778999


Q ss_pred             ccceecEEEEEecCCCC---CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        159 VGGFGRVELVQIAGDPS---RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       159 ~G~~g~v~~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      +|.||+||.+......+   ..||+|.....                                                 
T Consensus       167 eGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-------------------------------------------------  197 (474)
T KOG0194|consen  167 EGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-------------------------------------------------  197 (474)
T ss_pred             cccccEEEEEEEEecCCceeeeeEEEeeccc-------------------------------------------------
Confidence            99999999998765433   23788876532                                                 


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC-CCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~q  314 (362)
                             ..........+++|+++|++++||||+++|++......+++|||+|+||+|.+++++++. ++..+...++.+
T Consensus       198 -------~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~  270 (474)
T KOG0194|consen  198 -------SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYD  270 (474)
T ss_pred             -------ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence                   112234567799999999999999999999999999999999999999999999998764 999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+.||+|||++++|||||-.+|+|++.++.+||+|||+++.-
T Consensus       271 AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  271 AARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             HHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence            999999999999999999999999999999999999998753

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=8e-27  Score=215.75  Aligned_cols=144  Identities=35%  Similarity=0.631  Sum_probs=127.6

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (323)
T cd05571           2 LLGKGTFGKVILVREK-ATGKYYAMKILKKEVI-----------------------------------------------   33 (323)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4588999999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV  315 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql  315 (362)
                               ........+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+.+++..++.++.|+
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi  104 (323)
T cd05571          34 ---------IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI  104 (323)
T ss_pred             ---------hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                     11223345678999999999999999999999999999999999999999999888889999999999999


Q ss_pred             HHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       316 ~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       105 ~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571         105 VSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            99999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.5e-26  Score=214.65  Aligned_cols=152  Identities=29%  Similarity=0.616  Sum_probs=133.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... .+++.+|+|++.+...                                        
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMK-NTGQVYAMKILNKWEM----------------------------------------   39 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999855 4578899999865311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                      ........+.+|..++..++||||+++++++.+++++|+||||+++++|.+++.+ ...+++..
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  103 (331)
T cd05597          40 ----------------LKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (331)
T ss_pred             ----------------hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHH
Confidence                            1112334577899999999999999999999999999999999999999999976 35699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++..+.
T Consensus       104 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597         104 ARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            99999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=2e-26  Score=216.91  Aligned_cols=154  Identities=37%  Similarity=0.663  Sum_probs=134.4

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~-~~~~~~aiK~i~~~~~-------------------------------------   81 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEM-------------------------------------   81 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEEC-CCCcEEEEEEEEHHHh-------------------------------------
Confidence            35689999999999999999999855 5678899999865311                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++.+..++.+|+||||+++++|.+++.. ..+++
T Consensus        82 -------------------~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~  141 (371)
T cd05622          82 -------------------IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPE  141 (371)
T ss_pred             -------------------hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCH
Confidence                               1112234467899999999999999999999999999999999999999999875 45899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       142 ~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         142 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence            9999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=1.8e-26  Score=214.09  Aligned_cols=152  Identities=31%  Similarity=0.648  Sum_probs=132.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... .+++.+|+|.+.+...                                        
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMK-HTERIYAMKILNKWEM----------------------------------------   39 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHH----------------------------------------
Confidence            47999999999999999999855 4578899998865311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                      ........+..|..++..++||||+++++++.++++.|+||||+++++|.+++.+ ...+++..
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~  103 (331)
T cd05624          40 ----------------LKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (331)
T ss_pred             ----------------HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHH
Confidence                            1112234577889999999999999999999999999999999999999999986 45789999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       104 ~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~  153 (331)
T cd05624         104 ARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN  153 (331)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence            99999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1e-26  Score=217.25  Aligned_cols=154  Identities=40%  Similarity=0.711  Sum_probs=136.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                        
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDK-DTGQVYAMKVLRKSDM----------------------------------------   39 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEEC-CCCCEEEEEEEEHHHH----------------------------------------
Confidence            47899999999999999999865 4588999999865421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+..|+.++..++||||+++++++.+++++|+||||+++++|.+++.+.+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  103 (350)
T cd05573          40 ----------------IKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETA  103 (350)
T ss_pred             ----------------hhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence                            1112335578899999999999999999999999999999999999999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+...
T Consensus       104 ~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573         104 RFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            999999999999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0658|consensus

Probab=99.94  E-value=2.9e-27  Score=209.25  Aligned_cols=146  Identities=28%  Similarity=0.461  Sum_probs=123.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      -.|+-.+.+|.|+||.||.+.... +++++|||...+...                                        
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e-~~~~vAIKKv~~d~r----------------------------------------   62 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRE-TEEEVAIKKVLQDKR----------------------------------------   62 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcC-CCceeEEEEecCCCC----------------------------------------
Confidence            346778899999999999999664 488999998765421                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHh----
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRD----  299 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~----  299 (362)
                                             ---+|..+|+.++|||||++..+|...     -+..+||||+ ..+|.+.++.    
T Consensus        63 -----------------------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~  118 (364)
T KOG0658|consen   63 -----------------------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRA  118 (364)
T ss_pred             -----------------------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhc
Confidence                                   124699999999999999998887532     2567999999 6789998874    


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecCCC
Q psy14740        300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       300 ~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~~  359 (362)
                      +..++...++.++.|++.||.|||+.||+||||||.|+|+|.+ |.+||||||.|+.+..+
T Consensus       119 ~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~  179 (364)
T KOG0658|consen  119 NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG  179 (364)
T ss_pred             CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence            4679999999999999999999999999999999999999975 99999999999988654

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=1.7e-26  Score=217.40  Aligned_cols=154  Identities=39%  Similarity=0.671  Sum_probs=134.4

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++... .+++.+|+|.+.+...                                     
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~-------------------------------------   81 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHK-SSKQVYAMKLLSKFEM-------------------------------------   81 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-------------------------------------
Confidence            35688999999999999999999855 4678899999865311                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+..|+.+++.++||||+++++++.+++.+|+||||+++++|.+++.. ..+++
T Consensus        82 -------------------~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~  141 (370)
T cd05596          82 -------------------IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPE  141 (370)
T ss_pred             -------------------hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCH
Confidence                               1112234467899999999999999999999999999999999999999998865 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       142 ~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         142 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=2.3e-26  Score=213.25  Aligned_cols=153  Identities=35%  Similarity=0.589  Sum_probs=134.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+...||+|+||.||++... .+++.+|+|.+.+...                                        
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREK-ATGDIYAMKVMKKSVL----------------------------------------   39 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEEHHHh----------------------------------------
Confidence            46899999999999999999855 4688999999865411                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~  307 (362)
                                      ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.+. ..+++..
T Consensus        40 ----------------~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~  103 (330)
T cd05601          40 ----------------LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM  103 (330)
T ss_pred             ----------------hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHH
Confidence                            11223355778999999999999999999999999999999999999999999876 5799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.+..
T Consensus       104 ~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601         104 AQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             HHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            999999999999999999999999999999999999999999999987643

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0582|consensus

Probab=99.94  E-value=2.4e-26  Score=207.52  Aligned_cols=153  Identities=26%  Similarity=0.389  Sum_probs=137.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||.|.-+.||+++.. ..++.||||++.-.+                                       
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~-p~~e~VAIK~inLEk---------------------------------------   63 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCI-PTNEVVAIKIINLEK---------------------------------------   63 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeec-ccCCEEEEEEeehhh---------------------------------------
Confidence            5688999999999999999999865 557899999986542                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                         .+.....+.+|+..|+.++||||++++.+|..+..+|+||.|+.+||+.++++..  ..++
T Consensus        64 -------------------c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~  124 (516)
T KOG0582|consen   64 -------------------CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLE  124 (516)
T ss_pred             -------------------hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHcccccc
Confidence                               1223567899999999999999999999999999999999999999999999874  3499


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      |..+..++++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+..+..
T Consensus       125 E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~  178 (516)
T KOG0582|consen  125 EASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD  178 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence            999999999999999999999999999999999999999999999998866543

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=1.4e-26  Score=214.20  Aligned_cols=144  Identities=35%  Similarity=0.648  Sum_probs=127.1

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|.+.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~-----------------------------------------------   33 (323)
T cd05595           2 LLGKGTFGKVILVREK-ATGRYYAMKILRKEVI-----------------------------------------------   33 (323)
T ss_pred             eeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4578899999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV  315 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql  315 (362)
                               ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|..++...+.+++..++.++.|+
T Consensus        34 ---------~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi  104 (323)
T cd05595          34 ---------IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI  104 (323)
T ss_pred             ---------hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                     11223345678999999999999999999999999999999999999999999887789999999999999


Q ss_pred             HHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       316 ~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595         105 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            99999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=2e-26  Score=213.54  Aligned_cols=144  Identities=38%  Similarity=0.654  Sum_probs=127.4

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~-----------------------------------------------   33 (328)
T cd05593           2 LLGKGTFGKVILVREK-ASGKYYAMKILKKEVI-----------------------------------------------   33 (328)
T ss_pred             eeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999854 5588999999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV  315 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql  315 (362)
                               ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|...+...+.+++..+..++.|+
T Consensus        34 ---------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi  104 (328)
T cd05593          34 ---------IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEI  104 (328)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHH
Confidence                     11223356778999999999999999999999999999999999999999999887789999999999999


Q ss_pred             HHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       316 ~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593         105 VSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             HHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            99999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0660|consensus

Probab=99.94  E-value=5.4e-27  Score=207.15  Aligned_cols=150  Identities=24%  Similarity=0.451  Sum_probs=131.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .|..++.+|.|+||.|..+.+. .+++.||||.+...                                           
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~-~t~~~VAIKKi~~~-------------------------------------------   58 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDK-RTGEKVAIKKILNP-------------------------------------------   58 (359)
T ss_pred             eecccccccCcceeeEEEEEEc-CCCCEeehhhhhhh-------------------------------------------
Confidence            4455789999999999999855 56789999987531                                           


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-----cceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-----KKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                    .......++..+|+.+|+.++|+||+.+++++..     -..+|+|+|++ +.+|.++++.+..++
T Consensus        59 --------------F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~  123 (359)
T KOG0660|consen   59 --------------FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLT  123 (359)
T ss_pred             --------------hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCcccc
Confidence                          2234455778999999999999999999998865     35699999999 899999999987899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+++++.|++.||.|+|+.+|+|||+||.|++++.++.+||+|||+||...+
T Consensus       124 d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen  124 DDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             HHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            999999999999999999999999999999999999999999999999998753

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=211.66  Aligned_cols=143  Identities=41%  Similarity=0.733  Sum_probs=126.7

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||++.+. .+++.+|+|.+.+..                                                 
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~aiK~i~~~~-------------------------------------------------   30 (312)
T cd05585           1 IGKGSFGKVMQVRKR-DTQRIYALKTIRKAH-------------------------------------------------   30 (312)
T ss_pred             CCcCCCeEEEEEEEC-CCCCEEEEEEEEHHH-------------------------------------------------
Confidence            699999999999865 557889999986531                                                 


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV  316 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~  316 (362)
                             .........+..|+.+++.++||||+++++++..++..|+||||+++++|.+++...+.+++..+..++.|++
T Consensus        31 -------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~  103 (312)
T cd05585          31 -------IVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELL  103 (312)
T ss_pred             -------hhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                   1112234557789999999999999999999999999999999999999999998878899999999999999


Q ss_pred             HHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       317 ~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       104 ~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~  143 (312)
T cd05585         104 CALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLN  143 (312)
T ss_pred             HHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence            9999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=3.9e-26  Score=211.96  Aligned_cols=152  Identities=31%  Similarity=0.643  Sum_probs=132.3

Q ss_pred             CcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +|++.+.||+|+||.||++....  .+++.+|+|++.+...                                       
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---------------------------------------   41 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL---------------------------------------   41 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH---------------------------------------
Confidence            58899999999999999998643  4578899999865311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                      .........+..|+.++..+ +||||+++++++..++.+|++|||+++++|.+++...+.+++.
T Consensus        42 ----------------~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~  105 (332)
T cd05614          42 ----------------VQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSED  105 (332)
T ss_pred             ----------------hhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence                            01112334577899999999 5999999999999999999999999999999999887789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus       106 ~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614         106 EVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            99999999999999999999999999999999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=4.6e-26  Score=210.78  Aligned_cols=150  Identities=32%  Similarity=0.600  Sum_probs=130.4

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++++.||+|+||.||++... .+++.+|+|++.+...                                         
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~-----------------------------------------   38 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVI-----------------------------------------   38 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------
Confidence            5889999999999999999855 4578899999865411                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     ........+..|..++..++| ++|+++++++...+.+|+||||+++++|.+++.....+++..+
T Consensus        39 ---------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~  103 (324)
T cd05587          39 ---------------IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHA  103 (324)
T ss_pred             ---------------hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence                           112233457788999999876 5688999999999999999999999999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            999999999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=5.5e-26  Score=210.36  Aligned_cols=144  Identities=38%  Similarity=0.665  Sum_probs=126.4

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~a~K~~~~~~~-----------------------------------------------   33 (325)
T cd05594           2 LLGKGTFGKVILVKEK-ATGRYYAMKILKKEVI-----------------------------------------------   33 (325)
T ss_pred             eeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4688999999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV  315 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql  315 (362)
                               ........+..|+.+++.++||||+++++++..++.+|+||||+++++|..++...+.+++..+..++.|+
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi  104 (325)
T cd05594          34 ---------VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI  104 (325)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                     11122345678999999999999999999999999999999999999999999887789999999999999


Q ss_pred             HHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        316 VEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       316 ~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.||.|||+ +||+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~  146 (325)
T cd05594         105 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  146 (325)
T ss_pred             HHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence            999999997 79999999999999999999999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0662|consensus

Probab=99.94  E-value=5.5e-27  Score=188.14  Aligned_cols=151  Identities=26%  Similarity=0.452  Sum_probs=131.3

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.-.+.||+|+||+|+++++ .++++.+|+|.++-.+                                          
T Consensus         3 ~ydkmekigegtygtvfkarn-~~t~eivalkrvrldd------------------------------------------   39 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARN-RETHEIVALKRVRLDD------------------------------------------   39 (292)
T ss_pred             chHHHHhhcCCcceeeEeccc-CCccceEEEEEEeccC------------------------------------------
Confidence            344557799999999999984 4678999999876431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~  308 (362)
                                     .+....+...+|+-+++.++|.||++++++.-.+..+.+|+||| ..+|..+..+ ++.++.+.+
T Consensus        40 ---------------ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-dqdlkkyfdslng~~d~~~~  103 (292)
T KOG0662|consen   40 ---------------DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIV  103 (292)
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHH
Confidence                           12334456789999999999999999999999999999999999 7789988875 567999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +.++.|++.||.|+|+++++|||+||.|+||+.+|.+||+|||+|+-++-|
T Consensus       104 rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen  104 RSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             HHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence            999999999999999999999999999999999999999999999977543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=7.4e-26  Score=205.90  Aligned_cols=151  Identities=25%  Similarity=0.373  Sum_probs=130.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.+.+.||.|+||.||++... .+++.+|+|.+....                                       
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~---------------------------------------   42 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSK-LTENLVALKEIRLEH---------------------------------------   42 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEEC-CCCCEEEEEEecccc---------------------------------------
Confidence            4688999999999999999999855 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                         .......+.+|+.+++.++||||+++++++..++..|+||||++ ++|.+++...+ .+++
T Consensus        43 -------------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~  102 (288)
T cd07871          43 -------------------EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSM  102 (288)
T ss_pred             -------------------cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCCCCCH
Confidence                               01112346789999999999999999999999999999999996 58998887544 4789


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       103 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871         103 HNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            9999999999999999999999999999999999999999999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0586|consensus

Probab=99.94  E-value=3.4e-26  Score=214.20  Aligned_cols=156  Identities=33%  Similarity=0.512  Sum_probs=141.8

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ......|.++..||+|.|+.|.++.+. .++..||||.+.+...                                    
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~-~t~~~VaiK~idkt~l------------------------------------   94 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHI-LTGTEVAIKIIDKTQL------------------------------------   94 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEec-CCCceEEEEEehhccc------------------------------------
Confidence            346888999999999999999999966 5688999999987532                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                           +....+.+.+|+++|+.++||||++++.+...+..+|+||||+.+|.+.+++.+++.+.
T Consensus        95 ---------------------n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~  153 (596)
T KOG0586|consen   95 ---------------------NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMK  153 (596)
T ss_pred             ---------------------ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccch
Confidence                                 22334558899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|+.+|++|||+++|+|||||++|||++.+.++||+|||++..+..
T Consensus       154 e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  154 EKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             hhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc
Confidence            999999999999999999999999999999999999999999999999988753

>KOG0612|consensus

Probab=99.94  E-value=2.8e-27  Score=233.71  Aligned_cols=154  Identities=36%  Similarity=0.630  Sum_probs=139.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-++|.++++||.|+||.|.+++.. .+++.||+|+++|-....+                                   
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k-~t~~VYAMK~lnK~eMlKr-----------------------------------  116 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHK-STEKVYAMKILNKWEMLKR-----------------------------------  116 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEee-ccccchhHHHhhHHHHhhc-----------------------------------
Confidence            5688999999999999999999965 5688999999988543221                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                           ....-|..|..+|...+.+=|++++..|+++.++|+||||++||+|..++.+..++|+.
T Consensus       117 ---------------------~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~  175 (1317)
T KOG0612|consen  117 ---------------------AETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPED  175 (1317)
T ss_pred             ---------------------hhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHH
Confidence                                 12245788999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++++|+..|+.||.-+|+.|+|||||||+|||+|..|++||+|||.|-.+.
T Consensus       176 ~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  176 WARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             HHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            999999999999999999999999999999999999999999999997765

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=4.6e-26  Score=210.65  Aligned_cols=147  Identities=39%  Similarity=0.666  Sum_probs=128.1

Q ss_pred             EEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        155 TTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      +.||+|+||.||++....  ..++.+|+|.+.+....                                           
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~-------------------------------------------   38 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV-------------------------------------------   38 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH-------------------------------------------
Confidence            579999999999998642  45788999998654210                                           


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                                  ........+..|+.+++.++||||+++++++..++.+|++|||+++++|.+++.+.+.+++..+..++
T Consensus        39 ------------~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  106 (323)
T cd05584          39 ------------RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYL  106 (323)
T ss_pred             ------------hhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHH
Confidence                        11122345678999999999999999999999999999999999999999999888889999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       107 ~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584         107 SEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            99999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=1e-25  Score=204.69  Aligned_cols=150  Identities=30%  Similarity=0.559  Sum_probs=129.6

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |+..+.||+|+||.||++... .+++.+|+|.+.+...                                          
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~------------------------------------------   38 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRI------------------------------------------   38 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEe-cCCceEEEEEeeHhhh------------------------------------------
Confidence            788899999999999999865 4578899998865411                                          


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~  308 (362)
                                    ........+.+|+.+++.++||||+++++++.+.+.++++|||+++++|.+.+...  ..+++..+
T Consensus        39 --------------~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~  104 (285)
T cd05631          39 --------------KKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRA  104 (285)
T ss_pred             --------------hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHH
Confidence                          11112345678999999999999999999999999999999999999998877543  35899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631         105 IFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            9999999999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.94  E-value=9e-26  Score=209.54  Aligned_cols=151  Identities=30%  Similarity=0.625  Sum_probs=131.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... ..++.+|+|.+.+...                                        
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEM----------------------------------------   39 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEEC-CCCCEEEEEEEeHHHH----------------------------------------
Confidence            47899999999999999999865 4577899998865311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                      ........+..|+.++..++||+|+++++.+.+++.+|+||||+++|+|.+++.+ ...+++..
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~  103 (332)
T cd05623          40 ----------------LKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (332)
T ss_pred             ----------------HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHH
Confidence                            1111234467889999999999999999999999999999999999999999976 35689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+
T Consensus       104 ~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~  152 (332)
T cd05623         104 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL  152 (332)
T ss_pred             HHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheec
Confidence            9999999999999999999999999999999999999999999998765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0032|consensus

Probab=99.94  E-value=6.6e-26  Score=211.06  Aligned_cols=154  Identities=32%  Similarity=0.525  Sum_probs=135.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-..|.+.+.||.|.||.||.+... .+++.+|+|.+.+...                                      
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~-~tg~~~A~K~i~k~~~--------------------------------------   73 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREK-STGKEVACKVIPKRKL--------------------------------------   73 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEec-CCCceeEEEEeehhhc--------------------------------------
Confidence            3456889999999999999999955 5588999999987522                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        ........+.+|+.+|+.+. ||||+.++++|++.+.+|+|||++.||.|.+.+... .+++
T Consensus        74 ------------------~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE  134 (382)
T KOG0032|consen   74 ------------------RGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSE  134 (382)
T ss_pred             ------------------cccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCH
Confidence                              11124466889999999998 999999999999999999999999999999988775 4999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC----CcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.++.|||+.||+||||||+|+|+...    +.+|++|||+|.....
T Consensus       135 ~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  135 RDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            9999999999999999999999999999999999643    4799999999998866

>KOG0589|consensus

Probab=99.94  E-value=7.2e-27  Score=215.23  Aligned_cols=156  Identities=26%  Similarity=0.484  Sum_probs=137.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|..++++|.|+||.++++++..+ ...+++|.+.-..                                       
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~-~~~~vlK~I~l~~---------------------------------------   41 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSD-DKLYVLKKINLEK---------------------------------------   41 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccC-CceEEEEEEeccc---------------------------------------
Confidence            367899999999999999999997765 5578999876432                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccce-EEEEEeccCCcchHHHHHhcC--CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY-LYMLMESCLGGELWTILRDKG--NF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~--~l  303 (362)
                                        .....+....+|..+++++.||||+.+.+.|..++. ++|||+||+||++.+.+++.+  .+
T Consensus        42 ------------------~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f  103 (426)
T KOG0589|consen   42 ------------------LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLF  103 (426)
T ss_pred             ------------------cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccc
Confidence                              122233467899999999999999999999998887 999999999999999998754  59


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      +++.+..++.|++.|+.|||+++|+|||||+.||++..++.|+|+|||+|+.+.++.
T Consensus       104 ~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen  104 PEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            999999999999999999999999999999999999999999999999999887764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=7.4e-26  Score=210.56  Aligned_cols=151  Identities=30%  Similarity=0.435  Sum_probs=126.4

Q ss_pred             ccCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|++.+.||+|+||.||++.+.    ...++.+|+|.+....                                    
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------------------------------   49 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA------------------------------------   49 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc------------------------------------
Confidence            357999999999999999999753    2345679999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc-ceEEEEEeccCCcchHHHHHhc-
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK-KYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                            .......+.+|+.++..+ +||||+++++++... +.+|++|||+++|+|.+++... 
T Consensus        50 ----------------------~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~  107 (338)
T cd05102          50 ----------------------TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKR  107 (338)
T ss_pred             ----------------------chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcc
Confidence                                  112234588999999999 899999999987654 4689999999999999988642 


Q ss_pred             -------------------------------------------------------------CCCCHHHHHHHHHHHHHHH
Q psy14740        301 -------------------------------------------------------------GNFDDATTRFYTACVVEAF  319 (362)
Q Consensus       301 -------------------------------------------------------------~~l~~~~~~~~~~ql~~al  319 (362)
                                                                                   .+++...+..++.|++.||
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  187 (338)
T cd05102         108 EFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGM  187 (338)
T ss_pred             hhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHH
Confidence                                                                         2367788899999999999


Q ss_pred             HHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       320 ~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus       188 ~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~  224 (338)
T cd05102         188 EFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI  224 (338)
T ss_pred             HHHHHCCEECCCCccceEEEcCCCcEEEeeccccccc
Confidence            9999999999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=1.4e-25  Score=207.52  Aligned_cols=150  Identities=33%  Similarity=0.604  Sum_probs=130.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+...||+|+||.||++.+. .+++.+|+|.+.+...                                         
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------   38 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVV-----------------------------------------   38 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------
Confidence            5889999999999999999865 4578899999865411                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     ...........|..++..+ .||+|+++++++...+.+|+||||+++++|.+.+...+.+++..+
T Consensus        39 ---------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~  103 (323)
T cd05616          39 ---------------IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHA  103 (323)
T ss_pred             ---------------hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence                           1112234456777887776 589999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            999999999999999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=8.5e-26  Score=209.43  Aligned_cols=143  Identities=34%  Similarity=0.632  Sum_probs=126.2

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~aiK~i~~~~~-----------------------------------------------   33 (329)
T cd05588           2 VIGRGSYAKVLLVELK-KTRRIYAMKVIKKELV-----------------------------------------------   33 (329)
T ss_pred             eEeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4578899999875411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|..++..+ +||||+++++++.+.+.+|+||||+++++|.+++.+.+.+++..++.++.|
T Consensus        34 ---------~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~q  104 (329)
T cd05588          34 ---------NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAE  104 (329)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence                     1122334577899999888 799999999999999999999999999999999888788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++.
T Consensus       105 i~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588         105 ISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence            99999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0033|consensus

Probab=99.93  E-value=8.5e-28  Score=201.51  Aligned_cols=153  Identities=29%  Similarity=0.469  Sum_probs=133.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+.+.||+|.|+.|+++. .+.+++.+|+|+++-.                                          
T Consensus        11 d~y~l~e~igkG~FSvVrRc~-~~~tg~~fa~kiin~~------------------------------------------   47 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTK------------------------------------------   47 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHH-hccchHHHHHHHhhhh------------------------------------------
Confidence            567778889999999999998 5578999999988543                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     .......+.+.+|+.|.+.++||||+++++.+...++.|+|+|++.|++|..-+-...-+++..+
T Consensus        48 ---------------k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~a  112 (355)
T KOG0033|consen   48 ---------------KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA  112 (355)
T ss_pred             ---------------hhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHH
Confidence                           12233667789999999999999999999999999999999999999999876665556899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~~  359 (362)
                      -.+++||++||.|+|.++|+|||+||+|+++.+   ..-+||+|||+|..+.++
T Consensus       113 SH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g  166 (355)
T KOG0033|consen  113 SHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG  166 (355)
T ss_pred             HHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence            999999999999999999999999999999964   345999999999988754

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.93  E-value=1.5e-25  Score=205.33  Aligned_cols=149  Identities=25%  Similarity=0.409  Sum_probs=128.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++... .+++.+|+|.+....                                        
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~----------------------------------------   42 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSK-VNGKLVALKVIRLQE----------------------------------------   42 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEEC-CCCCEEEEEEecccc----------------------------------------
Confidence            578999999999999999999855 457889999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                        .......+.+|+.+++.++||||+++++++.+.+..|+||||+ .++|.+++... +.+++.
T Consensus        43 ------------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~  103 (303)
T cd07869          43 ------------------EEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYV-HTDLCQYMDKHPGGLHPE  103 (303)
T ss_pred             ------------------ccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECC-CcCHHHHHHhCCCCCCHH
Confidence                              0111234678999999999999999999999999999999999 56787777653 468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       104 ~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869         104 NVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            99999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=9e-26  Score=208.08  Aligned_cols=144  Identities=37%  Similarity=0.684  Sum_probs=123.7

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|.+.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~-----------------------------------------------   33 (316)
T cd05592           2 VLGKGSFGKVMLAELK-GTNEFFAIKALKKDVV-----------------------------------------------   33 (316)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999865 4578899999865411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ...........|..++.. .+||||+++++++..++.+|+||||+++++|..++...+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~q  104 (316)
T cd05592          34 ---------LEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAE  104 (316)
T ss_pred             ---------hhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                     111223344566666665 4899999999999999999999999999999999988778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.+||+|||+|+..
T Consensus       105 i~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~  146 (316)
T cd05592         105 IICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN  146 (316)
T ss_pred             HHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence            999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=9.1e-26  Score=208.24  Aligned_cols=146  Identities=41%  Similarity=0.681  Sum_probs=127.6

Q ss_pred             EEecccceecEEEEEec--CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        155 TTLGVGGFGRVELVQIA--GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      +.||+|+||.||++...  ..+++.+|+|++.+...                                            
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--------------------------------------------   37 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--------------------------------------------   37 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--------------------------------------------
Confidence            56899999999998853  34678899998865310                                            


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                                   .......+..|+.+++.++||||+++++++..++.+|+||||+++++|.+++.+...+++..++.++
T Consensus        38 -------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  104 (318)
T cd05582          38 -------------KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL  104 (318)
T ss_pred             -------------hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence                         1112334678999999999999999999999999999999999999999999887789999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       105 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  149 (318)
T cd05582         105 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  149 (318)
T ss_pred             HHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence            999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0599|consensus

Probab=99.93  E-value=6.9e-27  Score=198.92  Aligned_cols=160  Identities=26%  Similarity=0.420  Sum_probs=135.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +..|...+.+|.|..+.|..+.+. .+++.+|+|++.-..              ..                        
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k-~t~~e~a~kii~~~a--------------t~------------------------   56 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHK-ETGKEFAVKIIDVTA--------------TT------------------------   56 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhc-ccccceeEEEEEecc--------------cc------------------------
Confidence            566777888999999999988855 567778888874321              00                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                 ..  ..........-.+|++||+++ .||+|+++.++|+.+.++++|+|.++.|.|.+++.+.-.+++.
T Consensus        57 -----------~~--~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK  123 (411)
T KOG0599|consen   57 -----------ES--GETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEK  123 (411)
T ss_pred             -----------cC--CccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHH
Confidence                       00  011233445567899999997 8999999999999999999999999999999999987789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..+.+|+|++.|++|||.++|+||||||+|||++++.+++|+|||+|+++..+
T Consensus       124 ~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G  176 (411)
T KOG0599|consen  124 ETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG  176 (411)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence            99999999999999999999999999999999999999999999999998654

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=1.5e-25  Score=207.26  Aligned_cols=150  Identities=33%  Similarity=0.605  Sum_probs=129.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.....||+|+||.||++... .+++.+|+|++.+...                                         
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~-----------------------------------------   38 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVV-----------------------------------------   38 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------
Confidence            4778899999999999999855 4578899999865311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     ........+..|..++..+. ||+|+++++++...+.+|+||||+++++|.+++...+.+++..+
T Consensus        39 ---------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~  103 (323)
T cd05615          39 ---------------IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQA  103 (323)
T ss_pred             ---------------hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence                           11122345677888888875 57888999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       104 ~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615         104 VFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence            999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=2e-25  Score=204.60  Aligned_cols=152  Identities=23%  Similarity=0.358  Sum_probs=126.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC---------------CCCceeeeeeccccccccccccccceeeeCCCCceEEEe
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD---------------PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVI  212 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~---------------~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l  212 (362)
                      -++|.+.+.||+|+||.||++.+...               .+..+|+|.+...                          
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~--------------------------   57 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD--------------------------   57 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC--------------------------
Confidence            35789999999999999999975321               2235677765432                          


Q ss_pred             ehhhHHhhccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcc
Q psy14740        213 DQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGE  292 (362)
Q Consensus       213 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  292 (362)
                                                      ........+.+|+.++..++||||+++++++.+.+..+++|||+++++
T Consensus        58 --------------------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  105 (304)
T cd05096          58 --------------------------------ANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGD  105 (304)
T ss_pred             --------------------------------CCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCc
Confidence                                            112234568899999999999999999999999999999999999999


Q ss_pred             hHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        293 LWTILRDKG-------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       293 L~~~l~~~~-------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      |.+++....                   .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       106 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~  185 (304)
T cd05096         106 LNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMS  185 (304)
T ss_pred             HHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccc
Confidence            999886531                   2566788999999999999999999999999999999999999999999999


Q ss_pred             eecC
Q psy14740        354 KKLI  357 (362)
Q Consensus       354 ~~~~  357 (362)
                      +.+.
T Consensus       186 ~~~~  189 (304)
T cd05096         186 RNLY  189 (304)
T ss_pred             eecc
Confidence            8653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=1.5e-25  Score=207.82  Aligned_cols=144  Identities=34%  Similarity=0.629  Sum_probs=125.8

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (329)
T cd05618           2 VIGRGSYAKVLLVRLK-KTERIYAMKVVKKELV-----------------------------------------------   33 (329)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEhhHh-----------------------------------------------
Confidence            5899999999999855 4578899999875411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|+.++..+ +||||+++++++..++.+|+||||+++++|..++...+.+++..++.++.|
T Consensus        34 ---------~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~q  104 (329)
T cd05618          34 ---------NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE  104 (329)
T ss_pred             ---------cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence                     1122334567888888776 899999999999999999999999999999999888788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       105 i~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618         105 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             HHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=1.4e-25  Score=207.31  Aligned_cols=144  Identities=36%  Similarity=0.628  Sum_probs=125.4

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (321)
T cd05591           2 VLGKGSFGKVMLAELK-GTDEVYAIKVLKKDVI-----------------------------------------------   33 (321)
T ss_pred             ccccCCCeEEEEEEEC-CCCCEEEEEEEeHHHh-----------------------------------------------
Confidence            5899999999999855 4578899999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|..++..+ +||||+++++++..++.+|+||||+++++|...+...+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~q  104 (321)
T cd05591          34 ---------LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAE  104 (321)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                     1112234466788888865 899999999999999999999999999999999988788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       105 i~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591         105 VTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence            999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=1.5e-25  Score=207.00  Aligned_cols=144  Identities=38%  Similarity=0.678  Sum_probs=125.3

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|.+.+...                                               
T Consensus         2 ~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (320)
T cd05590           2 VLGKGSFGKVMLARLK-ESGRLYAVKVLKKDVI-----------------------------------------------   33 (320)
T ss_pred             eeeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHH-----------------------------------------------
Confidence            5899999999999854 4578899999865411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|..++..+ +||||+++++++...+.+|+||||+++++|.+++.+.+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~q  104 (320)
T cd05590          34 ---------LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE  104 (320)
T ss_pred             ---------hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHH
Confidence                     1112234566788888776 799999999999999999999999999999999988788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       105 l~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590         105 ITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0578|consensus

Probab=99.93  E-value=4.4e-26  Score=211.68  Aligned_cols=151  Identities=25%  Similarity=0.434  Sum_probs=134.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|.....+|+|.-|.||.+...+ +++.||+|.+...                                         
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~-~~~~VaiK~m~l~-----------------------------------------  309 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKIS-TKQEVAIKRMDLR-----------------------------------------  309 (550)
T ss_pred             hhhhcchhhhccccccceeeeeecc-CCceEEEEEEEec-----------------------------------------
Confidence            4567888899999999999999664 5778999998653                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .+...+-+.+|+.+|+..+|+|||.+++.|...+.+|+||||++||+|.+++.. ..+++.+
T Consensus       310 ------------------~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~-~~~~E~q  370 (550)
T KOG0578|consen  310 ------------------KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK-TRMTEGQ  370 (550)
T ss_pred             ------------------cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc-ccccHHH
Confidence                              122334578999999999999999999999999999999999999999998876 4599999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+.+.++.||+|||.+||+|||||.+|||++.+|.+||+|||+|.++...
T Consensus       371 IA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~  422 (550)
T KOG0578|consen  371 IAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE  422 (550)
T ss_pred             HHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence            9999999999999999999999999999999999999999999999988654

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=2.4e-25  Score=210.84  Aligned_cols=143  Identities=24%  Similarity=0.320  Sum_probs=128.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. .+++.+|+|....                                         
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~-~~~~~vaiK~~~~-----------------------------------------  127 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDN-KTCEHVVIKAGQR-----------------------------------------  127 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEEC-CCCCEEEEechhh-----------------------------------------
Confidence            4568999999999999999999854 5678899985421                                         


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                              ..+.+|+.+++.++||||+++++++..+...+++||++ +++|.+++.....+++.
T Consensus       128 ------------------------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~l~~~  182 (391)
T PHA03212        128 ------------------------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY-KTDLYCYLAAKRNIAIC  182 (391)
T ss_pred             ------------------------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-CCCHHHHHHhcCCCCHH
Confidence                                    23568999999999999999999999999999999999 67899988877789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+|+..
T Consensus       183 ~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        183 DILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            99999999999999999999999999999999999999999999999643

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=1.6e-25  Score=207.01  Aligned_cols=144  Identities=38%  Similarity=0.708  Sum_probs=123.2

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~-----------------------------------------------   33 (323)
T cd05575           2 VIGKGSFGKVLLAKHK-ADGKFYAVKVLQKKAI-----------------------------------------------   33 (323)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHH-----------------------------------------------
Confidence            5899999999999955 4588999999865421                                               


Q ss_pred             hhhccccccccchhhhhhHHHHH-HHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKE-IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|.. +++.++||||+++++.+...+.+|+||||+++++|..++.+.+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~q  104 (323)
T cd05575          34 ---------LKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAE  104 (323)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence                     01112233455554 45778999999999999999999999999999999999988788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       105 i~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575         105 IASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0667|consensus

Probab=99.93  E-value=1.5e-25  Score=211.72  Aligned_cols=150  Identities=27%  Similarity=0.372  Sum_probs=131.5

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||+|+||.|-++.+ ..+++.||||++++.                                           
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d-~~T~e~VAIKIiKN~-------------------------------------------  222 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYD-HKTGEIVAIKIIKNK-------------------------------------------  222 (586)
T ss_pred             EEEEEEEecccccceeEEEEe-cCCCcEEEEEeeccC-------------------------------------------
Confidence            678999999999999999984 467999999999764                                           


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcC-C-----cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-C-----DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                       .....+...|+.+|..++ |     -|+|+++++|...+++|||+|.+ ..+|+++++.++  
T Consensus       223 -----------------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~  284 (586)
T KOG0667|consen  223 -----------------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFR  284 (586)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCC
Confidence                             233456678999999986 3     38999999999999999999999 889999999864  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CCcEEEEecccceecCCCCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~~~kl~DFG~a~~~~~~~~  361 (362)
                      .++...++.++.||+.||.+||+.+|||+||||+|||+..  ...+|++|||.|+.....-|
T Consensus       285 Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy  346 (586)
T KOG0667|consen  285 GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY  346 (586)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence            5899999999999999999999999999999999999975  45799999999987665443

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=1.6e-25  Score=206.83  Aligned_cols=144  Identities=39%  Similarity=0.685  Sum_probs=123.0

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (321)
T cd05603           2 VIGKGSFGKVLLAKRK-SDGSFYAVKVLQKKTI-----------------------------------------------   33 (321)
T ss_pred             eeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHH-----------------------------------------------
Confidence            6899999999999855 4578899999865411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHH-HHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKE-IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|.. +++.++||||+++++++.+.+..|+||||+++++|...+.....+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q  104 (321)
T cd05603          34 ---------LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAE  104 (321)
T ss_pred             ---------HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence                     11112233445544 57788999999999999999999999999999999998887778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       105 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603         105 VASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.93  E-value=1.8e-25  Score=206.87  Aligned_cols=144  Identities=38%  Similarity=0.699  Sum_probs=123.2

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|++.+...                                               
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (325)
T cd05604           2 VIGKGSFGKVLLAKRK-LDGKCYAVKVLQKKIV-----------------------------------------------   33 (325)
T ss_pred             ceeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4588999999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHHH-HHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKE-IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|.. +++.++||||+++++++...+.+|+||||+++++|...+.+.+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q  104 (325)
T cd05604          34 ---------LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAE  104 (325)
T ss_pred             ---------hhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence                     11122234455554 46778999999999999999999999999999999999988788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       105 i~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604         105 IASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=2.5e-25  Score=202.05  Aligned_cols=151  Identities=26%  Similarity=0.449  Sum_probs=130.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                         
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~avK~~~~~~-----------------------------------------   38 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHK-ETKEIVAIKKFKDSE-----------------------------------------   38 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEEC-CCCcEEEEEEEeccc-----------------------------------------
Confidence            47899999999999999999865 457889999885431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++...+.+|+||||++++.+..+......+++..+
T Consensus        39 ----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~  102 (287)
T cd07848          39 ----------------ENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKV  102 (287)
T ss_pred             ----------------ccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHH
Confidence                            0112234577899999999999999999999999999999999988777665555557999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.+.
T Consensus       103 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~  151 (287)
T cd07848         103 RSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLS  151 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence            9999999999999999999999999999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=2.3e-25  Score=206.14  Aligned_cols=148  Identities=36%  Similarity=0.697  Sum_probs=125.7

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.||+|+||.||++.+. .+++.+|+|.+.+....                                         
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~-----------------------------------------   38 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYK-KTGELYAIKALKKGDII-----------------------------------------   38 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHhh-----------------------------------------
Confidence            678999999999999999855 45788999998764211                                         


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHH---hhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIM---GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     .......+.+|+.++   +.++||||+++++++...+.+|+||||+++++|...+.. +.+++..
T Consensus        39 ---------------~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~  102 (324)
T cd05589          39 ---------------ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPR  102 (324)
T ss_pred             ---------------hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHH
Confidence                           111223455666554   566899999999999999999999999999999988764 5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       103 ~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589         103 AVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            9999999999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0690|consensus

Probab=99.93  E-value=6.8e-27  Score=203.38  Aligned_cols=153  Identities=37%  Similarity=0.655  Sum_probs=138.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|...++||+|+||.|-+++ .+.+++.+|+|++++.-+                                      
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~r-EKat~k~YAiKIlkKevi--------------------------------------  206 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCR-EKATGKLYAIKILKKEVI--------------------------------------  206 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEe-ecccCceeehhhhhhhhe--------------------------------------
Confidence            56788889999999999999998 667899999999988622                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        .......+-+.|-.+|+..+||.+..+-.+|+..+.+++||||..||.|.-.+.+.+.+++.
T Consensus       207 ------------------iakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~  268 (516)
T KOG0690|consen  207 ------------------IAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSED  268 (516)
T ss_pred             ------------------eehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccch
Confidence                              22233355678999999999999999999999999999999999999999989888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++++...|++||.|||+++|++||+|.+|+|++.+|++||+|||+|+.-
T Consensus       269 RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  269 RTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             hhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            99999999999999999999999999999999999999999999999854

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.93  E-value=3.1e-25  Score=223.05  Aligned_cols=153  Identities=32%  Similarity=0.622  Sum_probs=136.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+++.||.|+||.||++.+. ..++.||+|++.+...                                       
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~-~~~~~vAiKvi~~~~~---------------------------------------   42 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKK-NNSKLYAVKVVKKADM---------------------------------------   42 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEehhhc---------------------------------------
Confidence            678999999999999999999865 4578999999865421                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+..|+.+++.++||||++++.++...+++|+||||+++++|.+++...+.+++..
T Consensus        43 -----------------~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~  105 (669)
T cd05610          43 -----------------INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEM  105 (669)
T ss_pred             -----------------cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHH
Confidence                             112234567889999999999999999999999999999999999999999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.++.|++.||.|||.++|+||||||+|||++.++.++|+|||+++...
T Consensus       106 ~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610         106 AVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            99999999999999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=3.1e-25  Score=206.18  Aligned_cols=148  Identities=21%  Similarity=0.408  Sum_probs=127.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.||+|+||.||++.+. .+++.+|+|.+....                                          
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~------------------------------------------   37 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDT-HTGEKVAIKKINDVF------------------------------------------   37 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEEC-CCCCEEEEEEechhh------------------------------------------
Confidence            5889999999999999999855 457889999875320                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                     .......++.+|+.+++.++||||+++++++...     ..+|+||||+ +++|.+++.....++
T Consensus        38 ---------------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~  101 (338)
T cd07859          38 ---------------EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLT  101 (338)
T ss_pred             ---------------ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecC-CCCHHHHHHhcccCC
Confidence                           0111234578899999999999999999987533     3589999999 679999998877899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       102 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859         102 PEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999999999999999999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=6.3e-25  Score=203.77  Aligned_cols=152  Identities=28%  Similarity=0.470  Sum_probs=134.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++++.||+|+||.||++.+. .++..+|+|.+...                                        
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~----------------------------------------   41 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHK-PSGLIMARKLIHLE----------------------------------------   41 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEEC-CCCcEEEEEEeecc----------------------------------------
Confidence            4578999999999999999999855 45778999987532                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ........+.+|+++++.++||||+++++++...+.+++||||+++++|.+++.....+++.
T Consensus        42 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  103 (331)
T cd06649          42 ------------------IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE  103 (331)
T ss_pred             ------------------cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHH
Confidence                              01123456889999999999999999999999999999999999999999999887789999


Q ss_pred             HHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649         104 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            9999999999999999986 69999999999999999999999999997653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=2.5e-25  Score=205.96  Aligned_cols=144  Identities=37%  Similarity=0.684  Sum_probs=122.1

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|++.+...                                               
T Consensus         2 ~lg~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (325)
T cd05602           2 VIGKGSFGKVLLARHK-AEEKFYAVKVLQKKAI-----------------------------------------------   33 (325)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHH-----------------------------------------------
Confidence            5899999999999865 4577899999865311                                               


Q ss_pred             hhhccccccccchhhhhhHHHH-HHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEK-EIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|. .+++.++||||+++++++...+.+|+||||+++++|.+++...+.+++..++.++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~q  104 (325)
T cd05602          34 ---------LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE  104 (325)
T ss_pred             ---------HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHH
Confidence                     0011122334444 456778999999999999999999999999999999999988778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       105 i~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602         105 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=3.6e-25  Score=205.07  Aligned_cols=144  Identities=31%  Similarity=0.605  Sum_probs=126.5

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... ..++.+|+|++.+..                                                
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~------------------------------------------------   32 (327)
T cd05617           2 VIGRGSYAKVLLVRLK-KNDQIYAMKVVKKEL------------------------------------------------   32 (327)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHH------------------------------------------------
Confidence            6899999999999855 457889999986541                                                


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                              .........+..|+.++..+ +||||+++++++...+.+|+||||+++++|..++...+.+++..++.++.|
T Consensus        33 --------~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~q  104 (327)
T cd05617          33 --------VHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAE  104 (327)
T ss_pred             --------hhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                    11122335577899998887 699999999999999999999999999999999988788999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       105 i~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~  146 (327)
T cd05617         105 ICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEG  146 (327)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence            999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=6.4e-25  Score=213.34  Aligned_cols=151  Identities=27%  Similarity=0.357  Sum_probs=130.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|.+.+.+|.|+||.||++....+.++.+++|.+...                                         
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-----------------------------------------  104 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-----------------------------------------  104 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-----------------------------------------
Confidence            445999999999999999999866554677888865321                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l  303 (362)
                                        .......+.+|+.+++.++||||+++++.+..++.+|+||||+++++|.+++..    ..++
T Consensus       105 ------------------~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l  166 (478)
T PTZ00267        105 ------------------DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPF  166 (478)
T ss_pred             ------------------CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCC
Confidence                              112234567899999999999999999999999999999999999999987753    3468


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++.+.
T Consensus       167 ~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~  220 (478)
T PTZ00267        167 QEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS  220 (478)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence            999999999999999999999999999999999999999999999999998764

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=3.5e-25  Score=204.17  Aligned_cols=143  Identities=38%  Similarity=0.661  Sum_probs=123.7

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~-----------------------------------------------   33 (316)
T cd05620           2 VLGKGSFGKVLLAELK-GKGEYFAVKALKKDVV-----------------------------------------------   33 (316)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            6899999999999865 4678899999865411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ...........|..++.. .+||||+++++++.+.+++|+||||+++++|..++.....+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~q  104 (316)
T cd05620          34 ---------LIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAE  104 (316)
T ss_pred             ---------hhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                     011122345667777765 4899999999999999999999999999999999988778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++.
T Consensus       105 i~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05620         105 IVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence            99999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.3e-25  Score=198.66  Aligned_cols=151  Identities=30%  Similarity=0.568  Sum_probs=130.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .|++.+.||+|+||.||++... .+++.+|+|.+.+...                                         
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~-----------------------------------------   38 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRI-----------------------------------------   38 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEc-CCCceEEEEEEehhhh-----------------------------------------
Confidence            4788999999999999999854 4578899998865311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                     ........+.+|+.+++.++||||+++++.+..++.+|++|||+++++|.+.+...  ..+++..
T Consensus        39 ---------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  103 (285)
T cd05605          39 ---------------KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEER  103 (285)
T ss_pred             ---------------hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHH
Confidence                           11112345678999999999999999999999999999999999999999887643  3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605         104 AVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             HHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            99999999999999999999999999999999999999999999998653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.9e-25  Score=205.09  Aligned_cols=143  Identities=37%  Similarity=0.675  Sum_probs=121.8

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||++.+. .+++.+|+|++.+...                                                
T Consensus         1 lG~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~------------------------------------------------   31 (330)
T cd05586           1 IGKGTFGQVYQVRKK-DTRRIYAMKVLSKKEI------------------------------------------------   31 (330)
T ss_pred             CCCCCceEEEEEEEC-CCCCEEEEEEEeHHHH------------------------------------------------
Confidence            699999999999854 5688999999865311                                                


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                              ...........|..++...   +||||++++.++...+.+|+||||+++++|..++.+.+.+++..++.++.
T Consensus        32 --------~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  103 (330)
T cd05586          32 --------VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIA  103 (330)
T ss_pred             --------hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHH
Confidence                    0111223345566666654   79999999999999999999999999999999998878899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |++.||.|||++||+||||||+|||++.++.++|+|||+++..
T Consensus       104 qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586         104 ELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             HHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            9999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG4250|consensus

Probab=99.93  E-value=1.1e-25  Score=213.78  Aligned_cols=152  Identities=30%  Similarity=0.411  Sum_probs=129.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .-|...+.||+|+||.||..++. .+|+.+|+|.+++..                                         
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnk-etG~~vAvK~~~~~~-----------------------------------------   50 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNK-ETGRLVAVKTFNKES-----------------------------------------   50 (732)
T ss_pred             cceeehhhhcCCccceeeeeccc-ccccchhHHhhhhhc-----------------------------------------
Confidence            45677889999999999999854 679999999987641                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc--
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                       ..+..+.+.+|+++|++++|||||+++++-+..      +...++||||.||||...+.+.  
T Consensus        51 -----------------~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN  113 (732)
T KOG4250|consen   51 -----------------SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPEN  113 (732)
T ss_pred             -----------------ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCccc
Confidence                             233456688999999999999999999986543      3578999999999999999864  


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CC--cEEEEecccceecCCC
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SG--YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~--~~kl~DFG~a~~~~~~  359 (362)
                       ..+++..+..++..+..||.|||++||+||||||.||++-.  +|  ..||+|||.||.+.++
T Consensus       114 ~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~  177 (732)
T KOG4250|consen  114 AYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN  177 (732)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence             35999999999999999999999999999999999999953  34  3799999999988654

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=4.8e-25  Score=199.73  Aligned_cols=144  Identities=36%  Similarity=0.629  Sum_probs=123.6

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||++.+. .+++.+|+|.+.+...                                                
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~------------------------------------------------   31 (280)
T cd05608           1 LGKGGFGEVSACQMR-ATGKLYACKKLNKKRL------------------------------------------------   31 (280)
T ss_pred             CCCCCceeEEEEEEc-cCCcEEEEEeeeHHHH------------------------------------------------
Confidence            699999999999855 4578899998865310                                                


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCCCHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFDDATTRFYT  312 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~  312 (362)
                              ........+..|+.+++.++||||+++++++..++.+|++|||+++++|...+..    +..+++..+..++
T Consensus        32 --------~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~  103 (280)
T cd05608          32 --------KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYT  103 (280)
T ss_pred             --------hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHH
Confidence                    1112234567899999999999999999999999999999999999999887743    3458999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  148 (280)
T cd05608         104 AQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELK  148 (280)
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence            999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.93  E-value=9.3e-25  Score=198.79  Aligned_cols=153  Identities=48%  Similarity=0.887  Sum_probs=135.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||.+.+.. .++.+++|.+.+...                                        
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~aiK~~~~~~~----------------------------------------   39 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG-SGKYYALKILSKAKI----------------------------------------   39 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC-CCCEEEEEEEEHHHh----------------------------------------
Confidence            478999999999999999998654 578899998765311                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+++++.++||||+++++++..++.+|++|||+++++|.+++...+.+++..+
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~  103 (290)
T cd05580          40 ----------------VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVA  103 (290)
T ss_pred             ----------------hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHH
Confidence                            1122345678899999999999999999999999999999999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||+++.+..
T Consensus       104 ~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580         104 RFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            99999999999999999999999999999999999999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.92  E-value=5.6e-25  Score=202.78  Aligned_cols=144  Identities=36%  Similarity=0.631  Sum_probs=123.8

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~-----------------------------------------------   33 (316)
T cd05619           2 MLGKGSFGKVFLAELK-GTNQFFAIKALKKDVV-----------------------------------------------   33 (316)
T ss_pred             eeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-----------------------------------------------
Confidence            5899999999999855 4578899999865411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ...........|..++.. .+||||+++++++.+.+.+|+||||+++++|.+++.....+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~q  104 (316)
T cd05619          34 ---------LMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAE  104 (316)
T ss_pred             ---------hhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                     011122345667777776 4999999999999999999999999999999999988778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       105 i~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619         105 IICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.92  E-value=4.2e-25  Score=208.30  Aligned_cols=151  Identities=29%  Similarity=0.423  Sum_probs=128.6

Q ss_pred             cCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ++|++.+.||+|+||.||++.+.    .+++..+|+|.+....                                     
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-------------------------------------   77 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-------------------------------------   77 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-------------------------------------
Confidence            47889999999999999998742    3445679999875421                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                           .......+.+|+.++..+ +||||+++++++...+..++||||+++|+|.+++....  
T Consensus        78 ---------------------~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~  136 (375)
T cd05104          78 ---------------------HLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDS  136 (375)
T ss_pred             ---------------------CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccc
Confidence                                 112234578899999999 89999999999999999999999999999999886421  


Q ss_pred             -------------------------------------------------------------------------CCCHHHH
Q psy14740        302 -------------------------------------------------------------------------NFDDATT  308 (362)
Q Consensus       302 -------------------------------------------------------------------------~l~~~~~  308 (362)
                                                                                               .+++..+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  216 (375)
T cd05104         137 FICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDL  216 (375)
T ss_pred             cccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHH
Confidence                                                                                     3677888


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       217 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~  265 (375)
T cd05104         217 LSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIR  265 (375)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceecc
Confidence            9999999999999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG1187|consensus

Probab=99.92  E-value=3.2e-25  Score=205.98  Aligned_cols=148  Identities=26%  Similarity=0.322  Sum_probs=128.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.-...||+|+||.||++....  +..+|||.+....                                         
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~--~~~vAVK~~~~~~-----------------------------------------  111 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD--GTVVAVKRLSSNS-----------------------------------------  111 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC--CCEEEEEEecCCC-----------------------------------------
Confidence            667777889999999999998553  3789999765421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-eEEEEEeccCCcchHHHHHhcC--CCCH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRDKG--NFDD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~--~l~~  305 (362)
                                       ... ...|.+|++++..++|||++++++++.+.+ ..++|+||+++|+|.+.+....  ++++
T Consensus       112 -----------------~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W  173 (361)
T KOG1187|consen  112 -----------------GQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDW  173 (361)
T ss_pred             -----------------Ccc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCH
Confidence                             011 344999999999999999999999999888 5999999999999999987654  7899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC---cEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRN---IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~---iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .....|+..++.||+|||...   ||||||||+|||+|.+.++||+|||+|+...
T Consensus       174 ~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  174 ETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             HHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence            999999999999999999854   9999999999999999999999999996543

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.92  E-value=6.1e-25  Score=207.10  Aligned_cols=152  Identities=30%  Similarity=0.463  Sum_probs=129.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|.+.+.||+|+||.||++....    ++...+|+|.+....                                    
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------------------------------   80 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA------------------------------------   80 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC------------------------------------
Confidence            4578999999999999999988532    334579999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                            .......+.+|+.+++.+ +||||+++++++...+.+|+||||+++|+|.+++...  
T Consensus        81 ----------------------~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~  138 (374)
T cd05106          81 ----------------------HTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAE  138 (374)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhh
Confidence                                  112235678899999999 8999999999999999999999999999999988542  


Q ss_pred             --------------------------------------------------------------------CCCCHHHHHHHH
Q psy14740        301 --------------------------------------------------------------------GNFDDATTRFYT  312 (362)
Q Consensus       301 --------------------------------------------------------------------~~l~~~~~~~~~  312 (362)
                                                                                          .+++...+..++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  218 (374)
T cd05106         139 TFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFS  218 (374)
T ss_pred             hhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHH
Confidence                                                                                136778899999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       219 ~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~  263 (374)
T cd05106         219 SQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIM  263 (374)
T ss_pred             HHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence            999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.92  E-value=7e-25  Score=202.36  Aligned_cols=143  Identities=36%  Similarity=0.689  Sum_probs=125.4

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++.+. .+++.+|+|.+.+...                                               
T Consensus         2 ~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------------   33 (318)
T cd05570           2 VLGKGSFGKVLLAELK-GTDELYAVKVLKKDVI-----------------------------------------------   33 (318)
T ss_pred             eeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHH-----------------------------------------------
Confidence            5899999999999865 4577899999875411                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                               ........+..|..+++.+ +||||+++++++...+.+|+||||+++++|...+.+.+.+++..+..++.|
T Consensus        34 ---------~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~q  104 (318)
T cd05570          34 ---------LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAE  104 (318)
T ss_pred             ---------hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence                     1122334567788888877 799999999999999999999999999999999988778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++.
T Consensus       105 i~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~  145 (318)
T cd05570         105 IVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKE  145 (318)
T ss_pred             HHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence            99999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.92  E-value=1.1e-24  Score=202.38  Aligned_cols=151  Identities=28%  Similarity=0.468  Sum_probs=132.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .++..+++|.+...                                        
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~-~~~~~~a~k~~~~~----------------------------------------   41 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHK-PSGLIMARKLIHLE----------------------------------------   41 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEEC-CCCcEEEEEEeecc----------------------------------------
Confidence            3578999999999999999999865 45777888876532                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++...+.+++.
T Consensus        42 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  103 (333)
T cd06650          42 ------------------IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ  103 (333)
T ss_pred             ------------------cCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHH
Confidence                              01122345789999999999999999999999999999999999999999999887789999


Q ss_pred             HHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..+
T Consensus       104 ~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650         104 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence            9999999999999999975 7999999999999999999999999998755

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.92  E-value=1.4e-24  Score=195.12  Aligned_cols=152  Identities=16%  Similarity=0.239  Sum_probs=130.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+|++.+.||+|+||.||++.+..  ..+..+|+|.+....                                     
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-------------------------------------   45 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-------------------------------------   45 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-------------------------------------
Confidence            34678999999999999999987543  335678999875431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                           .......+.+|+.+++.++||||+++++++..++..++||||+++++|.+++... ..+
T Consensus        46 ---------------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l  104 (266)
T cd05064          46 ---------------------SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQL  104 (266)
T ss_pred             ---------------------CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCC
Confidence                                 1122345788999999999999999999999999999999999999999998764 468


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||+|||++|++||||||+||+++.++.++++|||.+...
T Consensus       105 ~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064         105 VAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999999999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=8.4e-25  Score=206.22  Aligned_cols=148  Identities=23%  Similarity=0.380  Sum_probs=128.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++++.||+|+||.||++.+. .+++.+|+|.+....                                          
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~------------------------------------------   37 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDP-RDGKRVALKKMPNVF------------------------------------------   37 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEEC-CCCCEEEEEeccccc------------------------------------------
Confidence            4788999999999999999854 457889999874320                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                     .......++.+|+.+++.++||||+++++++..++     ..|+||||+ +++|.+.+...+.++
T Consensus        38 ---------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~l~  101 (372)
T cd07853          38 ---------------QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELM-QSDLHKIIVSPQPLS  101 (372)
T ss_pred             ---------------cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecc-ccCHHHHHhcCCCCC
Confidence                           01112345788999999999999999999998776     799999999 578888887777899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       102 ~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853         102 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999999999999999999999999999999999999999999999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG1989|consensus

Probab=99.92  E-value=6.2e-25  Score=213.73  Aligned_cols=147  Identities=31%  Similarity=0.398  Sum_probs=126.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .++++.++|.+|||+.||+++..+. +..+|+|.+-                                            
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~-~~~~AlKrm~--------------------------------------------   71 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKG-GKKYALKRMY--------------------------------------------   71 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCC-Cceeeeeeee--------------------------------------------
Confidence            4568889999999999999997654 4789999763                                            


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeee-eec------cceEEEEEeccCCcchHHHHHhc
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKT-FKD------KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~-~~~------~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                     ..+......+.+|+++|+.|. |||||.+++. ...      .-.++|+||||.||+|-+++...
T Consensus        72 ---------------~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~R  136 (738)
T KOG1989|consen   72 ---------------VNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTR  136 (738)
T ss_pred             ---------------cCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHH
Confidence                           234556677899999999995 9999999993 221      12588999999999999999853


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                        ..|++.+++.|+.++++|+.+||.+.  |||||||.+||||+.+|..||||||.|..
T Consensus       137 lq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  137 LQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             HhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence              45999999999999999999999998  99999999999999999999999998864

>KOG1152|consensus

Probab=99.92  E-value=2.8e-25  Score=206.06  Aligned_cols=163  Identities=29%  Similarity=0.486  Sum_probs=140.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+.+|..+..+|+|+||.|.++.+.. +...|++|.+.|..++-                                    
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~-n~~eVViK~I~KeRIL~------------------------------------  601 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKE-NNYEVVIKMIFKERILV------------------------------------  601 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecc-cceEEEeeehhhhhhhh------------------------------------
Confidence            56789999999999999999999665 47889999998874431                                    


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC---CcceeeeeeeeeccceEEEEEeccC-CcchHHHHHhcCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN---CDFIVKLYKTFKDKKYLYMLMESCL-GGELWTILRDKGN  302 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~  302 (362)
                            |.+         ...+..-.+-.|+.||..++   |+||+++.++|++++++||+||... |-+|.++|.....
T Consensus       602 ------DtW---------vrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~  666 (772)
T KOG1152|consen  602 ------DTW---------VRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPR  666 (772)
T ss_pred             ------hhh---------hcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCc
Confidence                  111         12223344667999999997   9999999999999999999999863 4599999998888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      +++..+..|++|+..|+++||++||+|||||-+|++++.+|.+||+|||.|....++.|
T Consensus       667 m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpf  725 (772)
T KOG1152|consen  667 MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF  725 (772)
T ss_pred             cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCc
Confidence            99999999999999999999999999999999999999999999999999987766654

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=1.5e-24  Score=193.75  Aligned_cols=148  Identities=36%  Similarity=0.620  Sum_probs=130.3

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.||+|+||.||++.+.+ .++.+|+|.+.....                                          
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~-~~~~~~~K~~~~~~~------------------------------------------   37 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK-NGQKVAVKIIDKSEI------------------------------------------   37 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT-TTEEEEEEEEESTTH------------------------------------------
T ss_pred             CEEeEEEEeCCCEEEEEEEECC-CCeEEEEEEeccccc------------------------------------------
Confidence            7889999999999999999664 577899999876421                                          


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF  310 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  310 (362)
                                     .........+|+.+++.++||||+++++++......+++||++++++|.+++...+.+++..+..
T Consensus        38 ---------------~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~  102 (260)
T PF00069_consen   38 ---------------EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILK  102 (260)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHH
T ss_pred             ---------------cccccchhhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                           11112233459999999999999999999999999999999999999999998778899999999


Q ss_pred             HHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       311 ~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.|++.||.+||+++++|+||||+||+++.++.++|+|||.+..+
T Consensus       103 ~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen  103 IAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             HHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999999999999999999753

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=2e-24  Score=217.50  Aligned_cols=152  Identities=26%  Similarity=0.352  Sum_probs=130.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~-~tg~~VAIK~I~~~l----------------------------------------   39 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDP-VCSRRVALKKIREDL----------------------------------------   39 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEEC-CCCcEEEEEEECccc----------------------------------------
Confidence            468999999999999999999855 457889999885421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-------
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-------  300 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------  300 (362)
                                      ........++.+|+.+++.++||||+++++++.+++..|++|||++|++|.+++...       
T Consensus        40 ----------------~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~  103 (932)
T PRK13184         40 ----------------SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLS  103 (932)
T ss_pred             ----------------ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccc
Confidence                            111223456889999999999999999999999999999999999999999988641       


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 ----GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ----~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                          ..++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       104 e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        104 KELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             hhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence                12455677889999999999999999999999999999999999999999999876

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.92  E-value=3e-24  Score=194.18  Aligned_cols=144  Identities=35%  Similarity=0.567  Sum_probs=122.6

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||++... .+++.+|+|.+.+...                                                
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~------------------------------------------------   31 (277)
T cd05607           1 LGKGGFGEVCAVQVK-NTGKMYACKKLDKKRL------------------------------------------------   31 (277)
T ss_pred             CCCCCceEEEEEEEc-cCCcEEEEEEEcHHHh------------------------------------------------
Confidence            699999999999855 4588999998865311                                                


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTAC  314 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~q  314 (362)
                              ...........|+++++.++||||+++++.+..+.++|++|||+++++|.+++....  .+++..+..++.|
T Consensus        32 --------~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~q  103 (277)
T cd05607          32 --------KKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQ  103 (277)
T ss_pred             --------hcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHH
Confidence                    011112335569999999999999999999999999999999999999998876533  4889999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|||+.|++||||||+||+++.++.++|+|||++..+.
T Consensus       104 i~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~  146 (277)
T cd05607         104 ITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELK  146 (277)
T ss_pred             HHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecC
Confidence            9999999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.92  E-value=3.1e-24  Score=197.14  Aligned_cols=150  Identities=24%  Similarity=0.371  Sum_probs=128.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.+.+.||+|+||.||++... .+++.+|+|.+....                                       
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~---------------------------------------   43 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSK-LTENLVALKEIRLEH---------------------------------------   43 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEec-CCCCeEEEEEeeccc---------------------------------------
Confidence            4678999999999999999999854 457789999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                         .......+.+|+.+++.++||||+++++++..++..|+||||++ ++|.+++...+ .++.
T Consensus        44 -------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~  103 (309)
T cd07872          44 -------------------EEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGNIMSM  103 (309)
T ss_pred             -------------------cCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcCCCCCH
Confidence                               01112346689999999999999999999999999999999995 58888776543 4889


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       104 ~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872         104 HNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceec
Confidence            999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG4236|consensus

Probab=99.92  E-value=3.3e-24  Score=197.05  Aligned_cols=148  Identities=32%  Similarity=0.518  Sum_probs=126.4

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      ++||+|.||.||-+++. .+|+.||+|++.|-..                                              
T Consensus       570 evLGSGQFG~VYgg~hR-ktGrdVAvKvIdKlrF----------------------------------------------  602 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHR-KTGRDVAVKVIDKLRF----------------------------------------------  602 (888)
T ss_pred             hhccCCcceeeecceec-ccCceeeeeeeecccC----------------------------------------------
Confidence            67999999999999865 5699999999977421                                              


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHH-Hh-cCCCCHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RD-KGNFDDATTRFYT  312 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l-~~-~~~l~~~~~~~~~  312 (362)
                                 ......++..|+.||+++.||.||.+-..|+..+.+|+|||.+ .|+..+.| .. .+++++...++++
T Consensus       603 -----------p~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GDMLEMILSsEkgRL~er~TkFlv  670 (888)
T KOG4236|consen  603 -----------PTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGDMLEMILSSEKGRLPERITKFLV  670 (888)
T ss_pred             -----------CCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cchHHHHHHHhhcccchHHHHHHHH
Confidence                       1122366889999999999999999999999999999999999 55555544 43 4679999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCC---CcEEEEecccceecCCCCC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~---~~~kl~DFG~a~~~~~~~~  361 (362)
                      .||+.||.|||.++|+|+||||+|+|+...   ..+||||||+||.++...|
T Consensus       671 tQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  671 TQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             HHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence            999999999999999999999999999754   4699999999999876544

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.92  E-value=4.1e-24  Score=194.40  Aligned_cols=151  Identities=25%  Similarity=0.410  Sum_probs=123.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|++...||+|+||.||++.+....++.+|+|.+....                                         
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-----------------------------------------   39 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-----------------------------------------   39 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEeccc-----------------------------------------
Confidence            368899999999999999998765557789999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHhc
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                      ..........+|+.+++.+   +||||+++++++.     ....++++||++ .++|.+++...
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~  102 (290)
T cd07862          40 ----------------GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKV  102 (290)
T ss_pred             ----------------CCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccC-CCCHHHHHHhC
Confidence                            0011123345677666655   7999999999874     345699999999 46899988753


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                        ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++...
T Consensus       103 ~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862         103 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence              348999999999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.92  E-value=1e-24  Score=204.14  Aligned_cols=148  Identities=30%  Similarity=0.428  Sum_probs=126.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|..++.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------  111 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHR-PTGRLYALKVIYGNH---------------------------------------  111 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEEC-CCCCEEEEEEEecCC---------------------------------------
Confidence            4567788899999999999999855 457889999874320                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                         .......+.+|+.+++.++||||+++++++...+.+|+||||+++++|...    ...++.
T Consensus       112 -------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~  168 (353)
T PLN00034        112 -------------------EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQ  168 (353)
T ss_pred             -------------------cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHH
Confidence                               112235678999999999999999999999999999999999999998642    345778


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       169 ~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        169 FLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA  219 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence            888999999999999999999999999999999999999999999998653

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2.8e-24  Score=203.98  Aligned_cols=145  Identities=26%  Similarity=0.357  Sum_probs=127.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..+|.++..||.|+||.||++...+ ..+..+++|.+...                                        
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------------------------------------  130 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------------------------------------  130 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------------------------------------
Confidence            3579999999999999999987543 33567888876432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                              ....+|+.+++.++||||+++++++.....+|++||++ +++|.+++.....+++.
T Consensus       131 ------------------------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~l~~~  185 (392)
T PHA03207        131 ------------------------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY-KCDLFTYVDRSGPLPLE  185 (392)
T ss_pred             ------------------------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc-CCCHHHHHHhcCCCCHH
Confidence                                    12357999999999999999999999999999999998 57899988766789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       186 ~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        186 QAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD  236 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence            999999999999999999999999999999999999999999999997654

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.92  E-value=4.8e-24  Score=193.29  Aligned_cols=153  Identities=24%  Similarity=0.349  Sum_probs=130.1

Q ss_pred             cccCcEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .+++|++.+.||+|+||.||++...   ...+..+++|.+...                                     
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~-------------------------------------   45 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI-------------------------------------   45 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC-------------------------------------
Confidence            4678999999999999999998752   234567888877532                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---  300 (362)
                                           ........+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++...   
T Consensus        46 ---------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  104 (283)
T cd05090          46 ---------------------NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPH  104 (283)
T ss_pred             ---------------------CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCC
Confidence                                 11122345788999999999999999999999999999999999999999988532   


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                    ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (283)
T cd05090         105 SDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIY  175 (283)
T ss_pred             CccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccccccccc
Confidence                          237788899999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=5.5e-24  Score=195.48  Aligned_cols=150  Identities=28%  Similarity=0.457  Sum_probs=131.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .++..+++|.+....                                         
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~~~a~k~~~~~~-----------------------------------------   38 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHR-PSGLIMARKLIHLEI-----------------------------------------   38 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEc-CCCeEEEEEEecccc-----------------------------------------
Confidence            46899999999999999999855 457778888765320                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       ......++.+|+++++.++||||+++++.+..++.+|++|||+++++|.+++.+.+.+++..+
T Consensus        39 -----------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~  101 (308)
T cd06615          39 -----------------KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENIL  101 (308)
T ss_pred             -----------------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHH
Confidence                             112334578899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||++..+.
T Consensus       102 ~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615         102 GKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             HHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            9999999999999997 699999999999999999999999999987653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.92  E-value=3.5e-24  Score=192.39  Aligned_cols=151  Identities=28%  Similarity=0.429  Sum_probs=133.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.||+|+||.||++... .+++.+++|.+....                                       
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~~---------------------------------------   46 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNL-HTGELAAVKIIKLEP---------------------------------------   46 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEEC-CCCeEEEEEEEecCc---------------------------------------
Confidence            4578999999999999999999864 457789999875320                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                          ......+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+.+++.
T Consensus        47 --------------------~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~  106 (267)
T cd06646          47 --------------------GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSEL  106 (267)
T ss_pred             --------------------cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHH
Confidence                                011234678999999999999999999999999999999999999999999877789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646         107 QIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            999999999999999999999999999999999999999999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=5.3e-24  Score=190.63  Aligned_cols=153  Identities=33%  Similarity=0.495  Sum_probs=133.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.+|+|+||.||.+... .+++.+++|.+.....                                        
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~~lk~~~~~~~----------------------------------------   40 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDV-DTGRELAVKQVPFDPD----------------------------------------   40 (263)
T ss_pred             CcccccceecCCCceEEEEEEEc-CCCcEEEEEEEeeccc----------------------------------------
Confidence            46889999999999999999854 5578899998754310                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                    ..........+.+|+.+++.++||||+++++++..++.+|++||++++++|.+++...+.+++..+
T Consensus        41 --------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~  106 (263)
T cd06625          41 --------------SPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVT  106 (263)
T ss_pred             --------------chhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHH
Confidence                          001112235678899999999999999999999999999999999999999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+++.+
T Consensus       107 ~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625         107 RKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            999999999999999999999999999999999999999999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=3.3e-24  Score=196.50  Aligned_cols=152  Identities=26%  Similarity=0.456  Sum_probs=128.7

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      +.+.+++|++.+.||+|+||.||++.+.. ++.  .+++|.+...                                   
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~-~~~~~~~~ik~~~~~-----------------------------------   45 (303)
T cd05088           2 PVLEWNDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEY-----------------------------------   45 (303)
T ss_pred             CccchhhceeeeeecCCCCceEEEEEEcc-CCceeeEEEEEeccc-----------------------------------
Confidence            34568899999999999999999998654 343  3466654321                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             ........+.+|+.++..+ +||||+++++++...+.+|++|||+++++|.+++.+.
T Consensus        46 -----------------------~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  102 (303)
T cd05088          46 -----------------------ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS  102 (303)
T ss_pred             -----------------------CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhc
Confidence                                   1122335678899999999 8999999999999999999999999999999998753


Q ss_pred             C----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        301 G----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       301 ~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      +                .+++..++.++.|++.||.|||++|++||||||+|||++.++.++|+|||+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         103 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             ccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCc
Confidence            2                47889999999999999999999999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=7.3e-24  Score=192.46  Aligned_cols=149  Identities=32%  Similarity=0.591  Sum_probs=128.5

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |+..+.||+|+||.||++... .+++.+|+|.+.+..                                           
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~-~~~~~~aiK~~~~~~-------------------------------------------   37 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVR-ATGKMYACKRLEKKR-------------------------------------------   37 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEC-CCCcEEEEEEeehhh-------------------------------------------
Confidence            677888999999999999865 457889999886531                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~  308 (362)
                                   .........+.+|+.+++.++||||+.+++.+..++..+++|||+++++|.+.+...  ..+++..+
T Consensus        38 -------------~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  104 (285)
T cd05632          38 -------------IKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERA  104 (285)
T ss_pred             -------------hhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHH
Confidence                         111122344678999999999999999999999999999999999999999887643  35999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus       105 ~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632         105 LFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence            999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=7.5e-24  Score=192.41  Aligned_cols=149  Identities=31%  Similarity=0.584  Sum_probs=128.3

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |+..+.||+|+||.||++... .+++.+|+|.+.+..                                           
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~-~~~~~~avK~~~~~~-------------------------------------------   37 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKR-------------------------------------------   37 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEc-CCCceEEEEEEehhh-------------------------------------------
Confidence            678889999999999999855 457889999876431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~  308 (362)
                                   .........+..|+.+++.++||+|+.+++.+...+.+|++|||+++++|.+++...  ..+++..+
T Consensus        38 -------------~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~  104 (285)
T cd05630          38 -------------IKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRA  104 (285)
T ss_pred             -------------ccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHH
Confidence                         011112244678999999999999999999999999999999999999999988643  35899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++...
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630         105 VFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence            999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.91  E-value=4.4e-24  Score=202.50  Aligned_cols=152  Identities=29%  Similarity=0.441  Sum_probs=127.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|.+.+.||+|+||.||.+.+.+.    +...+|+|.+.+..                                    
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~------------------------------------   79 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA------------------------------------   79 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC------------------------------------
Confidence            45788889999999999999885432    23468999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                            .....+.+.+|+.+++.++ ||||+++++++...+.+|+||||+++|+|.+++..+  
T Consensus        80 ----------------------~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~  137 (400)
T cd05105          80 ----------------------RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRD  137 (400)
T ss_pred             ----------------------ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhh
Confidence                                  1122356889999999996 999999999999999999999999999999887642  


Q ss_pred             --------------------------------------------------------------------------------
Q psy14740        301 --------------------------------------------------------------------------------  300 (362)
Q Consensus       301 --------------------------------------------------------------------------------  300 (362)
                                                                                                      
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
T cd05105         138 NFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGS  217 (400)
T ss_pred             hhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCc
Confidence                                                                                            


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                    ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||+++.+.
T Consensus       218 ~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~  288 (400)
T cd05105         218 NDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIM  288 (400)
T ss_pred             chhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecc
Confidence                          136777888999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.91  E-value=7.7e-24  Score=189.22  Aligned_cols=149  Identities=28%  Similarity=0.470  Sum_probs=129.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.+|+|+||.||.+...+  +..+|+|.+....                                        
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~aik~~~~~~----------------------------------------   40 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGS----------------------------------------   40 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC--CCcEEEEEcCCCc----------------------------------------
Confidence            4678999999999999999997543  4458999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                          .....+.+|+.+++.++||||+++++++...+.+|++|||+++++|.+++... ..+++.
T Consensus        41 --------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~  100 (256)
T cd05113          41 --------------------MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPS  100 (256)
T ss_pred             --------------------ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHH
Confidence                                01244788999999999999999999999889999999999999999998764 368999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||+++.+..
T Consensus       101 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113         101 QLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            9999999999999999999999999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=7.8e-24  Score=194.14  Aligned_cols=150  Identities=35%  Similarity=0.626  Sum_probs=132.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.+|+|+||.||++.+. ..++.+++|.+.+..                                         
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~-~~~~~v~ik~~~~~~-----------------------------------------   38 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHK-ETRQRFAMKKINKQN-----------------------------------------   38 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEEC-CCCcEEEEEEeehhh-----------------------------------------
Confidence            46899999999999999999855 457889999876531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     .........+.+|+++++.++||||+++++.+..++++|++|||++|++|.+++...+.+++..+
T Consensus        39 ---------------~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  103 (305)
T cd05609          39 ---------------LILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA  103 (305)
T ss_pred             ---------------hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence                           01112334677899999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.
T Consensus       104 ~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609         104 RMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            99999999999999999999999999999999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=5.8e-24  Score=196.00  Aligned_cols=153  Identities=23%  Similarity=0.378  Sum_probs=128.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCC---CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDP---SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      +...+|++...||+|+||.||++.+....   ...+|+|.+...                                    
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~------------------------------------   47 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA------------------------------------   47 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc------------------------------------
Confidence            35678999999999999999999854321   224788876432                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-  301 (362)
                                            ......+.+.+|+.+++.++||||+++++++... ..+++++|+++|+|.+++.... 
T Consensus        48 ----------------------~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~  104 (316)
T cd05108          48 ----------------------TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD  104 (316)
T ss_pred             ----------------------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccc
Confidence                                  1122345678899999999999999999988764 5789999999999999998643 


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++...+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108         105 NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence            58899999999999999999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.91  E-value=7.4e-24  Score=189.17  Aligned_cols=148  Identities=28%  Similarity=0.464  Sum_probs=128.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++....  +..+++|.+.+..                                        
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~a~K~~~~~~----------------------------------------   40 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRA--QIKVAIKAINEGA----------------------------------------   40 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEecc--CceEEEEecccCC----------------------------------------
Confidence            3578899999999999999997543  4568999765431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                          .....+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++... +.+++.
T Consensus        41 --------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~  100 (256)
T cd05114          41 --------------------MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKD  100 (256)
T ss_pred             --------------------ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHH
Confidence                                11245788999999999999999999999999999999999999999998753 458999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.++...
T Consensus       101 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114         101 MLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccC
Confidence            999999999999999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.91  E-value=6.2e-24  Score=199.34  Aligned_cols=149  Identities=22%  Similarity=0.350  Sum_probs=125.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   58 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDT-VLGINVAVKKLSRPF---------------------------------------   58 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEc-CCCceeEEEEecccc---------------------------------------
Confidence            4688999999999999999999854 457889999886431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ..+|+||||++ ++|.+.+.  
T Consensus        59 ------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--  117 (359)
T cd07876          59 ------------------QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIH--  117 (359)
T ss_pred             ------------------cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHh--
Confidence                              1122234567899999999999999999988644      35799999995 56766664  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       118 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         118 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            34889999999999999999999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.91  E-value=7.5e-24  Score=206.25  Aligned_cols=153  Identities=24%  Similarity=0.376  Sum_probs=129.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~i~~~~---------------------------------------   69 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRV-SDGEPFAVKVVDMEG---------------------------------------   69 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEc-CCCCEEEEEEEeccc---------------------------------------
Confidence            4579999999999999999999855 457899999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--------eEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--------YLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~  298 (362)
                                        ........+.+|+.++..++|+||++++..+...+        .+++||||+++|+|.+++.
T Consensus        70 ------------------~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~  131 (496)
T PTZ00283         70 ------------------MSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIK  131 (496)
T ss_pred             ------------------CCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHH
Confidence                              11223345778999999999999999988765332        4789999999999999886


Q ss_pred             hc----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        299 DK----GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~~----~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..    ..+++..+..++.|++.||.|+|+++|+||||||+|||++.++.+||+|||+++.+.
T Consensus       132 ~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~  194 (496)
T PTZ00283        132 SRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYA  194 (496)
T ss_pred             HhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecc
Confidence            42    458999999999999999999999999999999999999999999999999998653

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.91  E-value=5.2e-24  Score=189.67  Aligned_cols=143  Identities=24%  Similarity=0.427  Sum_probs=124.4

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+++|.+.+.                                                 
T Consensus         2 ~lg~g~~g~vy~~~~~-~~~~~~a~k~~~~~-------------------------------------------------   31 (252)
T cd05084           2 RIGRGNFGEVFSGRLR-ADNTPVAVKSCRET-------------------------------------------------   31 (252)
T ss_pred             ccCcccCccEEEEEEe-cCCceEEEEecCcc-------------------------------------------------
Confidence            5899999999999864 45778999976432                                                 


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~q  314 (362)
                               ........+.+|+++++.++||||+++++++......|+||||+++++|.+++...+ .+++..+..++.|
T Consensus        32 ---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~q  102 (252)
T cd05084          32 ---------LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVEN  102 (252)
T ss_pred             ---------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence                     111233567889999999999999999999999999999999999999999987644 5899999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|||++|++|+||||+||+++.++.++|+|||+++...
T Consensus       103 i~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084         103 AAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEE  145 (252)
T ss_pred             HHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccc
Confidence            9999999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.91  E-value=9.2e-24  Score=189.81  Aligned_cols=152  Identities=24%  Similarity=0.358  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+|++.+.||+|+||.||++.....  ....+++|.+....                                      
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--------------------------------------   44 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--------------------------------------   44 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--------------------------------------
Confidence            45788999999999999999986432  23368888764320                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                          .......+..|+.+++.++||||+++++++..++.+|++|||+++++|.+++... ..++
T Consensus        45 --------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  104 (267)
T cd05066          45 --------------------TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFT  104 (267)
T ss_pred             --------------------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCC
Confidence                                1123356788999999999999999999999999999999999999999999764 4589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066         105 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            99999999999999999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.91  E-value=1.1e-23  Score=189.22  Aligned_cols=153  Identities=23%  Similarity=0.424  Sum_probs=131.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+.+.+|.|+||.||++... .+++.+++|.+....                                        
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~----------------------------------------   39 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCL-LDRKPVALKKVQIFE----------------------------------------   39 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEe-CCCCEEEEEEeeccc----------------------------------------
Confidence            367999999999999999999855 457889999775421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l  303 (362)
                                      .........+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++..    ...+
T Consensus        40 ----------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~  103 (267)
T cd08228          40 ----------------MMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLI  103 (267)
T ss_pred             ----------------cCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCC
Confidence                            11122345678899999999999999999999999999999999999999988753    2348


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++..+.
T Consensus       104 ~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228         104 PERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            899999999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.91  E-value=6.6e-24  Score=189.64  Aligned_cols=152  Identities=36%  Similarity=0.682  Sum_probs=134.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||.+.+. .+++.+++|.+.+..                                          
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~------------------------------------------   37 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKR-DTKKMFAMKYMNKQK------------------------------------------   37 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEc-cCCcEEEEEEEehhh------------------------------------------
Confidence            4889999999999999999854 567889999986541                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                    .........+.+|+++++.++||||+++++.+..+...|+++||+++++|.+++....++++..+.
T Consensus        38 --------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  103 (258)
T cd05578          38 --------------CVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVK  103 (258)
T ss_pred             --------------hcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHH
Confidence                          111223466889999999999999999999999999999999999999999999877789999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.|++.||.|||+++++|+||+|+||+++.++.++|+|||.+.....
T Consensus       104 ~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578         104 FWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            9999999999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG4717|consensus

Probab=99.91  E-value=2e-24  Score=198.12  Aligned_cols=153  Identities=30%  Similarity=0.495  Sum_probs=134.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .-|.+.+.||+|.|+.|.++++.. +|+.||+|++.|...                                        
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVF-TGekVAVKviDKTKl----------------------------------------   56 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVF-TGEKVAVKVIDKTKL----------------------------------------   56 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhc-ccceeEEEEeccccc----------------------------------------
Confidence            346777889999999999999775 588999999987521                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~  307 (362)
                                       +.....++.+|+..|+.++|||||++|.+......+|+|+|+=++|+|+++|-++ ..+.++.
T Consensus        57 -----------------D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~L  119 (864)
T KOG4717|consen   57 -----------------DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDL  119 (864)
T ss_pred             -----------------chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHH
Confidence                             2233466889999999999999999999999999999999999999999998764 4699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~~~  359 (362)
                      ++.|+.||+.|+.|||...++||||||+|+++. +-|.+||+|||++-.+.++
T Consensus       120 a~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen  120 AKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            999999999999999999999999999999986 4689999999999877654

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.5e-23  Score=187.70  Aligned_cols=148  Identities=24%  Similarity=0.372  Sum_probs=130.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||.|+||.||++....  ++.+++|.+....                                        
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~--~~~v~iK~~~~~~----------------------------------------   42 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN--TTPVAVKTLKPGT----------------------------------------   42 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC--CeEEEEEeeCCCc----------------------------------------
Confidence            4578999999999999999998543  4679999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~  305 (362)
                                          .....+.+|+.+++.++||||+++++++...+..|++||++++++|.+++....  .++.
T Consensus        43 --------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  102 (261)
T cd05068          43 --------------------MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKL  102 (261)
T ss_pred             --------------------ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCH
Confidence                                112447789999999999999999999999999999999999999999997643  6899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       103 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068         103 PQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            9999999999999999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.91  E-value=7.2e-24  Score=198.58  Aligned_cols=150  Identities=24%  Similarity=0.366  Sum_probs=126.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||.+.+. ..++.+|+|.+.+..                                       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   54 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPF---------------------------------------   54 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEec-CCCceEEEEEeCCcc---------------------------------------
Confidence            4688999999999999999999854 557889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ..+|++|||++ +++.+.+.. 
T Consensus        55 ------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-  114 (355)
T cd07874          55 ------------------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM-  114 (355)
T ss_pred             ------------------cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh-
Confidence                              1122335577899999999999999999987543      35799999995 567776653 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       115 -~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874         115 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             -cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence             48899999999999999999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=1.1e-23  Score=192.03  Aligned_cols=109  Identities=24%  Similarity=0.371  Sum_probs=101.1

Q ss_pred             hhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-----------CCCHHHHHHHHHHHHH
Q psy14740        249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-----------NFDDATTRFYTACVVE  317 (362)
Q Consensus       249 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~ql~~  317 (362)
                      ....+.+|+.+++.++||||+++++++..++..+++||++++++|.+++....           .+++..++.++.|++.
T Consensus        62 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  141 (296)
T cd05051          62 AREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS  141 (296)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHH
Confidence            34567889999999999999999999999999999999999999999997655           6899999999999999


Q ss_pred             HHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        318 AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       318 al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       142 al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05051         142 GMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             HHHHHHHcCccccccchhceeecCCCceEEccccceeecc
Confidence            9999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.91  E-value=1.4e-23  Score=191.96  Aligned_cols=150  Identities=25%  Similarity=0.385  Sum_probs=129.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.+.+.||.|+||.||++... .+++.+|+|.+....                                       
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~vaiK~~~~~~---------------------------------------   43 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSK-LTDNLVALKEIRLEH---------------------------------------   43 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEc-CCCcEEEEEEEeccc---------------------------------------
Confidence            5788999999999999999999855 457789999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                         .......+.+|+.+++.++||||+++++++..++.+|+||||++ ++|.+++... ..+++
T Consensus        44 -------------------~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~  103 (301)
T cd07873          44 -------------------EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINM  103 (301)
T ss_pred             -------------------ccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCH
Confidence                               01112345689999999999999999999999999999999995 6888887654 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++..
T Consensus       104 ~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  154 (301)
T cd07873         104 HNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAK  154 (301)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence            999999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=4.2e-24  Score=191.92  Aligned_cols=150  Identities=26%  Similarity=0.458  Sum_probs=131.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||.+.+. .+++.+++|.+....                                        
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~----------------------------------------   46 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNV-NTGELAAIKVIKLEP----------------------------------------   46 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEc-CCCcEEEEEEEecCc----------------------------------------
Confidence            356788888999999999999855 457889999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++.+...+.+|++|||+++++|.+++...+.+++..
T Consensus        47 -------------------~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  107 (267)
T cd06645          47 -------------------GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQ  107 (267)
T ss_pred             -------------------hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHH
Confidence                               1112346789999999999999999999999999999999999999999998878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+.
T Consensus       108 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645         108 IAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            99999999999999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.91  E-value=1.3e-23  Score=202.04  Aligned_cols=146  Identities=28%  Similarity=0.369  Sum_probs=120.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++... .+++.+|+|.+.+..                                       
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~-~~~~~vAiK~i~~~~---------------------------------------  103 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICI-DTSEKVAIKKVLQDP---------------------------------------  103 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEEC-CCCCEEEEEEEecCc---------------------------------------
Confidence            3567999999999999999999854 557889999764320                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--------cceEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--------KKYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~  298 (362)
                                              ....+|+.+|+.++||||+++++++..        ..++++||||++ ++|.+++.
T Consensus       104 ------------------------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~  158 (440)
T PTZ00036        104 ------------------------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMK  158 (440)
T ss_pred             ------------------------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHH
Confidence                                    113469999999999999999887643        235789999995 57776664


Q ss_pred             h----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecC
Q psy14740        299 D----KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~----~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~  357 (362)
                      .    ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+|+.+.
T Consensus       159 ~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        159 HYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence            2    35689999999999999999999999999999999999998664 69999999998654

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=2.2e-23  Score=188.98  Aligned_cols=152  Identities=24%  Similarity=0.423  Sum_probs=131.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++...+|+|+||.||++... .+++.+++|.+....                                         
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~-----------------------------------------   38 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNR-ETGQIVAIKKFVESE-----------------------------------------   38 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEEC-CCCcEEEEEEEeecc-----------------------------------------
Confidence            46899999999999999999855 457889999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ......+.+.+|+.+++.++|||++++++++.....++++|||+++++|..++.....+++..+
T Consensus        39 ----------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~  102 (286)
T cd07847          39 ----------------DDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLI  102 (286)
T ss_pred             ----------------cCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHH
Confidence                            0011223467899999999999999999999999999999999999888888776667999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+..
T Consensus       103 ~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847         103 KKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            99999999999999999999999999999999999999999999987644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=2.1e-23  Score=189.19  Aligned_cols=150  Identities=29%  Similarity=0.455  Sum_probs=127.8

Q ss_pred             cCcEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+|++++.||+|+||.||.+...   ...++.+++|.+...                                       
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---------------------------------------   44 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---------------------------------------   44 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---------------------------------------
Confidence            57899999999999999998742   234678999987532                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                          .......+.+|+++++.++||||+++++++..  ...+++||||+++++|.+++.+. ..
T Consensus        45 --------------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  104 (284)
T cd05081          45 --------------------TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRER  104 (284)
T ss_pred             --------------------CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcC
Confidence                                11223557889999999999999999987543  35689999999999999998764 45


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       105 l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081         105 LDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            8999999999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.91  E-value=5.9e-24  Score=198.20  Aligned_cols=151  Identities=21%  Similarity=0.386  Sum_probs=127.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+++.||.|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   52 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDT-RLRQKVAVKKLSRPF---------------------------------------   52 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEEC-CCCCEEEEEEeCchh---------------------------------------
Confidence            3467999999999999999999855 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ...|++|+++ +++|.+++.. 
T Consensus        53 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-  112 (343)
T cd07878          53 ------------------QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-  112 (343)
T ss_pred             ------------------hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-
Confidence                              1112234467899999999999999999987533      4579999998 8899888764 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       113 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878         113 QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence            569999999999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.91  E-value=2.1e-23  Score=187.66  Aligned_cols=152  Identities=24%  Similarity=0.360  Sum_probs=131.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+|++.+.+|.|+||.||++....+.  ...+++|.+.+.                                       
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~---------------------------------------   43 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG---------------------------------------   43 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC---------------------------------------
Confidence            467899999999999999999865432  236899987542                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ........+..|+.+++.++||||+++++++..+...+++|||+++++|.+++... +.++
T Consensus        44 -------------------~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  104 (269)
T cd05065          44 -------------------YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFT  104 (269)
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCC
Confidence                               01223456889999999999999999999999999999999999999999998764 4589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065         105 VIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            99999999999999999999999999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0574|consensus

Probab=99.91  E-value=1e-25  Score=194.19  Aligned_cols=146  Identities=28%  Similarity=0.513  Sum_probs=131.6

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+...||+|+||.|+++.+. .+|+-+|||.+.-                                             
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~-EsG~v~AIK~VPV---------------------------------------------   68 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHR-ESGHVLAIKKVPV---------------------------------------------   68 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHh-ccCcEEEEEecCc---------------------------------------------
Confidence            556788999999999999855 6799999997632                                             


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~  309 (362)
                                      ....+.+..|+.||++++.|++|++|++|-....+|+|||||..|++.++++- ++++++..+.
T Consensus        69 ----------------~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs  132 (502)
T KOG0574|consen   69 ----------------DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEIS  132 (502)
T ss_pred             ----------------cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHH
Confidence                            23557788999999999999999999999988999999999999999999874 5679999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..+.||+|||...-||||||..|||++.+|..||+|||.|.++++
T Consensus       133 ~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD  181 (502)
T KOG0574|consen  133 AVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD  181 (502)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence            9999999999999999999999999999999999999999999988753

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.1e-23  Score=188.09  Aligned_cols=148  Identities=27%  Similarity=0.449  Sum_probs=128.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.+|+|+||.||++.+.  .+..+++|.+.+...                                       
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~--~~~~~~iK~~~~~~~---------------------------------------   41 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWR--GKIDVAIKMIREGAM---------------------------------------   41 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEec--CCccEEEEEeccCCC---------------------------------------
Confidence            356888999999999999999854  255789998754310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                           ....+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++... ..+++.
T Consensus        42 ---------------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  100 (256)
T cd05059          42 ---------------------SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTE  100 (256)
T ss_pred             ---------------------CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHH
Confidence                                 1234678999999999999999999999999999999999999999998753 468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...
T Consensus       101 ~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059         101 WLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecc
Confidence            999999999999999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-23  Score=189.51  Aligned_cols=150  Identities=27%  Similarity=0.418  Sum_probs=129.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.+.+.||+|+||.||++... .+++.+++|.+....                                       
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~-~~~~~~~iK~~~~~~---------------------------------------   42 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSK-LTGQLVALKEIRLEH---------------------------------------   42 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEc-CCCcEEEEEEEeccc---------------------------------------
Confidence            4688999999999999999999854 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                         .......+.+|+++++.++||||+++++++...+..|+||||++ ++|.+++... ..+++
T Consensus        43 -------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~  102 (291)
T cd07844          43 -------------------EEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGGGLSM  102 (291)
T ss_pred             -------------------ccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCCCCCH
Confidence                               00111235689999999999999999999999999999999996 5899988754 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||+++..
T Consensus       103 ~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         103 HNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence            999999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=3.4e-23  Score=184.58  Aligned_cols=151  Identities=28%  Similarity=0.493  Sum_probs=132.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.+|+|+||.||++... .+++.+++|.+....                                          
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~-~~~~~~~~k~~~~~~------------------------------------------   37 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRK-ADKRVYAMKQIDLSK------------------------------------------   37 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEc-CCCcEEEEEEeehhh------------------------------------------
Confidence            5788999999999999999865 457889999875421                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                     ........+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++...  ..+++..
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  102 (256)
T cd08529          38 ---------------MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQ  102 (256)
T ss_pred             ---------------CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHH
Confidence                           11223456788999999999999999999999999999999999999999998764  4689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       103 ~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~  153 (256)
T cd08529         103 VWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD  153 (256)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence            999999999999999999999999999999999999999999999887643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=3e-23  Score=186.19  Aligned_cols=154  Identities=33%  Similarity=0.500  Sum_probs=130.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|++.+.+|+|+||.||.+.+. ++++.+++|.+.....                                        
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~-~~~~~v~ik~~~~~~~----------------------------------------   40 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDA-DTGRELAVKQVQFDPE----------------------------------------   40 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEc-CCCcEEEEEEeecCcC----------------------------------------
Confidence            47899999999999999999854 5678899998743210                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                    ..........+.+|+.+++.++||||+++++++.+.  ..++++|||+++++|.+++.+...+++.
T Consensus        41 --------------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~  106 (265)
T cd06652          41 --------------SPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTEN  106 (265)
T ss_pred             --------------CcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHH
Confidence                          001112335678899999999999999999988663  5789999999999999999877778999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652         107 VTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence            999999999999999999999999999999999999999999999987543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.91  E-value=1.7e-23  Score=190.29  Aligned_cols=151  Identities=25%  Similarity=0.402  Sum_probs=129.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|.+...+|.|+||.||++....    ..+..+++|.+...                                     
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-------------------------------------   46 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-------------------------------------   46 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-------------------------------------
Confidence            3578899999999999999997422    23445788876432                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            .......+.+|+.+++.++||||+++++++...+.+|++|||+++++|.+++...+  
T Consensus        47 ----------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~  104 (288)
T cd05093          47 ----------------------SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPD  104 (288)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCc
Confidence                                  12234557889999999999999999999999999999999999999999987543  


Q ss_pred             -----------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 -----------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 -----------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                 .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  171 (288)
T cd05093         105 AVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY  171 (288)
T ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCcccccc
Confidence                       38999999999999999999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.91  E-value=2.2e-23  Score=187.22  Aligned_cols=152  Identities=24%  Similarity=0.364  Sum_probs=131.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -++|++.+.||+|+||.||++.+...  ....+++|.+...                                       
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~---------------------------------------   43 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG---------------------------------------   43 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC---------------------------------------
Confidence            35789999999999999999986532  2457888876532                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ........+..|+.+++.++||||+++++++...+..+++|||+++++|.+++... +.++
T Consensus        44 -------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~  104 (266)
T cd05033          44 -------------------SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFT  104 (266)
T ss_pred             -------------------CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCC
Confidence                               11123345788999999999999999999999999999999999999999998764 4689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033         105 VGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            99999999999999999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.91  E-value=3.5e-23  Score=185.70  Aligned_cols=152  Identities=22%  Similarity=0.418  Sum_probs=132.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.+|+|+||.||++... .+++.+++|.+....                                         
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   39 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICL-LDGRVVALKKVQIFE-----------------------------------------   39 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEc-CCCCEEEEEEeeccc-----------------------------------------
Confidence            57999999999999999999865 457889999876431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFD  304 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~  304 (362)
                                     .........+.+|+++++.++|||++++++.+...+..+++|||+++++|..++..    ...++
T Consensus        40 ---------------~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  104 (267)
T cd08224          40 ---------------MMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIP  104 (267)
T ss_pred             ---------------ccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcC
Confidence                           11122345688999999999999999999999999999999999999999998864    23489


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus       105 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224         105 ERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            99999999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.91  E-value=2.1e-23  Score=189.62  Aligned_cols=152  Identities=22%  Similarity=0.358  Sum_probs=126.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|++.+.||+|+||.||++....    ..+..+|+|.+....                                    
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------------------------------   48 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA------------------------------------   48 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC------------------------------------
Confidence            4679999999999999999986432    234578888764321                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            .......+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++.+.+  
T Consensus        49 ----------------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~  106 (288)
T cd05061          49 ----------------------SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE  106 (288)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccc
Confidence                                  11122346789999999999999999999999999999999999999999997532  


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 --------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 --------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                              .++...+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~  170 (288)
T cd05061         107 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY  170 (288)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccc
Confidence                    24567888999999999999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.91  E-value=1.7e-23  Score=191.01  Aligned_cols=108  Identities=25%  Similarity=0.382  Sum_probs=98.5

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-----------CCCHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-----------NFDDATTRFYTACVVEA  318 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~ql~~a  318 (362)
                      ...+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++....           .++...+..++.|++.|
T Consensus        63 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a  142 (296)
T cd05095          63 RNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG  142 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999999999999987632           25677899999999999


Q ss_pred             HHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       319 l~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05095         143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             HHHHHHCCeecccCChheEEEcCCCCEEeccCccccccc
Confidence            999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=2.7e-23  Score=188.34  Aligned_cols=148  Identities=30%  Similarity=0.401  Sum_probs=125.0

Q ss_pred             cEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        151 LRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      |++++.||+|+||.||++...   ...+..+|+|.+....                                        
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----------------------------------------   45 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC----------------------------------------   45 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc----------------------------------------
Confidence            388999999999999886532   2356789999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .......+.+|+++++.++||||+++++++..  ...+|++|||+++++|.+++.. ..+++
T Consensus        46 ------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~  106 (283)
T cd05080          46 ------------------GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-HKLNL  106 (283)
T ss_pred             ------------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-cCCCH
Confidence                              01123457789999999999999999998754  3468999999999999999876 45999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080         107 AQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence            9999999999999999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.90  E-value=4.5e-23  Score=183.92  Aligned_cols=150  Identities=27%  Similarity=0.482  Sum_probs=130.4

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||++.+. .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~-~~~~~~~iK~~~~~~------------------------------------------   37 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHV-NSDQKYAMKEIRLPK------------------------------------------   37 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEc-CCCceEEEEEEEcCc------------------------------------------
Confidence            5889999999999999999865 457789999875321                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                      .......+..|+.+++.++||||+++++.+.+.+.+|++|||+++++|.+++...  ..+++..
T Consensus        38 ----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  101 (255)
T cd08219          38 ----------------SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDT  101 (255)
T ss_pred             ----------------chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHH
Confidence                            1122345678999999999999999999999999999999999999999988653  3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.++.+..
T Consensus       102 ~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219         102 ILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            999999999999999999999999999999999999999999999986643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=2.4e-23  Score=188.16  Aligned_cols=152  Identities=23%  Similarity=0.386  Sum_probs=127.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|++...+|.|+||.||.+...+    ..+..+|+|.+....                                    
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~------------------------------------   48 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA------------------------------------   48 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC------------------------------------
Confidence            4679999999999999999987543    234568888764320                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            .......+.+|+.+++.++||||+++++++..+...++||||+++++|.+++.+..  
T Consensus        49 ----------------------~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  106 (277)
T cd05062          49 ----------------------SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE  106 (277)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCcc
Confidence                                  11123457889999999999999999999999999999999999999999987532  


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 --------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 --------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                              .++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  170 (277)
T cd05062         107 MENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  170 (277)
T ss_pred             ccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccC
Confidence                    24677889999999999999999999999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.90  E-value=2.9e-23  Score=187.91  Aligned_cols=147  Identities=30%  Similarity=0.415  Sum_probs=127.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.+|+|.+....                                         
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~aiK~~~~~~-----------------------------------------   38 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHL-LTRRILAVKVIPLDI-----------------------------------------   38 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEc-CCCcEEEEEEEecCC-----------------------------------------
Confidence            36788999999999999999855 457889999875420                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       .......+.+|+.+++.++||||+++++.+...+..+++|||+++++|..+    ..+++..+
T Consensus        39 -----------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~   97 (279)
T cd06619          39 -----------------TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVL   97 (279)
T ss_pred             -----------------ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHH
Confidence                             112234578899999999999999999999999999999999999998654    35789999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..+..
T Consensus        98 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          98 GRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             HHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            99999999999999999999999999999999999999999999976543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.4e-23  Score=185.22  Aligned_cols=149  Identities=28%  Similarity=0.460  Sum_probs=132.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.+|.|+||.||.+... .+++.+++|.+....                                         
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   40 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDI-ATGELVAIKVIKLEP-----------------------------------------   40 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEec-CCCCEEEEEEEEcCc-----------------------------------------
Confidence            57899999999999999999865 346789999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~  307 (362)
                                        ......+.+|+.+++.++||||+++++.+...+.+|++|||+++++|.+++... ..+++..
T Consensus        41 ------------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~  102 (262)
T cd06613          41 ------------------GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQ  102 (262)
T ss_pred             ------------------hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHH
Confidence                              113356788999999999999999999999999999999999999999998775 6799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++..+.
T Consensus       103 ~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613         103 IAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhh
Confidence            99999999999999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.90  E-value=2.6e-23  Score=189.14  Aligned_cols=153  Identities=31%  Similarity=0.624  Sum_probs=132.4

Q ss_pred             CcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +|++.+.||.|+||.||.+....  .+++.+|+|.+.+...                                       
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---------------------------------------   41 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---------------------------------------   41 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---------------------------------------
Confidence            47889999999999999998643  3578899998865311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                      .........+..|+.++..+ +||||+++++++..+..+|+||||+++++|.+++.....+++.
T Consensus        42 ----------------~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  105 (290)
T cd05613          42 ----------------VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQ  105 (290)
T ss_pred             ----------------hhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHH
Confidence                            11122345577899999999 6999999999999999999999999999999999887789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613         106 EVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence            999999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.90  E-value=3.2e-23  Score=187.52  Aligned_cols=152  Identities=20%  Similarity=0.369  Sum_probs=127.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCC---ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSR---SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ...+|++++.||+|+||.||++.+..+...   .+|+|.+....                                    
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~------------------------------------   48 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT------------------------------------   48 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC------------------------------------
Confidence            457899999999999999999986543221   47888775321                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                            .......+.+|+.+++.++||||+++++++.. ...+++|+++++|+|.+++..+ +.
T Consensus        49 ----------------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~  105 (279)
T cd05109          49 ----------------------SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDR  105 (279)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCC
Confidence                                  11223457789999999999999999998865 4578999999999999998764 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.+.
T Consensus       106 ~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109         106 IGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            8999999999999999999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.90  E-value=1.7e-23  Score=188.26  Aligned_cols=107  Identities=21%  Similarity=0.245  Sum_probs=97.1

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-----NFDDATTRFYTACVVEAFDYLHS  324 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~ql~~al~~lH~  324 (362)
                      ...+.+|+.+++.++||||+++++.+.....+|++|||+++++|.+++....     ..++..+..++.|++.||.|||+
T Consensus        39 ~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  118 (269)
T cd05042          39 QLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ  118 (269)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            3457889999999999999999999999999999999999999999987643     24677889999999999999999


Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++|+||||||+||+++.++.+||+|||+++..
T Consensus       119 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042         119 ADFIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             cCEecccccHhheEecCCCcEEEecccccccc
Confidence            99999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=1.7e-23  Score=189.59  Aligned_cols=152  Identities=28%  Similarity=0.434  Sum_probs=129.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCC----CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDP----SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      .+++|++.+.||+|+||.||.+......    ...+++|.+...                                    
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~------------------------------------   46 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN------------------------------------   46 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC------------------------------------
Confidence            4568899999999999999999865432    246788876432                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                            ........+.+|+.++..++||||+++++++......|++|||+++++|.+++...  
T Consensus        47 ----------------------~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~  104 (283)
T cd05048          47 ----------------------AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSP  104 (283)
T ss_pred             ----------------------CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCC
Confidence                                  11123355788999999999999999999999889999999999999999998764  


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 --------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 --------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                                    ..++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++..
T Consensus       105 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048         105 HSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             CcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeec
Confidence                          34778899999999999999999999999999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.1e-23  Score=191.06  Aligned_cols=151  Identities=37%  Similarity=0.718  Sum_probs=132.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|++.+.||.|+||.||++... .+++.+++|.+.+...                                        
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   39 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLK-GTGKLFALKVLDKKEM----------------------------------------   39 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEc-CCCcEEEEEEEecccc----------------------------------------
Confidence            36899999999999999999865 4578899998865411                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~  306 (362)
                                      ........+..|+++++.++||||+++++.+......|++|||+.+++|.+++...  ..+++.
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~  103 (316)
T cd05574          40 ----------------IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEE  103 (316)
T ss_pred             ----------------chHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHH
Confidence                            11123456788999999999999999999999999999999999999999998754  468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++...
T Consensus       104 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574         104 VARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence            99999999999999999999999999999999999999999999998765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=2.8e-23  Score=185.94  Aligned_cols=150  Identities=27%  Similarity=0.439  Sum_probs=130.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.+|+|+||.||++...  .+..+++|.+....                                       
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~v~iK~~~~~~---------------------------------------   42 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN--NSTKVAVKTLKPGT---------------------------------------   42 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec--CCceEEEEEccCCc---------------------------------------
Confidence            4578999999999999999999854  24568999765321                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           ...+.+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++...  ..++
T Consensus        43 ---------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  101 (261)
T cd05072          43 ---------------------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVL  101 (261)
T ss_pred             ---------------------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCC
Confidence                                 11245788999999999999999999999999999999999999999998753  4578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ...+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||+++.+..
T Consensus       102 ~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072         102 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence            889999999999999999999999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.90  E-value=4.5e-23  Score=183.94  Aligned_cols=151  Identities=26%  Similarity=0.463  Sum_probs=131.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.+|.|+||.|+.+... .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~-~~~~~~~~k~~~~~~------------------------------------------   37 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRT-EDDSLVVWKEVNLTR------------------------------------------   37 (256)
T ss_pred             CceEeeEecccCCceEEEEEEc-CCCcEEEEEEEeecc------------------------------------------
Confidence            5889999999999999999855 457789999875321                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                     ........+.+|+.+++.++||||+++++++.+.+.++++|||+++++|.+++.+.  ..+++..
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08221          38 ---------------LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEM  102 (256)
T ss_pred             ---------------cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHH
Confidence                           11223355788999999999999999999999999999999999999999999764  3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||+++....
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~  153 (256)
T cd08221         103 VLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS  153 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence            999999999999999999999999999999999999999999999986633

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.90  E-value=2.4e-23  Score=195.74  Aligned_cols=150  Identities=24%  Similarity=0.360  Sum_probs=125.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||.+.+. ..++.+|+|.+.+..                                       
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   61 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPF---------------------------------------   61 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEEC-CCCcEEEEEEeCccc---------------------------------------
Confidence            3678999999999999999999854 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ..+|+||||++ ++|.+.+.. 
T Consensus        62 ------------------~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-  121 (364)
T cd07875          62 ------------------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-  121 (364)
T ss_pred             ------------------cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh-
Confidence                              1122334577899999999999999999987543      35899999994 577777753 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       .++...+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       122 -~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             -cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence             48889999999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.90  E-value=2.8e-23  Score=189.62  Aligned_cols=153  Identities=26%  Similarity=0.399  Sum_probs=131.7

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+++.||.|+||.||++.... +++.+++|.+......                                        
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~v~iK~~~~~~~~----------------------------------------   39 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE-TGRIVAIKKIKLGERK----------------------------------------   39 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC-CCcEEEEEEEeccccc----------------------------------------
Confidence            47889999999999999998553 4778999998654210                                        


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~  308 (362)
                                    .........+..|+.+++.++||||+++++++.+.+..|+||||+ +++|.+++.... .+++..+
T Consensus        40 --------------~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~  104 (298)
T cd07841          40 --------------EAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADI  104 (298)
T ss_pred             --------------cccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHH
Confidence                          001122345678999999999999999999999999999999999 999999998765 7999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       105 ~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841         105 KSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            99999999999999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=2.5e-23  Score=186.61  Aligned_cols=151  Identities=25%  Similarity=0.390  Sum_probs=131.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.+|+|+||.||++... ..++.+++|.+.+..                                        
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~K~~~~~~----------------------------------------   43 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDT----------------------------------------   43 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEe-cCCceEEEEEecCCc----------------------------------------
Confidence            456889999999999999999865 457789999875321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                          .....+.+|+.+++.++||||+++++++...+.++++|||+++++|.+++...  ..+++
T Consensus        44 --------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~  103 (263)
T cd05052          44 --------------------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA  103 (263)
T ss_pred             --------------------hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCH
Confidence                                12245788999999999999999999999999999999999999999998753  35889


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...++
T Consensus       104 ~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~  157 (263)
T cd05052         104 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  157 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence            999999999999999999999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.90  E-value=3e-23  Score=187.20  Aligned_cols=151  Identities=25%  Similarity=0.330  Sum_probs=129.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ++|+++..+|.|+||.||++.....    ..+.+++|.+...                                      
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--------------------------------------   46 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT--------------------------------------   46 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc--------------------------------------
Confidence            6788999999999999999986432    2356777765332                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC---
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG---  301 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---  301 (362)
                                          ........+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++....   
T Consensus        47 --------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~  106 (275)
T cd05046          47 --------------------KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKD  106 (275)
T ss_pred             --------------------cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhccccc
Confidence                                011234568889999999999999999999999899999999999999999998655   


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                            .+++..+..++.|++.||.|||+++|+||||||+||+++.++.++++|||+++...
T Consensus       107 ~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~  168 (275)
T cd05046         107 EKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVY  168 (275)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccC
Confidence                  68999999999999999999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.90  E-value=2.6e-23  Score=190.85  Aligned_cols=152  Identities=26%  Similarity=0.391  Sum_probs=128.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC------CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD------PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      .++|.+.+.||+|+||.||++...+.      ....+|+|.+.+.                                   
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-----------------------------------   61 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-----------------------------------   61 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-----------------------------------
Confidence            46799999999999999999985431      2245888877532                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             ........+..|+++++.+ +||||+++++++...+..|++|||+++++|.+++...
T Consensus        62 -----------------------~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          62 -----------------------ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             -----------------------CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence                                   0112235578899999999 7999999999999999999999999999999999753


Q ss_pred             C----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 G----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +                .++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       119 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         119 RPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH  191 (307)
T ss_pred             CCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccc
Confidence            2                37888999999999999999999999999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0193|consensus

Probab=99.90  E-value=3.2e-24  Score=200.37  Aligned_cols=146  Identities=28%  Similarity=0.413  Sum_probs=130.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++..+...||+|.||+||++.+.|+    ||||+++-.+                                       
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~whGd----VAVK~Lnv~~---------------------------------------  426 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWHGD----VAVKLLNVDD---------------------------------------  426 (678)
T ss_pred             CHHHhhccceeccccccceeecccccc----eEEEEEecCC---------------------------------------
Confidence            456778889999999999999999875    8999986542                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                        ......+.|..|+..+++-+|.||+=+.+++..+.. .||+.+|+|.+|+.+++-. ..|..
T Consensus       427 ------------------pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm  487 (678)
T KOG0193|consen  427 ------------------PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDM  487 (678)
T ss_pred             ------------------CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhH
Confidence                              122367889999999999999999999999987776 9999999999999999753 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ...+.|+.|++.|+.|||.++|||||||..||++.+++.|||+|||++.
T Consensus       488 ~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  488 NTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccccee
Confidence            9999999999999999999999999999999999999999999999985

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2.2e-23  Score=195.44  Aligned_cols=141  Identities=23%  Similarity=0.325  Sum_probs=124.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+++.||+|+||.||++... ..++.+|+|...+.                                         
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~valK~~~~~-----------------------------------------  102 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKP-GQPDPVVLKIGQKG-----------------------------------------  102 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEEC-CCCceEEEEeCCcc-----------------------------------------
Confidence            357999999999999999999865 45778999864321                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~  306 (362)
                                              ....|+.+++.++||||+++++++......++|||++ .++|.+++.. ...+++.
T Consensus       103 ------------------------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~  157 (357)
T PHA03209        103 ------------------------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SSDLYTYLTKRSRPLPID  157 (357)
T ss_pred             ------------------------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-CCcHHHHHHhccCCCCHH
Confidence                                    1245889999999999999999999999999999999 5688887765 3568999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.
T Consensus       158 ~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        158 QALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccc
Confidence            9999999999999999999999999999999999999999999999974

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.90  E-value=1.1e-23  Score=189.03  Aligned_cols=152  Identities=24%  Similarity=0.449  Sum_probs=131.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||.|+||.||++... .+++.+++|.+...+                                        
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~~~~vK~~~~~~----------------------------------------   39 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCL-LDGVPVALKKVQIFD----------------------------------------   39 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeec-CCCceEEEEeeeehh----------------------------------------
Confidence            357888999999999999999854 347789999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l  303 (362)
                                      .........+.+|+.+++.++||||+++++++..++..+++|||+++++|.+++..    ...+
T Consensus        40 ----------------~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~  103 (267)
T cd08229          40 ----------------LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI  103 (267)
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCC
Confidence                            11222345678899999999999999999999999999999999999999998864    2458


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+
T Consensus       104 ~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229         104 PEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            99999999999999999999999999999999999999999999999988755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.90  E-value=3e-23  Score=188.93  Aligned_cols=154  Identities=25%  Similarity=0.419  Sum_probs=130.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++....    .....+++|.+....                                   
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-----------------------------------   54 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-----------------------------------   54 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-----------------------------------
Confidence            34678999999999999999998653    223568888765320                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                             .......+.+|+.++..+ +||||+++++++...+.+|++|||+++++|.+++... 
T Consensus        55 -----------------------~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~  111 (293)
T cd05053          55 -----------------------TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARR  111 (293)
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcC
Confidence                                   112234578899999999 8999999999999999999999999999999998642 


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 ---------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ---------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                     ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||+++.+..
T Consensus       112 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         112 PPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHH  184 (293)
T ss_pred             CCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCcccccccccc
Confidence                           3478899999999999999999999999999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.90  E-value=2.5e-23  Score=190.68  Aligned_cols=153  Identities=26%  Similarity=0.403  Sum_probs=128.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecC------CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG------DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      ...+|.+...||+|+||.||.+....      ..+..+++|.+...                                  
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~----------------------------------   58 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD----------------------------------   58 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc----------------------------------
Confidence            45778999999999999999997532      12346888876432                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              ........+.+|+.+++.+ +||||+++++++...+..|++|||+++++|.+++.+
T Consensus        59 ------------------------~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  114 (304)
T cd05101          59 ------------------------ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA  114 (304)
T ss_pred             ------------------------cchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHh
Confidence                                    1122345678899999999 899999999999999999999999999999999876


Q ss_pred             cC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KG----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..                .++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~  188 (304)
T cd05101         115 RRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVN  188 (304)
T ss_pred             cCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecc
Confidence            32                36778889999999999999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.90  E-value=3.9e-23  Score=187.36  Aligned_cols=149  Identities=26%  Similarity=0.396  Sum_probs=127.5

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.||+|+||.||++... .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~------------------------------------------   37 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNK-KTGQIVAMKKIRLES------------------------------------------   37 (285)
T ss_pred             CceEeeEecccCceEEEEEEEC-CCCcEEEEEEecccc------------------------------------------
Confidence            5889999999999999999854 457889999875421                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---CCCCHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---GNFDDA  306 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~  306 (362)
                                     ........+.+|+.+++.++||||+++++++..++.+|+||||++ ++|.+++...   ..+++.
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~  101 (285)
T cd07861          38 ---------------EEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAE  101 (285)
T ss_pred             ---------------ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHH
Confidence                           011123456789999999999999999999999999999999996 6888887642   458999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861         102 LVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            999999999999999999999999999999999999999999999987553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0666|consensus

Probab=99.90  E-value=2.8e-24  Score=186.08  Aligned_cols=154  Identities=25%  Similarity=0.437  Sum_probs=128.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCC---CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPS---RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      +..|+.+..||+|+||.||++...+.+.   +.+|||.++...-                                    
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd------------------------------------   66 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD------------------------------------   66 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC------------------------------------
Confidence            5678999999999999999996544322   3789998754310                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc---
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK---  300 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~---  300 (362)
                                           ....-....+|+.+++.++|||++.+..+|.. +..+|+++||. ..+|.++|+-.   
T Consensus        67 ---------------------~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYA-EhDL~~II~fHr~~  124 (438)
T KOG0666|consen   67 ---------------------GTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYA-EHDLWHIIKFHRAS  124 (438)
T ss_pred             ---------------------CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhh-hhhHHHHHHHhccc
Confidence                                 01112346789999999999999999999877 77899999998 67999998743   


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC----CcEEEEecccceecCCC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~~~~~~  359 (362)
                        +.++...++.++.||+.|+.|||++=|+||||||.|||+..+    |.|||+|||+||.+.+|
T Consensus       125 ~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~p  189 (438)
T KOG0666|consen  125 KAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNP  189 (438)
T ss_pred             hhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcc
Confidence              348999999999999999999999999999999999999876    89999999999988665

>KOG0696|consensus

Probab=99.90  E-value=2.2e-24  Score=193.10  Aligned_cols=156  Identities=32%  Similarity=0.595  Sum_probs=136.3

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      +.+...+|..+.+||+|+||.|.++.+. .+.+.+|||++++.-+...+                               
T Consensus       344 d~i~~tDFnFl~VlGKGSFGKVlLaerk-gtdELyAiKiLkKDViiQdD-------------------------------  391 (683)
T KOG0696|consen  344 DRIKATDFNFLMVLGKGSFGKVLLAERK-GTDELYAIKILKKDVIIQDD-------------------------------  391 (683)
T ss_pred             cceeecccceEEEeccCccceeeeeccc-CcchhhhhhhhccceeeecC-------------------------------
Confidence            4557789999999999999999999955 46788999999886332221                               


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                               ..+--+.|..+|+.. +.|.+++++.+|+..+.+|+||||+.||+|.-.++.-+.
T Consensus       392 -------------------------Dvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk  446 (683)
T KOG0696|consen  392 -------------------------DVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK  446 (683)
T ss_pred             -------------------------cccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc
Confidence                                     112235677888877 578999999999999999999999999999999998899


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.+..+.+++..|+-||-|||++|||+||||.+|+|++.+|++||+|||+++.-
T Consensus       447 FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  447 FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence            999999999999999999999999999999999999999999999999999864

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.4e-23  Score=192.35  Aligned_cols=147  Identities=20%  Similarity=0.165  Sum_probs=114.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+...||+|+||.||++.+...+++.+|+|.+.....                                      
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~--------------------------------------   57 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVP--------------------------------------   57 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccc--------------------------------------
Confidence            457899999999999999999987655677789987642100                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceee-eeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK-LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                      ..........+.+|+.+|+.++|+|++. ++..    +..|+||||++|++|... .   ... 
T Consensus        58 ----------------~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~---~~~-  112 (365)
T PRK09188         58 ----------------WWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHLA-R---PHG-  112 (365)
T ss_pred             ----------------ccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHHh-C---ccc-
Confidence                            0001123456889999999999999885 4442    358999999999999632 1   111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecC-CCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDL-KPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDi-kp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                        ...++.|++.+|.|||++||+|||| ||+|||++.++.++|+|||+|+.+..
T Consensus       113 --~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188        113 --DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             --hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence              1467889999999999999999999 99999999999999999999997643

>PHA02988 hypothetical protein; Provisional

Probab=99.90  E-value=1.8e-23  Score=189.74  Aligned_cols=145  Identities=16%  Similarity=0.180  Sum_probs=124.7

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      ..+++|++|.||++...   ++.+|+|.+.+..                                               
T Consensus        26 ~~i~~g~~~~v~~~~~~---~~~vavK~~~~~~-----------------------------------------------   55 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN---NKEVIIRTFKKFH-----------------------------------------------   55 (283)
T ss_pred             eEEeeCCceEEEEEEEC---CEEEEEEeccccc-----------------------------------------------
Confidence            46899999999999863   6789999886531                                               


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCCCHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNFDDATTRF  310 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  310 (362)
                               .......+.+.+|+.+|++++||||+++++++.+    ...++++|||+++|+|.+++.+.+.++......
T Consensus        56 ---------~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~  126 (283)
T PHA02988         56 ---------KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLD  126 (283)
T ss_pred             ---------cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHH
Confidence                     1112223567899999999999999999998866    457899999999999999998877899999999


Q ss_pred             HHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        311 YTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       311 ~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.+..
T Consensus       127 i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~  175 (283)
T PHA02988        127 MAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS  175 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence            99999999999998 5999999999999999999999999999986543

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=2e-23  Score=190.46  Aligned_cols=151  Identities=26%  Similarity=0.402  Sum_probs=126.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC-------------CCCceeeeeeccccccccccccccceeeeCCCCceEEEeeh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD-------------PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQ  214 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~-------------~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~  214 (362)
                      ..+|++.+.||+|+||.||++...+.             ....+|+|.+.+.                            
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~----------------------------   55 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD----------------------------   55 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC----------------------------
Confidence            35899999999999999999875421             1123667665432                            


Q ss_pred             hhHHhhccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchH
Q psy14740        215 ETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW  294 (362)
Q Consensus       215 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  294 (362)
                                                    ........+.+|+++++.++|||++++++++...+..+++|||+++++|.
T Consensus        56 ------------------------------~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  105 (295)
T cd05097          56 ------------------------------VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN  105 (295)
T ss_pred             ------------------------------CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHH
Confidence                                          11123345889999999999999999999999999999999999999999


Q ss_pred             HHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        295 TILRDKG------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       295 ~~l~~~~------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++....            .++...+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||+++.+
T Consensus       106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~  179 (295)
T cd05097         106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNL  179 (295)
T ss_pred             HHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEeccccccccc
Confidence            9886431            3678888999999999999999999999999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.90  E-value=3.2e-23  Score=188.09  Aligned_cols=149  Identities=28%  Similarity=0.405  Sum_probs=127.2

Q ss_pred             cEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        151 LRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      |++++.||+|+||.||++...   ..++..+++|.+....                                        
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~----------------------------------------   45 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES----------------------------------------   45 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc----------------------------------------
Confidence            578899999999999999743   3456789999875321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                        .......+.+|+.+++.++||||+++++++...  ..++++|||+++++|.+++.+.. .++
T Consensus        46 ------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~  107 (284)
T cd05079          46 ------------------GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKIN  107 (284)
T ss_pred             ------------------cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCC
Confidence                              112234578999999999999999999988765  57899999999999999987643 589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|+|++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       108 ~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079         108 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence            99999999999999999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.90  E-value=4.5e-23  Score=188.40  Aligned_cols=149  Identities=28%  Similarity=0.438  Sum_probs=131.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.||+|+||.||++... .+++.+++|.+....                                        
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   56 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDI-ATGQEVAIKQMNLQQ----------------------------------------   56 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEEC-CCCCEEEEEEEecCc----------------------------------------
Confidence            478999999999999999999854 457889999875321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++.+..++..|+||||+++++|.+++.+ ..+++..
T Consensus        57 -------------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~  116 (297)
T cd06656          57 -------------------QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQ  116 (297)
T ss_pred             -------------------cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHH
Confidence                               11224477899999999999999999999999999999999999999999865 4689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus       117 ~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~  166 (297)
T cd06656         117 IAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (297)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence            99999999999999999999999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.4e-23  Score=186.37  Aligned_cols=151  Identities=25%  Similarity=0.320  Sum_probs=125.7

Q ss_pred             cEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      |++.+.+|+|+||.||.+....+  .+..+|+|.+....                                         
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-----------------------------------------   39 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-----------------------------------------   39 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-----------------------------------------
Confidence            46778899999999999986543  34679999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------eEEEEEeccCCcchHHHHHhc--
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                      ........+.+|+.+++.++||||+++++++....      ..+++|||+++++|..++...  
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~  103 (273)
T cd05035          40 ----------------HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRL  103 (273)
T ss_pred             ----------------CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhc
Confidence                            11223456889999999999999999999875544      389999999999999988542  


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 ----GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ----~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                          ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.+..
T Consensus       104 ~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05035         104 GGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYS  165 (273)
T ss_pred             cCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccc
Confidence                2588999999999999999999999999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.90  E-value=4e-23  Score=187.64  Aligned_cols=149  Identities=26%  Similarity=0.394  Sum_probs=121.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||+|+||.||++.+. .+++.+|+|.+.....                                         
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~-~~~~~~aiK~~~~~~~-----------------------------------------   38 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVQTN-----------------------------------------   38 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEEC-CCCcEEEEEEeccCcC-----------------------------------------
Confidence            4889999999999999999855 5688999998754210                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeeec-----cceEEEEEeccCCcchHHHHHhc-
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFKD-----KKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                      .........+|+.+++.+   +||||+++++++..     ...++++||+++ ++|.+++... 
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~  101 (288)
T cd07863          39 ----------------EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVP  101 (288)
T ss_pred             ----------------CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcC
Confidence                            011112345566666654   79999999998754     346899999995 5888888753 


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       ..+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863         102 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence             348999999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.90  E-value=2.3e-23  Score=197.53  Aligned_cols=152  Identities=28%  Similarity=0.435  Sum_probs=127.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++.+.+    ..+..+|+|.+....                                   
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-----------------------------------   79 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-----------------------------------   79 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-----------------------------------
Confidence            34567788999999999999998643    234579999885431                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             .....+.+.+|+.++..+. ||||+++++++..++..++||||+++|+|.+++..++
T Consensus        80 -----------------------~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~  136 (401)
T cd05107          80 -----------------------RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNK  136 (401)
T ss_pred             -----------------------ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhcc
Confidence                                   1112245789999999997 9999999999999999999999999999999986431


Q ss_pred             --------------------------------------------------------------------------------
Q psy14740        302 --------------------------------------------------------------------------------  301 (362)
Q Consensus       302 --------------------------------------------------------------------------------  301 (362)
                                                                                                      
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (401)
T cd05107         137 HTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQY  216 (401)
T ss_pred             ccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhh
Confidence                                                                                            


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 ------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 ------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                                        .++...+..++.|++.||.|||+.+++||||||+|||++.++.++|+|||+++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~  289 (401)
T cd05107         217 LPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI  289 (401)
T ss_pred             hcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceec
Confidence                              2466678889999999999999999999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.90  E-value=1.4e-23  Score=187.82  Aligned_cols=150  Identities=24%  Similarity=0.315  Sum_probs=131.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -.+|++.+.||.|+||.||++....  +..+++|.+....                                        
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~~k~~~~~~----------------------------------------   42 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN--RVRVAIKILKSDD----------------------------------------   42 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC--CCcEEEEeccccc----------------------------------------
Confidence            3568889999999999999998654  7789999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                         ......+..|+.+++.++||||+++++++...+.++++|||+++++|.+++.+.  ..++.
T Consensus        43 -------------------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  103 (261)
T cd05148          43 -------------------LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPV  103 (261)
T ss_pred             -------------------hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCH
Confidence                               112345778999999999999999999999999999999999999999999753  35899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+..+..
T Consensus       104 ~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~  156 (261)
T cd05148         104 ASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE  156 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence            99999999999999999999999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=3.3e-23  Score=185.97  Aligned_cols=157  Identities=27%  Similarity=0.424  Sum_probs=133.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+...||.|+||.||.+... ..++.+++|.+.........                                     
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~-~~~~~~~~k~~~~~~~~~~~-------------------------------------   42 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNA-SSGELMAVKQVELPSVSASS-------------------------------------   42 (267)
T ss_pred             CccccceeecCCCeEEEEEEec-CCCcEEEEEEecCCCcccch-------------------------------------
Confidence            4677889999999999999855 34778999987653110000                                     


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   ..........+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++...+.+++..+.
T Consensus        43 -------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  109 (267)
T cd06628          43 -------------KDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR  109 (267)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHH
Confidence                         0011223356788999999999999999999999999999999999999999999887789999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.|++.||.|||++|++|+||+|+||+++.++.++|+|||+++.+.
T Consensus       110 ~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628         110 NFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            999999999999999999999999999999999999999999988765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0986|consensus

Probab=99.90  E-value=6.1e-24  Score=192.28  Aligned_cols=159  Identities=33%  Similarity=0.598  Sum_probs=138.2

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .....+.|+.-.+||.|+||+|+-++ ..++++-||.|.+.|....                                  
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acq-vraTGKMYAcKkL~KKRiK----------------------------------  224 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQ-VRATGKMYACKKLDKKRIK----------------------------------  224 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEE-EecchhhHHHHHHHHHHHH----------------------------------
Confidence            34567889999999999999999988 5578999999988775221                                  


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            ...-..-.+.|..+|.+++.|.||.+-..|+..+.+++||..+.||+|.-.|-+.+  
T Consensus       225 ----------------------kr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~  282 (591)
T KOG0986|consen  225 ----------------------KRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNP  282 (591)
T ss_pred             ----------------------HhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCC
Confidence                                  11122346789999999999999999999999999999999999999987666544  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .|++..+++++.+|+.||++||+.+|++||+||+|||+|+.|++.|+|+|+|..+..+
T Consensus       283 gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  283 GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            6999999999999999999999999999999999999999999999999999887654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=3.2e-23  Score=186.10  Aligned_cols=154  Identities=24%  Similarity=0.385  Sum_probs=131.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.+|+|+||.||.+... .+++.+++|.+......                                        
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~alk~~~~~~~~----------------------------------------   39 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDV-KTGTLMAVKQVTYVRNT----------------------------------------   39 (268)
T ss_pred             CccccceecCcCceEEEEEEEc-CCCcEEEEEEeecccCC----------------------------------------
Confidence            4777889999999999999854 55788999987543100                                        


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   ..........+.+|+.+++.++||||+++++++.+++.++++|||+++++|.+++.+.+++++..+.
T Consensus        40 -------------~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~  106 (268)
T cd06630          40 -------------SSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVII  106 (268)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHH
Confidence                         0011123466889999999999999999999999999999999999999999999887889999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLI  357 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~  357 (362)
                      .++.|++.||.|||++|++|+||+|+||+++.++ .++|+|||.+..+.
T Consensus       107 ~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630         107 NYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            9999999999999999999999999999998765 59999999987664

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=6.3e-23  Score=186.71  Aligned_cols=149  Identities=25%  Similarity=0.347  Sum_probs=126.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.||+|+||.||.+.... +++.+++|.+....                                        
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~-~~~~~~iK~~~~~~----------------------------------------   42 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRI-NGQLVALKVISMKT----------------------------------------   42 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcC-CCcEEEEEEecccC----------------------------------------
Confidence            4789999999999999999998553 47789999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~  306 (362)
                                        .......+.+|+.+++.++||||+++++++..++..|++|||+. +++.+++.. ...+++.
T Consensus        43 ------------------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~  103 (291)
T cd07870          43 ------------------EEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPY  103 (291)
T ss_pred             ------------------cCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHH
Confidence                              01112345689999999999999999999999999999999995 677766654 3457888


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++..
T Consensus       104 ~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870         104 NVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            99999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.90  E-value=1.2e-23  Score=178.85  Aligned_cols=168  Identities=15%  Similarity=0.063  Sum_probs=113.3

Q ss_pred             EEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        154 ITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       154 ~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      ...||+|+||.||.+...  +++.+|+|+++++.....+...   ....           ...|.+.             
T Consensus         2 ~~~ig~G~~~~Vy~a~~~--~g~~vAvKv~~~~~~~~~~~~~---~~~~-----------~~~~~~~-------------   52 (190)
T cd05147           2 NGCISTGKEANVYHATTA--NGEERAIKIYKTSILVFKDRDR---YVSG-----------EFRFRHG-------------   52 (190)
T ss_pred             CCccccccceEEEEEECC--CCCEEEEEEEEecccccccHHH---hhcC-----------Cchhhcc-------------
Confidence            357999999999999864  5889999999764210000000   0000           0000000             


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                            ................|+.++..+.++++.........  ..++||||++|+++........+++...+..++.
T Consensus        53 ------~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~  124 (190)
T cd05147          53 ------YCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYL  124 (190)
T ss_pred             ------ccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHH
Confidence                  00000001112234579999999987776544333222  2389999998877765544456799999999999


Q ss_pred             HHHHHHHHH-HHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        314 CVVEAFDYL-HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       314 ql~~al~~l-H~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      |++.+|.++ |+.||+||||||+|||++ ++.++|+|||+|.....|
T Consensus       125 qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~~~  170 (190)
T cd05147         125 QVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHDHP  170 (190)
T ss_pred             HHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence            999999999 799999999999999998 578999999999866544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1035|consensus

Probab=99.90  E-value=2.4e-24  Score=214.70  Aligned_cols=149  Identities=30%  Similarity=0.505  Sum_probs=127.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +.+|..+..||+|+||.||++++.-| |+.||||.+.-.                                         
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlD-Gr~YAIKKIpl~-----------------------------------------  515 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLD-GREYAIKKIPLK-----------------------------------------  515 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeeccc-chhhhhhhccCc-----------------------------------------
Confidence            35677788999999999999997654 889999988532                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------------------------------
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------------------------------  277 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------------------------------  277 (362)
                                       .+......+.+|+.++++++|||||++|..|..                              
T Consensus       516 -----------------~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~  578 (1351)
T KOG1035|consen  516 -----------------ASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDI  578 (1351)
T ss_pred             -----------------hHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCccccee
Confidence                             134455778999999999999999999998722                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy14740        278 --------------------------------------------------------------------------------  277 (362)
Q Consensus       278 --------------------------------------------------------------------------------  277 (362)
                                                                                                      
T Consensus       579 ~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~  658 (1351)
T KOG1035|consen  579 RYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENS  658 (1351)
T ss_pred             eeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCc
Confidence                                                                                            


Q ss_pred             -c--------ceEEEEEeccCCcchHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEE
Q psy14740        278 -K--------KYLYMLMESCLGGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKL  347 (362)
Q Consensus       278 -~--------~~~~lv~e~~~~~~L~~~l~~~~~l-~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl  347 (362)
                       +        ..+||-||||+..++.+++.++... ....++.+++||++||.|+|++|||||||||.||+++.++.|||
T Consensus       659 ~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKI  738 (1351)
T KOG1035|consen  659 SEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKI  738 (1351)
T ss_pred             cccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeee
Confidence             0        2479999999988888888876544 57889999999999999999999999999999999999999999


Q ss_pred             Eeccccee
Q psy14740        348 VDFGFAKK  355 (362)
Q Consensus       348 ~DFG~a~~  355 (362)
                      +|||+|..
T Consensus       739 GDFGLAt~  746 (1351)
T KOG1035|consen  739 GDFGLATD  746 (1351)
T ss_pred             cccccchh
Confidence            99999986

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.90  E-value=7.5e-23  Score=183.23  Aligned_cols=147  Identities=33%  Similarity=0.564  Sum_probs=125.6

Q ss_pred             EEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        152 RVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+.+.||.|.||.||.+.+.   ...+..+++|.++..                                          
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~------------------------------------------   39 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS------------------------------------------   39 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT------------------------------------------
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc------------------------------------------
Confidence            46789999999999999987   233567899887432                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~  306 (362)
                                      ........+.+|++.++.++||||+++++++...+..++||||+++++|.+++...  ..++..
T Consensus        40 ----------------~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~  103 (259)
T PF07714_consen   40 ----------------SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQ  103 (259)
T ss_dssp             ----------------SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHH
T ss_pred             ----------------cccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                            11223567889999999999999999999999888899999999999999999886  569999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ....++.|++.||.|||+++++|+||+|+||+++.++.+||+|||+++..
T Consensus       104 ~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  104 QRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999877

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=4.6e-23  Score=198.13  Aligned_cols=143  Identities=20%  Similarity=0.195  Sum_probs=125.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|.+...||+|+||.||++.+.. .++.+++|....                                          
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-~~~~vavK~~~~------------------------------------------  204 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD-YPQRVVVKAGWY------------------------------------------  204 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC-CCCEEEEecccc------------------------------------------
Confidence            4579999999999999999998654 467889885311                                          


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                             ..+.+|+.+++.++||||+++++++..++..+++|+++ .++|..++... ..+++.
T Consensus       205 -----------------------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~l~~~  260 (461)
T PHA03211        205 -----------------------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSDLYTYLGARLRPLGLA  260 (461)
T ss_pred             -----------------------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCCHHHHHHhcCCCCCHH
Confidence                                   12467999999999999999999999999999999999 57888887654 469999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus       261 ~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        261 QVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence            999999999999999999999999999999999999999999999998653

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.90  E-value=3.6e-23  Score=185.63  Aligned_cols=152  Identities=25%  Similarity=0.419  Sum_probs=131.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||++..  .+++.+|+|.+......                                        
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~--~~~~~~avk~~~~~~~~----------------------------------------   38 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT--NQGQLIAVKQVELDTSN----------------------------------------   38 (265)
T ss_pred             CccccceEeccCCeEEEEEEE--cCCCeEEEEEeecCccc----------------------------------------
Confidence            478889999999999999974  34678999987543100                                        


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   ..........+.+|+++++.++||||+++++++.+.+..|++|||+++++|.+++.+..++++..+.
T Consensus        39 -------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  105 (265)
T cd06631          39 -------------VLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFC  105 (265)
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHH
Confidence                         0011223356889999999999999999999999999999999999999999999887789999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||+++.+
T Consensus       106 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631         106 KYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            99999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.90  E-value=4.8e-23  Score=187.60  Aligned_cols=152  Identities=26%  Similarity=0.404  Sum_probs=128.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ...+|.+...||.|+||.||++....    .+...+++|.+...                                    
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~------------------------------------   46 (291)
T cd05094           3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP------------------------------------   46 (291)
T ss_pred             chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc------------------------------------
Confidence            35678999999999999999998533    22345677765432                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-  301 (362)
                                             .......+.+|+.+++.++||||+++++++...+..++||||+++++|.+++.... 
T Consensus        47 -----------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~  103 (291)
T cd05094          47 -----------------------TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGP  103 (291)
T ss_pred             -----------------------cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCc
Confidence                                   11223457889999999999999999999999999999999999999999997532 


Q ss_pred             ---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ---------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ---------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                     .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~  174 (291)
T cd05094         104 DAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY  174 (291)
T ss_pred             ccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccC
Confidence                           37889999999999999999999999999999999999999999999999997553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.90  E-value=2.6e-23  Score=193.86  Aligned_cols=151  Identities=30%  Similarity=0.432  Sum_probs=125.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|++.+.||.|+||.||++.+.+    .+++.+|+|.+....                                    
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------------------------------   49 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------------------------------   49 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC------------------------------------
Confidence            4579999999999999999997532    346789999875421                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhcC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                            .......+.+|+.++..+ +||||+++++++.. +..++++|||+++++|.+++....
T Consensus        50 ----------------------~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~  107 (343)
T cd05103          50 ----------------------THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKR  107 (343)
T ss_pred             ----------------------ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcC
Confidence                                  112234578899999999 68999999998754 456899999999999999886421


Q ss_pred             -------------------------------------------------------------------CCCHHHHHHHHHH
Q psy14740        302 -------------------------------------------------------------------NFDDATTRFYTAC  314 (362)
Q Consensus       302 -------------------------------------------------------------------~l~~~~~~~~~~q  314 (362)
                                                                                         .++...+..++.|
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  187 (343)
T cd05103         108 GEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQ  187 (343)
T ss_pred             CccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHH
Confidence                                                                               2567788889999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++||+||||||+||+++.++.++|+|||+++.+
T Consensus       188 i~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         188 VAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             HHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence            999999999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=3.3e-23  Score=187.94  Aligned_cols=151  Identities=30%  Similarity=0.481  Sum_probs=131.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. ..++.+|+|.+.+..                                         
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~-~~~~~~~iK~~~~~~-----------------------------------------   38 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHK-ETGQIVAIKKFLESE-----------------------------------------   38 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEEC-CCCCEEEEEeHhhcc-----------------------------------------
Confidence            46889999999999999999865 457889999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+++++.++||||+++++++..++..|++|||+++++|..+......+++..+
T Consensus        39 ----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~  102 (286)
T cd07846          39 ----------------DDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRV  102 (286)
T ss_pred             ----------------CcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHH
Confidence                            0112234577899999999999999999999999999999999999999888776667999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus       103 ~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~  151 (286)
T cd07846         103 RKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  151 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence            9999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.90  E-value=4.8e-23  Score=189.74  Aligned_cols=152  Identities=27%  Similarity=0.409  Sum_probs=127.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecC------CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG------DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      -++|.+.+.||+|+||.||++...+      .....+++|.+...                                   
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~-----------------------------------   55 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN-----------------------------------   55 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC-----------------------------------
Confidence            4678899999999999999997432      23446788876432                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             ........+..|+.+++.+ +||||+++++++...+.+|++|||+++++|.+++...
T Consensus        56 -----------------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          56 -----------------------ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             -----------------------CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence                                   0112234578899999999 6999999999999999999999999999999999653


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 ----------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ----------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                      ..++...+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.+.
T Consensus       113 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         113 RPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH  185 (314)
T ss_pred             CCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccc
Confidence                            237888899999999999999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0607|consensus

Probab=99.90  E-value=5.3e-24  Score=185.01  Aligned_cols=142  Identities=25%  Similarity=0.488  Sum_probs=126.5

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      +.||+|+|+.|--+... .++..||+|++.|.                                                
T Consensus        84 e~LGeGAyasVqtcv~i-~t~~EYAVKiidKq------------------------------------------------  114 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSI-QTGKEYAVKIIDKQ------------------------------------------------  114 (463)
T ss_pred             HHhcCccceeeeeeeee-ccchhhhhhhhhcC------------------------------------------------
Confidence            56999999999988855 46888999998663                                                


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                 ....+.++.+|++++..+ .|+||++++++|+++..+|+|||.+.||+|.+.|.+.+.|++..+..+..
T Consensus       115 -----------~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvk  183 (463)
T KOG0607|consen  115 -----------PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVK  183 (463)
T ss_pred             -----------CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHH
Confidence                       234567899999999998 69999999999999999999999999999999999988999999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceec
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL  356 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~  356 (362)
                      .|+.||.|||.+||.|||+||+|||-...+   -+|||||.++..+
T Consensus       184 dia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  184 DIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             HHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence            999999999999999999999999996543   4899999887543

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.90  E-value=2.3e-23  Score=188.34  Aligned_cols=152  Identities=24%  Similarity=0.352  Sum_probs=130.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ..+|.+.+.+|+|+||.||++....    ..++.+++|.+...                                     
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~-------------------------------------   46 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET-------------------------------------   46 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc-------------------------------------
Confidence            4568888999999999999997542    23567899987542                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                           ........+.+|+++++.++||||+++++++......|++|||+++++|.+++...+  
T Consensus        47 ---------------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~  105 (280)
T cd05049          47 ---------------------ASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPD  105 (280)
T ss_pred             ---------------------CCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCc
Confidence                                 111234568899999999999999999999999999999999999999999987542  


Q ss_pred             ------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                  .+++..+..++.|++.|+.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~  173 (280)
T cd05049         106 AAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVY  173 (280)
T ss_pred             hhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecc
Confidence                        37888999999999999999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.90  E-value=2.7e-23  Score=188.31  Aligned_cols=149  Identities=26%  Similarity=0.462  Sum_probs=127.7

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||.|+||.||++.+. .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~-~~g~~~~~k~~~~~~------------------------------------------   37 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDD------------------------------------------   37 (284)
T ss_pred             CceeEEEecccCCeEEEEEEEC-CCCcEEEEEEeeccc------------------------------------------
Confidence            4788999999999999999865 457889999875421                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~  308 (362)
                                     ........+.+|+.+++.++||||+++++++.+...+|+++||++ ++|.+++.+ .+.+++..+
T Consensus        38 ---------------~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~  101 (284)
T cd07839          38 ---------------DDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIV  101 (284)
T ss_pred             ---------------ccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHH
Confidence                           011122446779999999999999999999999999999999995 578887764 456999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +.++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839         102 KSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            9999999999999999999999999999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=4.2e-23  Score=188.57  Aligned_cols=149  Identities=24%  Similarity=0.415  Sum_probs=125.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCC-CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPS-RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ++|++.+.||+|+||.||++....+.. ..+++|.+...                                         
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-----------------------------------------   40 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-----------------------------------------   40 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-----------------------------------------
Confidence            578999999999999999998654322 34677765421                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-----
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-----  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----  301 (362)
                                       ......+.+.+|+.++.++ +||||+++++++...+.+|++|||+++++|.+++....     
T Consensus        41 -----------------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  103 (297)
T cd05089          41 -----------------ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETD  103 (297)
T ss_pred             -----------------CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccc
Confidence                             1112235578899999998 79999999999999999999999999999999986532     


Q ss_pred             -----------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        302 -----------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       302 -----------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                                 .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++..
T Consensus       104 ~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         104 PAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             cccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence                       378889999999999999999999999999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=4.6e-23  Score=186.10  Aligned_cols=153  Identities=24%  Similarity=0.404  Sum_probs=129.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+...||+|+||.||.+....    ..+..+++|.+....                                   
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-----------------------------------   48 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-----------------------------------   48 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-----------------------------------
Confidence            34678999999999999999988643    234678888864321                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-  301 (362)
                                             .......+.+|+.+++.++||||+++++++......|++|||+++++|.+++.... 
T Consensus        49 -----------------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~  105 (277)
T cd05032          49 -----------------------SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRP  105 (277)
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhccc
Confidence                                   11223457789999999999999999999999999999999999999999986532 


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ---------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ---------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                               .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~  170 (277)
T cd05032         106 EAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY  170 (277)
T ss_pred             chhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhc
Confidence                     36778899999999999999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2e-23  Score=203.77  Aligned_cols=168  Identities=23%  Similarity=0.350  Sum_probs=124.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++++.||+|+||.||++......+...+.|.+.....-   ....                           ...+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~---~~~~---------------------------~~~~  196 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQG---KPKC---------------------------ERLI  196 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhcccccccc---chhh---------------------------hhhH
Confidence            578999999999999999998765444444444422211000   0000                           0000


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-----CC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-----GN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~  302 (362)
                           .+.       ..........+.+|+.+|+.++||||+++++++...+..|++++++ +++|..++...     ..
T Consensus       197 -----~k~-------~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~  263 (501)
T PHA03210        197 -----AKR-------VKAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDR  263 (501)
T ss_pred             -----hHH-------hhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhcccccccc
Confidence                 000       0111223456889999999999999999999999999999999998 66777776542     12


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .....++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCc
Confidence            34567888999999999999999999999999999999999999999999987643

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=5.5e-23  Score=208.11  Aligned_cols=154  Identities=31%  Similarity=0.507  Sum_probs=128.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.++..||.|+||.||++.+. ..++.+++|.+....                                      
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk-~tg~~vAlKvIk~~~--------------------------------------   50 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHK-RTQEFFCWKAISYRG--------------------------------------   50 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEEC-CCCeEEEEEEEeccc--------------------------------------
Confidence            35789999999999999999999965 457789999875431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhc---
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDK---  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---  300 (362)
                                         ........+..|+.+++.++||||++++++|..  ...+|+||||+++++|.+++...   
T Consensus        51 -------------------l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~  111 (1021)
T PTZ00266         51 -------------------LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKM  111 (1021)
T ss_pred             -------------------cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhc
Confidence                               112234567889999999999999999998854  46799999999999999988752   


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHC-------CcEeecCCCCcEEecC-----------------CCcEEEEeccccee
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHSR-------NIIYRDLKPENLLLST-----------------SGYVKLVDFGFAKK  355 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~~-------~iiHrDikp~NIl~~~-----------------~~~~kl~DFG~a~~  355 (362)
                       ..+++..++.|+.||+.||.|||+.       +|+||||||+|||++.                 .+.+||+|||+++.
T Consensus       112 ~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~  191 (1021)
T PTZ00266        112 FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN  191 (1021)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence             4699999999999999999999985       4999999999999964                 23489999999976


Q ss_pred             cC
Q psy14740        356 LI  357 (362)
Q Consensus       356 ~~  357 (362)
                      +.
T Consensus       192 l~  193 (1021)
T PTZ00266        192 IG  193 (1021)
T ss_pred             cc
Confidence            53

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=5.6e-23  Score=183.40  Aligned_cols=147  Identities=29%  Similarity=0.415  Sum_probs=130.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.+|.|+||.||.+...   ++.+++|.+....                                       
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~---~~~v~iK~~~~~~---------------------------------------   41 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYR---GQKVAVKCLKDDS---------------------------------------   41 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEec---CcEEEEEEeccch---------------------------------------
Confidence            3567899999999999999999743   6789999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~  304 (362)
                                           ....++..|+.+++.++||||+++++++.+.+..|++|||+++++|.+++....  .++
T Consensus        42 ---------------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~  100 (256)
T cd05039          42 ---------------------TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVIT  100 (256)
T ss_pred             ---------------------hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCC
Confidence                                 133567889999999999999999999988899999999999999999998654  689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.++..
T Consensus       101 ~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~  152 (256)
T cd05039         101 LAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccc
Confidence            9999999999999999999999999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.90  E-value=3.8e-23  Score=190.58  Aligned_cols=141  Identities=25%  Similarity=0.471  Sum_probs=116.6

Q ss_pred             EEecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        155 TTLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      ..||+|+||.||++.... ..++.+|+|.+....                                              
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----------------------------------------------   40 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----------------------------------------------   40 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC----------------------------------------------
Confidence            579999999999998643 356789999875321                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhc---------CC
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDK---------GN  302 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---------~~  302 (362)
                                     ......+|+.+++.++||||+++++++..  ...+|++|||+ +++|.+++...         ..
T Consensus        41 ---------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~  104 (317)
T cd07868          41 ---------------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQ  104 (317)
T ss_pred             ---------------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-CCCHHHHHHhcccccccCCccc
Confidence                           11235689999999999999999998854  46789999998 56888877532         24


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe----cCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~----~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+.+.
T Consensus       105 l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868         105 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence            8899999999999999999999999999999999999    456789999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=6.3e-23  Score=183.54  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=130.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.+|.|+||.||++...+  ++.+++|.+....                                       
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~--~~~~~vK~~~~~~---------------------------------------   42 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNG--TTKVAVKTLKPGT---------------------------------------   42 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcC--CceEEEEEecCCc---------------------------------------
Confidence            35789999999999999999998543  4678999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~  304 (362)
                                           .....+.+|+.+++.++||||+++++++......+++|||+++++|.+++....  .++
T Consensus        43 ---------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~  101 (261)
T cd05034          43 ---------------------MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLR  101 (261)
T ss_pred             ---------------------cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCC
Confidence                                 112457889999999999999999999998889999999999999999997643  589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..++.|++.|+.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034         102 LPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceecc
Confidence            99999999999999999999999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=4.4e-23  Score=184.37  Aligned_cols=144  Identities=25%  Similarity=0.405  Sum_probs=123.4

Q ss_pred             EecccceecEEEEEec-CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        156 TLGVGGFGRVELVQIA-GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      .||+|+||.||++.+. ...+..+|+|++....                                               
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-----------------------------------------------   34 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-----------------------------------------------   34 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-----------------------------------------------
Confidence            4899999999998643 3456789999875431                                               


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                                ........+..|+.+++.++||||+++++++. .+..+++|||+++++|.+++...+.+++..+..++.|
T Consensus        35 ----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~q  103 (257)
T cd05116          35 ----------NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQ  103 (257)
T ss_pred             ----------CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHH
Confidence                      11223456788999999999999999999875 4567999999999999999987778999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|+|++|++||||||.||+++.++.++|+|||+++.+.
T Consensus       104 i~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~  146 (257)
T cd05116         104 VSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALG  146 (257)
T ss_pred             HHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence            9999999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0579|consensus

Probab=99.90  E-value=1e-24  Score=204.23  Aligned_cols=148  Identities=30%  Similarity=0.476  Sum_probs=129.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +-|.++..||.|+||.||++.+. +++-..|-|++..                                           
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nk-et~~lAAaKvIet-------------------------------------------   67 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNK-ETKLLAAAKVIET-------------------------------------------   67 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcc-cchhhhhhhhhcc-------------------------------------------
Confidence            45788999999999999999854 6666666676532                                           


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                      .+......++-|++||..++||+|+++++.|..++.+||+.|||.||.+..++-. ...+++.+
T Consensus        68 ----------------kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~Q  131 (1187)
T KOG0579|consen   68 ----------------KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQ  131 (1187)
T ss_pred             ----------------cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHH
Confidence                            3344567788999999999999999999999999999999999999999887765 45699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.+++|++.||.|||++.|||||||..|||+.-+|.++|+|||.+.+.
T Consensus       132 Iqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn  180 (1187)
T KOG0579|consen  132 IQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKN  180 (1187)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccc
Confidence            9999999999999999999999999999999999999999999998654

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=2.3e-23  Score=189.13  Aligned_cols=149  Identities=30%  Similarity=0.492  Sum_probs=129.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... ..++.+|+|.+...                                          
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~a~k~~~~~------------------------------------------   37 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHR-PTGVTMAMKEIRLE------------------------------------------   37 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEc-CCCcEEEEEEeecc------------------------------------------
Confidence            36888999999999999999865 45788999987432                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---CCCCH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---GNFDD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~  305 (362)
                                      ........+.+|+.+++.++||||+++++.+..++.+|++|||+++++|.+++...   ..+++
T Consensus        38 ----------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~  101 (286)
T cd06622          38 ----------------LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPE  101 (286)
T ss_pred             ----------------cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCH
Confidence                            01122356788999999999999999999999999999999999999999988763   36899


Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++..+
T Consensus       102 ~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622         102 DVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            9999999999999999997 59999999999999999999999999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.90  E-value=3.5e-23  Score=186.88  Aligned_cols=153  Identities=38%  Similarity=0.639  Sum_probs=135.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.||.|+||.||.+... .+++.+++|++.+..                                         
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   38 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEK-ETNKEYAIKILDKRQ-----------------------------------------   38 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEc-CCCCEEEEEEechHh-----------------------------------------
Confidence            47899999999999999999865 457889999886531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     .........+..|..+++.++ ||||+++++++...+..+++||++++++|.+++.+.+.+++..
T Consensus        39 ---------------~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  103 (280)
T cd05581          39 ---------------LIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKC  103 (280)
T ss_pred             ---------------ccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence                           111222356788999999998 9999999999999999999999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||++..+..
T Consensus       104 ~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581         104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999999999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.90  E-value=4.6e-23  Score=188.81  Aligned_cols=153  Identities=29%  Similarity=0.435  Sum_probs=130.0

Q ss_pred             cccCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++...    ...+..+|+|.+.+..                                   
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-----------------------------------   77 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-----------------------------------   77 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-----------------------------------
Confidence            3467899999999999999998742    2334568888765421                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             .......+.+|+.+++.+ +||||+++++++...+..|++|||+++++|.+++....
T Consensus        78 -----------------------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  134 (302)
T cd05055          78 -----------------------HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKR  134 (302)
T ss_pred             -----------------------ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCC
Confidence                                   112235678899999999 79999999999999999999999999999999997643


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 --NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 --~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                        .+++.++..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||+++.+.
T Consensus       135 ~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  192 (302)
T cd05055         135 ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIM  192 (302)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence              38999999999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.4e-23  Score=188.32  Aligned_cols=149  Identities=32%  Similarity=0.490  Sum_probs=131.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||.|+||.||++.... ++..+++|.+...                                         
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~-----------------------------------------   41 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIE-----------------------------------------   41 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeC-----------------------------------------
Confidence            4568889999999999999998654 5778999987432                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                        .......+..|+.+++.++||||+++++.+..+...|+||||+++++|.+++.+. ..+++.
T Consensus        42 ------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~  103 (280)
T cd06611          42 ------------------SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEP  103 (280)
T ss_pred             ------------------CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHH
Confidence                              1223355788999999999999999999999999999999999999999998764 469999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus       104 ~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611         104 QIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhh
Confidence            99999999999999999999999999999999999999999999988654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.90  E-value=6.6e-23  Score=182.83  Aligned_cols=153  Identities=31%  Similarity=0.498  Sum_probs=132.3

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.||.|+||.||++... .+++.+++|.+.....                                         
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~-~~~~~~~ik~~~~~~~-----------------------------------------   38 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNL-DDGDFFAVKEVSLADD-----------------------------------------   38 (258)
T ss_pred             CccccceeeecCCceEEEEEEc-CCCcEEEEEEEEEccc-----------------------------------------
Confidence            4677788999999999999855 4578899998754311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   ........+.+.+|+.+++.++||||+++++++.....+|++|||+++++|.+++.+...+++..+.
T Consensus        39 -------------~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  105 (258)
T cd06632          39 -------------GQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIR  105 (258)
T ss_pred             -------------cccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHH
Confidence                         0111223456889999999999999999999999999999999999999999999887779999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus       106 ~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632         106 LYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999999999999999999999999999999999999999999987654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.90  E-value=6.4e-23  Score=185.71  Aligned_cols=144  Identities=30%  Similarity=0.598  Sum_probs=119.1

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++... .+++.+|+|.+.+....                                              
T Consensus         1 ~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~----------------------------------------------   33 (279)
T cd05633           1 IIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIK----------------------------------------------   33 (279)
T ss_pred             CcccCCCeEEEEEEEC-CCCcEEEEEEEEccccc----------------------------------------------
Confidence            3799999999999855 45789999988654210                                              


Q ss_pred             hhhccccccccchhhhhhHHHHHH---HhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEI---MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~---l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                                .........+|..+   +...+||||+.+++.+..++..++||||+++++|.+++...+.+++..+..++
T Consensus        34 ----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~  103 (279)
T cd05633          34 ----------MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYA  103 (279)
T ss_pred             ----------cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence                      00111122334333   33457999999999999999999999999999999999887889999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .|++.||.|||+++|+||||||+||+++.++.++|+|||++..+
T Consensus       104 ~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633         104 TEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             HHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            99999999999999999999999999999999999999998755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=4.7e-23  Score=186.28  Aligned_cols=143  Identities=36%  Similarity=0.641  Sum_probs=124.2

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||.+... .+++.+++|.+.+..                                                 
T Consensus         1 lg~g~~g~vy~~~~~-~~~~~~~ik~~~~~~-------------------------------------------------   30 (277)
T cd05577           1 LGKGGFGEVCACQVK-ATGKMYACKKLDKKR-------------------------------------------------   30 (277)
T ss_pred             CCCCCceeEEEEEEc-CCCcEEEEEEEehhh-------------------------------------------------
Confidence            689999999999854 458889999886531                                                 


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTAC  314 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~q  314 (362)
                             .........+..|+++++.++||||+++++++...+.+|+||||+++++|.+++.+..  .+++..+..++.|
T Consensus        31 -------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~q  103 (277)
T cd05577          31 -------LKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQ  103 (277)
T ss_pred             -------hhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHH
Confidence                   1111223456789999999999999999999999999999999999999999987655  6899999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|||++|++|+||+|+||+++.++.++|+|||.+..+
T Consensus       104 l~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~  145 (277)
T cd05577         104 IICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVEL  145 (277)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhh
Confidence            999999999999999999999999999999999999988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.90  E-value=5.5e-23  Score=187.07  Aligned_cols=149  Identities=23%  Similarity=0.391  Sum_probs=125.3

Q ss_pred             CcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +|++...||+|+||.||++.....    ....+++|.+.+.                                       
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---------------------------------------   41 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN---------------------------------------   41 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC---------------------------------------
Confidence            477889999999999999985432    2245677766432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-----
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-----  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----  300 (362)
                                         ........+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++...     
T Consensus        42 -------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  102 (290)
T cd05045          42 -------------------ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGP  102 (290)
T ss_pred             -------------------CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccc
Confidence                               11122356888999999999999999999999999999999999999999988642     


Q ss_pred             -------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 -------------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 -------------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                                         ..++...+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~  177 (290)
T cd05045         103 SYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV  177 (290)
T ss_pred             cccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccc
Confidence                               23778899999999999999999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=7.1e-23  Score=184.44  Aligned_cols=157  Identities=30%  Similarity=0.456  Sum_probs=132.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||.|+||.||++... .+++.+|+|.+.........                                     
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~-~~~~~~a~K~~~~~~~~~~~-------------------------------------   43 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNV-TTGEMMAVKQVELPATIAGR-------------------------------------   43 (272)
T ss_pred             ceeecceecccCceEEEEEeec-CCCceeeeeeeechhhhhcc-------------------------------------
Confidence            4778899999999999999854 45788999987543110000                                     


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                  .........+.+..|+.+++.++|||++++++++...+..++||||+++++|.+++.+.+.+++..+.
T Consensus        44 ------------~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  111 (272)
T cd06629          44 ------------HDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVR  111 (272)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHH
Confidence                        00011122356788999999999999999999999999999999999999999999887789999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.||.|||+++++|+||+|+||+++.++.++|+|||+++..
T Consensus       112 ~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629         112 FFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             HHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            99999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0577|consensus

Probab=99.90  E-value=3.8e-24  Score=199.03  Aligned_cols=143  Identities=29%  Similarity=0.417  Sum_probs=125.6

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||.|+||.||.+.+. .+.+.||||.+.-.                                                 
T Consensus        33 EIGHGSFGAVYfArd~-~n~evVAIKKMsyS-------------------------------------------------   62 (948)
T KOG0577|consen   33 EIGHGSFGAVYFARDV-RNSEVVAIKKMSYS-------------------------------------------------   62 (948)
T ss_pred             HhcCCccceeEEeecc-Cccceeeeeecccc-------------------------------------------------
Confidence            3899999999999855 56788999988543                                                 


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~q  314 (362)
                             -.++...++.+..|+..|..++|||++.+-++|..+...|+||||| -||-.+++.- .+++.+..+..|..+
T Consensus        63 -------GKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGSAsDlleVhkKplqEvEIAAi~~g  134 (948)
T KOG0577|consen   63 -------GKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAITHG  134 (948)
T ss_pred             -------ccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hccHHHHHHHHhccchHHHHHHHHHH
Confidence                   1233456678999999999999999999999999999999999999 6777887764 357999999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+.||.|||+++.||||||..|||++..|.|||+|||.|...
T Consensus       135 aL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~  176 (948)
T KOG0577|consen  135 ALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM  176 (948)
T ss_pred             HHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc
Confidence            999999999999999999999999999999999999998643

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.90  E-value=1.1e-22  Score=182.90  Aligned_cols=152  Identities=26%  Similarity=0.350  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCC--CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPS--RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .++|+..+.+|+|+||.||++....+.+  ..+++|.+...                                       
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~---------------------------------------   44 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG---------------------------------------   44 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEecccc---------------------------------------
Confidence            4578889999999999999998654322  36888876432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ......+.+..|+.+++.++||||+++++++...+..|++|||+++++|.+++... +.++
T Consensus        45 -------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  105 (268)
T cd05063          45 -------------------YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFS  105 (268)
T ss_pred             -------------------CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCC
Confidence                               01223355788999999999999999999999999999999999999999998764 4689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.|+.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus       106 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063         106 SYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            99999999999999999999999999999999999999999999999997663

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.90  E-value=7e-23  Score=186.57  Aligned_cols=149  Identities=32%  Similarity=0.483  Sum_probs=130.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|++.+.+|.|+||.||++... .+++.+++|.+...                                         
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~-----------------------------------------   48 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNK-ETGALAAAKVIETK-----------------------------------------   48 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEEC-CCCceEEEEEeccC-----------------------------------------
Confidence            366899999999999999999855 45778999987542                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~  306 (362)
                                        .......+.+|+.+++.++||||+++++.+..+..+|+||||+++++|..++.+ ...+++.
T Consensus        49 ------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~  110 (292)
T cd06644          49 ------------------SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEP  110 (292)
T ss_pred             ------------------CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHH
Confidence                              122345578899999999999999999999999999999999999999887754 3568999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.+|.|||+++++||||||+||+++.++.++|+|||++...
T Consensus       111 ~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644         111 QIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            99999999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=1.5e-22  Score=180.53  Aligned_cols=150  Identities=23%  Similarity=0.486  Sum_probs=128.3

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||.+.+.. +++.+++|.+....                                          
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~------------------------------------------   37 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT-DGKQYVIKKLNLRN------------------------------------------   37 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC-CCcEEEEEEEehhh------------------------------------------
Confidence            48899999999999999999654 47789999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc--CCCCHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK--GNFDDA  306 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~  306 (362)
                                     ........+.+|+++++.++|||++++++.+.. ...+|++|||+++++|.+++...  ..+++.
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~  102 (257)
T cd08223          38 ---------------ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPEN  102 (257)
T ss_pred             ---------------cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHH
Confidence                           111233457889999999999999999998764 45689999999999999988763  358999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.|++.|+.+||+.|++|+||||+||+++.++.++|+|||++..+.
T Consensus       103 ~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223         103 QVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence            999999999999999999999999999999999999999999999997664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=9.6e-23  Score=184.38  Aligned_cols=152  Identities=23%  Similarity=0.369  Sum_probs=128.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCC---CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDP---SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ...+|++.+.||+|+||.||++......   ...+++|...+..                                    
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~------------------------------------   48 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET------------------------------------   48 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC------------------------------------
Confidence            4567899999999999999999864322   2257888764421                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                            .......+.+|+.+++.++||||+++++++.. ...+++|||+++++|.+++..+ ..
T Consensus        49 ----------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~  105 (279)
T cd05057          49 ----------------------SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDN  105 (279)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCC
Confidence                                  12233557889999999999999999999876 7899999999999999998764 45


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057         106 IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            8999999999999999999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.90  E-value=5.1e-23  Score=185.30  Aligned_cols=149  Identities=26%  Similarity=0.326  Sum_probs=121.2

Q ss_pred             EEEEEecccceecEEEEEecCCCC-CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPS-RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      .+.+.||+|+||.||++.+..... ..+|+|.+...                                            
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~--------------------------------------------   37 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA--------------------------------------------   37 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccC--------------------------------------------
Confidence            456789999999999998654322 25888876542                                            


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHh-----
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRD-----  299 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~-----  299 (362)
                                   .........+..|+.+++.++||||+++++.+..      ....+++|||+++++|.+++..     
T Consensus        38 -------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~  104 (272)
T cd05075          38 -------------ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGD  104 (272)
T ss_pred             -------------cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccC
Confidence                         1122334667889999999999999999986532      2357899999999999988742     


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 -KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 -~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  163 (272)
T cd05075         105 CPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIY  163 (272)
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccC
Confidence             1347899999999999999999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.90  E-value=8.7e-23  Score=183.04  Aligned_cols=147  Identities=24%  Similarity=0.394  Sum_probs=125.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+.+  ...+++|.+.+..                                        
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~--~~~valK~~~~~~----------------------------------------   42 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT----------------------------------------   42 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecC--CceEEEEecccCc----------------------------------------
Confidence            3579999999999999999998643  2458999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                          .....+.+|+.+++.++||||+++++.+. .+..|++|||+++++|.+++.+.  ..++.
T Consensus        43 --------------------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  101 (262)
T cd05071          43 --------------------MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRL  101 (262)
T ss_pred             --------------------cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCH
Confidence                                01235788999999999999999999875 45689999999999999999753  34789


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|+|+.+++|+||||+||+++.++.++|+|||.++.+.
T Consensus       102 ~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~  153 (262)
T cd05071         102 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  153 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecc
Confidence            9999999999999999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=3.3e-23  Score=192.69  Aligned_cols=150  Identities=29%  Similarity=0.438  Sum_probs=125.5

Q ss_pred             cCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ++|++.+.||.|+||.||.+...+    .+++.+|+|.+....                                     
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-------------------------------------   49 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-------------------------------------   49 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-------------------------------------
Confidence            478999999999999999997432    235689999875320                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc--
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                           .......+..|+.++..+ +||||+++++++.. ...++++|||+++++|.+++...  
T Consensus        50 ---------------------~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~  108 (337)
T cd05054          50 ---------------------TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRE  108 (337)
T ss_pred             ---------------------CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccc
Confidence                                 112234577899999999 89999999998754 45689999999999999988542  


Q ss_pred             -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Q psy14740        301 -----------------------------------------------------------GNFDDATTRFYTACVVEAFDY  321 (362)
Q Consensus       301 -----------------------------------------------------------~~l~~~~~~~~~~ql~~al~~  321 (362)
                                                                                 .+++...+..++.|++.||.|
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~  188 (337)
T cd05054         109 CFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEF  188 (337)
T ss_pred             cccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence                                                                       257888999999999999999


Q ss_pred             HHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       322 lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ||++||+||||||+||+++.++.++|+|||+++.+
T Consensus       189 lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~  223 (337)
T cd05054         189 LASRKCIHRDLAARNILLSENNVVKICDFGLARDI  223 (337)
T ss_pred             HHhCCeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence            99999999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG1094|consensus

Probab=99.90  E-value=9.8e-24  Score=196.09  Aligned_cols=153  Identities=25%  Similarity=0.387  Sum_probs=133.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +...+.++||+|.||+|.+++..+  ...||+|.++..+                                         
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~a-----------------------------------------  574 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPDA-----------------------------------------  574 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecC--ceEEEEeecCccc-----------------------------------------
Confidence            345677889999999999999665  5679999987652                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC--CCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~  306 (362)
                                       .......|.+|+.+|.+++||||+.+.+++..++.+++++||+++|+|.+++..+..  ....
T Consensus       575 -----------------~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~  637 (807)
T KOG1094|consen  575 -----------------TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETA  637 (807)
T ss_pred             -----------------chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccc
Confidence                             122346799999999999999999999999999999999999999999999987632  3556


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ....++.||++|++||.+.+++|||+.+.|+|++.++++||+|||++|.+.++.|
T Consensus       638 ~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  638 PGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             hhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCc
Confidence            6677999999999999999999999999999999999999999999998887766

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.90  E-value=8.1e-23  Score=185.01  Aligned_cols=151  Identities=24%  Similarity=0.371  Sum_probs=123.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCc----eeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRS----FALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ...+|++.+.||.|+||.||++.+... ++.    +++|.+...                                    
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~-~~~~~~~~~~k~~~~~------------------------------------   47 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPE-GDSIKIPVAIKTIQDR------------------------------------   47 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCC-CCceeeEEEEeecccc------------------------------------
Confidence            456889999999999999999986432 433    455544211                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-C
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-G  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~  301 (362)
                                            ........+..|+.+++.++||||+++++++.. ...++++||+++++|.+++... +
T Consensus        48 ----------------------~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~  104 (279)
T cd05111          48 ----------------------SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRD  104 (279)
T ss_pred             ----------------------cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhccc
Confidence                                  111223456778888899999999999998754 4578899999999999999764 4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.+.
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111         105 SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            68999999999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.90  E-value=5.7e-23  Score=190.32  Aligned_cols=145  Identities=17%  Similarity=0.263  Sum_probs=124.1

Q ss_pred             EEEEeccc--ceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        153 VITTLGVG--GFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       153 ~~~~lg~G--~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      +++.||+|  +||.||++... .+++.+|+|.+....                                           
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~-~~~~~vaiK~~~~~~-------------------------------------------   37 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK-PTGEYVTVRRINLEA-------------------------------------------   37 (327)
T ss_pred             hhhhccccccceEEEEEEeec-ccCcEEEEEEechhh-------------------------------------------
Confidence            45678999  78899999855 568899999875431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~  308 (362)
                                    ........+.+|+.+++.++||||+++++++..++..|+||||+++++|.+++...  ..+++..+
T Consensus        38 --------------~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~  103 (327)
T cd08227          38 --------------CTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAI  103 (327)
T ss_pred             --------------ccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHH
Confidence                          11223345778999999999999999999999999999999999999999998653  45899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ..++.|++.||.|||+++|+||||||+||+++.++.++++|||.+..
T Consensus       104 ~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~  150 (327)
T cd08227         104 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS  150 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhc
Confidence            99999999999999999999999999999999999999999986543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.90  E-value=9.7e-23  Score=186.14  Aligned_cols=148  Identities=27%  Similarity=0.441  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.+|.|+||.||++... .+++.+++|.+....                                        
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~v~ik~~~~~~----------------------------------------   57 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQ----------------------------------------   57 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEEC-CCCcEEEEEEEecCC----------------------------------------
Confidence            468999999999999999999854 457789999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++.+..+...|+||||+++++|.+++.. ..+++..
T Consensus        58 -------------------~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~  117 (296)
T cd06654          58 -------------------QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQ  117 (296)
T ss_pred             -------------------cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHH
Confidence                               11224577899999999999999999999999999999999999999998865 4689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||+++..
T Consensus       118 ~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~  166 (296)
T cd06654         118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence            9999999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0201|consensus

Probab=99.90  E-value=1.7e-24  Score=195.32  Aligned_cols=152  Identities=28%  Similarity=0.455  Sum_probs=135.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|+..+.||.|+||.||++.+ ..+++.+|+|++.-.                                          
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d-~~t~k~vAiKii~Le------------------------------------------   49 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAID-NKTKKVVAIKIIDLE------------------------------------------   49 (467)
T ss_pred             cccccchhccccccceeeeeee-ccccceEEEEEechh------------------------------------------
Confidence            4567779999999999999994 467889999998543                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+++|+.++.++++|||.++|+.|..+..+|++||||.||++.++++....+++..+
T Consensus        50 ----------------~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i  113 (467)
T KOG0201|consen   50 ----------------EAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEI  113 (467)
T ss_pred             ----------------hcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCcccee
Confidence                            1223345678999999999999999999999999999999999999999999998777799999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++++++.|+.|+|.++.+|||||+.|||+..+|.+||+|||.+.++...
T Consensus       114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~  164 (467)
T KOG0201|consen  114 AVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT  164 (467)
T ss_pred             eeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech
Confidence            999999999999999999999999999999999999999999999887653

>KOG1026|consensus

Probab=99.90  E-value=9.3e-24  Score=204.86  Aligned_cols=155  Identities=27%  Similarity=0.449  Sum_probs=136.0

Q ss_pred             cCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      .+....+.||+|.||+||+++-.+    ....-||||.++..                                      
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--------------------------------------  527 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--------------------------------------  527 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--------------------------------------
Confidence            455677789999999999998654    23456889988643                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC---
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG---  301 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---  301 (362)
                                          .+...+++|.+|++++..++|||||++++++..++.+|+|+||+..|||.+++....   
T Consensus       528 --------------------a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a  587 (774)
T KOG1026|consen  528 --------------------AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKA  587 (774)
T ss_pred             --------------------ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCcc
Confidence                                344567889999999999999999999999999999999999999999999997421   


Q ss_pred             -----------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        302 -----------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       302 -----------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                                 +++..+...++.||+.|+.||-++.++||||-..|.|++.+-.|||+|||++|.+.+.+|
T Consensus       588 ~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDY  658 (774)
T KOG1026|consen  588 DKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDY  658 (774)
T ss_pred             ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhh
Confidence                       277899999999999999999999999999999999999999999999999999888776

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.90  E-value=1.1e-22  Score=182.62  Aligned_cols=152  Identities=34%  Similarity=0.503  Sum_probs=129.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.+|+|+||.||++... .++..+++|.+.....                                         
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~~~-----------------------------------------   40 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDV-DTGRELAAKQVQFDPE-----------------------------------------   40 (266)
T ss_pred             CccccceecCCCCEEEEEEEEc-CCCcEEEEEEeecCcC-----------------------------------------
Confidence            6888999999999999999855 4577899998754311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                   ..........+.+|+.+++.++||||+++++++..  ...++++|||+++++|.+++...+.+++..
T Consensus        41 -------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~  107 (266)
T cd06651          41 -------------SPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESV  107 (266)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHH
Confidence                         01112233567889999999999999999998765  367899999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ...++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.+
T Consensus       108 ~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651         108 TRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            9999999999999999999999999999999999999999999998755

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.89  E-value=9.9e-23  Score=189.28  Aligned_cols=152  Identities=26%  Similarity=0.397  Sum_probs=127.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC------CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD------PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ..+|++.+.||+|+||.||++.+.+.      ....+++|.+...                                   
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-----------------------------------   55 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-----------------------------------   55 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-----------------------------------
Confidence            35689999999999999999985431      1235788866431                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             ........+.+|+.+++.+ +||||+++++++...+..|++|||+++++|.+++.+.
T Consensus        56 -----------------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          56 -----------------------ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             -----------------------cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence                                   1122345678899999999 8999999999999999999999999999999998753


Q ss_pred             C----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 G----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .                .++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       113 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (334)
T cd05100         113 RPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVH  185 (334)
T ss_pred             CCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecc
Confidence            2                36678888999999999999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.2e-22  Score=182.31  Aligned_cols=154  Identities=32%  Similarity=0.478  Sum_probs=130.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|++.+.||+|+||.||++.+. .+++.+++|.+.....                                        
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~~ik~~~~~~~----------------------------------------   40 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDA-DTGRELAVKQVPFDPD----------------------------------------   40 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEc-CCCCEEEEEEEecCcc----------------------------------------
Confidence            46899999999999999999855 4578899998643210                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                    ..........+.+|+.+++.++||||+++++.+.+.  ..++++|||+++++|.+++.+.+.+++.
T Consensus        41 --------------~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~  106 (264)
T cd06653          41 --------------SQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTEN  106 (264)
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHH
Confidence                          001122345688999999999999999999988654  5689999999999999999877779999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653         107 VTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence            999999999999999999999999999999999999999999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=2.2e-23  Score=188.88  Aligned_cols=153  Identities=22%  Similarity=0.360  Sum_probs=128.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      .+.+|++.+.||.|+||.||++...+    ..++.+|+|.+....                                   
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-----------------------------------   47 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-----------------------------------   47 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-----------------------------------
Confidence            34567788899999999999998643    235678999875320                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                             .......+..|+.++..++||||+++++++...+..++++||+++++|.+++...  
T Consensus        48 -----------------------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~  104 (283)
T cd05091          48 -----------------------EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSP  104 (283)
T ss_pred             -----------------------CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCC
Confidence                                   1123355788999999999999999999999999999999999999999988531  


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                    ..++...+..++.|++.||.|+|++|++||||||+||+++.++.+||+|||+++.+.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (283)
T cd05091         105 HSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVY  175 (283)
T ss_pred             CccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccc
Confidence                          247888899999999999999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG2345|consensus

Probab=99.89  E-value=2.6e-23  Score=174.92  Aligned_cols=151  Identities=24%  Similarity=0.346  Sum_probs=130.7

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++...+|+|+|+.||+++.. .+++.||+|.+.-.                                       
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~-s~~~~YAlKkI~c~---------------------------------------   57 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGL-STGHLYALKKILCH---------------------------------------   57 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeeccc-Ccccchhhheeecc---------------------------------------
Confidence            35678999999999999999999955 45788999987432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhc
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                          +.......++|++..++++|||++++++....+     ...|++++|+..|+|.+.+...
T Consensus        58 --------------------~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~  117 (302)
T KOG2345|consen   58 --------------------SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERL  117 (302)
T ss_pred             --------------------chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHH
Confidence                                244567789999999999999999998875432     4599999999999999988753


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 ----GNFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ----~~l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                          ..+++.++..++.+++.||++||+..  +.||||||.|||++..+.++|.|||.+.+.
T Consensus       118 k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  118 KIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQA  179 (302)
T ss_pred             hhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence                25899999999999999999999998  999999999999999999999999998753

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.89  E-value=8e-23  Score=185.20  Aligned_cols=146  Identities=31%  Similarity=0.502  Sum_probs=127.0

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.||.|+||.||++... ..+..+++|.+...                                            
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~-~~~~~~~~k~~~~~--------------------------------------------   41 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNK-ETGVLAAAKVIDTK--------------------------------------------   41 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEEC-CCCeEEEEEEeCCC--------------------------------------------
Confidence            567788999999999999855 45677888877432                                            


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~  309 (362)
                                     .......+.+|+++++.++||||+++++.+......|+||||+++++|..++.+ ..++++..+.
T Consensus        42 ---------------~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~  106 (282)
T cd06643          42 ---------------SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIR  106 (282)
T ss_pred             ---------------CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHH
Confidence                           112234577899999999999999999999999999999999999999887764 4568999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++...
T Consensus       107 ~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643         107 VVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccc
Confidence            99999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.89  E-value=1.2e-22  Score=184.10  Aligned_cols=150  Identities=26%  Similarity=0.473  Sum_probs=131.2

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|+|+||.||++.+. .+++.+++|.+.....                                         
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~vK~~~~~~~-----------------------------------------   38 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDR-ETGETVALKKVALRRL-----------------------------------------   38 (286)
T ss_pred             CceEEeecccCCCcEEEEEEEC-CCCceEEEEEEEcccc-----------------------------------------
Confidence            5889999999999999999865 3478899998765311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~  308 (362)
                                      .......+.+|+.+++.++||||+++++++..+..+|+||||+ +++|.+++.. ...+++..+
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~  101 (286)
T cd07832          39 ----------------EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQV  101 (286)
T ss_pred             ----------------cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHH
Confidence                            1123356788999999999999999999999999999999999 9999998865 356899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+..
T Consensus       102 ~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~  151 (286)
T cd07832         102 KSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSE  151 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence            99999999999999999999999999999999999999999999887644

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.89  E-value=1e-22  Score=184.83  Aligned_cols=152  Identities=31%  Similarity=0.484  Sum_probs=131.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.+|+|+||.||++.+. .+++.+++|.+....                                         
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~-~~~~~v~vK~~~~~~-----------------------------------------   38 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNK-ATGEIVAIKKFKESE-----------------------------------------   38 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeC-CCCcEEEEehhhhhc-----------------------------------------
Confidence            36899999999999999999855 457889999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|+.+++.++||||+++++++...+..|++|||++++.+..+..+...+++..+
T Consensus        39 ----------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~  102 (288)
T cd07833          39 ----------------DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAV  102 (288)
T ss_pred             ----------------ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHH
Confidence                            1122345678899999999999999999999999999999999988777766666667999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++..+..
T Consensus       103 ~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833         103 RSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            99999999999999999999999999999999999999999999876644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.89  E-value=8.4e-23  Score=182.91  Aligned_cols=145  Identities=74%  Similarity=1.217  Sum_probs=127.9

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||.|+||.||++.... .++.+++|.+.+..                                                 
T Consensus         1 lg~g~~~~v~~~~~~~-~~~~~~iK~~~~~~-------------------------------------------------   30 (262)
T cd05572           1 LGVGGFGRVELVKVKS-KNRTFALKCVKKRH-------------------------------------------------   30 (262)
T ss_pred             CCCCCceEEEEEEECC-CCcEEEEEEEehhc-------------------------------------------------
Confidence            6899999999999654 57889999886531                                                 


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV  316 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~  316 (362)
                             .........+.+|+.+++.++||||+++++.+.++..+|++|||+++++|.+++.+...+++..+..++.|++
T Consensus        31 -------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~  103 (262)
T cd05572          31 -------IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVV  103 (262)
T ss_pred             -------chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHH
Confidence                   1112234568899999999999999999999999999999999999999999998877799999999999999


Q ss_pred             HHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       317 ~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .||.|+|+++++|+||+|+||+++.++.++|+|||+++.+..
T Consensus       104 ~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572         104 LAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            999999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.89  E-value=1.1e-22  Score=181.91  Aligned_cols=147  Identities=24%  Similarity=0.405  Sum_probs=126.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++++.||+|+||.||++...  .++.+|+|.+.+..                                        
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~--~~~~~a~K~~~~~~----------------------------------------   42 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYN--GHTKVAIKSLKQGS----------------------------------------   42 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecC--CCceEEEEEecCCC----------------------------------------
Confidence            357899999999999999999843  36779999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                          .....+.+|+.+++.++||||+++++++. .+.+|++||++++++|.+++...  ..++.
T Consensus        43 --------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~  101 (260)
T cd05067          43 --------------------MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTI  101 (260)
T ss_pred             --------------------CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCH
Confidence                                11245788999999999999999999874 45799999999999999988653  35889


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067         102 NKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            9999999999999999999999999999999999999999999999998665

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.89  E-value=1.5e-22  Score=183.73  Aligned_cols=150  Identities=26%  Similarity=0.440  Sum_probs=127.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++... ..++.+++|.+....                                       
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~~ik~~~~~~---------------------------------------   55 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNK-KNGSKAAVKILDPIH---------------------------------------   55 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEEC-CCCceeEEEeecccc---------------------------------------
Confidence            4678999999999999999999865 457789999764320                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHh-
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRD-  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~-  299 (362)
                                           .....+..|+.+++.+ +||||+++++++.     .+..+|++|||+++++|.+++.. 
T Consensus        56 ---------------------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (286)
T cd06638          56 ---------------------DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGF  114 (286)
T ss_pred             ---------------------chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHh
Confidence                                 1123467788999998 7999999999873     45679999999999999988753 


Q ss_pred             ---cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 ---KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ---~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                         ...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.+.
T Consensus       115 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638         115 LKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             hccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence               2458899999999999999999999999999999999999999999999999998654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=1.3e-22  Score=181.40  Aligned_cols=142  Identities=30%  Similarity=0.442  Sum_probs=120.1

Q ss_pred             EecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        156 TLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      .||+|+||.||++.... ..+..+|+|.+...                                                
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~------------------------------------------------   33 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE------------------------------------------------   33 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc------------------------------------------------
Confidence            38999999999987543 23456889887532                                                


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTA  313 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~  313 (362)
                                ........+.+|+.+++.++||||+++++++.. +..++||||+++++|.+++.. ...+++..+..++.
T Consensus        34 ----------~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  102 (257)
T cd05115          34 ----------NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMH  102 (257)
T ss_pred             ----------cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHH
Confidence                      011233568899999999999999999998754 578999999999999999875 34689999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |++.||.|||++|++||||||+||+++.++.++|+|||+++.+
T Consensus       103 ~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~  145 (257)
T cd05115         103 QVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKAL  145 (257)
T ss_pred             HHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccc
Confidence            9999999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.89  E-value=1.6e-22  Score=180.61  Aligned_cols=147  Identities=29%  Similarity=0.473  Sum_probs=126.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.+|+|+||.||++...   +..+++|.+...                                        
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----------------------------------------   40 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND----------------------------------------   40 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc---CCcEEEEEeCCC----------------------------------------
Confidence            4568999999999999999998754   567898876432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeee-eccceEEEEEeccCCcchHHHHHhcC--CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKG--NF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~--~l  303 (362)
                                           .....+.+|+.+++.++|||++++++++ ......|++|||+++++|.+++.+..  .+
T Consensus        41 ---------------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~   99 (256)
T cd05082          41 ---------------------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL   99 (256)
T ss_pred             ---------------------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCC
Confidence                                 1124578899999999999999999875 45567999999999999999987643  37


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...
T Consensus       100 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082         100 GGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecc
Confidence            889999999999999999999999999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.89  E-value=1.2e-22  Score=181.10  Aligned_cols=149  Identities=28%  Similarity=0.433  Sum_probs=129.4

Q ss_pred             EEEEEecccceecEEEEEecCCC---CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDP---SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+.+.+|.|+||.||.+.+....   +..+++|.+....                                         
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-----------------------------------------   40 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-----------------------------------------   40 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-----------------------------------------
Confidence            46788999999999999976532   4789999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC--CCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~  306 (362)
                                       .......+..|+.++..++||||+++++++.+.+..|++||++++++|.+++.....  +++.
T Consensus        41 -----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~  103 (258)
T smart00219       41 -----------------DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLS  103 (258)
T ss_pred             -----------------ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHH
Confidence                             111345678899999999999999999999999999999999999999999976544  9999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||+++....
T Consensus       104 ~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219      104 DLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            9999999999999999999999999999999999999999999999986654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.89  E-value=1.6e-22  Score=184.74  Aligned_cols=149  Identities=27%  Similarity=0.430  Sum_probs=130.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+...+|.|+||.||.+... .+++.+++|.+...                                         
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~v~iK~~~~~-----------------------------------------   55 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDV-ATGQEVAIKQINLQ-----------------------------------------   55 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEc-CCCcEEEEEEEecc-----------------------------------------
Confidence            456999999999999999999854 45788999987432                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .......+.+|+.+++.++||||+++++++...+.+|+|+||+++++|..++.. ..+++..
T Consensus        56 ------------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~  116 (296)
T cd06655          56 ------------------KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQ  116 (296)
T ss_pred             ------------------cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHH
Confidence                              111234577899999999999999999999999999999999999999998875 4689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+.
T Consensus       117 ~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655         117 IAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence            99999999999999999999999999999999999999999999987653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.89  E-value=9.2e-23  Score=185.36  Aligned_cols=152  Identities=26%  Similarity=0.408  Sum_probs=129.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|++...||.|+||.||++...+    .++..+++|.+....                                    
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~------------------------------------   47 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA------------------------------------   47 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc------------------------------------
Confidence            4678999999999999999998643    346678888875421                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            .......+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++....  
T Consensus        48 ----------------------~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  105 (288)
T cd05050          48 ----------------------SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPR  105 (288)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcc
Confidence                                  11223557889999999999999999999999999999999999999999987432  


Q ss_pred             --------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 --------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 --------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                          .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         106 AQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             ccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecc
Confidence                                36778889999999999999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.89  E-value=9.9e-23  Score=183.31  Aligned_cols=143  Identities=22%  Similarity=0.299  Sum_probs=119.7

Q ss_pred             EecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        156 TLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      .||+|+||.||++...+ .+...+++|.+....                                               
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-----------------------------------------------   34 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-----------------------------------------------   34 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCC-----------------------------------------------
Confidence            58999999999997543 344568888764321                                               


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-----CCCHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-----NFDDATTR  309 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~  309 (362)
                                 .......+.+|+.+++.++||||+++++++.+...+++||||+++++|.+++....     ..+...+.
T Consensus        35 -----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  103 (269)
T cd05087          35 -----------SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQ  103 (269)
T ss_pred             -----------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHH
Confidence                       11123457889999999999999999999998899999999999999999987532     35667788


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.|+.|||+.+++||||||+||+++.++.++|+|||+++..
T Consensus       104 ~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  150 (269)
T cd05087         104 RMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNK  150 (269)
T ss_pred             HHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccc
Confidence            89999999999999999999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.89  E-value=1.3e-22  Score=183.43  Aligned_cols=152  Identities=26%  Similarity=0.421  Sum_probs=128.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|.+.+.||+|+||.||++.....    ....+++|.+...                                     
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-------------------------------------   47 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-------------------------------------   47 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-------------------------------------
Confidence            46789999999999999999986541    3567888866421                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                           ........+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++...+  
T Consensus        48 ---------------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~  106 (277)
T cd05036          48 ---------------------CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPR  106 (277)
T ss_pred             ---------------------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCC
Confidence                                 111223457889999999999999999999988889999999999999999987643  


Q ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceecC
Q psy14740        302 -----NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLI  357 (362)
Q Consensus       302 -----~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~~  357 (362)
                           .+++..+..++.|++.||.|||+++++||||||+||+++.++   .++|+|||+++.+.
T Consensus       107 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~  170 (277)
T cd05036         107 PERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY  170 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence                 478899999999999999999999999999999999998654   59999999998653

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.89  E-value=1.1e-22  Score=184.17  Aligned_cols=150  Identities=25%  Similarity=0.386  Sum_probs=127.5

Q ss_pred             ccCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ..++.+...+|+|+||.||++...    ...+..+++|.+...                                     
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-------------------------------------   46 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-------------------------------------   46 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-------------------------------------
Confidence            356788999999999999998642    223456777765432                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                            .......+.+|+++++.++||||+++++++...+..+++|||+++++|.+++...+  
T Consensus        47 ----------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~  104 (280)
T cd05092          47 ----------------------SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPD  104 (280)
T ss_pred             ----------------------CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcc
Confidence                                  12234568889999999999999999999999999999999999999999987542  


Q ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 -------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 -------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                                   .+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|+|||+++..
T Consensus       105 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  172 (280)
T cd05092         105 AKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  172 (280)
T ss_pred             hhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEc
Confidence                         3788999999999999999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.89  E-value=1.5e-22  Score=186.27  Aligned_cols=151  Identities=25%  Similarity=0.430  Sum_probs=126.7

Q ss_pred             CcEEEEEecccceecEEEEEecCC-CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGD-PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +|.+...||+|+||.||++..... .++.+|+|.+.+...                                        
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----------------------------------------   40 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----------------------------------------   40 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----------------------------------------
Confidence            478899999999999999996542 578999999865310                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc-----C
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-----G  301 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-----~  301 (362)
                                      ........+.+|+.+++.++||||+++++++.+.  ..+|+||||++ +++.+++...     .
T Consensus        41 ----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~  103 (316)
T cd07842          41 ----------------QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRV  103 (316)
T ss_pred             ----------------cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCc
Confidence                            1112234567899999999999999999999888  88999999995 5777766432     2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC----CCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~----~~~~kl~DFG~a~~~~  357 (362)
                      .+++..++.++.|++.||.|||+++|+||||||+||+++.    ++.+||+|||+++.+.
T Consensus       104 ~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842         104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence            5889999999999999999999999999999999999999    8999999999988653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.89  E-value=2.5e-22  Score=179.16  Aligned_cols=151  Identities=25%  Similarity=0.510  Sum_probs=131.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|+|+||.+|.+... ..++.+++|.+.....                                         
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~-~~~~~~~ik~~~~~~~-----------------------------------------   38 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSK-EDGKQYVIKEINISKM-----------------------------------------   38 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEc-CCCCEEEEEEEEhHhC-----------------------------------------
Confidence            5889999999999999999865 4578899998754211                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~  307 (362)
                                      .......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+.+....  .+++..
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  102 (256)
T cd08218          39 ----------------SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQ  102 (256)
T ss_pred             ----------------ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence                            11223457889999999999999999999999999999999999999999887543  478999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||++..+..
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218         103 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            999999999999999999999999999999999999999999999986643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=1.2e-22  Score=181.69  Aligned_cols=147  Identities=27%  Similarity=0.407  Sum_probs=126.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.+|+|+||.||++...  .+..+++|.+....                                        
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~--~~~~~~~k~~~~~~----------------------------------------   42 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN--GNTKVAVKTLKPGT----------------------------------------   42 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec--CCceeEEEEecCCC----------------------------------------
Confidence            467899999999999999999754  24568999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                          .....+.+|+.+++.++|||++++++++. ....|++|||+++++|.+++...  ..+++
T Consensus        43 --------------------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  101 (260)
T cd05070          43 --------------------MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKL  101 (260)
T ss_pred             --------------------CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCH
Confidence                                01234788999999999999999999875 45689999999999999998753  35899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++..+.
T Consensus       102 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~  153 (260)
T cd05070         102 PNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence            9999999999999999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.89  E-value=2e-22  Score=180.50  Aligned_cols=150  Identities=31%  Similarity=0.505  Sum_probs=132.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||+|+||.||.+... .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~~ik~~~~~~------------------------------------------   37 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNL-DTGELMAVKEIRIQD------------------------------------------   37 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEEC-CCCcEEEEEEEECcc------------------------------------------
Confidence            5888999999999999999854 457789999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                     ........+..|+.+++.++||||+++++.....+.+++++||+++++|.+++.....+++..+.
T Consensus        38 ---------------~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (264)
T cd06626          38 ---------------NDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIR  102 (264)
T ss_pred             ---------------cchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHH
Confidence                           11234466889999999999999999999999999999999999999999999887678999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus       103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626         103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            999999999999999999999999999999999999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=4.8e-23  Score=186.86  Aligned_cols=151  Identities=31%  Similarity=0.473  Sum_probs=132.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. ..++.+++|.+....                                       
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~a~k~~~~~~---------------------------------------   42 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHI-PTGTVMAKKVVHIGA---------------------------------------   42 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEc-CCCcEEEEEEEEecC---------------------------------------
Confidence            4567889999999999999999854 457789999875321                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                         .......+.+|+++++.++||||+++++.+.....+|+||||+++++|.+++.+.+.+++.
T Consensus        43 -------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  103 (284)
T cd06620          43 -------------------KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVE  103 (284)
T ss_pred             -------------------cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHH
Confidence                               1122356789999999999999999999999999999999999999999999887789999


Q ss_pred             HHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||++..+
T Consensus       104 ~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620         104 ILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence            999999999999999997 69999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0614|consensus

Probab=99.89  E-value=7.6e-24  Score=193.95  Aligned_cols=182  Identities=48%  Similarity=0.844  Sum_probs=157.4

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|+++ +++-|..+++++....|.+|++|++||+.|+.||||..|.|+|...+....++..+++++.||+|||
T Consensus       272 ~fLrsv~~~q~l-~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~FGE  350 (732)
T KOG0614|consen  272 NFLRSVPLFQNL-PEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDYFGE  350 (732)
T ss_pred             HHHHhhhhhccC-CHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccchhhH
Confidence            358999999999 9999999999999999999999999999999999999999999998876678899999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH------HhhhhhhhhhccccCcEEEEEec
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE------RRRLNEEFRSLRLSDLRVITTLG  158 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~lg  158 (362)
                      -||+....|+|+++|..+ +++|+.|+++.|.+++....++..+.+.....      ...+.+.+.+..+++++.+..||
T Consensus       351 ~al~~edvRtAniia~~~-gv~cl~lDresF~~liG~l~~l~ek~~~D~~r~A~~~~~~~~~~e~a~v~l~dl~~iaTLG  429 (732)
T KOG0614|consen  351 RALLGEDVRTANIIAQAP-GVECLTLDRESFKKLIGDLEELKEKDYGDEERRASVVIKEDFAEEFAQVKLSDLKRIATLG  429 (732)
T ss_pred             HHhhccCccchhhhccCC-CceEEEecHHHHHHhcccHHHhhhhhccchhhhhhhHHHHHHHhhhcccchhhhhhhhhcc
Confidence            999999999999999865 59999999999999999999888544432221      22333456677899999999999


Q ss_pred             ccceecEEEEEecCCCCCceeeeeecccccc
Q psy14740        159 VGGFGRVELVQIAGDPSRSFALKQMKKSQVM  189 (362)
Q Consensus       159 ~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~  189 (362)
                      -|+||.|.++..... ...+|+|+++|..+.
T Consensus       430 vGgFGRVELV~~~~~-~~~fAlKilkK~hIV  459 (732)
T KOG0614|consen  430 VGGFGRVELVKVNSQ-KATFALKILKKKHIV  459 (732)
T ss_pred             cCccceEEEEEeccc-chHHHHHHHhHhhcc
Confidence            999999999996644 336999999886443

>KOG0695|consensus

Probab=99.89  E-value=2.7e-23  Score=181.74  Aligned_cols=156  Identities=33%  Similarity=0.626  Sum_probs=136.7

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +.+.+|.+..+||.|+|+.|.++... .+.+.+|+|++++.-+                                     
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~-~t~qiyamkvvkkel~-------------------------------------  288 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDQIYAMKVVKKELV-------------------------------------  288 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehc-ccceeeehhhHHHHhc-------------------------------------
Confidence            46789999999999999999999865 5678999999987622                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                         .+.....-.+.|..+.... +||.++.++.+|+.+..+++|.||++||+|.-.+++++.+|
T Consensus       289 -------------------nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklp  349 (593)
T KOG0695|consen  289 -------------------NDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP  349 (593)
T ss_pred             -------------------CCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCc
Confidence                               1222233356677777665 89999999999999999999999999999999898888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.++++...|+.||.|||++|||+||+|.+|+|++..|++||+|+|+|+.-..
T Consensus       350 eeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  350 EEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             HHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            999999999999999999999999999999999999999999999999986543

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.89  E-value=9.5e-23  Score=182.34  Aligned_cols=144  Identities=38%  Similarity=0.728  Sum_probs=126.5

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      +|.|+||.||++... .+++.+++|.+.+...                                                
T Consensus         1 lg~g~~~~vy~~~~~-~~~~~~~~k~~~~~~~------------------------------------------------   31 (265)
T cd05579           1 ISKGAYGRVFLAKKK-STGDIYAIKVIKKADM------------------------------------------------   31 (265)
T ss_pred             CCCCCceEEEEEEEC-CCCCEEEEEEecchhh------------------------------------------------
Confidence            589999999999854 4578899998765311                                                


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV  316 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~  316 (362)
                              ........+.+|+.+++.++||||+++++.+..+...|++||++++++|.+++.+.+.+++..+..++.|++
T Consensus        32 --------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~  103 (265)
T cd05579          32 --------IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIV  103 (265)
T ss_pred             --------hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                    112334567889999999999999999999999999999999999999999998877899999999999999


Q ss_pred             HHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       317 ~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus       104 ~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~  144 (265)
T cd05579         104 LALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGL  144 (265)
T ss_pred             HHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence            99999999999999999999999999999999999887543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=1.5e-22  Score=183.15  Aligned_cols=151  Identities=28%  Similarity=0.452  Sum_probs=130.4

Q ss_pred             cCcEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+|++.+.+|+|+||.||++...   ...+..+|+|.+....                                      
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~--------------------------------------   45 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG--------------------------------------   45 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc--------------------------------------
Confidence            46788899999999999999854   2346789999876431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcC-C
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKG-N  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-~  302 (362)
                                         . ......+.+|+++++.++||||+++++++..  ....+++|||+++++|.+++.... .
T Consensus        46 -------------------~-~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~  105 (284)
T cd05038          46 -------------------E-EQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ  105 (284)
T ss_pred             -------------------c-hHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccc
Confidence                               0 0234568899999999999999999998876  567999999999999999997654 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+.
T Consensus       106 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            8999999999999999999999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.89  E-value=3.2e-22  Score=179.10  Aligned_cols=149  Identities=26%  Similarity=0.404  Sum_probs=127.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.+|+|+||.||++....  +..+++|.+.++.                                       
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~--~~~~~iK~~~~~~---------------------------------------   42 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGS---------------------------------------   42 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecC--CccEEEEecCCCh---------------------------------------
Confidence            45789999999999999999997442  4568888765421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           ...+.+.+|+.+++.++||||+++++.+.. ...|++|||+++++|.+++.+.  ..++
T Consensus        43 ---------------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~  100 (260)
T cd05073          43 ---------------------MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQP  100 (260)
T ss_pred             ---------------------hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccC
Confidence                                 112457889999999999999999999877 7789999999999999999763  3478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+..+..
T Consensus       101 ~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073         101 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            888999999999999999999999999999999999999999999999986643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.89  E-value=1.1e-22  Score=185.37  Aligned_cols=152  Identities=22%  Similarity=0.324  Sum_probs=129.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||.|+||.||++.+. .+++.+++|.+.....                                       
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~---------------------------------------   43 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDK-KTGEIVALKKLKMEKE---------------------------------------   43 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEEC-CCCcEEEEEEEeeccc---------------------------------------
Confidence            567889999999999999999865 4577899998754310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                        .......+.+|+.+++.++||||+++++++...  +..|++|||++ ++|.+++.... .++
T Consensus        44 ------------------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~  104 (293)
T cd07843          44 ------------------KEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFL  104 (293)
T ss_pred             ------------------cccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCC
Confidence                              111223467899999999999999999988777  88999999995 59988887643 589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       105 ~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843         105 QSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999999999999999999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.89  E-value=2.8e-22  Score=179.40  Aligned_cols=147  Identities=26%  Similarity=0.402  Sum_probs=125.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+...||+|+||.||++....  +..+++|.+....                                        
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~lK~~~~~~----------------------------------------   42 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNG--TTKVAIKTLKPGT----------------------------------------   42 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcC--CceEEEEEcccCC----------------------------------------
Confidence            3568999999999999999998543  3458888765421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~  305 (362)
                                          .....+.+|+.+++.++|||++++++++. .+..|++|||+++++|.+++....  .++.
T Consensus        43 --------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~  101 (260)
T cd05069          43 --------------------MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKL  101 (260)
T ss_pred             --------------------ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCH
Confidence                                11245778999999999999999999875 456899999999999999997532  4788


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~  153 (260)
T cd05069         102 PQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence            9999999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.89  E-value=1.5e-22  Score=180.61  Aligned_cols=144  Identities=28%  Similarity=0.414  Sum_probs=124.9

Q ss_pred             EecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        156 TLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      .+|+|+||.||++.+....+.  .+|+|.+.....                                             
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------------------------   36 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL---------------------------------------------   36 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCccc---------------------------------------------
Confidence            589999999999986543333  689998765410                                             


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFY  311 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~  311 (362)
                                   ......+.+|+.+++.++||||+++++.+.. ..++++|||+++++|.+++.+..  .+++..++.+
T Consensus        37 -------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  102 (257)
T cd05040          37 -------------SDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY  102 (257)
T ss_pred             -------------HHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHH
Confidence                         0345668899999999999999999999888 88999999999999999997754  5899999999


Q ss_pred             HHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       103 ~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040         103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             HHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccc
Confidence            99999999999999999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0604|consensus

Probab=99.89  E-value=2.4e-23  Score=179.48  Aligned_cols=146  Identities=36%  Similarity=0.501  Sum_probs=123.5

Q ss_pred             cccCcEEE-EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        147 RLSDLRVI-TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       147 ~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..++|.+- .+||-|-.|.|..+.+ +.+++.+|+|++.-.                                       
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~-k~T~ekfALKvL~Ds---------------------------------------   98 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVH-KRTQEKFALKVLLDS---------------------------------------   98 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEe-ccchhhhHHHHHhcC---------------------------------------
Confidence            35667665 5799999999999984 467899999987432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                               ....+|+++.-.. .|||||.++++|+.    ...+.+|||.++||.|.+.++.+
T Consensus        99 -------------------------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~  153 (400)
T KOG0604|consen   99 -------------------------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDR  153 (400)
T ss_pred             -------------------------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHc
Confidence                                     3356788775554 79999999999864    46789999999999999999887


Q ss_pred             CC--CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecC
Q psy14740        301 GN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~--l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~  357 (362)
                      +.  |++.++..|++||+.|+.|||+.+|.||||||+|+|...   +..+||+|||+|+.-.
T Consensus       154 g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  154 GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence            64  999999999999999999999999999999999999974   5579999999998754

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=4e-22  Score=177.24  Aligned_cols=151  Identities=28%  Similarity=0.470  Sum_probs=133.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.+|+|++|.+|.+.+. ..++.+++|.+.....                                         
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~-----------------------------------------   38 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNL-ETGDFVAIKQISLEKI-----------------------------------------   38 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEc-CCCcEEEEEEeccccc-----------------------------------------
Confidence            5788999999999999999855 4577899998865310                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                      .......+.+|+++++.++|||++++++++.+....+++||++++++|.+++.....+++..+.
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~  102 (254)
T cd06627          39 ----------------KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVA  102 (254)
T ss_pred             ----------------CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHH
Confidence                            1123456889999999999999999999999999999999999999999999887789999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.....
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  151 (254)
T cd06627         103 VYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLND  151 (254)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence            9999999999999999999999999999999999999999999987643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.89  E-value=3e-22  Score=179.48  Aligned_cols=151  Identities=28%  Similarity=0.456  Sum_probs=132.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.+|.|+||.||++... .++..+++|.+....                                         
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   38 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICL-PNNEKVAIKRIDLEK-----------------------------------------   38 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEc-CCCcEEEEEEeccCC-----------------------------------------
Confidence            47899999999999999999855 457789999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---CCCCH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---GNFDD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~  305 (362)
                                       .......+.+|+.+++.++||||+++++.+......|++||++++++|.+++...   ..+++
T Consensus        39 -----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~  101 (267)
T cd06610          39 -----------------CQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDE  101 (267)
T ss_pred             -----------------cchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCH
Confidence                             0113456789999999999999999999999999999999999999999999764   35899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..+..
T Consensus       102 ~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610         102 AIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            99999999999999999999999999999999999999999999999876654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.89  E-value=3.7e-22  Score=178.04  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=129.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.+|.|+||.||++.+..  +..+++|.+.....                                       
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~~~~~k~~~~~~~---------------------------------------   41 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWLE--KRKVAIKTIREGAM---------------------------------------   41 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEeC--CCeEEEEECCCCCC---------------------------------------
Confidence            4578999999999999999997542  56789998754310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                           ....+.+|+++++.++|||++++++++......+++|||+++++|.+++... ..+++.
T Consensus        42 ---------------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~  100 (256)
T cd05112          42 ---------------------SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQE  100 (256)
T ss_pred             ---------------------CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHH
Confidence                                 1234678999999999999999999999999999999999999999998764 458999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.|+.|||+++++|+||||+||+++.++.++|+|||+++....
T Consensus       101 ~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112         101 TLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeeccc
Confidence            9999999999999999999999999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.89  E-value=2.1e-22  Score=182.21  Aligned_cols=144  Identities=31%  Similarity=0.599  Sum_probs=119.0

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|+||.||++... .+++.+|+|.+.+....                                               
T Consensus         2 ig~g~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~-----------------------------------------------   33 (278)
T cd05606           2 IGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIK-----------------------------------------------   33 (278)
T ss_pred             cccCCCeEEEEEEEe-cCCCEEEEEEeeccccc-----------------------------------------------
Confidence            799999999999854 45789999988653110                                               


Q ss_pred             hhccccccccchhhhhhHHH---HHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSE---KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                               ..........|   ..+++...||+|+++++.+..++..|+||||++|++|.+++...+.+++..+..++.
T Consensus        34 ---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~  104 (278)
T cd05606          34 ---------MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAA  104 (278)
T ss_pred             ---------cchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHH
Confidence                     00000112223   334455689999999999999999999999999999999998777899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |++.||.|||+++++||||||+||+++.++.++|+|||+++.+.
T Consensus       105 ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606         105 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             HHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            99999999999999999999999999999999999999987553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1095|consensus

Probab=99.89  E-value=8.8e-23  Score=204.77  Aligned_cols=158  Identities=26%  Similarity=0.424  Sum_probs=138.0

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCC----ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSR----SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ..-....+...||+|.||.||.+...+.++.    .||+|.+.+.                                   
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-----------------------------------  733 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-----------------------------------  733 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-----------------------------------
Confidence            3445677889999999999999997765554    3788877543                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                             .+......|++|+.+|++++||||+++.++..+....+|++||++||+|..++++. 
T Consensus       734 -----------------------~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r  790 (1025)
T KOG1095|consen  734 -----------------------SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESR  790 (1025)
T ss_pred             -----------------------CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcc
Confidence                                   34456678999999999999999999999999999999999999999999999875 


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        301 ------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       301 ------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                            ..++..+...++.+++.|+.||+++++|||||...|+|++....+||+|||+|+.+....|
T Consensus       791 ~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~y  857 (1025)
T KOG1095|consen  791 PAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDY  857 (1025)
T ss_pred             cccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchh
Confidence                  2378899999999999999999999999999999999999999999999999997766554

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.89  E-value=1.9e-22  Score=179.90  Aligned_cols=145  Identities=24%  Similarity=0.459  Sum_probs=127.2

Q ss_pred             EecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        156 TLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      .||+|+||.||.+....  ..+..+++|.+....                                              
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----------------------------------------------   35 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA----------------------------------------------   35 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeecccc----------------------------------------------
Confidence            58999999999998654  226678999875431                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---------CCCC
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---------GNFD  304 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------~~l~  304 (362)
                                  .......+.+|+.++..++||||+++++++.....++++|||+++++|.+++...         ..++
T Consensus        36 ------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  103 (262)
T cd00192          36 ------------SEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLS  103 (262)
T ss_pred             ------------chhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCC
Confidence                        0113456889999999999999999999999999999999999999999999875         6789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.++....
T Consensus       104 ~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192         104 LKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999999999999999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG4279|consensus

Probab=99.89  E-value=5.5e-23  Score=194.42  Aligned_cols=143  Identities=30%  Similarity=0.554  Sum_probs=126.2

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      -+||+|+||+||.++ +.++....|||.+...                                                
T Consensus       581 vVLGKGTYG~VYA~R-D~~tqvrIaIKEIpek------------------------------------------------  611 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAAR-DMDTQVRIAIKEIPEK------------------------------------------------  611 (1226)
T ss_pred             EEeecCceeEEEeec-cccceeEEEeeecccc------------------------------------------------
Confidence            369999999999998 4466777899987543                                                


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCC--CHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNF--DDATTRFY  311 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l--~~~~~~~~  311 (362)
                                 ..+.-+.+..|+.+.+.++|.|||++.+++..++++-|.||-++||+|.+++.. -+++  ++..+-++
T Consensus       612 -----------dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fY  680 (1226)
T KOG4279|consen  612 -----------DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFY  680 (1226)
T ss_pred             -----------cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHH
Confidence                       233445678999999999999999999999999999999999999999999975 3677  79999999


Q ss_pred             HHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecC
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~  357 (362)
                      .+||++||.|||++.|+|||||-+|+|++ ..|.+||+|||.++++-
T Consensus       681 tkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA  727 (1226)
T KOG4279|consen  681 TKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA  727 (1226)
T ss_pred             HHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence            99999999999999999999999999998 48999999999999874

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.89  E-value=2.2e-22  Score=182.86  Aligned_cols=153  Identities=35%  Similarity=0.683  Sum_probs=131.4

Q ss_pred             CcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +|++.+.||.|+||.||++...+  ..+..+++|.+.+...                                       
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~---------------------------------------   41 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI---------------------------------------   41 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH---------------------------------------
Confidence            47889999999999999988543  3467899998865311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                      .........+..|+.++..+ +||||+++++.+......|+||||+++++|.+++.....+++.
T Consensus        42 ----------------~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  105 (288)
T cd05583          42 ----------------VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTES  105 (288)
T ss_pred             ----------------HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHH
Confidence                            01122335577899999999 6999999999999999999999999999999998877779999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  156 (288)
T cd05583         106 EVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL  156 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence            999999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=2.5e-22  Score=179.42  Aligned_cols=142  Identities=25%  Similarity=0.375  Sum_probs=122.7

Q ss_pred             EecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        156 TLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      .||+|+||.||++.....+  ...+++|.+....                                              
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~----------------------------------------------   35 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH----------------------------------------------   35 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEeccccc----------------------------------------------
Confidence            5899999999999765433  3678999875431                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                  .......+..|+.+++.++||||+++++++. .+..+++|||+++++|.+++.....+++..+..++.
T Consensus        36 ------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  102 (257)
T cd05060          36 ------------IAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAH  102 (257)
T ss_pred             ------------chHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHH
Confidence                        0123456788999999999999999999876 456899999999999999998877899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |++.||.|||.++++|+||||+||+++.++.++|+|||+++.+
T Consensus       103 qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060         103 QVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             HHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccccccee
Confidence            9999999999999999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.89  E-value=2.4e-22  Score=185.12  Aligned_cols=142  Identities=24%  Similarity=0.462  Sum_probs=116.2

Q ss_pred             EEecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        155 TTLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      ..||+|+||.||++.... ..+..+|+|.+....                                              
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----------------------------------------------   40 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----------------------------------------------   40 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC----------------------------------------------
Confidence            579999999999998543 345788999775321                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--ccceEEEEEeccCCcchHHHHHhc---------CC
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--DKKYLYMLMESCLGGELWTILRDK---------GN  302 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~---------~~  302 (362)
                                     ....+.+|+.+++.++||||+++++++.  .+..+|++|||+ +++|.+++...         ..
T Consensus        41 ---------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~  104 (317)
T cd07867          41 ---------------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA-EHDLWHIIKFHRASKANKKPMQ  104 (317)
T ss_pred             ---------------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee-CCcHHHHHHhhhccccCCCCcc
Confidence                           1123678999999999999999999874  456789999998 56887776421         24


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe----cCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~----~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||+|+.+..
T Consensus       105 l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07867         105 LPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence            7889999999999999999999999999999999999    4567899999999986643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.89  E-value=1.2e-22  Score=188.77  Aligned_cols=150  Identities=24%  Similarity=0.432  Sum_probs=128.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|.+.+.||.|+||.||++... .+++.+++|.+....                                         
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~~valK~~~~~~-----------------------------------------   42 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDT-RSGKKVAIKKIPHAF-----------------------------------------   42 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEc-CCCCEEEEEEecccc-----------------------------------------
Confidence            67899999999999999999855 457889999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                      ........+.+|+.+++.++||||+++++++..    ...+|+||||+ +++|.+++...+.++
T Consensus        43 ----------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~  105 (334)
T cd07855          43 ----------------DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM-ESDLHHIIHSDQPLT  105 (334)
T ss_pred             ----------------ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehh-hhhHHHHhccCCCCC
Confidence                            011223456789999999999999999998753    35789999999 578999998777799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855         106 EEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS  158 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence            99999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG4645|consensus

Probab=99.89  E-value=1.1e-23  Score=211.01  Aligned_cols=153  Identities=30%  Similarity=0.472  Sum_probs=135.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      -+|.-...+|.|.||.||-+.+. ++|+-.|+|.++..+                                         
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~-~tGellAvKEI~iq~----------------------------------------- 1272 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNL-DTGELLAVKEIKIQD----------------------------------------- 1272 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecC-CccchhhhhhhhcCc-----------------------------------------
Confidence            45677778999999999999844 678999999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                      ........+.+|..++..++|||++++|++-.+.+.++|.||||++|+|.+++...+..++...
T Consensus      1273 ----------------~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt 1336 (1509)
T KOG4645|consen 1273 ----------------SDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVT 1336 (1509)
T ss_pred             ----------------cccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHH
Confidence                            1123345578899999999999999999999999999999999999999999988777899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +.+..|++.|+.|||++|||||||||.||+++.+|.+|++|||.|..+.++
T Consensus      1337 ~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1337 RVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            999999999999999999999999999999999999999999999988654

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.89  E-value=2.6e-22  Score=178.43  Aligned_cols=141  Identities=27%  Similarity=0.441  Sum_probs=122.3

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||+|+||.||++...  .+..+++|.+...                                                 
T Consensus         2 ~ig~g~~g~vy~~~~~--~~~~~a~K~~~~~-------------------------------------------------   30 (250)
T cd05085           2 LLGKGNFGEVFKGTLK--DKTPVAVKTCKED-------------------------------------------------   30 (250)
T ss_pred             ccCCCCCceEEEEEec--CCcEEEEEecCCc-------------------------------------------------
Confidence            5899999999999743  3678999987542                                                 


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~q  314 (362)
                               ........+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++... ..+++..+..++.|
T Consensus        31 ---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  101 (250)
T cd05085          31 ---------LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALD  101 (250)
T ss_pred             ---------CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence                     01122345788999999999999999999999999999999999999999988753 35789999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.||.|+|++|++|+||||+||+++.++.++|+|||++...
T Consensus       102 i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  143 (250)
T cd05085         102 AAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQE  143 (250)
T ss_pred             HHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceec
Confidence            999999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.89  E-value=4.3e-22  Score=177.47  Aligned_cols=151  Identities=26%  Similarity=0.418  Sum_probs=129.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.||+|+||.||++... .+++.+++|.+.....                                         
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~-----------------------------------------   38 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRK-ADQKLVIIKQIPVEQM-----------------------------------------   38 (256)
T ss_pred             CceEEEEecccCceEEEEEEEc-CCCcEEEEEEEecccc-----------------------------------------
Confidence            5889999999999999999865 4678899998754311                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                      .......+.+|+.+++.++|||++++++.+...+..++||||+++++|.+++...  ..+++..
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08220          39 ----------------TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDT  102 (256)
T ss_pred             ----------------ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHH
Confidence                            1123456788999999999999999999999999999999999999999999764  3489999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.+|.|||++|++|+||||+||+++.+ +.++|+|||++..+..
T Consensus       103 ~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220         103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            99999999999999999999999999999999865 4689999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=1.6e-22  Score=182.62  Aligned_cols=106  Identities=21%  Similarity=0.237  Sum_probs=95.5

Q ss_pred             hhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       251 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ..+.+|+.+++.++||||+++++++..+...|+||||+++++|..++.+ .+.+++..+..++.|++.||.|||+++|+|
T Consensus        61 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH  140 (274)
T cd05076          61 LAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVH  140 (274)
T ss_pred             HHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccC
Confidence            4577889999999999999999999999999999999999999998875 356899999999999999999999999999


Q ss_pred             ecCCCCcEEecCCC-------cEEEEecccceec
Q psy14740        330 RDLKPENLLLSTSG-------YVKLVDFGFAKKL  356 (362)
Q Consensus       330 rDikp~NIl~~~~~-------~~kl~DFG~a~~~  356 (362)
                      |||||+||+++..+       .++++|||++...
T Consensus       141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076         141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             CCCCcccEEEeccCcccCccceeeecCCcccccc
Confidence            99999999997643       4899999987644

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.89  E-value=4.5e-22  Score=181.07  Aligned_cols=149  Identities=30%  Similarity=0.471  Sum_probs=127.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+...+|+|+||.||++... .+++.+++|.+....                                        
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~-~~~~~~aik~~~~~~----------------------------------------   59 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNK-KDGSLAAVKILDPIS----------------------------------------   59 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEecccc----------------------------------------
Confidence            578999999999999999999854 457889999875321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHh--
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRD--  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~--  299 (362)
                                          .....+..|+.+++.+ +|||++++++++...     +.+|+||||+++++|.++++.  
T Consensus        60 --------------------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~  119 (291)
T cd06639          60 --------------------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLL  119 (291)
T ss_pred             --------------------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhh
Confidence                                1123456788888888 899999999987643     468999999999999998763  


Q ss_pred             --cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 --KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 --~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                        ...+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.+.
T Consensus       120 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         120 ICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence              3468999999999999999999999999999999999999999999999999987654

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.89  E-value=2.1e-22  Score=184.51  Aligned_cols=152  Identities=22%  Similarity=0.373  Sum_probs=125.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCC----ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSR----SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ....+|+..+.||+|+||.||++.+... ++    .+++|.+....                                  
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~-~~~~~~~vaiK~~~~~~----------------------------------   48 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPE-GETVKIPVAIKILNETT----------------------------------   48 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecC-CCcceeeEEEEeccccC----------------------------------
Confidence            3567889999999999999999986533 33    45777654320                                  


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                              .......+.+|+.+++.++||||+++++++... ..+++++|+++|+|.+++....
T Consensus        49 ------------------------~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~  103 (303)
T cd05110          49 ------------------------GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHK  103 (303)
T ss_pred             ------------------------CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcc
Confidence                                    111223577899999999999999999988654 4778999999999999987644


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 -NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 -~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       .+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.+.
T Consensus       104 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110         104 DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence             58999999999999999999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=1.7e-22  Score=180.40  Aligned_cols=107  Identities=20%  Similarity=0.267  Sum_probs=98.1

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNII  328 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~al~~lH~~~ii  328 (362)
                      ...+.+|+.+++.++||||+++++++.. +..+++|||+++++|.+++.... .++...+..++.|++.||.|||++||+
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  123 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLV  123 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence            4567889999999999999999998877 77899999999999999998765 689999999999999999999999999


Q ss_pred             eecCCCCcEEecCCC-------cEEEEecccceecC
Q psy14740        329 YRDLKPENLLLSTSG-------YVKLVDFGFAKKLI  357 (362)
Q Consensus       329 HrDikp~NIl~~~~~-------~~kl~DFG~a~~~~  357 (362)
                      ||||||+||+++.++       .++|+|||+++.+.
T Consensus       124 H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~  159 (259)
T cd05037         124 HGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL  159 (259)
T ss_pred             cccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence            999999999999887       79999999998743

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0984|consensus

Probab=99.89  E-value=4.1e-23  Score=169.37  Aligned_cols=150  Identities=29%  Similarity=0.536  Sum_probs=126.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++...+..||.|+||.|.+.++. .++...|+|.+.-.                                          
T Consensus        46 d~L~~i~elGrGayG~vekmrh~-~sg~imAvKri~~t------------------------------------------   82 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHI-QSGTIMAVKRIRAT------------------------------------------   82 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeec-cCCeEEEEeeehhh------------------------------------------
Confidence            44455677999999999998865 56888999987532                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHH----hcCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR----DKGNF  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----~~~~l  303 (362)
                                      .....+.+.++|+++... ..+|.++++|+.+.....+|+.||.+ ..||..+.+    ..+..
T Consensus        83 ----------------vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~tSldkfy~~v~~~g~~i  145 (282)
T KOG0984|consen   83 ----------------VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DTSLDKFYRKVLKKGGTI  145 (282)
T ss_pred             ----------------cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hhhHHHHHHHHHhcCCcC
Confidence                            224456677888887655 48999999999999999999999999 778877654    45679


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..+-+++..++.||.|||++ .+||||+||+|||++.+|++|+||||++..+.+
T Consensus       146 pE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  146 PEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             chHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            9999999999999999999976 899999999999999999999999999987754

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.89  E-value=3.1e-22  Score=187.35  Aligned_cols=151  Identities=23%  Similarity=0.362  Sum_probs=126.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   53 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDT-VTGQNVAIKKLSRPF---------------------------------------   53 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEEC-CCCCEEEEEecCccc---------------------------------------
Confidence            3578999999999999999999855 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ...|+||||+ .++|.+.+...
T Consensus        54 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~  114 (353)
T cd07850          54 ------------------QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD  114 (353)
T ss_pred             ------------------cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEecc-CCCHHHHHhhc
Confidence                              1112234567899999999999999999987543      3579999999 56888887653


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                        +++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++....
T Consensus       115 --l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850         115 --LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence              89999999999999999999999999999999999999999999999999987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.89  E-value=3e-22  Score=181.16  Aligned_cols=153  Identities=16%  Similarity=0.231  Sum_probs=129.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC---CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD---PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .-++|.+.+.||+|+||.||.+.+...   .+..+++|.+...                                     
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-------------------------------------   46 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-------------------------------------   46 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-------------------------------------
Confidence            346789999999999999999997652   2567888876421                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                           ........+.+|+.+++.++||||+++++++.. +...+++++|+++++|.+++...  
T Consensus        47 ---------------------~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~  105 (280)
T cd05043          47 ---------------------ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRL  105 (280)
T ss_pred             ---------------------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccc
Confidence                                 112234567889999999999999999997654 57799999999999999998653  


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 ------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                            ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.+||+|||+++.+.
T Consensus       106 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~  168 (280)
T cd05043         106 GEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLF  168 (280)
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCccccc
Confidence                  348899999999999999999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.88  E-value=3.6e-22  Score=180.93  Aligned_cols=147  Identities=25%  Similarity=0.432  Sum_probs=127.0

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.||.|++|.||++.+. .++..+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~------------------------------------------   37 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNR-TTGEIVALKEIHLDA------------------------------------------   37 (284)
T ss_pred             CceEeeeeccCCceEEEEEEEC-CCCeEEEEEEecccc------------------------------------------
Confidence            5889999999999999999854 457889999876431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc---CCCCHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---GNFDDA  306 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~  306 (362)
                                      .......+.+|+.+++.++||||+++++.+.+.+..++||||++ ++|.+++...   ..+++.
T Consensus        38 ----------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~  100 (284)
T cd07836          38 ----------------EEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPN  100 (284)
T ss_pred             ----------------cccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCCCCCcCHH
Confidence                            01122446679999999999999999999999999999999996 5888887653   358999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++.+
T Consensus       101 ~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836         101 TVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence            99999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.88  E-value=4.4e-22  Score=178.15  Aligned_cols=150  Identities=30%  Similarity=0.546  Sum_probs=134.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||.|+||.||++.+.. +++.+++|.+....                                         
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~vk~~~~~~-----------------------------------------   38 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKP-TGKIYALKKIHVDG-----------------------------------------   38 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcC-CCcEEEEEEeccCc-----------------------------------------
Confidence            468899999999999999998664 67889999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       .......+..|+..+..++|||++++++++.....++++|||+++++|.+++.....+++..+
T Consensus        39 -----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  101 (264)
T cd06623          39 -----------------DEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVL  101 (264)
T ss_pred             -----------------chHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHH
Confidence                             012345688999999999999999999999999999999999999999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||.+..+.
T Consensus       102 ~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~  151 (264)
T cd06623         102 AYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE  151 (264)
T ss_pred             HHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            9999999999999999 999999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.88  E-value=2.6e-22  Score=180.69  Aligned_cols=105  Identities=26%  Similarity=0.480  Sum_probs=96.6

Q ss_pred             hhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC----------------CCCHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG----------------NFDDATTRFYT  312 (362)
Q Consensus       250 ~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~l~~~~~~~~~  312 (362)
                      ...+.+|+.++..+ +||||+++++++...+.+|++|||+++++|.+++....                .++...+..++
T Consensus        39 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (270)
T cd05047          39 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  118 (270)
T ss_pred             HHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence            34578899999999 89999999999999999999999999999999987532                37889999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .|++.||+|||++|++||||||+||+++.++.++|+|||+++
T Consensus       119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            999999999999999999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.88  E-value=2.6e-22  Score=180.52  Aligned_cols=106  Identities=17%  Similarity=0.212  Sum_probs=96.7

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----GNFDDATTRFYTACVVEAFDYLHSR  325 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~ql~~al~~lH~~  325 (362)
                      ...+.+|+.+++.++||||+++++.+......|+||||+++++|.+++.+.    ...+...+..++.|++.||.|||++
T Consensus        39 ~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~  118 (268)
T cd05086          39 QNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH  118 (268)
T ss_pred             HHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            456889999999999999999999999999999999999999999998753    2356778889999999999999999


Q ss_pred             CcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      +++||||||+|||++.++.++|+|||++..
T Consensus       119 ~i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086         119 NFLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             CeeccCCccceEEEcCCccEEecccccccc
Confidence            999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=4.3e-22  Score=179.16  Aligned_cols=151  Identities=27%  Similarity=0.390  Sum_probs=127.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -.+|.+.+.+|.|+||.||++.+...  ....+++|......                                      
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--------------------------------------   46 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--------------------------------------   46 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--------------------------------------
Confidence            45688999999999999999986432  23468888764320                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                          .....+.+.+|+.+++.++||||+++++++.+ ...|++|||+++++|.+++.... .++
T Consensus        47 --------------------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~  105 (270)
T cd05056          47 --------------------SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLD  105 (270)
T ss_pred             --------------------CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCC
Confidence                                11234567889999999999999999998875 45789999999999999997644 589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056         106 LASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence            99999999999999999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.88  E-value=4e-22  Score=180.51  Aligned_cols=149  Identities=28%  Similarity=0.533  Sum_probs=123.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                         
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~-----------------------------------------   38 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHV-PTGTIMAVKRIRATV-----------------------------------------   38 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEc-CCCcEEEEEEEecCC-----------------------------------------
Confidence            47899999999999999999855 458899999875420                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHH-HhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNF  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l  303 (362)
                                       .......+..|..+ ++..+||||+++++++..++..|++|||+ .++|.+++..    ...+
T Consensus        39 -----------------~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~  100 (283)
T cd06617          39 -----------------NSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM-DTSLDKFYKKVYDKGLTI  100 (283)
T ss_pred             -----------------CcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh-cccHHHHHHHhccCCCCC
Confidence                             00112234455554 56679999999999999999999999999 4788877754    2358


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.+.
T Consensus       101 ~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617         101 PEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            9999999999999999999997 99999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.88  E-value=3.2e-22  Score=178.38  Aligned_cols=145  Identities=28%  Similarity=0.434  Sum_probs=125.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+.+|.+.+.+|+|+||.||.+..   .++.+++|.+...                                        
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~---~~~~~~iK~~~~~----------------------------------------   40 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEY---TGQKVAVKNIKCD----------------------------------------   40 (254)
T ss_pred             cHHHceeeeeeccCCCCceEeccc---CCCceEEEeecCc----------------------------------------
Confidence            457799999999999999998763   4667899976431                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~  304 (362)
                                           .....+.+|+.+++.++|||++++++++..+ ..+++|||+++++|.+++....  .++
T Consensus        41 ---------------------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~   98 (254)
T cd05083          41 ---------------------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVS   98 (254)
T ss_pred             ---------------------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCC
Confidence                                 0124578899999999999999999998654 4799999999999999987643  478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++..
T Consensus        99 ~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          99 VIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceec
Confidence            9999999999999999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.88  E-value=4.2e-22  Score=182.97  Aligned_cols=153  Identities=24%  Similarity=0.401  Sum_probs=128.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||.|+||.||++... .+++.+|+|.+.....                                      
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~-~~~~~vaiK~~~~~~~--------------------------------------   45 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDT-TSGEIVALKKVRMDNE--------------------------------------   45 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEEC-CCCcEEEEEEEEeccC--------------------------------------
Confidence            4688999999999999999999855 5678899998754210                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                         .........+|+.+++.++||||+++++++...  +.+|+||||++ ++|.+++... ..+
T Consensus        46 -------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l  105 (309)
T cd07845          46 -------------------RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPF  105 (309)
T ss_pred             -------------------CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcccCC
Confidence                               011122356799999999999999999998654  56899999995 5888887753 568


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+..
T Consensus       106 ~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845         106 SESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            9999999999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.88  E-value=6.8e-22  Score=180.20  Aligned_cols=150  Identities=24%  Similarity=0.399  Sum_probs=125.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||.|.+|.||++.+. .+++.+++|.+....                                        
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~----------------------------------------   39 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDR-VTNETIALKKIRLEQ----------------------------------------   39 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEec-CCCcEEEEEehhhcc----------------------------------------
Confidence            367999999999999999999865 457889999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC--CCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~  305 (362)
                                       ........+.+|+.+++.++||||+++++++.....+|+||||++ ++|.+.+.....  +++
T Consensus        40 -----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~  101 (294)
T PLN00009         40 -----------------EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNP  101 (294)
T ss_pred             -----------------ccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCH
Confidence                             011123457789999999999999999999999999999999994 688887765433  578


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||+++++|+||+|+||+++. ++.+||+|||++...
T Consensus       102 ~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009        102 RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            889999999999999999999999999999999985 567999999999754

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.4e-22  Score=181.23  Aligned_cols=150  Identities=28%  Similarity=0.495  Sum_probs=131.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.+|.|+||.||++... .+++.+++|.+....                                         
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   38 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDK-RTNQVVAIKVIDLEE-----------------------------------------   38 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEEC-CCCeEEEEEEeeccc-----------------------------------------
Confidence            36788899999999999999855 457889999875321                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       .......+.+|+.+++.++||||+++++.+.++..+|+++||+++++|.+++... ++++..+
T Consensus        39 -----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~  100 (274)
T cd06609          39 -----------------AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYI  100 (274)
T ss_pred             -----------------cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHH
Confidence                             1122345778999999999999999999999999999999999999999998764 7899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||+++.+..
T Consensus       101 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609         101 AFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            99999999999999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.88  E-value=3.7e-22  Score=183.07  Aligned_cols=152  Identities=24%  Similarity=0.423  Sum_probs=126.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++...||+|+||.||++... .+++.+|+|.+....                                       
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~aik~~~~~~---------------------------------------   49 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHK-KTKQIVALKKVLMEN---------------------------------------   49 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEEC-CCCcEEEEEEEeccC---------------------------------------
Confidence            4678999999999999999999855 457889999875321                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--------ceEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--------KYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~  298 (362)
                                        ........+.+|+.+++.++||||+++++++...        ...|+||||+ +++|.+++.
T Consensus        50 ------------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~  110 (310)
T cd07865          50 ------------------EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFC-EHDLAGLLS  110 (310)
T ss_pred             ------------------CcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCC-CcCHHHHHH
Confidence                              0011123356799999999999999999987654        3469999999 568888776


Q ss_pred             hcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        299 DKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~~~-~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ... .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+.
T Consensus       111 ~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865         111 NKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             hcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence            543 68999999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=3.1e-22  Score=170.69  Aligned_cols=169  Identities=16%  Similarity=0.061  Sum_probs=115.3

Q ss_pred             EEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        154 ITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       154 ~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      ...||+|+||.||++.+.  +++.+|+|++.+...-....   +                     ..+........    
T Consensus         2 ~~~ig~G~~~~Vy~a~~~--~g~~vavKv~~~~~~~~~~~---~---------------------~~~~~~~~~~~----   51 (190)
T cd05145           2 NGCISTGKEANVYHARTG--DGEELAVKIYKTSTLSFKDR---D---------------------KYIEGDPRFRS----   51 (190)
T ss_pred             CceeecCCCcEEEEEEcC--CCCEEEEEEEEcCcceEeeH---H---------------------HHhcCCccccc----
Confidence            457999999999999855  58899999997652100000   0                     00000000000    


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                           .................|...+..+.|+++.....+....  .|+||||++|+++........+++...+..++.
T Consensus        52 -----~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~  124 (190)
T cd05145          52 -----RYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYE  124 (190)
T ss_pred             -----ccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHH
Confidence                 0000000001122346799999999999875554443332  489999998876554433345688899999999


Q ss_pred             HHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        314 CVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       314 ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      |++.++.++|+ +||+||||||+||+++ ++.++|+|||+|+.+..+.
T Consensus       125 ~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~~~  171 (190)
T cd05145         125 QVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDHPN  171 (190)
T ss_pred             HHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCCCC
Confidence            99999999999 9999999999999998 8899999999999876553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.4e-22  Score=178.79  Aligned_cols=145  Identities=35%  Similarity=0.622  Sum_probs=121.0

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      +.+|.|+||.||++... ..++.+|+|.+.+...                                              
T Consensus         2 ~~l~~g~~~~v~~a~~~-~~~~~vavK~~~~~~~----------------------------------------------   34 (260)
T cd05611           2 KPISKGAFGSVYLAKKR-STGDYFAIKVLKKSDM----------------------------------------------   34 (260)
T ss_pred             ccCCcCCCeeEEEEEec-CCCCeEEEEEecchhh----------------------------------------------
Confidence            46899999999999854 4578899998765311                                              


Q ss_pred             hhhhccccccccchhhhhhHHHHHHH-hhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                ........+..|..++ ...+|||++++++++...+.+|++|||+++++|.+++...+.+++..+..++.
T Consensus        35 ----------~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~  104 (260)
T cd05611          35 ----------IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIA  104 (260)
T ss_pred             ----------hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHH
Confidence                      0011112234454444 34589999999999999999999999999999999998877899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |++.||.|||+.+++|+||+|+||+++.++.++|+|||+++..
T Consensus       105 qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  147 (260)
T cd05611         105 EVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG  147 (260)
T ss_pred             HHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence            9999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.88  E-value=5.2e-22  Score=182.21  Aligned_cols=152  Identities=26%  Similarity=0.376  Sum_probs=128.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|.....+|+|+||.||.+... .+++.+++|.+....                                        
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~v~iK~~~~~~----------------------------------------   52 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDV-RTNEVVAIKKMSYSG----------------------------------------   52 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEc-CCCcEEEEEEEeccc----------------------------------------
Confidence            356888999999999999999855 457889999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~  306 (362)
                                      .........+.+|+++++.++||||+++++++...+..|+||||++ +++.+++.. ...+++.
T Consensus        53 ----------------~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~  115 (307)
T cd06607          53 ----------------KQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEV  115 (307)
T ss_pred             ----------------cCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHH
Confidence                            1112233557889999999999999999999999999999999995 677776653 4568999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus       116 ~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607         116 EIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            999999999999999999999999999999999999999999999987553

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.88  E-value=4.8e-22  Score=179.66  Aligned_cols=148  Identities=28%  Similarity=0.468  Sum_probs=128.5

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      -|+....||.|+||.||++... .++..+|+|.+....                                          
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~-~~~~~~aiK~~~~~~------------------------------------------   41 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEE------------------------------------------   41 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEEC-CCCcEEEEEEecccc------------------------------------------
Confidence            3667788999999999999854 457789999864321                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                      .......+.+|+.+++.++||||+++++.+..++..|+||||+++++|.+++.. ..+++..+.
T Consensus        42 ----------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~  104 (277)
T cd06641          42 ----------------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIA  104 (277)
T ss_pred             ----------------chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHH
Confidence                            112235678899999999999999999999999999999999999999998865 468999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.|++.|+.+||+.|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06641         105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  152 (277)
T ss_pred             HHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence            999999999999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.88  E-value=3.2e-22  Score=180.86  Aligned_cols=150  Identities=29%  Similarity=0.473  Sum_probs=130.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|+.++.||.|+||.||.+.+. ..+..+|+|.+....                                         
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~-~~~~~vaiK~~~~~~-----------------------------------------   41 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDN-RTQQVVAIKIIDLEE-----------------------------------------   41 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEc-cCCEEEEEEEEeccc-----------------------------------------
Confidence            34677788999999999999855 457789999875321                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       .......+.+|+.+++.++||||+++++.+.++...|+||||+++++|.+++.. +++++..+
T Consensus        42 -----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~  103 (277)
T cd06640          42 -----------------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQI  103 (277)
T ss_pred             -----------------cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHH
Confidence                             112335688899999999999999999999999999999999999999998865 56899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|+|+.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus       104 ~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640         104 ATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            99999999999999999999999999999999999999999999976643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.88  E-value=3.6e-22  Score=180.95  Aligned_cols=149  Identities=25%  Similarity=0.407  Sum_probs=127.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+.++.||.|+||.||++... .+++.+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~------------------------------------------   37 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDT------------------------------------------   37 (284)
T ss_pred             CceeeeeecCCCceEEEEEEEC-CCCCEEEEEEccccc------------------------------------------
Confidence            4789999999999999999854 457889999875321                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~  307 (362)
                                     ........+.+|+++++.++||||+++++++.+.+..|++|||+. ++|..++...  ..+++..
T Consensus        38 ---------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~  101 (284)
T cd07860          38 ---------------ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPL  101 (284)
T ss_pred             ---------------cccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHH
Confidence                           011122457889999999999999999999999999999999994 6888887653  4589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860         102 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            99999999999999999999999999999999999999999999987553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.88  E-value=7.2e-22  Score=179.99  Aligned_cols=150  Identities=20%  Similarity=0.356  Sum_probs=124.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++... .+++.+++|.+....                                         
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~-~~~~~v~lK~~~~~~-----------------------------------------   38 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDK-NTGKLVALKKTRLEM-----------------------------------------   38 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEEC-CCCcEEEEEeehhhc-----------------------------------------
Confidence            46899999999999999999865 457889999865421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccce-----EEEEEeccCCcchHHHHHhc--
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKY-----LYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                      ........+.+|+.+++.+ +||||+++++++...+.     .|++|||+++ +|.+++...  
T Consensus        39 ----------------~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~  101 (295)
T cd07837          39 ----------------DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGR  101 (295)
T ss_pred             ----------------cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcc
Confidence                            0111234577899999999 46999999998876655     8999999965 888887642  


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceecC
Q psy14740        301 ---GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ---~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~  357 (362)
                         ..+++..++.++.|++.||.|||++|++||||||+||+++. ++.++|+|||+++.+.
T Consensus       102 ~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~  162 (295)
T cd07837         102 GPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS  162 (295)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecC
Confidence               34799999999999999999999999999999999999998 8899999999998653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.88  E-value=8.2e-22  Score=177.17  Aligned_cols=148  Identities=30%  Similarity=0.499  Sum_probs=126.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.......+|+|+||.||++.+. .++..+++|.+...                                          
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~v~~k~~~~~------------------------------------------   44 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDL-STQVRIAIKEIPER------------------------------------------   44 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEec-CCCcEEEEEEecCC------------------------------------------
Confidence            34445568999999999999855 45778999976542                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC--CH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF--DD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l--~~  305 (362)
                                       .....+.+.+|+.+++.++||||+++++++..++..++++||+++++|.+++... ..+  ++
T Consensus        45 -----------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  107 (268)
T cd06624          45 -----------------DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNE  107 (268)
T ss_pred             -----------------CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcH
Confidence                             1122346788999999999999999999999999999999999999999998764 445  88


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++. ++.++|+|||++..+
T Consensus       108 ~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624         108 QTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            889999999999999999999999999999999976 679999999998765

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.88  E-value=5.3e-22  Score=180.97  Aligned_cols=149  Identities=28%  Similarity=0.437  Sum_probs=129.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.+|+|+||.||++... .+++.+++|.+...+                                        
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~----------------------------------------   56 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDV-ATGQEVAIKQMNLQQ----------------------------------------   56 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEc-CCCCEEEEEEecccc----------------------------------------
Confidence            578999999999999999999854 346789999864321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++.+...+..|+|+||+++++|.+++.+ ..++...
T Consensus        57 -------------------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~  116 (293)
T cd06647          57 -------------------QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQ  116 (293)
T ss_pred             -------------------chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHH
Confidence                               11234578899999999999999999999999999999999999999999875 3588999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+.
T Consensus       117 ~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~  166 (293)
T cd06647         117 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             HHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence            99999999999999999999999999999999999999999999887553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.88  E-value=1.2e-22  Score=182.04  Aligned_cols=148  Identities=31%  Similarity=0.521  Sum_probs=130.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.||.|+||.||++.+. .+++.+++|.+....                                          
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~ik~~~~~~------------------------------------------   38 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHR-PTGKIMAVKTIRLEI------------------------------------------   38 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEc-CCCcEEEEEEEeccc------------------------------------------
Confidence            5677888999999999999865 457889999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~  308 (362)
                                      .......+.+|+++++.++||||+++++.+.....+++++||+++++|.+++... ..+++..+
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (265)
T cd06605          39 ----------------NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERIL  102 (265)
T ss_pred             ----------------ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHH
Confidence                            1123456788999999999999999999999999999999999999999999875 67899999


Q ss_pred             HHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.|++.||.|+|+ .|++|+||||+||+++.++.++|+|||.+..+
T Consensus       103 ~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~  151 (265)
T cd06605         103 GKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             HHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhh
Confidence            9999999999999999 99999999999999999999999999998755

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.88  E-value=6.3e-22  Score=176.99  Aligned_cols=151  Identities=29%  Similarity=0.494  Sum_probs=128.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++...+|.|+||.||++.+.. +++.+++|.+....                                          
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~------------------------------------------   37 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS-DGKILVWKEIDYGN------------------------------------------   37 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC-CCCEEEEEEEeccc------------------------------------------
Confidence            58889999999999999998654 57789999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--ccceEEEEEeccCCcchHHHHHh----cCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--DKKYLYMLMESCLGGELWTILRD----KGNF  303 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~----~~~l  303 (362)
                                     ........+..|+.+++.++||||+++++.+.  .....|++|||+++++|.+++..    ..++
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l  102 (265)
T cd08217          38 ---------------MTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI  102 (265)
T ss_pred             ---------------CCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCC
Confidence                           11223456788999999999999999999764  34568999999999999999875    3468


Q ss_pred             CHHHHHHHHHHHHHHHHHHH-----HCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLH-----SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH-----~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..++.++.|++.||.|+|     +.+++|+||||+||+++.++.++|+|||++..+..
T Consensus       103 ~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~  162 (265)
T cd08217         103 EEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH  162 (265)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence            99999999999999999999     99999999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=4.6e-22  Score=179.61  Aligned_cols=149  Identities=26%  Similarity=0.417  Sum_probs=128.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .|+..+.+|.|+||.||++.+. .+++.+++|.+....                                          
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~-~~~~~~~iK~~~~~~------------------------------------------   38 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHV-PTGRVVALKIINLDT------------------------------------------   38 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEc-CCCcEEEEEEecCCC------------------------------------------
Confidence            4677889999999999999865 457889999875420                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcC---CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN---CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                      .......+.+|+.+++.+.   |||++++++++......|++|||+++++|.+++.. +.+++.
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~  101 (277)
T cd06917          39 ----------------PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEK  101 (277)
T ss_pred             ----------------CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHH
Confidence                            1112345678888988886   99999999999999999999999999999998865 478999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+..
T Consensus       102 ~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917         102 YISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            9999999999999999999999999999999999999999999999987643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.88  E-value=3.4e-22  Score=179.91  Aligned_cols=147  Identities=23%  Similarity=0.432  Sum_probs=125.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+...+|+|+||.||.+... ..++.+|+|.+...                                          
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~------------------------------------------   42 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVT------------------------------------------   42 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEc-CCCcEEEEEEEEcC------------------------------------------
Confidence            45777888999999999999855 45788999987532                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHhc-
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                        ......+..|+.++..+ +||||+++++.+..      ...+|++|||+++++|.+++... 
T Consensus        43 ------------------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~  104 (272)
T cd06637          43 ------------------GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK  104 (272)
T ss_pred             ------------------CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhcc
Confidence                              01124567889999888 79999999998864      24689999999999999998863 


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                       ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||+++.+
T Consensus       105 ~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637         105 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence             35899999999999999999999999999999999999999999999999999765

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.88  E-value=6.1e-22  Score=176.10  Aligned_cols=142  Identities=28%  Similarity=0.432  Sum_probs=124.1

Q ss_pred             EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchh
Q psy14740        156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  235 (362)
Q Consensus       156 ~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~  235 (362)
                      .||.|+||.||.+....  ++.+++|.+.....                                               
T Consensus         2 ~lg~g~~g~v~~~~~~~--~~~v~~K~~~~~~~-----------------------------------------------   32 (251)
T cd05041           2 KIGKGNFGDVYKGVLKG--NTEVAVKTCRSTLP-----------------------------------------------   32 (251)
T ss_pred             ccccCCCceEEEEEEeC--CCcEEEEeccccCC-----------------------------------------------
Confidence            58999999999998543  78899998754310                                               


Q ss_pred             hhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHH
Q psy14740        236 SERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTAC  314 (362)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~q  314 (362)
                                 ......+..|+++++.++||||+++++++......|++|||+++++|.+++... ..++...+..++.|
T Consensus        33 -----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  101 (251)
T cd05041          33 -----------PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLD  101 (251)
T ss_pred             -----------HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence                       123356788999999999999999999999999999999999999999998653 45889999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|||+++++||||||+||+++.++.++|+|||+++...
T Consensus       102 ~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041         102 AAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            9999999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.88  E-value=5.7e-22  Score=184.88  Aligned_cols=151  Identities=21%  Similarity=0.380  Sum_probs=127.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-++|++...||+|+||.||++... .++..+|+|.+.+..                                       
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   52 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDR-RTGAKVAIKKLYRPF---------------------------------------   52 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEEC-CCCcEEEEEEecccc---------------------------------------
Confidence            3567999999999999999999854 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------eEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++....      .+++||+++ +++|.+++.. 
T Consensus        53 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-  112 (343)
T cd07880          53 ------------------QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-  112 (343)
T ss_pred             ------------------cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-
Confidence                              11122345778999999999999999999886543      469999998 8899888764 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       113 ~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880         113 EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence            579999999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=1e-21  Score=178.44  Aligned_cols=150  Identities=34%  Similarity=0.563  Sum_probs=127.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|..++.+|.|++|.||.+.... +++.+++|.+....                                         
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~-----------------------------------------   38 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKN-TGMIFALKTITTDP-----------------------------------------   38 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECC-CCeEEEEEEEecCC-----------------------------------------
Confidence            468899999999999999999654 57889999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHh----cCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRD----KGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~  302 (362)
                                       .......+.+|+++++.++||||+++++++..  .+.+|++|||+++++|.+++..    ...
T Consensus        39 -----------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  101 (287)
T cd06621          39 -----------------NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGR  101 (287)
T ss_pred             -----------------chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCC
Confidence                             11234567889999999999999999998754  3478999999999999887653    245


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus       102 l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621         102 IGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            8899999999999999999999999999999999999999999999999987543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00284 protein kinase; Provisional

Probab=99.88  E-value=7.4e-22  Score=191.59  Aligned_cols=146  Identities=23%  Similarity=0.348  Sum_probs=118.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.||+|+||.||++.+. ..++.||+|++....                                        
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~-~~~~~vAvK~i~~~~----------------------------------------  166 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDR-KRKEYCAVKIVRNVP----------------------------------------  166 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEc-CCCeEEEEEEEecch----------------------------------------
Confidence            478999999999999999999865 457889999885321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc------CCcceeeeeeeeecc-ceEEEEEeccCCcchHHHHHhc
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA------NCDFIVKLYKTFKDK-KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                          ........|+.++..+      +|++++++++++..+ .++|+||+++ +++|.+++.+.
T Consensus       167 --------------------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~  225 (467)
T PTZ00284        167 --------------------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH  225 (467)
T ss_pred             --------------------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc
Confidence                                0112234455555554      455689999888754 5789999998 88999988887


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCC----------------cEEEEeccccee
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSG----------------YVKLVDFGFAKK  355 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~----------------~~kl~DFG~a~~  355 (362)
                      +.+++..+..++.|++.||.|||+ .||+||||||+|||++.++                .+||+|||.+..
T Consensus       226 ~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        226 GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            889999999999999999999998 5999999999999998765                499999998754

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.88  E-value=2e-22  Score=183.68  Aligned_cols=145  Identities=26%  Similarity=0.493  Sum_probs=125.0

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.....||.|+||.||++... .++..+++|.+...                                            
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~-~~~~~vaiK~~~~~--------------------------------------------   58 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEK-HTGKQVAVKKMDLR--------------------------------------------   58 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEEC-CCCCEEEEEEEecc--------------------------------------------
Confidence            333466999999999999854 45778999986432                                            


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF  310 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  310 (362)
                                     .......+.+|+.+++.++||||+++++.+..++..|++|||+++++|.+++.. +.+++..+..
T Consensus        59 ---------------~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~  122 (292)
T cd06658          59 ---------------KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAT  122 (292)
T ss_pred             ---------------hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHH
Confidence                           112234578899999999999999999999999999999999999999998754 4689999999


Q ss_pred             HHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       311 ~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.|++.||.|||+++|+||||||+||+++.++.++|+|||++..+
T Consensus       123 ~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658         123 VCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence            9999999999999999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.88  E-value=1.3e-21  Score=174.16  Aligned_cols=151  Identities=32%  Similarity=0.578  Sum_probs=132.2

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.+|.|+||.||.+.+.. +++.+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~------------------------------------------   37 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS-DGKLYVLKEIDLSN------------------------------------------   37 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC-CCcEEEEEEeeccc------------------------------------------
Confidence            58899999999999999999654 57789999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----CCCCH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----GNFDD  305 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~  305 (362)
                                     ........+.+|+++++.++|||++++++.+...+..++++|++++++|.+++...    ..+++
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  102 (258)
T cd08215          38 ---------------MSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPE  102 (258)
T ss_pred             ---------------CChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCH
Confidence                           11233455788999999999999999999999999999999999999999998764    56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus       103 ~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215         103 EQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            99999999999999999999999999999999999999999999999986544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.88  E-value=8.4e-22  Score=177.25  Aligned_cols=144  Identities=25%  Similarity=0.396  Sum_probs=119.6

Q ss_pred             cCcEEEEEe--cccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        149 SDLRVITTL--GVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       149 ~~~~~~~~l--g~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ++|.+.+.+  |+|+||.||++... .++..+++|.+.+....                                     
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~~~k~~~~~~~~-------------------------------------   55 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHK-PTQKLFVQKIIKAKNFN-------------------------------------   55 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEc-CCCcEEEEEEEehhhcc-------------------------------------
Confidence            455555554  99999999999855 45778999987543100                                     


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                                 ..|......+ +||||+++++.+..++.+|+||||+++++|.+++.....+++
T Consensus        56 ---------------------------~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~  108 (267)
T PHA03390         56 ---------------------------AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSE  108 (267)
T ss_pred             ---------------------------hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCH
Confidence                                       0122222222 799999999999999999999999999999999988778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+.|++||||||+||+++.++ .++|+|||+++...
T Consensus       109 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390        109 AEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence            99999999999999999999999999999999999988 99999999987654

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.88  E-value=8.4e-22  Score=177.45  Aligned_cols=150  Identities=25%  Similarity=0.337  Sum_probs=123.6

Q ss_pred             cEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      |++.+.||+|+||.||++....  .+++.+|+|.+...                                          
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~------------------------------------------   38 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKAD------------------------------------------   38 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccc------------------------------------------
Confidence            5677889999999999998653  34678999987542                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------eEEEEEeccCCcchHHHHHhc--
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                     .........+.+|+.+++.++||||+++++++....      ..+++++|+++++|..++...  
T Consensus        39 ---------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  103 (273)
T cd05074          39 ---------------IFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRI  103 (273)
T ss_pred             ---------------cCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcc
Confidence                           112223456788999999999999999999875432      357899999999998876432  


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 ----GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ----~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                          ..++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         104 GEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccccccc
Confidence                147889999999999999999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=5.8e-22  Score=177.76  Aligned_cols=106  Identities=20%  Similarity=0.245  Sum_probs=95.9

Q ss_pred             hhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       251 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ..+..|+.+++.++||||+++++++..+...+++|||+++++|..++... ..+++..+..++.|++.||.|||+++|+|
T Consensus        49 ~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  128 (262)
T cd05077          49 LAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVH  128 (262)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeEC
Confidence            45778899999999999999999999888999999999999998888753 46899999999999999999999999999


Q ss_pred             ecCCCCcEEecCCCc-------EEEEecccceec
Q psy14740        330 RDLKPENLLLSTSGY-------VKLVDFGFAKKL  356 (362)
Q Consensus       330 rDikp~NIl~~~~~~-------~kl~DFG~a~~~  356 (362)
                      |||||+|||++.++.       ++++|||++..+
T Consensus       129 ~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077         129 GNVCTKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             CCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            999999999987654       899999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.88  E-value=7.1e-22  Score=176.03  Aligned_cols=148  Identities=26%  Similarity=0.465  Sum_probs=131.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.+|+|+||.||++.... +++.+++|.+....                                         
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~-----------------------------------------   40 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKE-TGQVVAIKVVPVEE-----------------------------------------   40 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcC-CCcEEEEEEeecHH-----------------------------------------
Confidence            578899999999999999998653 46789999874320                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                          ....+.+|+.+++.++||||+++++.+.....+|+++|++++++|.+++.. ...+++..
T Consensus        41 --------------------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~  100 (256)
T cd06612          41 --------------------DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEE  100 (256)
T ss_pred             --------------------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHH
Confidence                                145688999999999999999999999999999999999999999999875 34689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus       101 ~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612         101 IAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            999999999999999999999999999999999999999999999886643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG1163|consensus

Probab=99.88  E-value=5.7e-22  Score=166.31  Aligned_cols=151  Identities=23%  Similarity=0.353  Sum_probs=130.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +....|++++.||+|+||++|++.... +++.||||+-...                                       
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~-~ge~VAiK~Es~~---------------------------------------   51 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISIT-SGEEVAIKLESSK---------------------------------------   51 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeecc-CCceEEEEeeccc---------------------------------------
Confidence            467899999999999999999999664 5889999986543                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHHHH-hcCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l  303 (362)
                                            ....++..|..+...+++ ..|+.+..+..+.++-.+|||++ |.||.+++. +.+.+
T Consensus        52 ----------------------a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~f  108 (341)
T KOG1163|consen   52 ----------------------AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRF  108 (341)
T ss_pred             ----------------------CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhh
Confidence                                  223457789999988864 78999999998999999999999 999999887 44679


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~~  359 (362)
                      +..++...+.|++.-++|+|.+++|||||||+|+|..-   ...+.|+|||+|+++.+.
T Consensus       109 tmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~  167 (341)
T KOG1163|consen  109 TMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI  167 (341)
T ss_pred             hHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence            99999999999999999999999999999999999974   356899999999987543

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.88  E-value=6e-22  Score=184.27  Aligned_cols=152  Identities=21%  Similarity=0.418  Sum_probs=128.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+...||.|+||.||.+.+. .+++.+++|.+.+..                                        
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~-~~~~~vaiK~~~~~~----------------------------------------   42 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNS-ETNEKVAIKKIANAF----------------------------------------   42 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEec-CCCCeEEEEEecccc----------------------------------------
Confidence            357999999999999999999855 568899999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                       ........+.+|+.+++.++||||+++++++...     ...|++|||+ +++|.+++...+.
T Consensus        43 -----------------~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~  104 (337)
T cd07858          43 -----------------DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELM-DTDLHQIIRSSQT  104 (337)
T ss_pred             -----------------cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCC-CCCHHHHHhcCCC
Confidence                             0111223466899999999999999999987544     3589999999 5789999988778


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++....
T Consensus       105 l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858         105 LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            99999999999999999999999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.88  E-value=6.9e-22  Score=183.79  Aligned_cols=149  Identities=21%  Similarity=0.408  Sum_probs=125.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||.+.+. .+++.+|+|.+....                                        
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~-~~~~~vaiK~~~~~~----------------------------------------   42 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHK-PTGVKVAIKKISPFE----------------------------------------   42 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEc-CCCCeEEEEEecccc----------------------------------------
Confidence            468999999999999999999855 457889999875320                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                        .......+.+|+.+++.++||||+++++++...     ...|+++||+ +++|.+.+.. +.
T Consensus        43 ------------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~  102 (336)
T cd07849          43 ------------------HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELM-ETDLYKLIKT-QH  102 (336)
T ss_pred             ------------------cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhc-ccCHHHHHhc-CC
Confidence                              111234467899999999999999999876543     3589999999 4688887754 56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       103 l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849         103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            9999999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0196|consensus

Probab=99.88  E-value=2.2e-22  Score=192.63  Aligned_cols=154  Identities=25%  Similarity=0.369  Sum_probs=136.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..+..++.++||.|+||+|+.......  ....||||.++-+                                      
T Consensus       627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--------------------------------------  668 (996)
T KOG0196|consen  627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--------------------------------------  668 (996)
T ss_pred             ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC--------------------------------------
Confidence            345668889999999999999986543  2357899998765                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                          .....+..|+.|+.||.+.+||||+++.++.-....+.||+||+++|+|..+++.+ +.|
T Consensus       669 --------------------ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqf  728 (996)
T KOG0196|consen  669 --------------------YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQF  728 (996)
T ss_pred             --------------------ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCce
Confidence                                23455678999999999999999999999998888999999999999999999865 569


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.-+++-|+.|+.||-+.+++||||...|||++.+-.+|++|||++|.+.+
T Consensus       729 tviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled  783 (996)
T KOG0196|consen  729 TVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  783 (996)
T ss_pred             EeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence            9999999999999999999999999999999999999999999999999998854

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.87  E-value=9.9e-22  Score=182.42  Aligned_cols=150  Identities=25%  Similarity=0.383  Sum_probs=124.6

Q ss_pred             CcEEEEEecccceecEEEEEecCC-CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGD-PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +|++.+.||+|+||.||++..... .+..+|+|.+....                                         
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-----------------------------------------   39 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-----------------------------------------   39 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-----------------------------------------
Confidence            478999999999999999996532 16789999875320                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                      ......+.+.+|+.+++.+ +||||+++++....    ...+|++++++ +++|.+++.....+
T Consensus        40 ----------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~  102 (332)
T cd07857          40 ----------------SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELM-EADLHQIIRSGQPL  102 (332)
T ss_pred             ----------------ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecc-cCCHHHHHhcCCCC
Confidence                            0111234577899999998 69999999986432    24689999998 57999998877789


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.+.
T Consensus       103 ~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857         103 TDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS  156 (332)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence            999999999999999999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.87  E-value=8.2e-22  Score=176.44  Aligned_cols=108  Identities=22%  Similarity=0.313  Sum_probs=95.5

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeee-ccceEEEEEeccCCcchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFK-DKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNI  327 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~al~~lH~~~i  327 (362)
                      ...+.+|+.+++.++||||+++++++. .++..+++|||+.+++|.+++.+.. ..+...+..++.|++.||.|||+.++
T Consensus        40 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  119 (262)
T cd05058          40 VEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF  119 (262)
T ss_pred             HHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            356788999999999999999999754 4567899999999999999997643 46777888899999999999999999


Q ss_pred             EeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       328 iHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +||||||+||+++.++.++|+|||+++.+.
T Consensus       120 ~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058         120 VHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             cccccCcceEEEcCCCcEEECCcccccccc
Confidence            999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.87  E-value=2.1e-22  Score=181.96  Aligned_cols=147  Identities=27%  Similarity=0.470  Sum_probs=127.0

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |+..+.||+|+||.||.+.+. ..++.+++|.+....                                           
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~-~~~~~vaiK~~~~~~-------------------------------------------   41 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDN-RTKEVVAIKIIDLEE-------------------------------------------   41 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEc-CCCeEEEEEEecccc-------------------------------------------
Confidence            445566899999999999854 457789999875321                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF  310 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  310 (362)
                                     .......+.+|+.+++.++||||+++++++..+...|+||||+++++|.+++.. +.+++..+..
T Consensus        42 ---------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~  105 (277)
T cd06642          42 ---------------AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIAT  105 (277)
T ss_pred             ---------------chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHH
Confidence                           112235678999999999999999999999999999999999999999998864 5689999999


Q ss_pred             HHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       311 ~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||+++.+.
T Consensus       106 ~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06642         106 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             HHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEcccccccccc
Confidence            99999999999999999999999999999999999999999997654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.87  E-value=7.2e-22  Score=180.60  Aligned_cols=152  Identities=26%  Similarity=0.434  Sum_probs=127.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.+|+|+||.||++... .+++.+++|.+....                                       
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~---------------------------------------   44 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDK-DTGELVALKKVRLDN---------------------------------------   44 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEEC-CCCcEEEEEEEeecc---------------------------------------
Confidence            4578999999999999999999965 457789999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----------eEEEEEeccCCcchHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----------YLYMLMESCLGGELWTI  296 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----------~~~lv~e~~~~~~L~~~  296 (362)
                                        ........+.+|+.+++.++||||+++++++.+..          .+|++|||+++ ++..+
T Consensus        45 ------------------~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~  105 (302)
T cd07864          45 ------------------EKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGL  105 (302)
T ss_pred             ------------------cccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHH
Confidence                              00112234677999999999999999999887654          79999999965 77776


Q ss_pred             HHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        297 LRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       297 l~~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+||+|||+++.+.
T Consensus       106 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  167 (302)
T cd07864         106 LESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYN  167 (302)
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccccc
Confidence            6653 468999999999999999999999999999999999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.87  E-value=4.2e-22  Score=182.03  Aligned_cols=144  Identities=29%  Similarity=0.496  Sum_probs=124.5

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      .....+|.|+||.||.+... .+++.+++|.+....                                            
T Consensus        24 ~~~~~ig~g~~g~v~~~~~~-~~~~~v~iK~~~~~~--------------------------------------------   58 (297)
T cd06659          24 ENYIKIGEGSTGIVCIAREK-HSGRQVAVKMMDLRK--------------------------------------------   58 (297)
T ss_pred             HhhhhcCCCCceeEEEEEEc-CCCCEEEEEEEEecc--------------------------------------------
Confidence            33446899999999999854 457789999874321                                            


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY  311 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~  311 (362)
                                     ......+.+|+.+++.++||||+++++.+..++..|++|||+++++|..++.. ..+++..+..+
T Consensus        59 ---------------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~  122 (297)
T cd06659          59 ---------------QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATV  122 (297)
T ss_pred             ---------------cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHH
Confidence                           11234477899999999999999999999999999999999999999987755 56899999999


Q ss_pred             HHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+
T Consensus       123 ~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~  167 (297)
T cd06659         123 CESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI  167 (297)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence            999999999999999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.87  E-value=1.2e-21  Score=174.48  Aligned_cols=150  Identities=25%  Similarity=0.405  Sum_probs=129.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||++.+. .+++.+++|.+.....                                         
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~-----------------------------------------   38 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRL-SDNQFYALKEVDLGSM-----------------------------------------   38 (256)
T ss_pred             CceEeeeecCCCceeEEEEEEC-CCCCEEEEEEEehhhc-----------------------------------------
Confidence            5889999999999999999855 4577899998764310                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCCCH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFDD  305 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~  305 (362)
                                      .......+.+|+.+++.++||||+++++++......|++|||+++++|.+++.+    ...+++
T Consensus        39 ----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08530          39 ----------------SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPE  102 (256)
T ss_pred             ----------------cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCH
Confidence                            112234567899999999999999999999999999999999999999998866    245899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus       103 ~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530         103 QEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK  154 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence            9999999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=2.8e-22  Score=179.33  Aligned_cols=108  Identities=17%  Similarity=0.167  Sum_probs=97.0

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNII  328 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~al~~lH~~~ii  328 (362)
                      ...+..|..+++.++||||+++++++..++..++||||+++++|.+++..++ .+++.....++.|++.||.|||++||+
T Consensus        43 ~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii  122 (258)
T cd05078          43 SESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLT  122 (258)
T ss_pred             HHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            3457789999999999999999999999889999999999999999997654 589999999999999999999999999


Q ss_pred             eecCCCCcEEecCCCc--------EEEEecccceecC
Q psy14740        329 YRDLKPENLLLSTSGY--------VKLVDFGFAKKLI  357 (362)
Q Consensus       329 HrDikp~NIl~~~~~~--------~kl~DFG~a~~~~  357 (362)
                      ||||||+||+++.++.        ++++|||++....
T Consensus       123 H~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078         123 HGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             cCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            9999999999987654        6999999986543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.1e-21  Score=176.39  Aligned_cols=149  Identities=26%  Similarity=0.470  Sum_probs=128.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.+|.|+||.||++.... .++.+++|.+....                                       
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~---------------------------------------   43 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKK-TGQLVAIKIMDIIE---------------------------------------   43 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECC-CCcEEEEEEEecCc---------------------------------------
Confidence            35789999999999999999998653 47789999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHh
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                           .....+.+|+.+++.+ +||||+++++++...      ..+|++|||+++++|.+++..
T Consensus        44 ---------------------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  102 (275)
T cd06608          44 ---------------------DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKG  102 (275)
T ss_pred             ---------------------hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHH
Confidence                                 1234578899999998 799999999998653      458999999999999998865


Q ss_pred             ----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        300 ----KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       300 ----~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                          ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++...
T Consensus       103 ~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608         103 LRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             HhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence                346899999999999999999999999999999999999999999999999998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.87  E-value=6.6e-22  Score=183.30  Aligned_cols=151  Identities=22%  Similarity=0.425  Sum_probs=130.7

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++...||.|+||.||++... .+++.+++|.+.+..                                          
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~-~~~~~~~iK~~~~~~------------------------------------------   37 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDK-RTGRKVAIKKISNVF------------------------------------------   37 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeC-CCCcEEEEEeecccc------------------------------------------
Confidence            5889999999999999999854 457889999875421                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                     ......+.+.+|+.+++.++||||+++++++...+     .+|++|+|++ ++|.+++.+...++
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~  101 (330)
T cd07834          38 ---------------DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLT  101 (330)
T ss_pred             ---------------ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCCCCC
Confidence                           11223356788999999999999999999987765     7999999995 68999998777899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....+
T Consensus       102 ~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834         102 DDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            9999999999999999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0584|consensus

Probab=99.87  E-value=1.5e-22  Score=190.13  Aligned_cols=151  Identities=23%  Similarity=0.339  Sum_probs=126.2

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      +....||+|+|-+||++.+. ..+-.||=-.++-.+                                            
T Consensus        43 k~~evLGrGafKtVYka~De-~~giEVAWnqvk~~d--------------------------------------------   77 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDE-EEGIEVAWNQVKIRD--------------------------------------------   77 (632)
T ss_pred             ehhhhcccccceeeeecccc-ccchhhHHHHHhHHH--------------------------------------------
Confidence            45567999999999999854 456555533222211                                            


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--eEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                 ........+++..|+.+|+.|+||||+++|++|.+.+  .+.+|+|++..|+|..|+++.+..+...++
T Consensus        78 -----------~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik  146 (632)
T KOG0584|consen   78 -----------VTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIK  146 (632)
T ss_pred             -----------hhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHH
Confidence                       2233455688999999999999999999999998765  488999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC--cEeecCCCCcEEecC-CCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRN--IIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~~  358 (362)
                      .|++||+.||.|||++.  |||||||-+||+|+. -|.|||+|+|+|.....
T Consensus       147 ~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  147 SWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             HHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            99999999999999985  999999999999985 58999999999975543

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.2e-21  Score=173.94  Aligned_cols=145  Identities=45%  Similarity=0.807  Sum_probs=127.5

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      +|.|+||.||.+... ..++.+++|.+.+..                                                 
T Consensus         1 lg~G~~~~v~~~~~~-~~~~~~~~k~~~~~~-------------------------------------------------   30 (250)
T cd05123           1 LGKGSFGKVLLVRKK-DTGKLYAMKVLKKKK-------------------------------------------------   30 (250)
T ss_pred             CCCCCceEEEEEEEC-CCCcEEEEEEeehhh-------------------------------------------------
Confidence            689999999999865 457889999886541                                                 


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV  316 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~  316 (362)
                             .........+..|+.+++.++||||+++++.+..+...|++||++++++|.+++.....+++..+..++.|++
T Consensus        31 -------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~  103 (250)
T cd05123          31 -------IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIV  103 (250)
T ss_pred             -------hcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                   1111234567889999999999999999999999999999999999999999998877899999999999999


Q ss_pred             HHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       317 ~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .||.|+|+++++|+||+|+||+++.++.++|+|||++.....
T Consensus       104 ~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123         104 LALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.87  E-value=3e-21  Score=171.80  Aligned_cols=152  Identities=31%  Similarity=0.467  Sum_probs=133.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|+..+.+|+|++|.||.+.... +++.+++|.+....                                          
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~------------------------------------------   37 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD-TGELMAVKSVELSG------------------------------------------   37 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC-CCcEEEEEEeeccc------------------------------------------
Confidence            47888999999999999998653 57789999875431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     ......+.+.+|+.+++.++||||+++++.+...  ..+++++|++++++|.+++.+...+++..
T Consensus        38 ---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  102 (260)
T cd06606          38 ---------------DSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV  102 (260)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHH
Confidence                           0122346678999999999999999999999888  89999999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||.+......
T Consensus       103 ~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606         103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            9999999999999999999999999999999999999999999999877544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.87  E-value=2.3e-21  Score=180.89  Aligned_cols=150  Identities=21%  Similarity=0.403  Sum_probs=126.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-++|.+.+.||+|+||.||++... .+++.+|+|.+.+..                                       
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   54 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPF---------------------------------------   54 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEc-CCCeEEEEEEecCcc---------------------------------------
Confidence            3478999999999999999999854 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...      ...|++++++ +++|.+++.. 
T Consensus        55 ------------------~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-  114 (345)
T cd07877          55 ------------------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-  114 (345)
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc-
Confidence                              0111234567899999999999999999987543      3478899987 8899888765 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       115 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877         115 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence            46999999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.87  E-value=1.8e-21  Score=176.34  Aligned_cols=150  Identities=25%  Similarity=0.425  Sum_probs=128.9

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.+|.|+||.||++... .+++.+++|.+....                                           
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~-~~~~~~~~K~~~~~~-------------------------------------------   36 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNK-KTGELVALKKIRMEN-------------------------------------------   36 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEEC-CCCeEEEEEEEeccc-------------------------------------------
Confidence            678899999999999999855 457789999886531                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc-CCCCHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-GNFDDAT  307 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~  307 (362)
                                    ........+.+|+.+++.++|||++++++++...  +..|++|||++ ++|.+++... ..+++..
T Consensus        37 --------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~  101 (287)
T cd07840          37 --------------EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTESQ  101 (287)
T ss_pred             --------------ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCCHHH
Confidence                          0112234577899999999999999999999887  89999999995 5898888764 4799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus       102 ~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840         102 IKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9999999999999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG4721|consensus

Probab=99.87  E-value=1.5e-22  Score=187.80  Aligned_cols=141  Identities=24%  Similarity=0.409  Sum_probs=125.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ++...-.+-||+|+-|.||+.+..   ++.||||.++.-                                         
T Consensus       123 Fe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV~el-----------------------------------------  158 (904)
T KOG4721|consen  123 FEEISELEWLGSGAQGAVFLGRLH---NETVAVKKVREL-----------------------------------------  158 (904)
T ss_pred             HHHhhhhhhhccCcccceeeeecc---CceehhHHHhhh-----------------------------------------
Confidence            333334455999999999999854   678999976431                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                               -..++..|++++||||+.+.+++...-.++||||||+.|.|..+++....++...
T Consensus       159 -------------------------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~l  213 (904)
T KOG4721|consen  159 -------------------------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSL  213 (904)
T ss_pred             -------------------------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHH
Confidence                                     2457888999999999999999999999999999999999999999988999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++.+.
T Consensus       214 lv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~  263 (904)
T KOG4721|consen  214 LVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS  263 (904)
T ss_pred             HHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence            99999999999999999999999999999999999999999999998664

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.87  E-value=1.4e-21  Score=181.59  Aligned_cols=162  Identities=20%  Similarity=0.335  Sum_probs=130.2

Q ss_pred             cCcEE-EEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        149 SDLRV-ITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       149 ~~~~~-~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ++|.. ...||.|+||.||++.+. ..++.+|+|.+..........                                  
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~----------------------------------   52 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDT-LTGKIVAIKKVKIIEISNDVT----------------------------------   52 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEEC-CCCCeEEEEEeeccccccccc----------------------------------
Confidence            45554 467999999999999855 457889999886542110000                                  


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                 +.............+.+|+.+++.++||||+++++++..++..+++|||++ ++|.+++.....+++..
T Consensus        53 -----------~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~  120 (335)
T PTZ00024         53 -----------KDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQ  120 (335)
T ss_pred             -----------cchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHH
Confidence                       000001111222357789999999999999999999999999999999995 69999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||+++.+.
T Consensus       121 ~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        121 VKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence            99999999999999999999999999999999999999999999998765

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.87  E-value=4.4e-21  Score=169.94  Aligned_cols=150  Identities=30%  Similarity=0.580  Sum_probs=132.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.+|+|++|.||++.... +++.+++|.+....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~------------------------------------------   37 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKR-TGKEVAIKVIKLES------------------------------------------   37 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECC-CCcEEEEEEecccc------------------------------------------
Confidence            57888999999999999999654 57789999875531                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATT  308 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~  308 (362)
                                       ......+.+|+++++.++|||++++++.+......++++||+++++|.+++... ..+++..+
T Consensus        38 -----------------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~  100 (253)
T cd05122          38 -----------------KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQI  100 (253)
T ss_pred             -----------------hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHH
Confidence                             123456788999999999999999999999999999999999999999998775 57899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus       101 ~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122         101 AYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            999999999999999999999999999999999999999999999876543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.87  E-value=2.2e-21  Score=174.41  Aligned_cols=160  Identities=29%  Similarity=0.422  Sum_probs=129.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++...||+|+||.||.+.....+++.+++|.+........                                      
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~--------------------------------------   42 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFG--------------------------------------   42 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccc--------------------------------------
Confidence            477888999999999999997765678899998754311000                                      


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~  304 (362)
                                 ............+.+|+.++.. ++||||+++++++...+..+++|||+++++|.+++..    ...++
T Consensus        43 -----------~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~  111 (269)
T cd08528          43 -----------KDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFT  111 (269)
T ss_pred             -----------cccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCC
Confidence                       0011122334556778888865 7999999999999999999999999999999988743    24589


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus       112 ~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  166 (269)
T cd08528         112 EERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP  166 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccc
Confidence            99999999999999999996 7899999999999999999999999999976543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG4257|consensus

Probab=99.87  E-value=4.9e-22  Score=186.09  Aligned_cols=148  Identities=26%  Similarity=0.408  Sum_probs=127.2

Q ss_pred             EEecccceecEEEEEecCC-CC--CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        155 TTLGVGGFGRVELVQIAGD-PS--RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~-~~--~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      +.||.|.||.||.+..... .+  -.||||..+..                                             
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d---------------------------------------------  429 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD---------------------------------------------  429 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccC---------------------------------------------
Confidence            4699999999999986543 22  35777776542                                             


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHHHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRF  310 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~  310 (362)
                                   ......+.|+.|+.+|++++||||+++++++.+. ..|||||+++-|.|..+++.++ .++......
T Consensus       430 -------------~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~l  495 (974)
T KOG4257|consen  430 -------------CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTL  495 (974)
T ss_pred             -------------CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHH
Confidence                         1223467799999999999999999999998654 5999999999999999998765 589999999


Q ss_pred             HHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       311 ~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ++.|++.||.|||+...+||||-..|||+.+...+||+|||++|.+....|
T Consensus       496 y~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y  546 (974)
T KOG4257|consen  496 YCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY  546 (974)
T ss_pred             HHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence            999999999999999999999999999999999999999999998876654

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.87  E-value=1.6e-21  Score=178.96  Aligned_cols=152  Identities=24%  Similarity=0.419  Sum_probs=125.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.+++|.+....                                       
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~---------------------------------------   45 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQI-KTGRVVALKKILMHN---------------------------------------   45 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEEecc---------------------------------------
Confidence            3689999999999999999999855 457789999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--------ceEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--------KYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~  298 (362)
                                        ..........+|+++++.++||||+++++.+...        ..+|++|+|+. +++...+.
T Consensus        46 ------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~  106 (311)
T cd07866          46 ------------------EKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLE  106 (311)
T ss_pred             ------------------CCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHh
Confidence                              0011123456899999999999999999876433        35799999984 56777665


Q ss_pred             h-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        299 D-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~-~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      . ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++...
T Consensus       107 ~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866         107 NPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence            4 3469999999999999999999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.87  E-value=2.9e-21  Score=179.01  Aligned_cols=150  Identities=21%  Similarity=0.389  Sum_probs=127.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||.|+||.||++... .+++.+++|.+.+..                                       
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   47 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQ-LTGQNVAIKKIMKPF---------------------------------------   47 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEEC-CCCCEEEEEEecccc---------------------------------------
Confidence            3567999999999999999999855 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        ........+..|+.+++.++||||+++++++.. ...+|++|||+ +++|.++++. .++++
T Consensus        48 ------------------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~  107 (328)
T cd07856          48 ------------------STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTS-RPLEK  107 (328)
T ss_pred             ------------------cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc-CCCCH
Confidence                              011123456789999999999999999998865 56789999998 6789888764 46888


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++...
T Consensus       108 ~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856         108 QFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            999999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.87  E-value=3e-21  Score=177.99  Aligned_cols=151  Identities=26%  Similarity=0.398  Sum_probs=127.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|.....||+|+||.||++... .++..+++|.+....                                         
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~-~~~~~valK~~~~~~-----------------------------------------   62 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDV-RTNEVVAIKKMSYSG-----------------------------------------   62 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEc-CCCcEEEEEEEecCC-----------------------------------------
Confidence            34677888999999999999855 457889999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                     .........+.+|+.+++.++|||++++++++..+...|+||||++ ++|.+++.. ..++++..
T Consensus        63 ---------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~  126 (317)
T cd06635          63 ---------------KQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE  126 (317)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcCCCCHHH
Confidence                           1112233567889999999999999999999999999999999995 577776654 45689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus       127 ~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         127 IAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            99999999999999999999999999999999999999999999886543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.87  E-value=2.1e-21  Score=175.88  Aligned_cols=148  Identities=23%  Similarity=0.422  Sum_probs=126.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|++.+.+|.|+||.||++.+. ..++.+++|.+...                                         
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~a~K~~~~~-----------------------------------------   52 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHV-KTGQLAAIKVMDVT-----------------------------------------   52 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEc-CCCcEEEEEEEecC-----------------------------------------
Confidence            478899999999999999999865 45778999986432                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeee------ccceEEEEEeccCCcchHHHHHhc
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFK------DKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~------~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                         ......+..|+.+++.+ +||||+++++++.      ..+.+|++|||+++++|.+++...
T Consensus        53 -------------------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~  113 (282)
T cd06636          53 -------------------EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNT  113 (282)
T ss_pred             -------------------hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHc
Confidence                               11224467788888888 7999999999884      346799999999999999998753


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                        ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...
T Consensus       114 ~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636         114 KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence              34888999999999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.87  E-value=2.1e-21  Score=175.80  Aligned_cols=148  Identities=25%  Similarity=0.406  Sum_probs=127.4

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.+|.|++|.||++.+. .++..+++|.+....                                           
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~-~~~~~~~ik~~~~~~-------------------------------------------   36 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDK-LTGEIVALKKIRLET-------------------------------------------   36 (283)
T ss_pred             CchheEecCCCCeEEEEEEEc-CCCCEEEEEEeeccc-------------------------------------------
Confidence            567889999999999999855 457889999875431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~  308 (362)
                                    ........+.+|+++++.++|||++++++++.+++..|++|||+ +++|.+++....  .+++..+
T Consensus        37 --------------~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~  101 (283)
T cd07835          37 --------------EDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLI  101 (283)
T ss_pred             --------------ccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc-CcCHHHHHhhCCCCCCCHHHH
Confidence                          01112244678999999999999999999999999999999999 578999887655  6899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||+++.+.
T Consensus       102 ~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835         102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            9999999999999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.87  E-value=2.8e-21  Score=175.46  Aligned_cols=146  Identities=27%  Similarity=0.475  Sum_probs=126.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.-...||+|++|.||++.... .++.+++|.+...                                           
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~iK~~~~~-------------------------------------------   55 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKS-TGRQVAVKKMDLR-------------------------------------------   55 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECC-CCCEEEEEEEecc-------------------------------------------
Confidence            34455789999999999998553 4778999976322                                           


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                      .......+.+|+.+++.++||||+++++++...+..|+++||+++++|.+++.. .+++...+.
T Consensus        56 ----------------~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~  118 (285)
T cd06648          56 ----------------KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIA  118 (285)
T ss_pred             ----------------chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHH
Confidence                            111234478899999999999999999999999999999999999999999877 678999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.||.|||++|++||||+|+||+++.++.++|+|||++...
T Consensus       119 ~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~  165 (285)
T cd06648         119 TVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV  165 (285)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence            99999999999999999999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.86  E-value=1.3e-21  Score=175.90  Aligned_cols=108  Identities=31%  Similarity=0.393  Sum_probs=97.6

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-------GNFDDATTRFYTACVVEAFDYL  322 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~ql~~al~~l  322 (362)
                      ...+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++...       ..++...+..++.|++.||.||
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  122 (269)
T cd05044          43 KKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL  122 (269)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH
Confidence            345788999999999999999999999999999999999999999998642       2377899999999999999999


Q ss_pred             HHCCcEeecCCCCcEEecCCC-----cEEEEecccceecC
Q psy14740        323 HSRNIIYRDLKPENLLLSTSG-----YVKLVDFGFAKKLI  357 (362)
Q Consensus       323 H~~~iiHrDikp~NIl~~~~~-----~~kl~DFG~a~~~~  357 (362)
                      |+.+++|+||||+||+++.++     .++|+|||+++.+.
T Consensus       123 H~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~  162 (269)
T cd05044         123 EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIY  162 (269)
T ss_pred             HhCCcccCCCChheEEEecCCCCCCcceEECCcccccccc
Confidence            999999999999999999877     89999999987653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.86  E-value=3.7e-21  Score=174.01  Aligned_cols=146  Identities=23%  Similarity=0.410  Sum_probs=121.9

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.+|+|+||.||++... .+++.+|+|.+.+...                                          
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~-~~~~~~aik~~~~~~~------------------------------------------   37 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSR-KTGKYYAIKCMKKHFK------------------------------------------   37 (282)
T ss_pred             CceEeeccccccceEEEEEEc-CCCcEEEEEEehhccC------------------------------------------
Confidence            678899999999999999855 4577899998754210                                          


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                      ........+|+.++..+ +|||++++++++.++  +.+++||||++ ++|.+.+... ..+++.
T Consensus        38 ----------------~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~  100 (282)
T cd07831          38 ----------------SLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEK  100 (282)
T ss_pred             ----------------CchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHH
Confidence                            00112235688888888 599999999999887  88999999995 5788777653 468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||+.|++|+||||+||+++. +.++|+|||+++.+.
T Consensus       101 ~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~  150 (282)
T cd07831         101 RVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIY  150 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence            99999999999999999999999999999999999 999999999998653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0587|consensus

Probab=99.86  E-value=3.8e-21  Score=186.52  Aligned_cols=152  Identities=23%  Similarity=0.426  Sum_probs=132.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-+-|.++..+|.|.||.||++... .+++..|+|+....                                        
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~-~~~~~aa~kI~~~~----------------------------------------   55 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHV-KTGQLAAIKIMDPT----------------------------------------   55 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeee-ecCceeeeEeecCC----------------------------------------
Confidence            5677999999999999999999855 45778899986432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                          ......+..|.++++.. +|||++.+|++|.     .++.+|||||||.|||..++++.-
T Consensus        56 --------------------~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~  115 (953)
T KOG0587|consen   56 --------------------EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT  115 (953)
T ss_pred             --------------------ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh
Confidence                                22335577788888886 7999999999985     357899999999999999999853


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                        ..+.++.+.+|++.++.|+.+||.+.++|||||-.|||++.++.|||+|||++.+++..
T Consensus       116 ~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen  116 KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST  176 (953)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence              46999999999999999999999999999999999999999999999999999988654

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.86  E-value=2.9e-21  Score=172.20  Aligned_cols=150  Identities=25%  Similarity=0.499  Sum_probs=128.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|++.+.+|.|+||.||++.... ++..+++|.+.....                                         
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~-----------------------------------------   38 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS-DSEHCVIKEIDLTKM-----------------------------------------   38 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC-CCceEEEEEeeHhhc-----------------------------------------
Confidence            47889999999999999998654 467799998754310                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~  307 (362)
                                      .......+.+|+.+++.++||||+++++.+...+..|+++||+++++|.+++....  .+++..
T Consensus        39 ----------------~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (257)
T cd08225          39 ----------------PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ  102 (257)
T ss_pred             ----------------cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence                            11123456789999999999999999999999999999999999999999987643  478999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||.+..+.
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (257)
T cd08225         103 ILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN  153 (257)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence            999999999999999999999999999999998875 46999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.86  E-value=2.2e-21  Score=171.40  Aligned_cols=102  Identities=25%  Similarity=0.415  Sum_probs=92.4

Q ss_pred             HHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCC
Q psy14740        256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE  335 (362)
Q Consensus       256 E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~  335 (362)
                      |...+....||||+++++++...+.+|++|||+++++|.+++.+...+++..+..++.|++.||.|||++|++||||||+
T Consensus        35 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~  114 (237)
T cd05576          35 ERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPN  114 (237)
T ss_pred             HHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHH
Confidence            33444455799999999999999999999999999999999987777999999999999999999999999999999999


Q ss_pred             cEEecCCCcEEEEecccceecC
Q psy14740        336 NLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       336 NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ||+++.++.++++|||.+..+.
T Consensus       115 Nil~~~~~~~~l~df~~~~~~~  136 (237)
T cd05576         115 NILLDDRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             HEEEcCCCCEEEecccchhccc
Confidence            9999999999999999876543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.86  E-value=1.7e-21  Score=181.18  Aligned_cols=151  Identities=30%  Similarity=0.474  Sum_probs=126.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.+|+|+||.||++.+. .+++.+++|.+.+..                                       
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~vK~~~~~~---------------------------------------   44 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDR-RTKEVVALKKIFDAF---------------------------------------   44 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEc-CCCeEEEEEeecccc---------------------------------------
Confidence            3567888999999999999999854 457789999874320                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                        ........+.+|+.+++.+ +||||+++++++...  ..+|+||||++ ++|..++... .+
T Consensus        45 ------------------~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~  104 (337)
T cd07852          45 ------------------RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN-IL  104 (337)
T ss_pred             ------------------CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC-CC
Confidence                              0011223466799999999 999999999987643  46899999995 6999888764 78


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.....++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.+.
T Consensus       105 ~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852         105 EDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            899999999999999999999999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.86  E-value=4e-21  Score=173.92  Aligned_cols=148  Identities=31%  Similarity=0.522  Sum_probs=126.6

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.||.|+||.||.+... ++++.+++|.+.+...                                          
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~-~~~~~~~ik~~~~~~~------------------------------------------   37 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNK-ETGELVAIKKMKKKFY------------------------------------------   37 (283)
T ss_pred             CeeheeeccCCceEEEEEEEC-CCCcEEEEEEehhhcc------------------------------------------
Confidence            578889999999999999854 4577899998754310                                          


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDAT  307 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~  307 (362)
                                      ........+|+..++.++ ||||+++++++..++..|+||||+ +++|.+.+....  .+++..
T Consensus        38 ----------------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~  100 (283)
T cd07830          38 ----------------SWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESV  100 (283)
T ss_pred             ----------------chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHH
Confidence                            011123456888899998 999999999999999999999999 889999887654  689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||+++....
T Consensus       101 ~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830         101 IRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence            999999999999999999999999999999999999999999999986643

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.86  E-value=3e-21  Score=174.48  Aligned_cols=149  Identities=27%  Similarity=0.429  Sum_probs=129.0

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |+..+.+|+|.||.||.+... .+++.+++|.+....                                           
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~-~~~~~~~iK~~~~~~-------------------------------------------   36 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDK-KTGEIVALKKIRLDN-------------------------------------------   36 (282)
T ss_pred             CeeehcccccCcceEEEeeec-CCCcEEEEEEecccc-------------------------------------------
Confidence            567788999999999999855 457889999886531                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~  309 (362)
                                    ........+..|+.+++.++|||++++++++...+.++++||+++ ++|.+++.+. ..+++..+.
T Consensus        37 --------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~  101 (282)
T cd07829          37 --------------EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIK  101 (282)
T ss_pred             --------------ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHH
Confidence                          112223456789999999999999999999999999999999996 6999999875 579999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.|++.||.|||++||+|+||+|+||+++.++.++|+|||+++....
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829         102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            9999999999999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG2052|consensus

Probab=99.86  E-value=2.7e-21  Score=174.98  Aligned_cols=144  Identities=19%  Similarity=0.288  Sum_probs=125.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+..+++.+|+|.||+|+++.+.   |+.||+|++.-.                                          
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wr---Ge~VAVKiF~sr------------------------------------------  245 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWR---GEDVAVKIFSSR------------------------------------------  245 (513)
T ss_pred             heeEEEEEecCccccceeecccc---CCceEEEEeccc------------------------------------------
Confidence            45689999999999999999988   457999998532                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhh--cCCcceeeeeeeeecc----ceEEEEEeccCCcchHHHHHhcCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE--ANCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                          ..+.+.+|.+|.+.  ++|+||+.+++.-...    ..+|||++|.+.|||++++.+ ..
T Consensus       246 --------------------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~t  304 (513)
T KOG2052|consen  246 --------------------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NT  304 (513)
T ss_pred             --------------------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-cc
Confidence                                34668889999887  5999999999875433    359999999999999999988 57


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHC--------CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSR--------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~--------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.+.+..++..++.||+|||..        .|.|||||..|||+.++|.+.|+|+|+|-....
T Consensus       305 v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~  368 (513)
T KOG2052|consen  305 VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  368 (513)
T ss_pred             CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence            99999999999999999999953        599999999999999999999999999976543

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.86  E-value=8.5e-21  Score=174.71  Aligned_cols=148  Identities=28%  Similarity=0.430  Sum_probs=125.2

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.....+|+|+||.||++... .+++.+++|.+....                                           
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~-~~~~~v~ik~~~~~~-------------------------------------------   58 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNS-HTNEVVAVKKMSYSG-------------------------------------------   58 (313)
T ss_pred             hhcceeeccCCCeEEEEEEEC-CCCcEEEEEEEeccc-------------------------------------------
Confidence            566778999999999999854 457889999875431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~  309 (362)
                                   .........+..|+.+++.++|||++++++++.+....|++|||+. +++.+++.. ..++++..+.
T Consensus        59 -------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~  124 (313)
T cd06633          59 -------------KQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA  124 (313)
T ss_pred             -------------cCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHH
Confidence                         1112233557889999999999999999999999999999999994 677777754 4568999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus       125 ~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         125 AITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            99999999999999999999999999999999999999999988643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1151|consensus

Probab=99.86  E-value=2.5e-22  Score=181.47  Aligned_cols=160  Identities=29%  Similarity=0.404  Sum_probs=133.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+...||.|+|++||++-+. ...+.+|+|+-.-.                                          
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl-~EqRYvAvKIHqlN------------------------------------------  499 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDL-TEQRYVAVKIHQLN------------------------------------------  499 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhccc-chhheeeEeeehhc------------------------------------------
Confidence            46778888999999999999855 45788999974321                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee-ccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK-DKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                +.|.........+...+|..|.+.++||.||++|++|. +.+.+|-|+|||+|.+|.-+++.++.+++..
T Consensus       500 ----------K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKE  569 (775)
T KOG1151|consen  500 ----------KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE  569 (775)
T ss_pred             ----------cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHH
Confidence                      00112222345567889999999999999999999986 5677999999999999999999988999999


Q ss_pred             HHHHHHHHHHHHHHHHHC--CcEeecCCCCcEEecC---CCcEEEEecccceecCCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSR--NIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~--~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~~~~  361 (362)
                      ++.|+.||+.||.||...  .|||-||||.|||+-.   .|.+||+|||+++.+.+..|
T Consensus       570 ARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy  628 (775)
T KOG1151|consen  570 ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSY  628 (775)
T ss_pred             HHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCcc
Confidence            999999999999999976  5999999999999954   47899999999999987765

>KOG0668|consensus

Probab=99.86  E-value=1.5e-22  Score=168.56  Aligned_cols=149  Identities=23%  Similarity=0.353  Sum_probs=127.3

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .+...++|+++..+|.|.|++|+.+... .+++.++||++++-                                     
T Consensus        33 ~wg~~ddYeivrk~GRGKYSEVFeg~~~-~~~eK~ViKiLKPV-------------------------------------   74 (338)
T KOG0668|consen   33 DWGNQDDYEIVRKVGRGKYSEVFEGINI-TNNEKCVIKILKPV-------------------------------------   74 (338)
T ss_pred             eccccchHHHHHHHcCccHhhHhccccc-CCCceEEEeeechH-------------------------------------
Confidence            4456789999999999999999999865 45678999998653                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                               ....+.+|+.||..+. ||||++++++..++  ...-+++|++.+.+...+..  
T Consensus        75 -------------------------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~--  127 (338)
T KOG0668|consen   75 -------------------------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP--  127 (338)
T ss_pred             -------------------------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh--
Confidence                                     2355889999999995 99999999998765  45889999998888777653  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~  358 (362)
                       .++...++.++.+++.||.|||+.||.|||+||.|++|+.. -.++|+|+|+|..+-+
T Consensus       128 -tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  128 -TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             -hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence             48889999999999999999999999999999999999964 5699999999977643

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.86  E-value=6e-21  Score=174.13  Aligned_cols=161  Identities=20%  Similarity=0.258  Sum_probs=115.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -.+|++.+.||+|+||.||++....+.  +..+++|......-    ..                  ..+.         
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~----~~------------------~~e~---------   59 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE----TI------------------VMET---------   59 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC----ch------------------hhHH---------
Confidence            368999999999999999999865431  34556664321100    00                  0000         


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       .............+...+..++|+|++++++.+....    +.+++++++ ..++.+++....
T Consensus        60 -----------------~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  121 (294)
T PHA02882         60 -----------------LVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIK  121 (294)
T ss_pred             -----------------HHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhhc
Confidence                             0000001112234445566789999999998765433    457888887 557777776655


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||+|+.+.
T Consensus       122 ~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        122 CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeec
Confidence            57889999999999999999999999999999999999999999999999998763

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.86  E-value=3.8e-21  Score=178.17  Aligned_cols=140  Identities=16%  Similarity=0.248  Sum_probs=119.8

Q ss_pred             Eeccc--ceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        156 TLGVG--GFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       156 ~lg~G--~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      .||.|  +||.||++.+. .+++.+|+|.+....                                              
T Consensus         5 ~ig~g~~~~~~v~~a~~~-~~~~~vaiK~~~~~~----------------------------------------------   37 (328)
T cd08226           5 EIGRGFCNLTSVYLARHT-PTGTLVTVRITDLEN----------------------------------------------   37 (328)
T ss_pred             HhCCcccCceeEEEEEEc-CCCcEEEEEEecccc----------------------------------------------
Confidence            35555  99999999854 458899999875421                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATTRFY  311 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~  311 (362)
                                 ........+.+|+.+++.++||||+++++++..++..|++|||+.+++|.+++...  ..+++..+..+
T Consensus        38 -----------~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~  106 (328)
T cd08226          38 -----------CTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNI  106 (328)
T ss_pred             -----------CCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHH
Confidence                       01123356788999999999999999999999999999999999999999998764  34899999999


Q ss_pred             HHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      +.|++.||.|||++|++||||||+||+++.++.++++||+.+
T Consensus       107 ~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~  148 (328)
T cd08226         107 LFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHL  148 (328)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHH
Confidence            999999999999999999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.86  E-value=4.9e-21  Score=173.85  Aligned_cols=150  Identities=30%  Similarity=0.489  Sum_probs=132.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ....|.....+|+|+||.||.+.+.. .+..+++|.+....                                       
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~---------------------------------------   56 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRA-TGKEVAIKKMRLRK---------------------------------------   56 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEcc-CCcEEEEEEEecCc---------------------------------------
Confidence            34567888899999999999998654 46789999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                          . ....+..|+++++.++|||++++++.+...+..|+++||+++++|.+++.... .++.
T Consensus        57 --------------------~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~  115 (286)
T cd06614          57 --------------------Q-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNE  115 (286)
T ss_pred             --------------------h-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCH
Confidence                                0 33557889999999999999999999999999999999999999999998866 7999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus       116 ~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614         116 PQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            9999999999999999999999999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG3653|consensus

Probab=99.86  E-value=9.1e-22  Score=179.20  Aligned_cols=146  Identities=24%  Similarity=0.323  Sum_probs=127.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+....+.+.+|+|.||.||+++..   ++.||||++...                                        
T Consensus       208 ~l~pl~l~eli~~Grfg~V~KaqL~---~~~VAVKifp~~----------------------------------------  244 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQLD---NRLVAVKIFPEQ----------------------------------------  244 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhhcc---CceeEEEecCHH----------------------------------------
Confidence            3556778889999999999999855   578999998543                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhh--cCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                            ..+.+..|.+|.+.  ++|+||+++++.-....    .++||++|.+.|+|.++++.+
T Consensus       245 ----------------------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n  302 (534)
T KOG3653|consen  245 ----------------------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN  302 (534)
T ss_pred             ----------------------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc
Confidence                                  34668889999887  48999999999876555    799999999999999999874


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHC---------CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSR---------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~---------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                       ..+......++..++.||+|||+-         .|+|||||..|||+..++++.|+|||+|.++..
T Consensus       303 -tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p  368 (534)
T KOG3653|consen  303 -TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP  368 (534)
T ss_pred             -cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence             589999999999999999999953         599999999999999999999999999998864

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.86  E-value=4.8e-21  Score=174.64  Aligned_cols=142  Identities=26%  Similarity=0.479  Sum_probs=123.5

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      ..||+|+||.||++... .+++.+++|.+...                                                
T Consensus        26 ~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~------------------------------------------------   56 (292)
T cd06657          26 IKIGEGSTGIVCIATVK-SSGKLVAVKKMDLR------------------------------------------------   56 (292)
T ss_pred             HHcCCCCCeEEEEEEEc-CCCeEEEEEEeccc------------------------------------------------
Confidence            56899999999999854 45788999976321                                                


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC  314 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~q  314 (362)
                                 .......+.+|+.+++.++||||+++++.+...+..|++|||+++++|.+++.. ..+++..+..++.|
T Consensus        57 -----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~q  124 (292)
T cd06657          57 -----------KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLA  124 (292)
T ss_pred             -----------chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHH
Confidence                       112334578899999999999999999999999999999999999999998754 56899999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus       125 l~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~  167 (292)
T cd06657         125 VLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS  167 (292)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecc
Confidence            9999999999999999999999999999999999999887553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0669|consensus

Probab=99.86  E-value=3.2e-23  Score=174.81  Aligned_cols=151  Identities=22%  Similarity=0.426  Sum_probs=123.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|.-...+|+|+||+||+++ .+..++.||+|...-..                                        
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr-~~n~~kkvalkkvlmen----------------------------------------   54 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKAR-SKNTGKKVALKKVLMEN----------------------------------------   54 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHh-hcCccchhHHHHHHHhc----------------------------------------
Confidence            3455666789999999999998 44567778887643210                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--------cceEEEEEeccCCcchHHHHHh
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--------KKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                       ..........+|+.+|..++|+|++.+...+..        ...+|+||++| ..+|.-++..
T Consensus        55 -----------------eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~c-ehDLaGlLsn  116 (376)
T KOG0669|consen   55 -----------------EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFC-EHDLAGLLSN  116 (376)
T ss_pred             -----------------cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHh-hhhHHHHhcC
Confidence                             011223446789999999999999999887643        24599999999 6789998876


Q ss_pred             c-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 K-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      . .+++...+..++.+++.||.|+|+..|+|||+||.|+||+.+|.+||+|||+++.+.
T Consensus       117 ~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen  117 RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence            5 469999999999999999999999999999999999999999999999999997664

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.86  E-value=3.5e-21  Score=179.59  Aligned_cols=150  Identities=21%  Similarity=0.420  Sum_probs=128.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+...||+|+||.||++... .+++.+++|.+....                                        
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~~----------------------------------------   52 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDT-KTGRKVAIKKLSRPF----------------------------------------   52 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEEC-CCCcEEEEEeccccc----------------------------------------
Confidence            567999999999999999999865 457789999875320                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccce------EEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY------LYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ........+.+|+.+++.++||||+++++++...+.      .|+|+||+ +++|.+++.. .
T Consensus        53 -----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~  113 (343)
T cd07851          53 -----------------QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-Q  113 (343)
T ss_pred             -----------------chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-C
Confidence                             111223456789999999999999999998766554      89999998 7899998875 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus       114 ~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851         114 KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence            69999999999999999999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.85  E-value=5.9e-21  Score=172.69  Aligned_cols=150  Identities=28%  Similarity=0.481  Sum_probs=128.3

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+.+.||.|++|.||++... .+++.+++|.+....                                           
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~-------------------------------------------   36 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDK-LTGEIVAIKKIKLRF-------------------------------------------   36 (283)
T ss_pred             CccceeeecCCCceEEEEEcC-CCCcEEEEEEecccc-------------------------------------------
Confidence            567788999999999999854 457889999875431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~  309 (362)
                                    ........+.+|+.+++.++||||+++++++..++.++++|||++ ++|.+++.. ...+++..+.
T Consensus        37 --------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~l~~~~~~~~~~~~~  101 (283)
T cd05118          37 --------------ESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQRGLPESLIK  101 (283)
T ss_pred             --------------ccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CCHHHHHHhhcccCCHHHHH
Confidence                          111234567789999999999999999999999999999999995 588887766 3578999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+..+..+
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118         102 SYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            99999999999999999999999999999999999999999999776543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.85  E-value=5.6e-21  Score=178.14  Aligned_cols=147  Identities=27%  Similarity=0.449  Sum_probs=123.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -.+|.+.+.||.|+||.||++... .+++.+++|.+....                                        
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~-~~~~~v~iK~i~~~~----------------------------------------   42 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDS-DCDKRVAVKKIVLTD----------------------------------------   42 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEEC-CCCcEEEEEEEecCC----------------------------------------
Confidence            368999999999999999999854 567889999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--------------ceEEEEEeccCCcch
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--------------KYLYMLMESCLGGEL  293 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------------~~~~lv~e~~~~~~L  293 (362)
                                         ......+.+|+++++.++||||+++++++...              ...|++|||++ ++|
T Consensus        43 -------------------~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L  102 (342)
T cd07854          43 -------------------PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDL  102 (342)
T ss_pred             -------------------CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccH
Confidence                               12235577899999999999999999876543              35899999995 689


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceec
Q psy14740        294 WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL  356 (362)
Q Consensus       294 ~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~  356 (362)
                      .+++.. ..+++..++.++.|++.||.|||++|++||||||+||+++. ++.++|+|||+++.+
T Consensus       103 ~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~  165 (342)
T cd07854         103 ANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIV  165 (342)
T ss_pred             HHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceec
Confidence            888764 46899999999999999999999999999999999999985 567899999999765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4278|consensus

Probab=99.85  E-value=9.8e-22  Score=184.02  Aligned_cols=153  Identities=25%  Similarity=0.409  Sum_probs=135.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+.....+||-|.||+||...+.+- .-.+|+|.++..                                          
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKky-slTvAVKtLKED------------------------------------------  303 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED------------------------------------------  303 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeecc-ceeeehhhhhhc------------------------------------------
Confidence            3445667899999999999998754 557899987543                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~  306 (362)
                                        ......|+.|+.+|+.++|||+|++.+++..+..+|||+||+..|+|.+++.+..  .++..
T Consensus       304 ------------------tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~av  365 (1157)
T KOG4278|consen  304 ------------------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAV  365 (1157)
T ss_pred             ------------------chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchh
Confidence                              2345679999999999999999999999999999999999999999999998654  37788


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS  362 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~~  362 (362)
                      .+.+++.||.+|++||..+++|||||-..|.|+..+..+|++|||+++.+.++.|+
T Consensus       366 vLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  366 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence            88899999999999999999999999999999999999999999999999988774

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.85  E-value=9.9e-21  Score=174.17  Aligned_cols=109  Identities=22%  Similarity=0.319  Sum_probs=100.6

Q ss_pred             hhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy14740        249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDDATTRFYTACVVEAFDYLHSRN  326 (362)
Q Consensus       249 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~al~~lH~~~  326 (362)
                      ....+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++...  ..+++..+..++.|++.||.|||+++
T Consensus        42 ~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  121 (314)
T cd08216          42 DLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG  121 (314)
T ss_pred             HHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456889999999999999999999999999999999999999999998763  35899999999999999999999999


Q ss_pred             cEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       327 iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |+||||||+||+++.++.++|+|||.+..+.
T Consensus       122 ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~  152 (314)
T cd08216         122 FIHRSVKASHILLSGDGKVVLSGLRYSVSMI  152 (314)
T ss_pred             eecCCCCcceEEEecCCceEEecCccceeec
Confidence            9999999999999999999999999887654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PRK10345 hypothetical protein; Provisional

Probab=99.85  E-value=5.6e-21  Score=164.10  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=83.3

Q ss_pred             hhhHHHHHHHhhc-----CCcceeeeeeeeeccc---eEE-EEEec--cCCcchHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy14740        251 QHIMSEKEIMGEA-----NCDFIVKLYKTFKDKK---YLY-MLMES--CLGGELWTILRDKGNFDDATTRFYTACVVEAF  319 (362)
Q Consensus       251 ~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~---~~~-lv~e~--~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al  319 (362)
                      ..+.+|+.+++.+     +||||+++|++++++.   .++ +||||  +++++|.+++++ +.+++.  ..++.|++.++
T Consensus        41 ~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l  117 (210)
T PRK10345         41 KEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKL  117 (210)
T ss_pred             HHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHH
Confidence            4578999999999     6799999999998873   434 78999  557999999976 346665  35678888888


Q ss_pred             -HHHHHCCcEeecCCCCcEEecCC----CcEEEEecccceec
Q psy14740        320 -DYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKL  356 (362)
Q Consensus       320 -~~lH~~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~~~  356 (362)
                       +|||+++|+||||||+|||++..    +.++|+||+-++.+
T Consensus       118 ~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345        118 KRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             HHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence             99999999999999999999743    37999995444433

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.85  E-value=2e-20  Score=169.61  Aligned_cols=148  Identities=26%  Similarity=0.398  Sum_probs=122.6

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++.+.+|.|+||.||++.+. .+++.+|+|.+....                                           
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~-~~~~~~aiK~~~~~~-------------------------------------------   36 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDL-NTGRFVALKKVRVPL-------------------------------------------   36 (287)
T ss_pred             CeEEEEecccCceEEEEEEEC-CCCCEEEEEEecccc-------------------------------------------
Confidence            678899999999999999965 357889999886431                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeeeccce-----EEEEEeccCCcchHHHHHhcC-
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFKDKKY-----LYMLMESCLGGELWTILRDKG-  301 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~-  301 (362)
                                    ........+.+|+.+++.+   +|||++++++++...+.     ++++||+++ ++|.+++.... 
T Consensus        37 --------------~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~  101 (287)
T cd07838          37 --------------SEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK  101 (287)
T ss_pred             --------------ccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccC
Confidence                          0111123345677766655   69999999999987776     999999995 58988887643 


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 -NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 -~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++..+.
T Consensus       102 ~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838         102 PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence             48999999999999999999999999999999999999999999999999997763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0983|consensus

Probab=99.85  E-value=8.3e-22  Score=168.11  Aligned_cols=153  Identities=27%  Similarity=0.512  Sum_probs=127.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++.+.+.-+|+|+.|.|+..... .++...|+|.+.+.+                                       
T Consensus        90 dindl~~l~dlGsGtcG~V~k~~~r-s~~~iiAVK~M~rt~---------------------------------------  129 (391)
T KOG0983|consen   90 DINDLENLGDLGSGTCGQVWKMRFR-STGHIIAVKQMRRTG---------------------------------------  129 (391)
T ss_pred             ChHHhhhHHhhcCCCccceEEEEEc-ccceEEEEEeecccC---------------------------------------
Confidence            4566777888999999999999855 467889999987642                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                         .....++++..+.++... ++|+||+.+++|..+..+++.||.+ ...+..++++ .++++
T Consensus       130 -------------------Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~C~ekLlkrik~piP  189 (391)
T KOG0983|consen  130 -------------------NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-STCAEKLLKRIKGPIP  189 (391)
T ss_pred             -------------------CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HHHHHHHHHHhcCCch
Confidence                               122335566677776665 5999999999999999999999998 6667777665 45799


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLH-SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH-~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      |..+-++...++.||.||. .+||+|||+||+|||+|..|++||||||++.++.++
T Consensus       190 E~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  190 ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence            9999999999999999997 568999999999999999999999999999887654

>KOG1006|consensus

Probab=99.85  E-value=2.4e-22  Score=170.71  Aligned_cols=150  Identities=29%  Similarity=0.490  Sum_probs=124.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++.+-...||.|.||.|++-.+. .+++..|+|.++-.                                          
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk-~sg~~mAVKrIr~~------------------------------------------  100 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHK-PSGKLMAVKRIRSN------------------------------------------  100 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcC-ccCcEEEEEEeeec------------------------------------------
Confidence            33444567999999999998854 67899999988532                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-----cCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~  302 (362)
                                      .....+.+++.|.+...+ -++||||++|+..-.++..|+.||++ ..||..+.+.     +..
T Consensus       101 ----------------n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~  163 (361)
T KOG1006|consen  101 ----------------NIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSR  163 (361)
T ss_pred             ----------------cchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhcc
Confidence                            234566778888887655 48999999999988888899999999 7788776542     346


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..|....+.||.||.. ..|||||+||+|||++..|.+||||||+|.++.+
T Consensus       164 ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  164 IPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             CcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence            9999999999999999999974 5899999999999999999999999999977643

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.85  E-value=4.6e-21  Score=174.11  Aligned_cols=149  Identities=26%  Similarity=0.487  Sum_probs=122.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.....||+|+||.||.+.+. .+++.+|+|.+.+..                                         
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~~~aiK~~~~~~-----------------------------------------   41 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHK-PSGTIMAVKRIRSTV-----------------------------------------   41 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEEC-CCCCEEEEEEehhcc-----------------------------------------
Confidence            45566678999999999999865 457889999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHH-----hcCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-----DKGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~~  302 (362)
                                       .......+..|+.++.++. ||||+++++++..++..+++||++ ++++.++..     ....
T Consensus        42 -----------------~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~-~~~l~~l~~~~~~~~~~~  103 (288)
T cd06616          42 -----------------DEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM-DISLDKFYKYVYEVLKSV  103 (288)
T ss_pred             -----------------ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc-cCCHHHHHHHHHHhhcCC
Confidence                             0123355788999999985 999999999999889999999998 455554332     2356


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||+++.+.
T Consensus       104 l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         104 IPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            9999999999999999999997 499999999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.85  E-value=7.1e-21  Score=174.82  Aligned_cols=151  Identities=28%  Similarity=0.407  Sum_probs=126.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|.....+|.|+||.||++... .+++.+++|.+....                                         
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~~ik~~~~~~-----------------------------------------   52 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSG-----------------------------------------   52 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEc-CCCcEEEEEEEeccc-----------------------------------------
Confidence            34666788999999999999865 457789999875321                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                     ........++.+|+++++.++|||++++++++......|+||||+. +++.+++.. ..++++..
T Consensus        53 ---------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~  116 (308)
T cd06634          53 ---------------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE  116 (308)
T ss_pred             ---------------ccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHH
Confidence                           1112233557789999999999999999999999999999999995 677776654 44689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++..+.
T Consensus       117 ~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634         117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            99999999999999999999999999999999999999999999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.85  E-value=1.1e-20  Score=172.44  Aligned_cols=152  Identities=30%  Similarity=0.541  Sum_probs=125.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.+|+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~avK~~~~~~~-------------------------------------   53 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFK-KTGHVMAVKQMRRTGN-------------------------------------   53 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEEC-CCCeEEEEEEEeccCC-------------------------------------
Confidence            46788999999999999999999865 4578899998864310                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l  303 (362)
                                           ......+..|..++... +||||+++++++......|++|||+ ++++.+++.. ...+
T Consensus        54 ---------------------~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~l~~~~~~~l  111 (296)
T cd06618          54 ---------------------KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM-STCLDKLLKRIQGPI  111 (296)
T ss_pred             ---------------------hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc-CcCHHHHHHHhcCCC
Confidence                                 11123455666666665 5999999999999999999999998 5577777655 3568


Q ss_pred             CHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.|+.|||+ +||+||||+|+||+++.++.++|+|||++..+.
T Consensus       112 ~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618         112 PEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            999999999999999999997 699999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.85  E-value=8.5e-21  Score=169.71  Aligned_cols=152  Identities=24%  Similarity=0.399  Sum_probs=123.6

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+.+.||+|+||.||++.... .+..+++|++.....                                         
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~-~~~~~~~~~~~~~~~-----------------------------------------   38 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKK-AVAEERLKVLKEIPV-----------------------------------------   38 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecC-CCCcceEEEeccccc-----------------------------------------
Confidence            57889999999999999998553 345566666543211                                         


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cCCCCH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFDD  305 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~  305 (362)
                                   .........++..|+.+++.++||||+++++++.+....+++|||+++++|.+++..    ...+++
T Consensus        39 -------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  105 (260)
T cd08222          39 -------------GELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSE  105 (260)
T ss_pred             -------------cccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCH
Confidence                         000111223456788999999999999999999999999999999999999988764    345899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||+++.+.
T Consensus       106 ~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222         106 NQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecC
Confidence            999999999999999999999999999999999975 679999999987664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0596|consensus

Probab=99.85  E-value=3.3e-21  Score=178.46  Aligned_cols=151  Identities=29%  Similarity=0.441  Sum_probs=126.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-..|++++.||.|+-+.||++... + .+.+|+|.+.-                                         
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s-~-~~iyalkkv~~-----------------------------------------  395 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNS-D-KQIYALKKVVL-----------------------------------------  395 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecC-C-CcchhhhHHHH-----------------------------------------
Confidence            4467889999999999999999843 3 44566665422                                         


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC-CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~  304 (362)
                                      ...+......+..|+.+|.++ .|.+|+++|++-..++++|+|||+= ..+|.+++++... .+
T Consensus       396 ----------------~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~  458 (677)
T KOG0596|consen  396 ----------------LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDP  458 (677)
T ss_pred             ----------------hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCc
Confidence                            223445567789999999999 6999999999999999999999974 7899999987654 44


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ...++++..||+.|+.++|.+||||.||||.|+|+ -.|.+||+|||+|..+..
T Consensus       459 ~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  459 DWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQP  511 (677)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCc
Confidence            47899999999999999999999999999999999 578999999999987644

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.85  E-value=1.5e-20  Score=175.28  Aligned_cols=148  Identities=20%  Similarity=0.372  Sum_probs=123.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+...||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   52 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDK-RTGEKVAIKKLSRPF----------------------------------------   52 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeC-CCCcEEEEEEecCcc----------------------------------------
Confidence            468999999999999999999854 457889999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ........+.+|+.+++.++||||+++++++...      ..+|++|||+ ..+|..+..  .
T Consensus        53 -----------------~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~--~  112 (342)
T cd07879          53 -----------------QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYM-QTDLQKIMG--H  112 (342)
T ss_pred             -----------------ccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccc-ccCHHHHHc--C
Confidence                             1112234577899999999999999999988654      3469999998 457776653  3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++..
T Consensus       113 ~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879         113 PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            6899999999999999999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0664|consensus

Probab=99.84  E-value=1.7e-22  Score=172.29  Aligned_cols=149  Identities=25%  Similarity=0.439  Sum_probs=125.2

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +.+.-+.||.|.||.||.+.+. .+++.+++|.+..-                                           
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDP-RdgrrvalkK~pnv-------------------------------------------   89 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDP-RSGKRVALKKMPNV-------------------------------------------   89 (449)
T ss_pred             cCCCCCcccccceeEEEeccCC-CCccchhHhhcchH-------------------------------------------
Confidence            3445577999999999999855 45888999876431                                           


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                    ......-+++.+|..+|.-.+|.|+....+..+-.     ..+|+++|++ ..+|.+++-+..+++
T Consensus        90 --------------fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELm-QSDLHKIIVSPQ~Ls  154 (449)
T KOG0664|consen   90 --------------FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELM-QSDLHKIIVSPQALT  154 (449)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHH-HhhhhheeccCCCCC
Confidence                          11222345688999999999999999998887543     2478899998 789999998888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+.++.+..||+.||.|||+.+|+||||||.|+|++++..+||||||+|+...
T Consensus       155 ~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee  207 (449)
T KOG0664|consen  155 PDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWD  207 (449)
T ss_pred             cchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccc
Confidence            99999999999999999999999999999999999999999999999998654

>KOG0576|consensus

Probab=99.84  E-value=3.1e-22  Score=188.72  Aligned_cols=151  Identities=26%  Similarity=0.429  Sum_probs=134.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      --++|.++.++|+|+||+||++++. .+++..|+|+++-.                                        
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~-~s~elaavkvVkLe----------------------------------------   51 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDK-RSGELAAVKVVKLE----------------------------------------   51 (829)
T ss_pred             CccchhheeeecCCcccchhhhccc-ccCchhhheeeecc----------------------------------------
Confidence            4578999999999999999999854 56889999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                         .....+-+++|+-+++.++||||+.+++.|...+.+|+.||||.||+|.++..-.+++++.
T Consensus        52 -------------------p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgplsel  112 (829)
T KOG0576|consen   52 -------------------PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSEL  112 (829)
T ss_pred             -------------------CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhH
Confidence                               1122344677888999999999999999999999999999999999999988777889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.+..+..+.|+.|||+.|-+|||||-.||+++..|.+|++|||.+.+++
T Consensus       113 qiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen  113 QIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             HHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh
Confidence            999999999999999999999999999999999999999999999987654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.83  E-value=5.1e-20  Score=158.82  Aligned_cols=148  Identities=15%  Similarity=0.174  Sum_probs=113.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -.+|++++.+|.|+||.||++..   .+..+++|.+.+...-.                        +.|          
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~---~~~~~iiKvf~~~~~~~------------------------~~~----------   72 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT---DYGKYILKVFAPKVKRT------------------------ERF----------   72 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec---CCCcEEEEEechhcCch------------------------HHH----------
Confidence            47899999999999999999764   25579999986541100                        000          


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--------ceEEEEEeccCCcchHHHHHh
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--------KYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                      ......-..+.+|+..+.++.||+|+.+.+++...        ...+++|||++|.+|.++.. 
T Consensus        73 ----------------~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-  135 (232)
T PRK10359         73 ----------------LKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-  135 (232)
T ss_pred             ----------------HHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-
Confidence                            00001122367899999999999999999886543        35899999999999988632 


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                         +++.    ...+++.++..+|+.|++|||+||+||+++.+| ++|+|||..+...
T Consensus       136 ---~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~  185 (232)
T PRK10359        136 ---ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA  185 (232)
T ss_pred             ---ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence               3332    456899999999999999999999999999888 9999999887653

>KOG1345|consensus

Probab=99.82  E-value=1e-20  Score=161.30  Aligned_cols=147  Identities=26%  Similarity=0.393  Sum_probs=123.3

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+.+.+|+|-||.+.++.+. .++..+++|.+.+..                                         
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr-~s~t~ivlKavp~p~-----------------------------------------   61 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHR-QSKTRIVLKAVPRPQ-----------------------------------------   61 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeecc-CCceEEEeeccCcch-----------------------------------------
Confidence            56888899999999999999966 457789999886642                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeee-eeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                         ..+..|.+|..---.+ .|.||+.-|++ |+..+++.+++||++.|+|.+-+.. ..+-+.
T Consensus        62 -------------------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~-~GigE~  121 (378)
T KOG1345|consen   62 -------------------TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA-AGIGEA  121 (378)
T ss_pred             -------------------hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc-ccccHH
Confidence                               2345677777664445 58999998885 7888999999999999999987765 348888


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~~~kl~DFG~a~~~~  357 (362)
                      ..+.++.|+++|+.|+|+++++|||||.+||||-.  .-++||||||..+..+
T Consensus       122 ~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  122 NTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             HHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            99999999999999999999999999999999953  4579999999987654

>smart00090 RIO RIO-like kinase

Probab=99.82  E-value=6.6e-20  Score=161.14  Aligned_cols=171  Identities=13%  Similarity=0.008  Sum_probs=116.1

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      -|.+.+.||+|+||.||.+.+...+++++|+|.+.....-..+...    ...+.          ..|.           
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~----~~~~~----------~~~~-----------   83 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR----YVDGD----------FRFK-----------   83 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh----hcccc----------hhhc-----------
Confidence            4678889999999999999733346889999998754210000000    00000          0000           


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                .............+..|+.++..+.+.  .+++++..   . ..++||||++|.+|.........+....
T Consensus        84 ----------~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~  149 (237)
T smart00090       84 ----------YRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEE  149 (237)
T ss_pred             ----------cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHH
Confidence                      000000001123467899999999653  34444432   2 3589999998888877654445567777


Q ss_pred             HHHHHHHHHHHHHHHHHCC-cEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~-iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      +..++.|++.++.+||++| ++||||||+||+++ ++.++|+|||.|.....+.
T Consensus       150 ~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      150 EFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcc
Confidence            8899999999999999999 99999999999999 8899999999998776553

>KOG1165|consensus

Probab=99.82  E-value=8e-20  Score=160.03  Aligned_cols=151  Identities=23%  Similarity=0.386  Sum_probs=129.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .--.|++.++||+|+||..+...+. -++++||||.-...                                        
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl-~nne~VAIKfEPrk----------------------------------------   64 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNL-YNNEPVAIKFEPRK----------------------------------------   64 (449)
T ss_pred             ecccceeccccccCcceeeeccccc-ccCceEEEEecccc----------------------------------------
Confidence            3457999999999999999999865 45889999975432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                           ....++..|....+.| ..++|+..|.+...+.+-.+|||++ |.||.+++.-+ +.|+
T Consensus        65 ---------------------S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FS  122 (449)
T KOG1165|consen   65 ---------------------SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFS  122 (449)
T ss_pred             ---------------------CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCccc
Confidence                                 1224466777777777 5799999999999999999999999 99999998754 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-----CcEEEEecccceecCCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-----GYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-----~~~kl~DFG~a~~~~~~~  360 (362)
                      ..++..++.|++.-++++|++.+|+|||||+|+||...     ..+.++|||+|+.+.+|.
T Consensus       123 vKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  123 VKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             HHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            99999999999999999999999999999999999753     358999999999988764

>KOG0199|consensus

Probab=99.82  E-value=1.2e-20  Score=178.83  Aligned_cols=152  Identities=24%  Similarity=0.360  Sum_probs=130.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ++..+.+.||+|+||.|+.+.|...+++  .||+|+++...                                       
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~---------------------------------------  150 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDS---------------------------------------  150 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCc---------------------------------------
Confidence            3445666799999999999998876654  67899886531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                         .......|.+|+.+|.+++|||++++|++..+ ....+|||+++.|+|.+.+.+.  ..|.
T Consensus       151 -------------------l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~ll  210 (1039)
T KOG0199|consen  151 -------------------LNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILL  210 (1039)
T ss_pred             -------------------cchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhcccccee
Confidence                               11145679999999999999999999999877 5688999999999999999873  3478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      -.....|+.||+.|+.||.++++|||||-..|+|+.....|||+|||+.+-+...
T Consensus       211 v~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  211 VSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            8899999999999999999999999999999999999999999999999988643

>KOG0671|consensus

Probab=99.81  E-value=6.9e-20  Score=163.08  Aligned_cols=148  Identities=24%  Similarity=0.354  Sum_probs=125.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+...+|+|+||.|-.+.+... +..+|+|+++.-                                         
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~-~~~vAlKIik~V-----------------------------------------  125 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRET-KEHVALKIIKNV-----------------------------------------  125 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCC-CceehHHHHHHH-----------------------------------------
Confidence            46789999999999999999986654 889999998643                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC--c----ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC--D----FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                         ....+..+.|+++++++.+  |    -++.+.+||...++.+||+|.+ |.|+.+++..++
T Consensus       126 -------------------~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~  185 (415)
T KOG0671|consen  126 -------------------DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENN  185 (415)
T ss_pred             -------------------HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCC
Confidence                               2234556789999999832  3    4788899999999999999998 889999998764


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--------------------CCcEEEEecccceecC
Q psy14740        302 --NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--------------------SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 --~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--------------------~~~~kl~DFG~a~~~~  357 (362)
                        +++...++.++.|++.+++|||+.+++|-||||+|||+.+                    +..++++|||.|..-.
T Consensus       186 y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~  263 (415)
T KOG0671|consen  186 YIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH  263 (415)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec
Confidence              6899999999999999999999999999999999999932                    2248999999997543

>KOG0603|consensus

Probab=99.81  E-value=4.9e-20  Score=173.96  Aligned_cols=147  Identities=31%  Similarity=0.452  Sum_probs=123.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|.+...+|.|+|+.|..+.. ..+++.+++|++.+..                                        
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~-~~t~~~~~vkii~~~~----------------------------------------  359 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCES-SPTDQEPAVKIISKRA----------------------------------------  359 (612)
T ss_pred             chhhccccccCCCCccceeeeec-cccccchhheeccccc----------------------------------------
Confidence            45678888899999999999984 4668889999986541                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                             ....+|+.++... +||||+++++++.++.+.|+|||.+.|+.+.+.+...+.+. .
T Consensus       360 -----------------------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~  415 (612)
T KOG0603|consen  360 -----------------------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-S  415 (612)
T ss_pred             -----------------------cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-H
Confidence                                   1223456555554 89999999999999999999999999998888777655454 7


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe-cCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~-~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .+..|+++|+.|+.|||++|++|||+||+|||+ +..++++|+|||.++.+...
T Consensus       416 e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  416 EASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            888899999999999999999999999999999 68999999999999887544

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.81  E-value=3e-19  Score=172.11  Aligned_cols=105  Identities=27%  Similarity=0.313  Sum_probs=84.4

Q ss_pred             hhHHHHHHHhhcCCcce-----eeeeeeeec--------cceEEEEEeccCCcchHHHHHhcC-----------------
Q psy14740        252 HIMSEKEIMGEANCDFI-----VKLYKTFKD--------KKYLYMLMESCLGGELWTILRDKG-----------------  301 (362)
Q Consensus       252 ~~~~E~~~l~~l~h~~i-----~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~-----------------  301 (362)
                      ....|+..+.+++|.++     +++.+++..        .+..|+||||+++++|.+++....                 
T Consensus       218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l  297 (507)
T PLN03224        218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI  297 (507)
T ss_pred             hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence            35567777777766554     556555432        356899999999999999886321                 


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 -------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 -------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                             .++...++.++.|++.+|.|+|+++|+||||||+||+++.++.++|+|||+++.+
T Consensus       298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~  359 (507)
T PLN03224        298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDM  359 (507)
T ss_pred             hhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCcccc
Confidence                   1345678889999999999999999999999999999999999999999999754

>KOG1164|consensus

Probab=99.81  E-value=3.1e-19  Score=164.79  Aligned_cols=145  Identities=26%  Similarity=0.413  Sum_probs=121.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      +|.+...||+|+||.||.+.+.......+|+|+.....                                          
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~------------------------------------------   56 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKEL------------------------------------------   56 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecc------------------------------------------
Confidence            89999999999999999999765444578888765421                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcC----Ccceeeeeeee-eccceEEEEEeccCCcchHHHHHhc--CC
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN----CDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDK--GN  302 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~--~~  302 (362)
                                       ......+..|..++..+.    .++++.+++.+ ..+++.|+||+.+ |.+|.++....  +.
T Consensus        57 -----------------~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~  118 (322)
T KOG1164|consen   57 -----------------GSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGR  118 (322)
T ss_pred             -----------------cCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCC
Confidence                             111124677888888875    36899999999 5888999999998 99999988654  46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-----CcEEEEecccce
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-----GYVKLVDFGFAK  354 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-----~~~kl~DFG~a~  354 (362)
                      ++..++..++.|++.+|+++|+.|++||||||+|+++...     ..+.|.|||+|+
T Consensus       119 fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  119 FSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             cCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9999999999999999999999999999999999999865     369999999999

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.80  E-value=7.9e-19  Score=152.89  Aligned_cols=150  Identities=40%  Similarity=0.688  Sum_probs=131.1

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+...+|.|++|.||++... ..++.+++|.+.....                                          
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~------------------------------------------   37 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDK-GTGELVAVKVLKKEKT------------------------------------------   37 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEc-CCCcEEEEEeeccccc------------------------------------------
Confidence            567889999999999999865 3467899998765310                                          


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC-CCHHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTR  309 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~  309 (362)
                                      ......+.+|++.++.++|+|++++++.+......++++|++++++|.+++..... +++..+.
T Consensus        38 ----------------~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~  101 (225)
T smart00221       38 ----------------EKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEAR  101 (225)
T ss_pred             ----------------hHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHH
Confidence                            01345678899999999999999999999988999999999998899999987666 8999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.+++.++.+||+++++|+||+|.||+++.++.++|+|||.+..+..+
T Consensus       102 ~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221      102 FYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            99999999999999999999999999999999999999999999877543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=5.2e-19  Score=149.50  Aligned_cols=95  Identities=16%  Similarity=0.121  Sum_probs=80.1

Q ss_pred             hhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEee
Q psy14740        252 HIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR  330 (362)
Q Consensus       252 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHr  330 (362)
                      .+.+|+++|+++. |+++++++++    +..|++|+|++|.+|.+.+..      . ...++.|++.+|.++|++||+||
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHr  115 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHN  115 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccC
Confidence            4788999999995 5889999886    347999999999998754321      1 13577899999999999999999


Q ss_pred             cC-CCCcEEecCCCcEEEEecccceecC
Q psy14740        331 DL-KPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       331 Di-kp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      || ||+|||++.++.++|+|||+|....
T Consensus       116 DL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274        116 DLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             CCCCcceEEEcCCCCEEEEECCCceecC
Confidence            99 7999999999999999999998554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.80  E-value=3.2e-19  Score=175.70  Aligned_cols=81  Identities=27%  Similarity=0.403  Sum_probs=68.3

Q ss_pred             eccceEEEEEeccCCcchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCC
Q psy14740        276 KDKKYLYMLMESCLGGELWTILRDKGN--------------------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE  335 (362)
Q Consensus       276 ~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~  335 (362)
                      ......++||||+++++|.+++.....                    .....+..++.|++.||.|||+++|+||||||+
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~  284 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ  284 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence            355679999999999999998875321                    123456789999999999999999999999999


Q ss_pred             cEEecC-CCcEEEEecccceec
Q psy14740        336 NLLLST-SGYVKLVDFGFAKKL  356 (362)
Q Consensus       336 NIl~~~-~~~~kl~DFG~a~~~  356 (362)
                      |||++. ++.+||+|||+|+.+
T Consensus       285 NILl~~~~~~~KL~DFGlA~~l  306 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAADL  306 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCcccc
Confidence            999985 679999999999865

>PRK09392 ftrB transcriptional activator FtrB; Provisional

Probab=99.79  E-value=9.5e-19  Score=154.47  Aligned_cols=126  Identities=16%  Similarity=0.149  Sum_probs=116.4

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      +.|+..|+|+.| ++++++.|+..+..+.|++|++|+++|++++.+|+|.+|.|+++... +|+ +..+..+++|++||+
T Consensus         7 ~~l~~~~~f~~L-~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~-~~~-~~~i~~~~~g~~~g~   83 (236)
T PRK09392          7 IRLRNLPLFADM-ADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASS-QDR-ETTLAILRPVSTFIL   83 (236)
T ss_pred             HHHhcCccccCC-CHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcC-CCc-eEEEEEeCCCchhhh
Confidence            468999999999 99999999999999999999999999999999999999999999865 434 478999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      .+++.+.|+.++++|+  ++|+++.|+.+.|.+++.++|.+...+...+..
T Consensus        84 ~~~~~~~~~~~~~~A~--~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~  132 (236)
T PRK09392         84 AAVVLDAPYLMSARTL--TRSRVLMIPAELVREAMSEDPGFMRAVVFELAG  132 (236)
T ss_pred             HHHhCCCCCceEEEEc--CceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH
Confidence            9999999999999999  569999999999999999999999887776654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.79  E-value=2.6e-18  Score=147.31  Aligned_cols=144  Identities=40%  Similarity=0.673  Sum_probs=125.7

Q ss_pred             ecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhh
Q psy14740        157 LGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETS  236 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~  236 (362)
                      ||+|.+|.||++... .+++.+++|.+.....                                                
T Consensus         1 l~~g~~~~v~~~~~~-~~~~~~~~K~~~~~~~------------------------------------------------   31 (215)
T cd00180           1 LGEGGFGTVYLARDK-KTGKKVAIKIIKKEDS------------------------------------------------   31 (215)
T ss_pred             CCcCCceEEEEEEec-CCCcEEEEEEeccccc------------------------------------------------
Confidence            689999999999855 3578899998865410                                                


Q ss_pred             hhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHHH
Q psy14740        237 ERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACV  315 (362)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql  315 (362)
                                ......+.+|+..++.+.|++++++++++......+++||++++++|.+++... ..++...+..++.++
T Consensus        32 ----------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  101 (215)
T cd00180          32 ----------SSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQI  101 (215)
T ss_pred             ----------hhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence                      003456889999999999999999999999989999999999889999999865 468999999999999


Q ss_pred             HHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceecCCC
Q psy14740        316 VEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       316 ~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~~~  359 (362)
                      +.++.+||+.|++|+||+|.||+++. ++.++|+|||.+......
T Consensus       102 ~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180         102 LEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            99999999999999999999999999 899999999999876543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0670|consensus

Probab=99.79  E-value=5.5e-19  Score=162.70  Aligned_cols=151  Identities=25%  Similarity=0.355  Sum_probs=128.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -.+|.+....|+|-|++|-.+.+. ..++.||||++.+..+                                       
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~-~r~~~vAiKIIRnNE~---------------------------------------  470 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQ-ARGQEVAIKIIRNNEV---------------------------------------  470 (752)
T ss_pred             cceeEEEeccccceeeeeeecccc-CCCCeeEEEEeecchH---------------------------------------
Confidence            367899999999999999999865 4567999999976422                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC------CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN------CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                           +...=+.|++||++|+      --|+++++..|....++|+|+|.+ ..+|.+++++.+
T Consensus       471 ---------------------M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG  528 (752)
T KOG0670|consen  471 ---------------------MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYG  528 (752)
T ss_pred             ---------------------HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhC
Confidence                                 3344567999999984      248999999999999999999998 789999999765


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecCCCC
Q psy14740        302 ---NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       302 ---~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~~~  360 (362)
                         .+....++.|+.|+..||.+|-.+||+|.||||+|||++.. ..+||||||.|.......
T Consensus       529 ~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene  591 (752)
T KOG0670|consen  529 RNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENE  591 (752)
T ss_pred             cccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccccc
Confidence               48889999999999999999999999999999999999864 568999999998765543

>KOG1027|consensus

Probab=99.78  E-value=3.9e-19  Score=171.86  Aligned_cols=111  Identities=29%  Similarity=0.512  Sum_probs=95.3

Q ss_pred             hhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHHC
Q psy14740        251 QHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-N---FDDATTRFYTACVVEAFDYLHSR  325 (362)
Q Consensus       251 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~---l~~~~~~~~~~ql~~al~~lH~~  325 (362)
                      ....+|+.+|+.. +||||+++|+.-.+..+.||..|.| ..+|.+++.... .   ......+..+.|++.||++||+.
T Consensus       547 ~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl  625 (903)
T KOG1027|consen  547 DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL  625 (903)
T ss_pred             HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc
Confidence            3467899999988 6999999999999999999999999 889999998631 1   11245678899999999999999


Q ss_pred             CcEeecCCCCcEEecC---C--CcEEEEecccceecCCCCCC
Q psy14740        326 NIIYRDLKPENLLLST---S--GYVKLVDFGFAKKLIGPRYS  362 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~---~--~~~kl~DFG~a~~~~~~~~~  362 (362)
                      +|+||||||.||||+.   +  .+++|+|||+|+++..+..|
T Consensus       626 ~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS  667 (903)
T KOG1027|consen  626 KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS  667 (903)
T ss_pred             ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence            9999999999999976   3  46899999999999876543

>KOG1025|consensus

Probab=99.78  E-value=2.4e-19  Score=172.82  Aligned_cols=151  Identities=21%  Similarity=0.303  Sum_probs=128.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCC---CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDP---SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...+...+||+|+||+||+..+....   +-+||||++...                                       
T Consensus       696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---------------------------------------  736 (1177)
T KOG1025|consen  696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---------------------------------------  736 (1177)
T ss_pred             hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc---------------------------------------
Confidence            34566778999999999999876541   236778776432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                         ........++.|+-+|..++|||++++.++..... +-||++|++.|+|.++++.++ ++-
T Consensus       737 -------------------t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~ig  796 (1177)
T KOG1025|consen  737 -------------------TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIG  796 (1177)
T ss_pred             -------------------CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhcccc
Confidence                               22233466899999999999999999999987665 889999999999999998754 588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ......|..||++|+.|||.++++||||-..|+|+..-..+|+.|||+|+-+..
T Consensus       797 sq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  797 SQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            889999999999999999999999999999999999999999999999987754

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=2.3e-18  Score=149.30  Aligned_cols=102  Identities=26%  Similarity=0.314  Sum_probs=89.2

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ...+.+|+.++..+.|++++....++...+..+++|||++|++|.+++.....    ....++.+++.+|.++|+.|++|
T Consensus        43 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H  118 (211)
T PRK14879         43 RERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIH  118 (211)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCccc
Confidence            34578899999999999988777777677788999999999999998865322    77889999999999999999999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceec
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +|++|.||+++ ++.++|+|||+++..
T Consensus       119 ~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879        119 GDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             CCCCcccEEEE-CCCEEEEECCcccCC
Confidence            99999999999 789999999998753

>KOG1167|consensus

Probab=99.77  E-value=8.1e-19  Score=158.18  Aligned_cols=145  Identities=26%  Similarity=0.419  Sum_probs=125.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ....|..+..+|+|+|+.||.+.....  ..+.+|+|.+...                                      
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--------------------------------------   75 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--------------------------------------   75 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--------------------------------------
Confidence            346788999999999999999885542  5678999987543                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                             ....++..|+++|..+ .+.||+++.+++..++.+.+||||++...-.++...   +
T Consensus        76 -----------------------s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l  129 (418)
T KOG1167|consen   76 -----------------------SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---L  129 (418)
T ss_pred             -----------------------cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc---C
Confidence                                   1235588999999998 699999999999999999999999988888887754   7


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEeccccee
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKK  355 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~  355 (362)
                      +...++.+++.++.||.++|.+|||||||||+|+|.+. .+.-.|+|||+|..
T Consensus       130 ~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  130 SLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             CHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence            78999999999999999999999999999999999985 57789999999974

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.76  E-value=7.9e-18  Score=147.95  Aligned_cols=109  Identities=43%  Similarity=0.815  Sum_probs=101.4

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ...+.+|+..++.++|||++++++.+......++++|++++++|.+++.....++...+..++.+++.++.+||+.+++|
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h  110 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIH  110 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeec
Confidence            46688899999999999999999999988999999999988899999987666899999999999999999999999999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +||+|+||+++.++.++|+|||.+..+..
T Consensus       111 ~~i~~~ni~~~~~~~~~l~d~~~~~~~~~  139 (244)
T smart00220      111 RDLKPENILLDEDGHVKLADFGLARQLDP  139 (244)
T ss_pred             CCcCHHHeEECCCCcEEEccccceeeecc
Confidence            99999999999999999999999987654

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0665|consensus

Probab=99.75  E-value=8e-19  Score=153.01  Aligned_cols=108  Identities=26%  Similarity=0.413  Sum_probs=95.1

Q ss_pred             chhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy14740        247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFD  320 (362)
Q Consensus       247 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~  320 (362)
                      ....++..+|..++..++|+||++++.+|--      ...+|+|||++ ..+|.+.+.  -.++-..+.+++.|++.|+.
T Consensus        56 ~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~--~elDH~tis~i~yq~~~~ik  132 (369)
T KOG0665|consen   56 QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM-DANLCQVIL--MELDHETISYILYQMLCGIK  132 (369)
T ss_pred             CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh-hhHHHHHHH--HhcchHHHHHHHHHHHHHHH
Confidence            3345667889999999999999999999843      24589999999 778888876  34788999999999999999


Q ss_pred             HHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       321 ~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |+|+.||+||||||+||++..++.+||.|||+|+.-.
T Consensus       133 ~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen  133 HLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence            9999999999999999999999999999999998643

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.75  E-value=7.9e-18  Score=144.60  Aligned_cols=99  Identities=18%  Similarity=0.216  Sum_probs=83.0

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ..++.+|..++..+.|+++....-++...+..+++|||++|++|.+++.....       .++.|++.+|.++|+.|++|
T Consensus        41 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H  113 (199)
T TIGR03724        41 RERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVH  113 (199)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeec
Confidence            35678899999999888765555555556667999999999999988764321       78899999999999999999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceec
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +|++|.||+++ ++.++++|||+++..
T Consensus       114 ~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       114 GDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            99999999999 889999999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.75  E-value=7.1e-18  Score=177.78  Aligned_cols=138  Identities=22%  Similarity=0.284  Sum_probs=115.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..+.....+|+|+||.||++... ..+..+|+|.+...+                                         
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~-----------------------------------------  727 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSI-KNGMQFVVKEINDVN-----------------------------------------  727 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEEC-CCCcEEEEEEccCCc-----------------------------------------
Confidence            34566778999999999999854 457789999874321                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                            .....|+.++++++||||+++++++.+++..|+||||+++++|.++++.   +++...
T Consensus       728 ----------------------~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~  782 (968)
T PLN00113        728 ----------------------SIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERR  782 (968)
T ss_pred             ----------------------cccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHH
Confidence                                  0112457889999999999999999999999999999999999999963   888999


Q ss_pred             HHHHHHHHHHHHHHH---HCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        309 RFYTACVVEAFDYLH---SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       309 ~~~~~ql~~al~~lH---~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ..++.|++.|++|||   +.+|+||||||+||+++.++..++. ||.+.
T Consensus       783 ~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~  830 (968)
T PLN00113        783 RKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG  830 (968)
T ss_pred             HHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence            999999999999999   6699999999999999988877765 55543

>KOG0200|consensus

Probab=99.75  E-value=9.2e-18  Score=166.88  Aligned_cols=152  Identities=26%  Similarity=0.419  Sum_probs=129.0

Q ss_pred             cEEEEEecccceecEEEEEecCCC------CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDP------SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~------~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..+.+.+|+|.||.|+++.-.+..      ...+|+|.++..                                      
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~--------------------------------------  339 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKEN--------------------------------------  339 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccc--------------------------------------
Confidence            345568999999999998744321      346777776543                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                          ......+.+..|+++|+.+ .||||+.+.++....+.+++|+||+..|+|..+++..+  
T Consensus       340 --------------------~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~  399 (609)
T KOG0200|consen  340 --------------------ASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVT  399 (609)
T ss_pred             --------------------cCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhcccc
Confidence                                2234567789999999998 69999999999988899999999999999999998755  


Q ss_pred             --------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        302 --------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       302 --------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                                    .++..+...++.||+.|++||++..++||||-..|||+..+..+||+|||+|+......
T Consensus       400 ~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~  472 (609)
T KOG0200|consen  400 ESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKD  472 (609)
T ss_pred             ccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCC
Confidence                          38889999999999999999999999999999999999999999999999999665443

>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional

Probab=99.75  E-value=4.5e-17  Score=141.23  Aligned_cols=118  Identities=24%  Similarity=0.328  Sum_probs=107.3

Q ss_pred             ccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCC-Ccc
Q psy14740         15 HLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD-DLR   93 (362)
Q Consensus        15 ~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~-~~r   93 (362)
                      .+ ++++++.++..++.+.|++|++|+.+|++.+.+|+|++|.|+++..+.+ |++..+..++||++|||.+++.+ .++
T Consensus         7 ~~-~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~-g~~~~~~~~~~g~~~g~~~~~~~~~~~   84 (211)
T PRK11753          7 PQ-TDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEE-GKEMILSYLNQGDFIGELGLFEEGQER   84 (211)
T ss_pred             CC-CHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCC-CCEEEEEEcCCCCEEeehhhccCCCCc
Confidence            35 9999999999999999999999999999999999999999999998887 55588999999999999999986 478


Q ss_pred             eeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        94 ~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +++++|.  ++|+++.|+.++|.+++..+|.+...++..+..+
T Consensus        85 ~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~  125 (211)
T PRK11753         85 SAWVRAK--TACEVAEISYKKFRQLIQVNPDILMALSAQMARR  125 (211)
T ss_pred             eEEEEEc--CcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            8999999  6699999999999999999999988777666544

>KOG1290|consensus

Probab=99.74  E-value=1.6e-17  Score=152.09  Aligned_cols=133  Identities=28%  Similarity=0.387  Sum_probs=112.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -.+|.++++||-|.|++||++.+. ...+.||+|+.+-.++                                       
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDt-q~~r~VAlKVvKSAqh---------------------------------------  116 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDT-QNKRYVALKVVKSAQH---------------------------------------  116 (590)
T ss_pred             CceEEEEEeccccccceeEEEeec-cCCeEEEEEEEehhhH---------------------------------------
Confidence            378999999999999999999865 4578999999765422                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-----C---cceeeeeeeeec----cceEEEEEeccCCcchHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-----C---DFIVKLYKTFKD----KKYLYMLMESCLGGELWT  295 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~  295 (362)
                                           ..+..+.|+.+|+++.     |   .+||++++.|..    +.++++|+|++ |.+|..
T Consensus       117 ---------------------YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLk  174 (590)
T KOG1290|consen  117 ---------------------YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLK  174 (590)
T ss_pred             ---------------------HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHH
Confidence                                 2345678999998872     3   479999998864    46899999999 999999


Q ss_pred             HHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCC
Q psy14740        296 ILRDK--GNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTS  342 (362)
Q Consensus       296 ~l~~~--~~l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~  342 (362)
                      +|+..  +.++...++.|++||+.||.|||. +||||-||||+|||+..+
T Consensus       175 lI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  175 LIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            99864  469999999999999999999995 699999999999999754

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.74  E-value=1e-17  Score=143.83  Aligned_cols=160  Identities=17%  Similarity=0.109  Sum_probs=109.8

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+.+.||+|+||.||.+...  +++.+|+|++..+...                           +...... .    +
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~---------------------------~~~~~~~-~----~   62 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP--DGNPVALKFHRLGRTS---------------------------FRKVKRK-R----D   62 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC--CCCEEEEEEEecccch---------------------------hhhhcch-H----H
Confidence            667788999999999999753  5889999987653200                           0000000 0    0


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                      +..    .+.. .............|..++..+.|+  .++..++    ....+++|||++|++|..+...      ...
T Consensus        63 ~~~----~~~~-~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~  127 (198)
T cd05144          63 YLG----DRKH-ASWLYLSRLAAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDP  127 (198)
T ss_pred             HHh----cccc-chhHHHhHHHHHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc------ccH
Confidence            000    0000 000011223467788888888777  3444443    2346899999999998765421      345


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.+++.++.++|+.|++|+||||+||+++.++.++|+|||+|..+..+
T Consensus       128 ~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~~  178 (198)
T cd05144         128 EEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDHP  178 (198)
T ss_pred             HHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCCc
Confidence            678889999999999999999999999999999999999999999877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.74  E-value=1.5e-17  Score=163.73  Aligned_cols=98  Identities=22%  Similarity=0.230  Sum_probs=86.8

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIY  329 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiH  329 (362)
                      ..++.+|++++..++|++++....++......++||||++|++|.+++.        ....++.|++.+|.+||++|++|
T Consensus       380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiH  451 (535)
T PRK09605        380 TERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVH  451 (535)
T ss_pred             HHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCcc
Confidence            3567899999999999999887777666677899999999999999875        34678899999999999999999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceec
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |||||+|||+ .++.++|+|||+|+..
T Consensus       452 rDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        452 GDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCCChHHEEE-ECCcEEEEeCcccccC
Confidence            9999999999 6788999999999864

>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

Probab=99.73  E-value=7.1e-17  Score=139.84  Aligned_cols=131  Identities=26%  Similarity=0.352  Sum_probs=115.2

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA   86 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~   86 (362)
                      +...++|..+ +.+.+..+......+.+++|++||++||+++.+|+|.+|.|+++....+ |++.++..++||++|||.+
T Consensus         2 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~-G~~~~~~~~~~g~~fg~~~   79 (214)
T COG0664           2 LKENPLLNLL-PSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTED-GREIILGFLGPGDFFGELA   79 (214)
T ss_pred             cccccccccC-CHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCC-CcEEEEEEecCCchhhhHH
Confidence            3456777767 7888888888889999999999999999999999999999999999998 5568999999999999999


Q ss_pred             ccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhh
Q psy14740         87 LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNE  141 (362)
Q Consensus        87 l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~  141 (362)
                      ++.+.|++++++|+  +++++|.++++.|..++...|.+...++..+..+.....
T Consensus        80 l~~~~~~~~~~~a~--~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~l~~~~  132 (214)
T COG0664          80 LLGGDPRSASAVAL--TDVEVLEIPRKDFLELLAESPKLALALLRLLARRLRQAL  132 (214)
T ss_pred             HhcCCCccceEEEc--ceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999999  559999999999999887789998888877765544433

>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor

Probab=99.73  E-value=6.8e-17  Score=125.20  Aligned_cols=114  Identities=27%  Similarity=0.452  Sum_probs=105.9

Q ss_pred             cccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCC
Q psy14740         12 YFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD   91 (362)
Q Consensus        12 lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~   91 (362)
                      +|..+ +++++..++..++.+.|++|++|+.+|++.+.+|+|.+|.+++...+.+ +.+..+..+.+|++||+..++.+.
T Consensus         1 ~f~~l-~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~g~~~~~~~~   78 (115)
T cd00038           1 LFSGL-DDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDED-GREQIVGFLGPGDLFGELALLGNG   78 (115)
T ss_pred             CcccC-CHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCC-CcEEEEEecCCccCcChHHHhcCC
Confidence            57888 9999999999999999999999999999999999999999999998887 455889999999999999999889


Q ss_pred             cceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhh
Q psy14740         92 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  129 (362)
Q Consensus        92 ~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~  129 (362)
                      ++.++++|.  ++|.+|.|+++.|..++.++|.+...+
T Consensus        79 ~~~~~~~a~--~~~~~~~i~~~~~~~~~~~~~~~~~~~  114 (115)
T cd00038          79 PRSATVRAL--TDSELLVLPRSDFRRLLQEYPELARRL  114 (115)
T ss_pred             CCCceEEEc--CceEEEEEeHHHHHHHHHHCcHhHHhc
Confidence            999999999  559999999999999999999987654

In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.70  E-value=1.8e-16  Score=139.62  Aligned_cols=103  Identities=16%  Similarity=0.229  Sum_probs=82.6

Q ss_pred             hhhhHHHHHHHhhcCCcce--eeeeeeeecc-ce---EEEEEeccCC-cchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDFI--VKLYKTFKDK-KY---LYMLMESCLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYL  322 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i--~~~~~~~~~~-~~---~~lv~e~~~~-~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~l  322 (362)
                      ..++.+|+.++..+.|++|  +..++..... ..   .++|||+++| .+|.+++.. .++++..    +.|++.+|.+|
T Consensus        84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~l  158 (239)
T PRK01723         84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARF  158 (239)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHH
Confidence            4567899999999988775  6666653322 22   3599999987 689888765 3555543    56899999999


Q ss_pred             HHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       323 H~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |++||+||||||.|||++.++.++|+|||.++...
T Consensus       159 H~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        159 HDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            99999999999999999998999999999998654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.70  E-value=8.9e-17  Score=136.60  Aligned_cols=99  Identities=18%  Similarity=0.124  Sum_probs=72.3

Q ss_pred             HHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccCCcchHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEe
Q psy14740        254 MSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHS-RNIIY  329 (362)
Q Consensus       254 ~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~l~~~~~~~~~~ql~~al~~lH~-~~iiH  329 (362)
                      ..|...+..+.+.  .+++++...    ..+++|||++++++.. .+... ... ..+..++.+++.++.++|. ++|+|
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH  138 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDLN----RHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVH  138 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEecC----CCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCc
Confidence            3455666665433  345555432    3589999998854321 11111 111 6678899999999999999 99999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +||||+||+++ ++.++|+|||.+.....+
T Consensus       139 ~Dl~p~Nili~-~~~~~liDfg~a~~~~~~  167 (187)
T cd05119         139 GDLSEYNILVD-DGKVYIIDVPQAVEIDHP  167 (187)
T ss_pred             CCCChhhEEEE-CCcEEEEECcccccccCc
Confidence            99999999999 899999999999877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10402 DNA-binding transcriptional activator YeiL; Provisional

Probab=99.70  E-value=2.1e-16  Score=138.51  Aligned_cols=110  Identities=19%  Similarity=0.273  Sum_probs=101.2

Q ss_pred             HHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCC
Q psy14740         24 TIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPE  103 (362)
Q Consensus        24 ~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~  103 (362)
                      .|++.++.+.|++|++|+.+||+.+.+|+|.+|.|+++..+.+ |++.++..+.||++|||.+++.+.+++++++|.  +
T Consensus        26 ~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~-G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~--~  102 (226)
T PRK10402         26 DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLAN-GKVSLIDFFAAPCFIGEIELIDKDHETKAVQAI--E  102 (226)
T ss_pred             HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCC-CCEeeeeecCCCCeEEeehhhcCCCCCccEEEe--c
Confidence            4777889999999999999999999999999999999999888 555889999999999999999999999999999  5


Q ss_pred             CeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740        104 GVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus       104 ~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +|+++.|+.+.|.+++..+|.+...++..+..+
T Consensus       103 ~~~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~~  135 (226)
T PRK10402        103 ECWCLALPMKDCRPLLLNDALFLRKLCKFLSHK  135 (226)
T ss_pred             cEEEEEEEHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            699999999999999999999999887776654

>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]

Probab=99.69  E-value=1.9e-16  Score=117.90  Aligned_cols=90  Identities=34%  Similarity=0.462  Sum_probs=84.6

Q ss_pred             eEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEEEEe
Q psy14740         32 TFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVID  111 (362)
Q Consensus        32 ~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~  111 (362)
                      ++|++|++|+++|++.+.+|+|++|.+++...+.+ ++...+..+.+|++||+.+++.+.++.++++|.  ++|+++.|+
T Consensus         2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~--~~~~~~~i~   78 (91)
T PF00027_consen    2 KTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINED-GKEQIIFFLGPGDIFGEIELLTGKPSPFTVIAL--TDSEVLRIP   78 (91)
T ss_dssp             EEESTTEEEEETTSBESEEEEEEESEEEEEEETTT-SEEEEEEEEETTEEESGHHHHHTSBBSSEEEES--SSEEEEEEE
T ss_pred             eEECCCCEEEeCCCcCCEEEEEEECceEEEeceec-ceeeeecceeeeccccceeecCCCccEEEEEEc--cCEEEEEEe
Confidence            68999999999999999999999999999999987 555789999999999999999999999999999  569999999


Q ss_pred             hhhHHHHhhchHH
Q psy14740        112 QETFNQLISSLDE  124 (362)
Q Consensus       112 ~~~f~~l~~~~p~  124 (362)
                      +++|.+++.++|+
T Consensus        79 ~~~~~~~~~~~p~   91 (91)
T PF00027_consen   79 REDFLQLLQQDPE   91 (91)
T ss_dssp             HHHHHHHHHHSHH
T ss_pred             HHHHHHHHHhCcC
Confidence            9999999999885

The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.69  E-value=8.5e-16  Score=140.53  Aligned_cols=149  Identities=40%  Similarity=0.657  Sum_probs=127.2

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+...+|.|+||.||.+...    ..+++|.+.+....                                         
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~-----------------------------------------   36 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLES-----------------------------------------   36 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhcc-----------------------------------------
Confidence            678899999999999999865    56788887654211                                         


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCc-ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC---CCCHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD-FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG---NFDDA  306 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~  306 (362)
                                     .......+.+|+.++..+.|+ +|+++++.+......+++++++.++++.+++....   .++..
T Consensus        37 ---------------~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  101 (384)
T COG0515          37 ---------------KSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSES  101 (384)
T ss_pred             ---------------chhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHH
Confidence                           012456688899999999988 79999999988888899999999999998777654   69999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~~  359 (362)
                      ....++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.++.+...
T Consensus       102 ~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515         102 EALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            9999999999999999999999999999999999888 7999999999866543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.68  E-value=2.7e-16  Score=162.06  Aligned_cols=126  Identities=16%  Similarity=0.207  Sum_probs=115.7

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .++++++|+++ +++.+.+|+..++.+.|++||.|+.|||+++.+|||.+|+|++.... + +.+.++..+++|++|||+
T Consensus       375 ~l~~~~lF~~~-s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~-~-~~e~~l~~l~~Gd~FGE~  451 (823)
T PLN03192        375 VVEKVYLFKGV-SREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSE-G-EKERVVGTLGCGDIFGEV  451 (823)
T ss_pred             HHhhCcchhcC-CHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEec-C-CcceeeEEccCCCEecch
Confidence            46789999999 99999999999999999999999999999999999999999997532 3 566889999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +++.+.|+++||+|.  +.|+++.|++++|.++++.+|+....++..+..+
T Consensus       452 ~~l~~~p~~~t~ra~--~~s~ll~l~~~~f~~ll~~~p~d~~~i~~~~l~~  500 (823)
T PLN03192        452 GALCCRPQSFTFRTK--TLSQLLRLKTSTLIEAMQTRQEDNVVILKNFLQH  500 (823)
T ss_pred             HHhcCCCCCCeEEEc--ccEEEEEEEHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            999999999999999  5599999999999999999999998888877654

>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional

Probab=99.68  E-value=8.5e-16  Score=135.53  Aligned_cols=126  Identities=16%  Similarity=0.184  Sum_probs=110.3

Q ss_pred             ccccccccccCCHHHHHHHHhhcc-eeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSS-QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~-~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      +++.+.|..+ ++++++.|...+. .+.|++|++||++||+.+++|+|.+|.|+++..+.+ |++.++..+.||++||+.
T Consensus        15 ~~~~~~~~~l-~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~-G~e~i~~~~~~gd~~g~~   92 (235)
T PRK11161         15 ISQLCIPFTL-NEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ-GDEQITGFHLAGDLVGFD   92 (235)
T ss_pred             ccccccccCC-CHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCC-CCEEEEEeccCCceeccc
Confidence            7777777788 9999999999886 568999999999999999999999999999999888 566889999999999998


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      +++.+ ++.++++|+  ++++++.|+++.|.+++..+|.+...++..+..+.
T Consensus        93 ~~~~~-~~~~~~~a~--~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~~  141 (235)
T PRK11161         93 AIGSG-QHPSFAQAL--ETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGEI  141 (235)
T ss_pred             cccCC-CCcceEEEe--ccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHHH
Confidence            76544 556789999  56999999999999999999999988877766543

>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain

Probab=99.67  E-value=1.3e-15  Score=118.73  Aligned_cols=116  Identities=32%  Similarity=0.426  Sum_probs=104.2

Q ss_pred             cccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc--C
Q psy14740         12 YFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ--G   89 (362)
Q Consensus        12 lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~--~   89 (362)
                      +|.++ +++.++.++..++.+.|++|++|+++|++.+.+|+|.+|.+++...+.+ +.+..+..+.+|++||+..++  .
T Consensus         1 ~f~~l-~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~-g~~~~~~~~~~g~~~g~~~~~~~~   78 (120)
T smart00100        1 LFKNL-DAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLED-GREQILGILGPGDFFGELALLTNS   78 (120)
T ss_pred             CcCCC-CHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCC-CceEEEEeecCCceechhhhccCC
Confidence            47888 9999999999999999999999999999999999999999999988776 556889999999999999988  4


Q ss_pred             CCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhh
Q psy14740         90 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  131 (362)
Q Consensus        90 ~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~  131 (362)
                      ..++..+++|.  ++++++.++.+.|...+...+.+..+.+.
T Consensus        79 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  118 (120)
T smart00100       79 RRAASATAVAL--ELATLLRIDFRDFLQLLQENPQLLLELLL  118 (120)
T ss_pred             CcccceEEEEE--eeEEEEccCHHHHHHHHHHhHHHHHHHHh
Confidence            46788889998  55999999999999999999988766543

Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.

>KOG1166|consensus

Probab=99.66  E-value=2.3e-16  Score=158.87  Aligned_cols=145  Identities=21%  Similarity=0.293  Sum_probs=116.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ....|.+-+.+|.|+||.||.+....  ++.+|+|+-.+....                  .                  
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~--~~~~alK~e~P~~~W------------------E------------------  737 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSN--GKLVALKVEKPPNPW------------------E------------------  737 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCC--CcEEEEEeecCCCce------------------e------------------
Confidence            44678899999999999999998543  889999987664211                  1                  


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC---CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN---CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                                +..-.+++.+|+   -|.|..++..+...+.-++|+||.+.|+|.++++..+.+
T Consensus       738 --------------------------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m  791 (974)
T KOG1166|consen  738 --------------------------FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVM  791 (974)
T ss_pred             --------------------------eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCC
Confidence                                      111112222332   256777778888888899999999999999999987889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-------CCcEEEEeccccee
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-------SGYVKLVDFGFAKK  355 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-------~~~~kl~DFG~a~~  355 (362)
                      ++..+.++..|++.-+++||.++|||+||||+|+|+..       +-.++|+|||.+-.
T Consensus       792 ~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD  850 (974)
T KOG1166|consen  792 DEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID  850 (974)
T ss_pred             CchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence            99999999999999999999999999999999999953       23589999999854

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.62  E-value=3.5e-15  Score=121.56  Aligned_cols=132  Identities=20%  Similarity=0.228  Sum_probs=108.9

Q ss_pred             EEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      +...+|.|.++.||.+...+   ..+++|...+..                                             
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~---~~~~iK~~~~~~---------------------------------------------   33 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD---EDYVLKINPSRE---------------------------------------------   33 (155)
T ss_pred             cceecccccccceEEEEecC---CeEEEEecCCCC---------------------------------------------
Confidence            35679999999999998543   578999865431                                             


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCC--cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANC--DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF  310 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  310 (362)
                                   .   ...+..|..++..+.|  +++++++.+....+..+++|||+++.++..+       +......
T Consensus        34 -------------~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~   90 (155)
T cd05120          34 -------------K---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKED   90 (155)
T ss_pred             -------------c---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHH
Confidence                         0   2457789999999976  5899999988888889999999988777653       4556677


Q ss_pred             HHHHHHHHHHHHHHC---CcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        311 YTACVVEAFDYLHSR---NIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       311 ~~~ql~~al~~lH~~---~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ++.+++.++..+|..   +++|+|++|+||+++..+.++++|||.++.
T Consensus        91 ~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          91 IAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            889999999999985   799999999999999989999999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN02868 acyl-CoA thioesterase family protein

Probab=99.60  E-value=6.2e-15  Score=140.28  Aligned_cols=117  Identities=23%  Similarity=0.338  Sum_probs=104.4

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|+++ +++++++|+..++.+.|++|++||++||+.+.+|+|++|.|++.+.+.+|  +..+..+++|++|||.
T Consensus         9 ~L~~~~~F~~L-~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g--e~~l~~l~~Gd~fG~~   85 (413)
T PLN02868          9 FLGSVPLLQRL-PSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE--SRPEFLLKRYDYFGYG   85 (413)
T ss_pred             HHhcCcccccC-CHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC--cEEEEEeCCCCEeehh
Confidence            47899999999 99999999999999999999999999999999999999999999988774  4789999999999985


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  129 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~  129 (362)
                        +.+.++.++++|.  ++|+++.|+++.|..+....+-..++.
T Consensus        86 --l~~~~~~~~~~A~--~d~~v~~ip~~~~~~~~~~~~~~~~~~  125 (413)
T PLN02868         86 --LSGSVHSADVVAV--SELTCLVLPHEHCHLLSPKSIWDSDKT  125 (413)
T ss_pred             --hCCCCcccEEEEC--CCEEEEEEcHHHHhhhcccccccccCC
Confidence              6888999999999  669999999999987776655444433

>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial

Probab=99.58  E-value=1.5e-14  Score=123.64  Aligned_cols=98  Identities=21%  Similarity=0.268  Sum_probs=88.3

Q ss_pred             CCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCc--ceeeEEecCCCCeEEEEEehhh
Q psy14740         37 GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL--RTANIVAADPEGVSCLVIDQET  114 (362)
Q Consensus        37 g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~--r~~~~~A~~~~~~~~~~i~~~~  114 (362)
                      |+.||++||+.+++|+|.+|.|++++.+.+ |++..+..++||++|||.+++.+.+  +.++++|.  ++|+++.|+++.
T Consensus         1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~-G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~--~~~~v~~i~~~~   77 (193)
T TIGR03697         1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYES-GEEITVALLRENSVFGVLSLITGHRSDRFYHAVAF--TRVELLAVPIEQ   77 (193)
T ss_pred             CCceecCCCCCCcEEEEEecEEEEEEeCCC-CcEeeeEEccCCCEeeeeeeccCCCCccceEEEEe--cceEEEEeeHHH
Confidence            789999999999999999999999999888 5558899999999999999998764  56889999  669999999999


Q ss_pred             HHHHhhchHHHHHhhhhhhhHHh
Q psy14740        115 FNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus       115 f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      |..++..+|.+...++..+..+.
T Consensus        78 ~~~l~~~~p~l~~~~~~~l~~~l  100 (193)
T TIGR03697        78 VEKAIEEDPDLSMLLLQGLSSRI  100 (193)
T ss_pred             HHHHHHHChHHHHHHHHHHHHHH
Confidence            99999999999998888776543

Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.

>KOG0498|consensus

Probab=99.58  E-value=3.5e-15  Score=146.35  Aligned_cols=122  Identities=16%  Similarity=0.316  Sum_probs=111.2

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeee-
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFG-   83 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fG-   83 (362)
                      +-++++|+|++. ++.-|.+|+..++..-|.+|++|++|||+.+.||||.+|.+++...+.  |.+..++.|+|||+|| 
T Consensus       419 ~lv~~vpLF~~m-d~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~--g~~~~~~~L~~Gd~~Ge  495 (727)
T KOG0498|consen  419 DLVRKVPLFAGM-DDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDG--GGFFVVAILGPGDFFGE  495 (727)
T ss_pred             HHHhhCchhhcC-CHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccC--CceEEEEEecCCCccch
Confidence            346889999999 999999999999999999999999999999999999999999987664  4557899999999999 


Q ss_pred             cccccCC-CcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhh
Q psy14740         84 EKALQGD-DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  131 (362)
Q Consensus        84 E~~l~~~-~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~  131 (362)
                      |+.+... -|.++||+|+  +.|+++.|.+++|..+++..|.+..++++
T Consensus       496 El~~~~~~~p~t~TVral--t~~el~~L~~~dL~~V~~~f~~~~~~~l~  542 (727)
T KOG0498|consen  496 ELLTWCLDLPQTRTVRAL--TYCELFRLSADDLKEVLQQFRRLGSKFLQ  542 (727)
T ss_pred             HHHHHHhcCCCCceeehh--hhhhHHhccHHHHHHHHHHhHHHHHHHHH
Confidence            7777766 7889999999  55999999999999999999999888776

>PRK09391 fixK transcriptional regulator FixK; Provisional

Probab=99.57  E-value=4.6e-14  Score=123.92  Aligned_cols=106  Identities=16%  Similarity=0.204  Sum_probs=93.4

Q ss_pred             HhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCe
Q psy14740         26 VYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGV  105 (362)
Q Consensus        26 ~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~  105 (362)
                      ...++.+.|++|++||.+||+++++|+|++|.|+++..+.+ |++.++..+.||++||+.   .+.+++++++|+  ++|
T Consensus        35 ~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~-G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A~--~ds  108 (230)
T PRK09391         35 GLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSD-GRRQIGAFHLPGDVFGLE---SGSTHRFTAEAI--VDT  108 (230)
T ss_pred             cceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCC-CcEEEEEEecCCceeccc---CCCcCCeEEEEc--Cce
Confidence            34457899999999999999999999999999999999988 455789999999999974   466789999999  569


Q ss_pred             EEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740        106 SCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus       106 ~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      +++.|+.+.|..++..+|.+...++..+..+.
T Consensus       109 ~v~~i~~~~f~~l~~~~p~l~~~l~~~l~~~l  140 (230)
T PRK09391        109 TVRLIKRRSLEQAAATDVDVARALLSLTAGGL  140 (230)
T ss_pred             EEEEEEHHHHHHHHhhChHHHHHHHHHHHHHH
Confidence            99999999999999999999998887766543

>KOG1113|consensus

Probab=99.56  E-value=6e-15  Score=130.16  Aligned_cols=115  Identities=30%  Similarity=0.488  Sum_probs=105.7

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      +.|+++|++..| ...++..+++......|++|+.|+.||++++.||+|.+|+|.+.+...  +  ..+ .+++||+|||
T Consensus       240 ~~l~s~pil~~l-~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~--~--v~v-kl~~~dyfge  313 (368)
T KOG1113|consen  240 PFLESVPILESL-EKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRD--G--VEV-KLKKGDYFGE  313 (368)
T ss_pred             hhhhcchhhHHH-HHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhccC--C--eEE-Eechhhhcch
Confidence            468899999999 999999999999999999999999999999999999999999987762  2  556 9999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  127 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~  127 (362)
                      ++++.+.||.|||.|.++  ..|..+++..|++++....++..
T Consensus       314 ~al~~~~pr~Atv~a~~~--~kc~~~dk~~ferllgpc~dilk  354 (368)
T KOG1113|consen  314 LALLKNLPRAATVVAKGR--LKCAKLDKPRFERLLGPCQDILK  354 (368)
T ss_pred             HHHHhhchhhceeeccCC--ceeeeeChHHHHHHhhHHHHHHH
Confidence            999999999999999954  99999999999999998877654

>PRK13918 CRP/FNR family transcriptional regulator; Provisional

Probab=99.53  E-value=8.4e-14  Score=119.86  Aligned_cols=97  Identities=19%  Similarity=0.272  Sum_probs=81.7

Q ss_pred             hcceeEecCCCEEEecCC--CCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCe
Q psy14740         28 FSSQTFYKEGDYIIRQGA--RGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGV  105 (362)
Q Consensus        28 ~~~~~~~~~g~~i~~~g~--~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~  105 (362)
                      ..+.+.|++|++||++||  +++.+|+|++|.|++++.+.+ |++.++..+.||++|||.+++ +.++++++.|+  ++|
T Consensus         5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~-G~e~~l~~~~~Gd~~G~~~~~-~~~~~~~~~A~--~~~   80 (202)
T PRK13918          5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDE-GNALTLRYVRPGEYFGEEALA-GAERAYFAEAV--TDS   80 (202)
T ss_pred             ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCC-CCEEEEEEecCCCeechHHhc-CCCCCceEEEc--Cce
Confidence            457889999999999999  679999999999999999988 555899999999999997665 57889999999  669


Q ss_pred             EEEEEehhhHHHHhhchHHHHHhhhhhhh
Q psy14740        106 SCLVIDQETFNQLISSLDEIRTKYVDETS  134 (362)
Q Consensus       106 ~~~~i~~~~f~~l~~~~p~~~~~~~~~~~  134 (362)
                      +++.|+++.|      +|.+...++..+.
T Consensus        81 ~v~~i~~~~~------~~~~~~~l~~~l~  103 (202)
T PRK13918         81 RIDVLNPALM------SAEDNLVLTQHLV  103 (202)
T ss_pred             EEEEEEHHHc------ChhhHHHHHHHHH
Confidence            9999999987      3555555544443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.50  E-value=6e-14  Score=134.05  Aligned_cols=102  Identities=18%  Similarity=0.203  Sum_probs=73.1

Q ss_pred             hhHHHHHHHhhcC-----Ccc--eeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHH
Q psy14740        252 HIMSEKEIMGEAN-----CDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVE-AFDYL  322 (362)
Q Consensus       252 ~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~-al~~l  322 (362)
                      .+.+|+..+..+.     +|+  ++++|.  ......++||||++|.+|.++.... ...+   ...++.+++. .+..+
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV  273 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence            4667777776652     343  333332  2334579999999999998876532 1222   2334455544 46788


Q ss_pred             HHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       323 H~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      |..|++|+|+||.||+++.++.++++|||++..+.+
T Consensus       274 ~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       274 LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            999999999999999999999999999999988754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0500|consensus

Probab=99.50  E-value=1.6e-13  Score=125.82  Aligned_cols=119  Identities=24%  Similarity=0.425  Sum_probs=107.7

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      +.|+++++|+.- .+.-|.+|.-.++..-|.||++|.+.||.+..||||.+|.+.|...+   |. .+...+..|++|||
T Consensus       307 dTLkkV~iF~~c-e~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dD---g~-t~~~~L~~G~~FGE  381 (536)
T KOG0500|consen  307 DTLKKVRIFQDC-EAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADD---GV-TVFVTLKAGSVFGE  381 (536)
T ss_pred             HHHHhhhHHHhc-chhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecC---Cc-EEEEEecCCceeee
Confidence            468999999999 99999999999999999999999999999999999999999997544   33 56889999999999


Q ss_pred             ccccC------CCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhh
Q psy14740         85 KALQG------DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  130 (362)
Q Consensus        85 ~~l~~------~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~  130 (362)
                      ++++.      +..|+|+++.+  .-+.+++++++++.+.+...|+.+..+.
T Consensus       382 isIlni~g~~~gNRRtanvrSv--GYSDlfvLskdDl~~aL~eYP~a~~~L~  431 (536)
T KOG0500|consen  382 ISILNIKGNKNGNRRTANVRSV--GYSDLFVLSKDDLWEALSEYPDARKRLE  431 (536)
T ss_pred             eEEEEEcCcccCCcceeeeeee--ccceeeEeeHHHHHHHHHhCCHHHHHHH
Confidence            99882      46899999999  5599999999999999999999877655

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.50  E-value=2.8e-14  Score=138.04  Aligned_cols=174  Identities=16%  Similarity=0.257  Sum_probs=100.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +.+|.. +.+|+|++|.||.+... ++|+.||+|+..++-.                          +.+..-+..+..+
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~-~~G~~VAVKV~rP~i~--------------------------~~I~~Dl~~l~~~  170 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLK-DNGREVVVKVLRPDIL--------------------------PVIDADLALMYRL  170 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEEC-CCCCEEEEEEeCcchH--------------------------HHHHHHHHHHHHH
Confidence            455666 78999999999999855 4588999999987511                          0000000000000


Q ss_pred             ---hhhccchhhhhccccccccchhh------hhhHHHHHHHhhc----CCcceeeeeeeee-ccceEEEEEeccCCcch
Q psy14740        228 ---RTKYVDETSERRRAPQIVETRQQ------QHIMSEKEIMGEA----NCDFIVKLYKTFK-DKKYLYMLMESCLGGEL  293 (362)
Q Consensus       228 ---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~E~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L  293 (362)
                         ..+...  ..++..+...-....      -.+.+|+..+.++    .+.+.+.+-.+|. .....++||||++|+++
T Consensus       171 a~~l~~~~~--~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l  248 (537)
T PRK04750        171 ARWVERLLP--DGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPV  248 (537)
T ss_pred             HHHHHHhCc--ccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccH
Confidence               000000  000000000111111      2344555544444    2333333333332 24457899999999999


Q ss_pred             HHH--HHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecCC
Q psy14740        294 WTI--LRDKG----NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLIG  358 (362)
Q Consensus       294 ~~~--l~~~~----~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~~  358 (362)
                      .++  +...+    .+.+..+..++.|+       +..|++|+|+||.||+++.+|    .++++|||++..+..
T Consensus       249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        249 SDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            874  23322    24445555555555       468999999999999999888    999999999988754

>KOG0590|consensus

Probab=99.47  E-value=4.7e-14  Score=139.11  Aligned_cols=104  Identities=27%  Similarity=0.414  Sum_probs=92.9

Q ss_pred             hHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecC
Q psy14740        253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDL  332 (362)
Q Consensus       253 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDi  332 (362)
                      +..|..+-..+.|||++.......+....+-.||||++ +|..++.+.+.+....+..++.|++.|+.|+|+.||.|||+
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            55677777788999998888877776666666999998 99999998778999999999999999999999999999999


Q ss_pred             CCCcEEecCCCcEEEEecccceecC
Q psy14740        333 KPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       333 kp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ||+|+++..+|.+||+|||.+..+.
T Consensus       447 K~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  447 KLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             ccccEEEecCCceEEeecCcceeec
Confidence            9999999999999999999987654

>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]

Probab=99.45  E-value=5.8e-13  Score=124.52  Aligned_cols=131  Identities=22%  Similarity=0.367  Sum_probs=115.5

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|.++|.|+.| ++++++.|...+...-|++||+|+..|.|..++|+|.+|.|.+....   |+  ++..+..||.||-
T Consensus         7 ~Fl~~~pPF~~L-~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~---g~--v~~~~~~gdlFg~   80 (610)
T COG2905           7 QFLQQHPPFSQL-PAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDG---GE--VLDRLAAGDLFGF   80 (610)
T ss_pred             HHHhcCCCcccC-CHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCC---Ce--eeeeeccCccccc
Confidence            368999999999 99999999999999999999999999999999999999999997432   33  7999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhh-hhhhh
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR-LNEEF  143 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~-~~~~~  143 (362)
                      .+++...+.+..+.|.  +|+.|+.||++.|.++..++|.+++-+..+.+++.. +.+.+
T Consensus        81 ~~l~~~~~~~~~~~ae--edsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR~~~~~~~~  138 (610)
T COG2905          81 SSLFTELNKQRYMAAE--EDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKRLRDIADRL  138 (610)
T ss_pred             hhhcccCCCcceeEee--ccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998888888888  679999999999999999999999877766665544 44433

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.45  E-value=5.7e-14  Score=144.85  Aligned_cols=92  Identities=17%  Similarity=0.244  Sum_probs=72.6

Q ss_pred             hhcCC-cceeeeeeeee-------ccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeec
Q psy14740        261 GEANC-DFIVKLYKTFK-------DKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRD  331 (362)
Q Consensus       261 ~~l~h-~~i~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrD  331 (362)
                      +.+.| +||.++++++.       ....++.+||++ +++|.+++... ..+++..+..++.||+.||.|||++||+|||
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            34556 68888888772       234578888987 77999999753 4599999999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecccc
Q psy14740        332 LKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       332 ikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      |||+|||++..+.+|++|||++
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~  127 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASC  127 (793)
T ss_pred             CCchhEEEcccCcEEEeecccc
Confidence            9999999965544444444443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.45  E-value=1.2e-12  Score=110.67  Aligned_cols=102  Identities=15%  Similarity=0.080  Sum_probs=77.2

Q ss_pred             hHHHHHHHhhcCC--cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCcEe
Q psy14740        253 IMSEKEIMGEANC--DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL-HSRNIIY  329 (362)
Q Consensus       253 ~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~l-H~~~iiH  329 (362)
                      ..+|...|+++..  -++++++.+    ..-++||||+.+..+..-.-+...+++.....+..+++.++..+ |+.|++|
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVH  148 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVH  148 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            3478888888742  456666654    35789999996654432211223466667778889999999988 8999999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +||+|.|||+. ++.++|+|||.|.....|
T Consensus       149 GDLs~~NIL~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         149 ADLSEYNMLWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             CCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence            99999999996 578999999999877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1024|consensus

Probab=99.45  E-value=1.7e-13  Score=122.92  Aligned_cols=155  Identities=18%  Similarity=0.234  Sum_probs=124.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCC----CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDP----SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      .++++...+.+|+||+||.+.+...+    .+.+.+|.++.                                       
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~---------------------------------------  324 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ---------------------------------------  324 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh---------------------------------------
Confidence            34667778999999999999765321    23344444432                                       


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeee-eccceEEEEEeccCCcchHHHHHhc---
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDK---  300 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~---  300 (362)
                                         ..++.....+++|.-.+..+.|||+..+.++. ++....+.++.+...|+|..++.-.   
T Consensus       325 -------------------~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~  385 (563)
T KOG1024|consen  325 -------------------HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGD  385 (563)
T ss_pred             -------------------cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccC
Confidence                               22334455678899899999999999998875 4556788999999889999998721   


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCCC
Q psy14740        301 -----GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       301 -----~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~~  361 (362)
                           ..++..+...++.|+..|++|||++|+||.||-..|.+|++.-++||+|-.++|.+-+.+|
T Consensus       386 ~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY  451 (563)
T KOG1024|consen  386 DPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY  451 (563)
T ss_pred             CCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccc
Confidence                 2367788899999999999999999999999999999999999999999999999877776

>KOG0603|consensus

Probab=99.42  E-value=2.1e-14  Score=136.20  Aligned_cols=145  Identities=37%  Similarity=0.600  Sum_probs=122.9

Q ss_pred             ecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        157 LGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       157 lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      +|+|.||.|+++...+  +.+.-+++|++.+......                                           
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~-------------------------------------------   38 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR-------------------------------------------   38 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccc-------------------------------------------
Confidence            6899999999987533  4567789998877522110                                           


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                    ...+-..|..++..++ ||.+++++..++.+...++++++..|++|..-+.+...+++.....+..
T Consensus        39 --------------~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~a  104 (612)
T KOG0603|consen   39 --------------DRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLA  104 (612)
T ss_pred             --------------cccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHH
Confidence                          0113455777888886 9999999999999999999999999999999888777789999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.+++++|+.+|+|||+|++||+++.+|.+++.|||+++....
T Consensus       105 elaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~  149 (612)
T KOG0603|consen  105 ELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK  149 (612)
T ss_pred             HHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh
Confidence            999999999999999999999999999999999999999987643

>KOG0499|consensus

Probab=99.42  E-value=8.4e-13  Score=123.30  Aligned_cols=116  Identities=27%  Similarity=0.444  Sum_probs=104.8

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|.++.||++. +..-+..++-.++...|-+|+.|.+.||.|..||||..|.|+|.--.   ..+.++.+|..|++|||+
T Consensus       528 ~lSKVqLFq~C-dr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp---~~~~Vl~tL~~GsVFGEI  603 (815)
T KOG0499|consen  528 ILSKVQLFQGC-DRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGP---DGTKVLVTLKAGSVFGEI  603 (815)
T ss_pred             hhhHHHHhhhh-HHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecCC---CCCEEEEEecccceeeee
Confidence            57889999999 99999999999999999999999999999999999999999997322   335889999999999999


Q ss_pred             ccc---CCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHH
Q psy14740         86 ALQ---GDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  127 (362)
Q Consensus        86 ~l~---~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~  127 (362)
                      +|+   ++..|+|+|+|.  .-|.+++++++++..++..+|+-..
T Consensus       604 SLLaigG~nRRTAnV~a~--Gf~nLfvL~KkdLneil~~YP~sq~  646 (815)
T KOG0499|consen  604 SLLAIGGGNRRTANVVAH--GFANLFVLDKKDLNEILVHYPDSQR  646 (815)
T ss_pred             eeeeecCCCccchhhhhc--ccceeeEecHhHHHHHHHhCccHHH
Confidence            988   457899999999  5599999999999999999998654

>KOG4158|consensus

Probab=99.38  E-value=9.8e-13  Score=118.50  Aligned_cols=90  Identities=31%  Similarity=0.425  Sum_probs=76.5

Q ss_pred             cCCcceeeeeeeeec---------------------------cceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHH
Q psy14740        263 ANCDFIVKLYKTFKD---------------------------KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV  315 (362)
Q Consensus       263 l~h~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql  315 (362)
                      .+||||+++...|.+                           +..+|+||..+ ..+|.+++..+ ..+......++.|+
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~-~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR-HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC-CCchHHHHHHHHHH
Confidence            379999999998743                           23689999998 78999999764 57778888899999


Q ss_pred             HHHHHHHHHCCcEeecCCCCcEEec--CCC--cEEEEecccce
Q psy14740        316 VEAFDYLHSRNIIYRDLKPENLLLS--TSG--YVKLVDFGFAK  354 (362)
Q Consensus       316 ~~al~~lH~~~iiHrDikp~NIl~~--~~~--~~kl~DFG~a~  354 (362)
                      ++|+.|||.+||.|||+|.+|||+.  +++  .++++|||+|-
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            9999999999999999999999995  333  47899999873

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.37  E-value=3e-12  Score=106.80  Aligned_cols=128  Identities=23%  Similarity=0.215  Sum_probs=93.4

Q ss_pred             EEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        154 ITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       154 ~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      ++.++.|.++.||.+...   ++.+++|......                                              
T Consensus         3 ~~~l~~G~~~~vy~~~~~---~~~~~lK~~~~~~----------------------------------------------   33 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA---NKKYVVRIPGNGT----------------------------------------------   33 (170)
T ss_pred             eeecCCcccCceEEEEEC---CeEEEEEeCCCCc----------------------------------------------
Confidence            466889999999999843   5679999864431                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcc-eeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF-IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                                    ........|+.+++.+.+.+ +++++....  ...++|||+++|.++.+.     ..   .....+
T Consensus        34 --------------~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~-----~~---~~~~~~   89 (170)
T cd05151          34 --------------ELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLTE-----DF---SDPENL   89 (170)
T ss_pred             --------------ccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccccc-----cc---cCHHHH
Confidence                          01123567888888875433 455555543  235799999999887643     11   123456


Q ss_pred             HHHHHHHHHHHHCCc-----EeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        313 ACVVEAFDYLHSRNI-----IYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       313 ~ql~~al~~lH~~~i-----iHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .+++.+|..||..++     +|+|++|.||+++ ++.++++|||.+..
T Consensus        90 ~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          90 EKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            789999999999985     9999999999998 67899999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=4.8e-11  Score=97.84  Aligned_cols=99  Identities=21%  Similarity=0.200  Sum_probs=77.0

Q ss_pred             hhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Q psy14740        249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII  328 (362)
Q Consensus       249 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~ii  328 (362)
                      ...+-.+|+.++..+.--.|+...=+..+++...|+|||++|..|.+.+...   .    ..++..+-.-+.-||..||+
T Consensus        42 rr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~giv  114 (204)
T COG3642          42 RRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIV  114 (204)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCee
Confidence            3456788999999886545554444555677788999999998888888764   2    33455555667889999999


Q ss_pred             eecCCCCcEEecCCCcEEEEeccccee
Q psy14740        329 YRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       329 HrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      |+||.++||++...+ +.++|||++..
T Consensus       115 HGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         115 HGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             cCCCccceEEEeCCc-EEEEECCcccc
Confidence            999999999997654 99999999974

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.19  E-value=2.6e-10  Score=101.70  Aligned_cols=76  Identities=28%  Similarity=0.362  Sum_probs=52.5

Q ss_pred             EEEEEeccCCcchHHHHHh---cCCC----CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        281 LYMLMESCLGGELWTILRD---KGNF----DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       281 ~~lv~e~~~~~~L~~~l~~---~~~l----~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      .+++|+-+ .++|.+++.-   ....    ....-..+..|++..+++||+.|++|+||||+|++++.+|.+.|+||+..
T Consensus       114 ~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~  192 (288)
T PF14531_consen  114 RFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSL  192 (288)
T ss_dssp             EEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGE
T ss_pred             hhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHH
Confidence            47788877 7888887642   2212    12222445589999999999999999999999999999999999999987


Q ss_pred             eecC
Q psy14740        354 KKLI  357 (362)
Q Consensus       354 ~~~~  357 (362)
                      ...+
T Consensus       193 ~r~g  196 (288)
T PF14531_consen  193 VRAG  196 (288)
T ss_dssp             EETT
T ss_pred             eecC
Confidence            6543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.16  E-value=2.9e-10  Score=95.78  Aligned_cols=103  Identities=20%  Similarity=0.169  Sum_probs=70.6

Q ss_pred             hhhhHHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccC--CcchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHH
Q psy14740        250 QQHIMSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCL--GGELWTILRDKGNFDDATTRFYTACVVEAFDY-LHS  324 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~-lH~  324 (362)
                      .....+|.+.|..+..-  ++++++.+.    .-.+||||++  |..+..+....  ++......++.+++..+.. +|.
T Consensus        52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~  125 (188)
T PF01163_consen   52 REWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHK  125 (188)
T ss_dssp             HHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHh
Confidence            45577899999998654  577777553    2479999998  66665544321  2245556677777775555 589


Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .||+|+|+.+.||+++.+ .+.++|||.|.....|
T Consensus       126 ~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~p  159 (188)
T PF01163_consen  126 AGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSHP  159 (188)
T ss_dssp             TTEEESS-STTSEEEETT-CEEE--GTTEEETTST
T ss_pred             cCceecCCChhhEEeecc-eEEEEecCcceecCCc
Confidence            999999999999999877 9999999999877654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087|consensus

Probab=99.14  E-value=7.7e-10  Score=90.49  Aligned_cols=109  Identities=21%  Similarity=0.210  Sum_probs=80.0

Q ss_pred             hhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCC-cchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Q psy14740        248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKG--NFDDATTRFYTACVVEAFDYLHS  324 (362)
Q Consensus       248 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~--~l~~~~~~~~~~ql~~al~~lH~  324 (362)
                      -...+..+|+.++.++.--.|...--++.+...-.|.|||++| .++.+++...-  .........++.++-+.+.-||.
T Consensus        52 Ltr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~  131 (229)
T KOG3087|consen   52 LTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD  131 (229)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh
Confidence            3456678999999987543444433345455556788999976 47777776532  23333446788889899999999


Q ss_pred             CCcEeecCCCCcEEecCCC---cEEEEecccceec
Q psy14740        325 RNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL  356 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~  356 (362)
                      .+|+|+||..+||++.+++   .+.++|||++..-
T Consensus       132 ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  132 NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             CCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            9999999999999997654   3589999998643

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.13  E-value=5.4e-10  Score=97.24  Aligned_cols=140  Identities=17%  Similarity=0.240  Sum_probs=100.5

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      +.++.|..+.+|++...+  ++.+++|........                                             
T Consensus         4 ~~l~~G~~n~~~~v~~~~--g~~~ilK~~~~~~~~---------------------------------------------   36 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG--GRRLVLRRPPPGALL---------------------------------------------   36 (223)
T ss_pred             eecCCCccceEEEEEecC--CcceEEEeCCCcccC---------------------------------------------
Confidence            568999999999998542  567999987543110                                             


Q ss_pred             hhhhccccccccchhhhhhHHHHHHHhhcCC--cceeeeeeeeecc---ceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        235 TSERRRAPQIVETRQQQHIMSEKEIMGEANC--DFIVKLYKTFKDK---KYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   .....+..|..+++.+.+  .++++++.+....   +..+++||+++|.++.+.+.. ..+++....
T Consensus        37 -------------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~  102 (223)
T cd05154          37 -------------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEERR  102 (223)
T ss_pred             -------------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHHH
Confidence                         122456789999998865  3467777776554   367899999999888765421 235555666


Q ss_pred             HHHHHHHHHHHHHHH--------------------------------------------------------CCcEeecCC
Q psy14740        310 FYTACVVEAFDYLHS--------------------------------------------------------RNIIYRDLK  333 (362)
Q Consensus       310 ~~~~ql~~al~~lH~--------------------------------------------------------~~iiHrDik  333 (362)
                      .++.+++.+|..||+                                                        ..++|+|++
T Consensus       103 ~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~  182 (223)
T cd05154         103 ALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYR  182 (223)
T ss_pred             HHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCC
Confidence            666666666666662                                                        346999999


Q ss_pred             CCcEEecC--CCcEEEEeccccee
Q psy14740        334 PENLLLST--SGYVKLVDFGFAKK  355 (362)
Q Consensus       334 p~NIl~~~--~~~~kl~DFG~a~~  355 (362)
                      |.||+++.  ++.+.|+||+.+..
T Consensus       183 ~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         183 LGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cccEEEcCCCCcEEEEEecccccc
Confidence            99999998  56789999998863

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1240|consensus

Probab=99.11  E-value=1.4e-11  Score=123.46  Aligned_cols=146  Identities=16%  Similarity=0.225  Sum_probs=117.8

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      ++...+.||++.|=.|.++++..  | .+.+|++-+.+                                          
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e--G-~vVvKVFvk~~------------------------------------------   58 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE--G-LVVVKVFVKQD------------------------------------------   58 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC--c-eEEEEEEeccC------------------------------------------
Confidence            78889999999999999987543  4 49999986652                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                   ...+.+...+...|+. ...+++||.+.+-.+.......|+|=+|. ..+|++.+..+.-+...+.+
T Consensus        59 -------------p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyv-khnLyDRlSTRPFL~~iEKk  123 (1431)
T KOG1240|consen   59 -------------PTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYV-KHNLYDRLSTRPFLVLIEKK  123 (1431)
T ss_pred             -------------CCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHH-hhhhhhhhccchHHHHHHHH
Confidence                         1122223333444555 55679999999998888888889998998 78999999876667888899


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .|+.|++.||.-+|..||.|+|||.+|||+..=+=+.|+||..-+.
T Consensus       124 WiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen  124 WIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKP  169 (1431)
T ss_pred             HHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCC
Confidence            9999999999999999999999999999998877789999986553

>KOG0590|consensus

Probab=99.05  E-value=1.6e-11  Score=121.32  Aligned_cols=154  Identities=23%  Similarity=0.385  Sum_probs=125.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|.+.+.+|+|+|+.+-.....+++...++.|.+....                                        
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~----------------------------------------   58 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP----------------------------------------   58 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC----------------------------------------
Confidence            4567888889999999999998777766667777654431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHH-HhcC-CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKG-NFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l-~~~~-~l~  304 (362)
                                       .+.....+...|..+-+.+. |+|++++++...+.+..++.+++..|+++...+ .... ..+
T Consensus        59 -----------------~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~  121 (601)
T KOG0590|consen   59 -----------------KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTS  121 (601)
T ss_pred             -----------------CccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCC
Confidence                             11122233444666666665 999999999999999999999999999999988 5444 678


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HCCcEeecCCCCcEEecCCC-cEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLH-SRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH-~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~  358 (362)
                      ...+..++.|+..++.|+| ..++.||||||+|.+++..+ .+++.|||+|..+..
T Consensus       122 ~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  122 SSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             CcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            8889999999999999999 99999999999999999999 999999999987644

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.95  E-value=4.9e-09  Score=93.59  Aligned_cols=104  Identities=14%  Similarity=0.021  Sum_probs=77.7

Q ss_pred             hhHHHHHHHhhcCCcceee--eeeeeec-----cceEEEEEeccCCc-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Q psy14740        252 HIMSEKEIMGEANCDFIVK--LYKTFKD-----KKYLYMLMESCLGG-ELWTILRD--KGNFDDATTRFYTACVVEAFDY  321 (362)
Q Consensus       252 ~~~~E~~~l~~l~h~~i~~--~~~~~~~-----~~~~~lv~e~~~~~-~L~~~l~~--~~~l~~~~~~~~~~ql~~al~~  321 (362)
                      ...+|...+..+..-+|+.  +..++..     ...-++|||++++. +|.+++..  ..+.+......++.++...+.-
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            3667777777663222222  2223321     23578999999876 89888864  2345667788899999999999


Q ss_pred             HHHCCcEeecCCCCcEEecC-------CCcEEEEeccccee
Q psy14740        322 LHSRNIIYRDLKPENLLLST-------SGYVKLVDFGFAKK  355 (362)
Q Consensus       322 lH~~~iiHrDikp~NIl~~~-------~~~~kl~DFG~a~~  355 (362)
                      ||..||+|+|++|.|||++.       +..+.|+||+.++.
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            99999999999999999975       46799999998854

>KOG0606|consensus

Probab=98.93  E-value=7.9e-10  Score=110.89  Aligned_cols=172  Identities=32%  Similarity=0.507  Sum_probs=111.2

Q ss_pred             CCeeecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhh-hhHHhhhhhhhhhccccCcEEEEEe
Q psy14740         79 GDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE-TSERRRLNEEFRSLRLSDLRVITTL  157 (362)
Q Consensus        79 G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l  157 (362)
                      -.+|=|+.|....+++-.-       ..++....+.|..++....-..++-+.. ..+-....  ..--.-++|..|+.+
T Consensus        21 s~yf~e~~l~~~~~~~~~p-------arllecepeefy~lle~aeg~~~~p~~~~s~~~~~as--~~~p~e~df~~Ikli   91 (1205)
T KOG0606|consen   21 SQYFYEMSLQEAHEKSPSP-------ARLLECEPEEFYHLLEAAEGHARKPMTDESPESRGAS--RRAPSESDFNTIKLI   91 (1205)
T ss_pred             cchhhhhhhhhhhhccCCc-------hhhccCCHHHHHHHHHhhhccccCCCCCCCccccccc--ccCCCccccceeEee
Confidence            5678888877665554431       2333334788888876644443321111 11000000  111246789999999


Q ss_pred             cccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccchhhh
Q psy14740        158 GVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  237 (362)
Q Consensus       158 g~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~~~~  237 (362)
                      -.|+||.||.+.+. .+.+.+|+|+ ++....                                                
T Consensus        92 sngAygavylvrh~-~trqrfa~ki-Nkq~li------------------------------------------------  121 (1205)
T KOG0606|consen   92 SNGAYGAVYLVRHK-ETRQRFAMKI-NKQNLI------------------------------------------------  121 (1205)
T ss_pred             ccCCCCceeeeecc-ccccchhhcc-cccchh------------------------------------------------
Confidence            99999999999854 5677888854 332110                                                


Q ss_pred             hccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHH
Q psy14740        238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE  317 (362)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~  317 (362)
                                      .+  +++.....|.++                     |+....++.-++++...        +.
T Consensus       122 ----------------lR--nilt~a~npfvv---------------------gDc~tllk~~g~lPvdm--------vl  154 (1205)
T KOG0606|consen  122 ----------------LR--NILTFAGNPFVV---------------------GDCATLLKNIGPLPVDM--------VL  154 (1205)
T ss_pred             ----------------hh--ccccccCCccee---------------------chhhhhcccCCCCcchh--------hH
Confidence                            00  022233344443                     66677777666666544        67


Q ss_pred             HHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        318 AFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       318 al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++|+|+.||+|||+||+|.+|..-|++|++|||+++..
T Consensus       155 a~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  155 AVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             HhHhhccCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence            999999999999999999999999999999999998753

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.91  E-value=1.5e-08  Score=88.28  Aligned_cols=159  Identities=19%  Similarity=0.180  Sum_probs=107.1

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      .+...||-|.=|.||.+...  .+.++++|.-+-+                           +.+|.+.-..-..+..+ 
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~--~g~~~~vKfHR~G---------------------------rtsFrkvk~~R~y~~~~-  143 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP--KGRKVAVKFHRLG---------------------------RTSFRKVKRNRDYLADK-  143 (304)
T ss_pred             hhccccccCccceEEEEECC--CCCEEEEEEeecC---------------------------chhhhhhcchhhhhccc-
Confidence            34567899999999999854  4788999975443                           23333322111111100 


Q ss_pred             cchhhhhccccccccc--hhhhhhHHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        232 VDETSERRRAPQIVET--RQQQHIMSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                 ...++  -......+|.++|.++...  .+++.+++    +...+|||+++|..|...-     ++.+.
T Consensus       144 -----------~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en  203 (304)
T COG0478         144 -----------EHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVEN  203 (304)
T ss_pred             -----------cCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc-----CcccC
Confidence                       11111  1233467899999998655  67777665    4578999999887776532     23444


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      ...++..|+.-+.-+-..||+|+|+++=||+++.+|.++++||--+.....|+
T Consensus       204 ~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~  256 (304)
T COG0478         204 PDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPD  256 (304)
T ss_pred             HHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCcccccCCCCC
Confidence            55556666666666669999999999999999999999999998877665543

>KOG2968|consensus

Probab=98.91  E-value=9.3e-10  Score=107.73  Aligned_cols=112  Identities=15%  Similarity=0.324  Sum_probs=98.0

Q ss_pred             HHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecC
Q psy14740         22 ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAAD  101 (362)
Q Consensus        22 ~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~  101 (362)
                      +..+=-++.+..+.+|+.+++|||++|++|+|++|+++-...... ++..++..++.||.+|++.++.+.||..|+.|+ 
T Consensus       501 lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~-~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~Av-  578 (1158)
T KOG2968|consen  501 LRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSG-GKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAV-  578 (1158)
T ss_pred             HhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccC-ccchhhhhccCcceeehhHHhhcCCccceEEEE-
Confidence            445555668999999999999999999999999999987655444 454589999999999999999999999999999 


Q ss_pred             CCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740        102 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus       102 ~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                       .++++..||..-|..+..++|++..++.+.+..+
T Consensus       579 -RdSelariPe~l~~~ik~ryP~v~~rl~~ll~~~  612 (1158)
T KOG2968|consen  579 -RDSELARIPEGLLNFIKLRYPQVVTRLIKLLAEK  612 (1158)
T ss_pred             -eehhhhhccHHHHHHHHHhccHHHHHHHHHHHHH
Confidence             7799999999999999999999998877766543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.88  E-value=1.2e-08  Score=88.06  Aligned_cols=108  Identities=17%  Similarity=0.173  Sum_probs=82.6

Q ss_pred             hhhhHHHHHHHhhcCCcc--eeeeeeeeecc----ceEEEEEeccCCc-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDF--IVKLYKTFKDK----KYLYMLMESCLGG-ELWTILRDKGNFDDATTRFYTACVVEAFDYL  322 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~--i~~~~~~~~~~----~~~~lv~e~~~~~-~L~~~l~~~~~l~~~~~~~~~~ql~~al~~l  322 (362)
                      ..+..+|...+..+..-.  .++...+....    ...++++|++++. +|.+++......+......++.++...+.-|
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence            345677777766653222  33334443321    3468999999874 8999988754577788889999999999999


Q ss_pred             HHCCcEeecCCCCcEEecCCC---cEEEEecccceecC
Q psy14740        323 HSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLI  357 (362)
Q Consensus       323 H~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~~  357 (362)
                      |.+||+|+|++|.|||++.++   .+.++||+-++...
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            999999999999999999887   89999999887644

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601|consensus

Probab=98.81  E-value=3.9e-09  Score=100.48  Aligned_cols=107  Identities=24%  Similarity=0.326  Sum_probs=93.9

Q ss_pred             HHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHCCc
Q psy14740        254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVE----AFDYLHSRNI  327 (362)
Q Consensus       254 ~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~ql~~----al~~lH~~~i  327 (362)
                      .+|..-.+++ .|+|.++.+..|...+..|+-+|++ +.+|.++...... ++...++....+...    ||.++|+.++
T Consensus       165 ~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~  243 (524)
T KOG0601|consen  165 LREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNI  243 (524)
T ss_pred             cchhhcccccCccccccccCcccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcc
Confidence            4455555566 5899999999999999999999999 7888888876544 889999999999999    9999999999


Q ss_pred             EeecCCCCcEEecCC-CcEEEEecccceecCCCCC
Q psy14740        328 IYRDLKPENLLLSTS-GYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       328 iHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~~~~  361 (362)
                      +|-|+||.||+...+ ..++++|||+...+.++.+
T Consensus       244 ~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~  278 (524)
T KOG0601|consen  244 VHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNF  278 (524)
T ss_pred             cccccchhheecccccceeecCCcceeEEccCCcc
Confidence            999999999999999 7899999999999887764

>KOG0601|consensus

Probab=98.79  E-value=5e-09  Score=99.76  Aligned_cols=153  Identities=21%  Similarity=0.264  Sum_probs=119.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ....+|..+..+|.|.|+.++.+......+..|++|.+.++-.-                                    
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~------------------------------------  305 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT------------------------------------  305 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc------------------------------------
Confidence            34577889999999999999988755456677888877654110                                    


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                           ......-..|+-+...+ .|.+++..+..|...+..|+-.|||+++++...+.....++
T Consensus       306 ---------------------~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d  364 (524)
T KOG0601|consen  306 ---------------------FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLD  364 (524)
T ss_pred             ---------------------hHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcC
Confidence                                 00111123455555554 58899999998888888899999999998877664444588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEeccccee
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKK  355 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~  355 (362)
                      +...+....|++.++.++|+..++|+|+||+||++..+ +..++.|||++..
T Consensus       365 ~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  365 EDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             cchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence            88899999999999999999999999999999999886 7789999998864

>KOG1243|consensus

Probab=98.71  E-value=8e-08  Score=92.84  Aligned_cols=100  Identities=16%  Similarity=0.236  Sum_probs=87.1

Q ss_pred             hhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEee
Q psy14740        252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH-SRNIIYR  330 (362)
Q Consensus       252 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH-~~~iiHr  330 (362)
                      ...+-+.-|+.++||||+++++.++..+..|+|+|.+  ..|..++++   +....+..-+.||+.||.||| +++++|+
T Consensus        55 ~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHg  129 (690)
T KOG1243|consen   55 LAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHG  129 (690)
T ss_pred             HHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeec
Confidence            3556677788999999999999999999999999987  456677765   347778889999999999997 7889999


Q ss_pred             cCCCCcEEecCCCcEEEEecccceec
Q psy14740        331 DLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       331 Dikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +|.-+.++++..|..||++|-.+...
T Consensus       130 Nv~~~SVfVn~~GeWkLggle~v~~~  155 (690)
T KOG1243|consen  130 NVCKDSVFVNESGEWKLGGLELVSKA  155 (690)
T ss_pred             cEeeeeEEEcCCCcEEEeeeEEEecc
Confidence            99999999999999999999887654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.70  E-value=1.2e-07  Score=91.79  Aligned_cols=173  Identities=15%  Similarity=0.124  Sum_probs=103.1

Q ss_pred             EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccch
Q psy14740        155 TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  234 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~~  234 (362)
                      +.++.++-|.||.+....  |+.||||+..++-                          ++.++.-+..++.+.+-....
T Consensus       131 ~PiAsASIaQVH~A~L~s--G~~VAVKVqrPgi--------------------------~~~i~~DL~il~~~a~~~~~~  182 (517)
T COG0661         131 EPIASASIAQVHRAVLKS--GEEVAVKVQRPGI--------------------------RERIEADLKLLRRLARLIKRL  182 (517)
T ss_pred             CchhhhhHhhheeEEecC--CCEEEEEecCCCh--------------------------HHHHHHHHHHHHHHHHHHHHc
Confidence            568999999999999664  8899999988751                          111222222222111111110


Q ss_pred             hhh-hcccccccc------chhhhhhHHHHHHHhhc-----CCcceeeeeeeeeccceEEEEEeccCCcchHHHH--Hhc
Q psy14740        235 TSE-RRRAPQIVE------TRQQQHIMSEKEIMGEA-----NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL--RDK  300 (362)
Q Consensus       235 ~~~-~~~~~~~~~------~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~  300 (362)
                      ... ++..+...-      -...-.+.+|+..+.++     +.|++.-..=+++....-.++|||++|..+.+..  +. 
T Consensus       183 ~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-  261 (517)
T COG0661         183 PPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-  261 (517)
T ss_pred             CCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-
Confidence            010 111111111      11233456677666654     3454433333444456678999999999998874  33 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ...+...+.....++  -+..+-..|+.|.|.+|.||+++.+|.+.+.|||+...+.+
T Consensus       262 ~g~d~k~ia~~~~~~--f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         262 AGIDRKELAELLVRA--FLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cCCCHHHHHHHHHHH--HHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            335533333222222  13334458999999999999999999999999999987754

>KOG1023|consensus

Probab=98.68  E-value=3.5e-08  Score=93.90  Aligned_cols=97  Identities=25%  Similarity=0.340  Sum_probs=88.3

Q ss_pred             HhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-EeecCCCCcE
Q psy14740        260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI-IYRDLKPENL  337 (362)
Q Consensus       260 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~al~~lH~~~i-iHrDikp~NI  337 (362)
                      |+.+.|.|+.++++...++...++|.+||..|+|.+.+.. .-.++......+++.++.||.|+|.-.| .|+.+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            4568999999999999999999999999999999999986 3458888888999999999999998766 9999999999


Q ss_pred             EecCCCcEEEEecccceec
Q psy14740        338 LLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       338 l~~~~~~~kl~DFG~a~~~  356 (362)
                      +++....+||+|||+....
T Consensus        81 lvd~~w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLL   99 (484)
T ss_pred             eeeeeEEEEechhhhcccc
Confidence            9999999999999998765

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.64  E-value=8.1e-08  Score=80.37  Aligned_cols=59  Identities=24%  Similarity=0.227  Sum_probs=53.4

Q ss_pred             cchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        291 GELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       291 ~~L~~~l~~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |+|.+++... .++++..++.++.|++.||.|||+++      ||+||+++.++.+++  ||+++...
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~   60 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKT   60 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeec
Confidence            6899999864 46999999999999999999999999      999999999999999  99998653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.63  E-value=5.9e-07  Score=76.73  Aligned_cols=72  Identities=28%  Similarity=0.360  Sum_probs=55.2

Q ss_pred             eeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       275 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      +......+++|||++|..|.++..    +++.    +...+..++.-+|+.|+.|+|.+|.|+++..+ .++++||+..+
T Consensus       112 ~~~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  112 FRYTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             ccceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECcccc
Confidence            334456779999999988876532    3332    33456677899999999999999999999855 59999998776


Q ss_pred             e
Q psy14740        355 K  355 (362)
Q Consensus       355 ~  355 (362)
                      .
T Consensus       183 ~  183 (229)
T PF06176_consen  183 M  183 (229)
T ss_pred             c
Confidence            4

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0501|consensus

Probab=98.57  E-value=7.3e-08  Score=90.66  Aligned_cols=117  Identities=15%  Similarity=0.282  Sum_probs=98.9

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      -..++|-|+-- ++-=++.|+-........||+.|++.|+..|.+++|++|.++|...      ..++++|++||+||..
T Consensus       549 VFnEHpaFRLA-SDGCLRaLAm~f~~~H~APGDLlYHtGESvDaLcFvVsGSLEVIQD------DEVVAILGKGDVFGD~  621 (971)
T KOG0501|consen  549 VFNEHPAFRLA-SDGCLRALAMEFQTNHCAPGDLLYHTGESVDALCFVVSGSLEVIQD------DEVVAILGKGDVFGDE  621 (971)
T ss_pred             hhccCcceeec-cchhHHHHHHHHHhccCCCcceeeecCCccceEEEEEecceEEeec------CcEEEEeecCccchhH
Confidence            34678899888 8889999999999999999999999999999999999999999843      3579999999999986


Q ss_pred             cccCC--CcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhh
Q psy14740         86 ALQGD--DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  131 (362)
Q Consensus        86 ~l~~~--~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~  131 (362)
                      ---.+  ....|+|+|+  +-|-+..|.++.+...+.-+..++..+.+
T Consensus       622 FWK~~t~~qs~ANVRAL--TYcDLH~IKrd~Ll~VLdFYtAFanSFaR  667 (971)
T KOG0501|consen  622 FWKENTLGQSAANVRAL--TYCDLHMIKRDKLLKVLDFYTAFANSFAR  667 (971)
T ss_pred             Hhhhhhhhhhhhhhhhh--hhhhhhHHhHHHHHHHHHHHHHHHHHhhh
Confidence            43333  3457899999  55999999999999999888877654433

>KOG0195|consensus

Probab=98.50  E-value=6.6e-08  Score=83.57  Aligned_cols=103  Identities=14%  Similarity=0.201  Sum_probs=85.3

Q ss_pred             hhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCC-
Q psy14740        250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRN-  326 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~ql~~al~~lH~~~-  326 (362)
                      -+.|..|.-.|+-..||||..+.+.+..+..+.++..|++.|+|+..+.....  .+..++..++..++.|+.|||+.. 
T Consensus       231 srdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep  310 (448)
T KOG0195|consen  231 SRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEP  310 (448)
T ss_pred             cchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcch
Confidence            34577777788888999999999999999999999999999999999987654  678899999999999999999874 


Q ss_pred             -cEeecCCCCcEEecCCCcE--EEEeccc
Q psy14740        327 -IIYRDLKPENLLLSTSGYV--KLVDFGF  352 (362)
Q Consensus       327 -iiHrDikp~NIl~~~~~~~--kl~DFG~  352 (362)
                       |..--+....++++.+-+.  ..+|--+
T Consensus       311 ~ipr~~lns~hvmidedltarismad~kf  339 (448)
T KOG0195|consen  311 MIPRFYLNSKHVMIDEDLTARISMADTKF  339 (448)
T ss_pred             hhhhhhcccceEEecchhhhheeccccee
Confidence             4445678889999987654  4455333

>KOG3741|consensus

Probab=98.48  E-value=5e-06  Score=78.48  Aligned_cols=103  Identities=14%  Similarity=0.161  Sum_probs=84.4

Q ss_pred             HHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCC-cchHHHHHh---------------cCCCCHHHHHHHHHH
Q psy14740        255 SEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLG-GELWTILRD---------------KGNFDDATTRFYTAC  314 (362)
Q Consensus       255 ~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~-~~L~~~l~~---------------~~~l~~~~~~~~~~q  314 (362)
                      .-++.++++.|+|+|++.++|..    ...+.+|++|+++ ++|.++.-.               +...++..+|.++.|
T Consensus       322 ~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~Q  401 (655)
T KOG3741|consen  322 SLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQ  401 (655)
T ss_pred             HHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHH
Confidence            45678899999999999998863    3458999999986 477775421               123678999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..||.++|+.|+..+-+.|.+||+..+.+++|..-|....+.
T Consensus       402 LtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  402 LTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence            9999999999999999999999999988888888776655443

>PRK09902 hypothetical protein; Provisional

Probab=98.42  E-value=4.4e-06  Score=71.14  Aligned_cols=107  Identities=16%  Similarity=0.148  Sum_probs=79.0

Q ss_pred             hhhhHHHHHHHhhcCCcc--eeeeeee--eecc--ceEEEEEeccCC-cchHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q psy14740        250 QQHIMSEKEIMGEANCDF--IVKLYKT--FKDK--KYLYMLMESCLG-GELWTILRDK--GNFDDATTRFYTACVVEAFD  320 (362)
Q Consensus       250 ~~~~~~E~~~l~~l~h~~--i~~~~~~--~~~~--~~~~lv~e~~~~-~~L~~~l~~~--~~l~~~~~~~~~~ql~~al~  320 (362)
                      ...+.+|...+..+..-+  ++++...  ...+  -.-+||+|-++| .+|.+++...  .+.++..-..++.++...+.
T Consensus        63 ~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia  142 (216)
T PRK09902         63 RPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFK  142 (216)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHH
Confidence            355788988888873222  4443311  1112  237899997744 5898887653  24567777889999999999


Q ss_pred             HHHHCCcEeecCCCCcEEecCCCc--EEEEecccceec
Q psy14740        321 YLHSRNIIYRDLKPENLLLSTSGY--VKLVDFGFAKKL  356 (362)
Q Consensus       321 ~lH~~~iiHrDikp~NIl~~~~~~--~kl~DFG~a~~~  356 (362)
                      -||+.|+.|+|+.+.||+++.++.  +.++||--++..
T Consensus       143 ~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        143 KMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             HHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            999999999999999999987677  999999877643

>KOG2968|consensus

Probab=98.33  E-value=2.1e-06  Score=84.87  Aligned_cols=167  Identities=17%  Similarity=0.205  Sum_probs=109.3

Q ss_pred             CCCEEEecCCCCCeEEEEeeeEEEEEEecCCC-----CcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEEEE
Q psy14740         36 EGDYIIRQGARGDTFFIISKGKVKVTMKQPNS-----TEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVI  110 (362)
Q Consensus        36 ~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~-----~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i  110 (362)
                      ...+|.++|+...++|.|..|.+.+....-+.     ..+..+...+||+++|-++++.+.|...+++|.  +|+.++.|
T Consensus       393 eitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~s~~~~~~~~~~f~v~pG~ivgyla~lt~e~S~~tirAr--sdt~v~~i  470 (1158)
T KOG2968|consen  393 EITIIVEQGARDVGLYYIIKGSLSVYQSMYDVSGNLVLAGMLLFVVGPGEIVGYLAILTNEPSFITIRAR--SDTRVLFI  470 (1158)
T ss_pred             ceEEEEecccccceeeEEeecceeeeehhcccccccccccceEEEecCCceechhhhhcCCcceEEEEEe--cceEEEEe
Confidence            34558999999999999999999876532211     234678889999999999999999999999999  77999999


Q ss_pred             ehhhHHHHhhchHH----HHHhhhhhhhHHhhh-hhhhhhccccCcEEEEEecccce---------ecEEEEEecCCCCC
Q psy14740        111 DQETFNQLISSLDE----IRTKYVDETSERRRL-NEEFRSLRLSDLRVITTLGVGGF---------GRVELVQIAGDPSR  176 (362)
Q Consensus       111 ~~~~f~~l~~~~p~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lg~G~~---------g~v~~~~~~~~~~~  176 (362)
                      ++.+|.+++..+|.    +...+...++.+... -.++.+..++.-+.+  ..+|.-         |....+... +.++
T Consensus       471 srs~l~~~~~~~p~I~L~ia~svl~~lsp~lr~~D~AldWv~l~~g~al--yrqgD~Sd~iyvVl~GRlRsv~~~-~~~k  547 (1158)
T KOG2968|consen  471 SRSDLERFLDAEPLIYLRIAHSVLRRLSPFLRKLDFALDWVRLEPGQAL--YRQGDSSDSIYVVLNGRLRSVIRQ-SGGK  547 (1158)
T ss_pred             eHHHHHHHHHhCceEEEehhhHHHHhcCHHHhhhhhhcceEEeccccHH--HhcCCccCcEEEEecCeehhhhhc-cCcc
Confidence            99999999999994    443333333322211 122222222111111  112222         222223222 2234


Q ss_pred             ceeeeeeccccccc-----cccccccceeeeCCCCc
Q psy14740        177 SFALKQMKKSQVMN-----LDDLRTANIVAADPEGV  207 (362)
Q Consensus       177 ~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v  207 (362)
                      .-.+..+.+++.+|     .+..|..|++|+....+
T Consensus       548 ~~i~~EygrGd~iG~~E~lt~~~R~tTv~AvRdSel  583 (1158)
T KOG2968|consen  548 KEIVGEYGRGDLIGEVEMLTKQPRATTVMAVRDSEL  583 (1158)
T ss_pred             chhhhhccCcceeehhHHhhcCCccceEEEEeehhh
Confidence            44566677888888     35788888888765433

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.23  E-value=2e-05  Score=68.87  Aligned_cols=102  Identities=16%  Similarity=0.140  Sum_probs=60.5

Q ss_pred             hhHHHHHHHhhcCCc--ceeeeeeeeeccceEEEEEeccCCcc-hH--------------HHHHh-----c----CCCCH
Q psy14740        252 HIMSEKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGE-LW--------------TILRD-----K----GNFDD  305 (362)
Q Consensus       252 ~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~-L~--------------~~l~~-----~----~~l~~  305 (362)
                      ...+|.++++.+..-  .+++.+.+....+...++||+++|.+ +.              ..+.+     +    ...+.
T Consensus        38 ~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l  117 (226)
T TIGR02172        38 TIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTF  117 (226)
T ss_pred             HHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcH
Confidence            357788888887432  35677777777777889999998863 11              11111     0    00110


Q ss_pred             H-HHHHHHHHH----------HH-HHHHHH----HCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        306 A-TTRFYTACV----------VE-AFDYLH----SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       306 ~-~~~~~~~ql----------~~-al~~lH----~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      . ....+..++          .. ...+|.    ...++|+|+.|.||+++.++ +.++||+.+.
T Consensus       118 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       118 QSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             HHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            0 001111111          11 112222    22478999999999999888 9999999875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.23  E-value=2.1e-05  Score=68.11  Aligned_cols=100  Identities=19%  Similarity=0.092  Sum_probs=69.2

Q ss_pred             HHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCCcch-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEe
Q psy14740        254 MSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLGGEL-WTILRDKGNFDDATTRFYTACVVEAFDYLHS-RNIIY  329 (362)
Q Consensus       254 ~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~-~~iiH  329 (362)
                      ..|...|+++.  +=.+++.+.+..    -.+||||+..... .-.++. -++....+..+..+++..+.-|-. .+++|
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVH  190 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVH  190 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCccc
Confidence            35666666652  344556565543    5799999944311 112221 123344677788888888887776 99999


Q ss_pred             ecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        330 RDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       330 rDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +||+.=|||+. ++.+.++|||-|.....|
T Consensus       191 gDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         191 GDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             ccchhhheEEE-CCeEEEEECccccccCCC
Confidence            99999999998 889999999998776554

>KOG1266|consensus

Probab=98.22  E-value=1.1e-06  Score=78.21  Aligned_cols=89  Identities=22%  Similarity=0.346  Sum_probs=76.8

Q ss_pred             HhhcCCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cE
Q psy14740        260 MGEANCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILRDK----GNFDDATTRFYTACVVEAFDYLHSRN--II  328 (362)
Q Consensus       260 l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~ql~~al~~lH~~~--ii  328 (362)
                      +-.+.|.|+++++.+|.+..     ...++.||+..|++.+++++.    ..+......+|..||++||.|||+..  |+
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            34457999999999987654     378899999999999999753    35888999999999999999999885  99


Q ss_pred             eecCCCCcEEecCCCcEEEE
Q psy14740        329 YRDLKPENLLLSTSGYVKLV  348 (362)
Q Consensus       329 HrDikp~NIl~~~~~~~kl~  348 (362)
                      |+++..+-|++..+|.+|+.
T Consensus       201 hgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             cCCcchhheeecCCceEEec
Confidence            99999999999999888864

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.20  E-value=4.5e-05  Score=66.56  Aligned_cols=31  Identities=32%  Similarity=0.521  Sum_probs=21.8

Q ss_pred             CCcEeecCCCCcEEec-CCCcEEEEeccccee
Q psy14740        325 RNIIYRDLKPENLLLS-TSGYVKLVDFGFAKK  355 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~  355 (362)
                      ..++|+|+.|.||+++ .++.+.|+||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceeeeccceeEEEecccceE
Confidence            4699999999999999 666678999998754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1033|consensus

Probab=98.17  E-value=4.2e-07  Score=85.54  Aligned_cols=77  Identities=29%  Similarity=0.415  Sum_probs=67.9

Q ss_pred             ceEEEEEeccCCcchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        279 KYLYMLMESCLGGELWTILRDKG---NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       279 ~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .++||.|++|...+|.+++....   ..+......++.|+..|++|   ++.+|||+||.||.+..+..+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            36899999999999999997543   35677888999999999999   9999999999999999999999999999876


Q ss_pred             cCC
Q psy14740        356 LIG  358 (362)
Q Consensus       356 ~~~  358 (362)
                      ...
T Consensus       406 ~~~  408 (516)
T KOG1033|consen  406 QDK  408 (516)
T ss_pred             ccc
Confidence            543

>KOG1235|consensus

Probab=98.16  E-value=1e-05  Score=78.37  Aligned_cols=85  Identities=14%  Similarity=0.200  Sum_probs=58.6

Q ss_pred             eeeeeeeeeccceEEEEEeccCCcchHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC----
Q psy14740        268 IVKLYKTFKDKKYLYMLMESCLGGELWTI--LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----  341 (362)
Q Consensus       268 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~----  341 (362)
                      |+++|..+.  ..-.++|||++|..+.++  +.+. .++...+..-+.+..  +.-+-..|.+|+|-+|.||++..    
T Consensus       266 VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~  340 (538)
T KOG1235|consen  266 VPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEG  340 (538)
T ss_pred             CCeehhhcC--cceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCC
Confidence            555555443  447899999999877654  4443 355554444443332  22334678999999999999984    


Q ss_pred             CCcEEEEecccceecC
Q psy14740        342 SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       342 ~~~~kl~DFG~a~~~~  357 (362)
                      ++.+.+.|||+.+.+.
T Consensus       341 ~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  341 DEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CccEEEEccccccccc
Confidence            6689999999998764

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.99  E-value=8.8e-05  Score=65.62  Aligned_cols=103  Identities=14%  Similarity=0.096  Sum_probs=63.1

Q ss_pred             hhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHH----------------HhcC-------CCCHH-
Q psy14740        252 HIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----------------RDKG-------NFDDA-  306 (362)
Q Consensus       252 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l----------------~~~~-------~l~~~-  306 (362)
                      ...+|+.+++.+. +--+++++.+...++..++||++++|.++....                .+-.       ++... 
T Consensus        37 ~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~  116 (244)
T cd05150          37 ELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRL  116 (244)
T ss_pred             chHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhH
Confidence            3567888887773 345777788777667789999999987776431                0000       11100 


Q ss_pred             --HHHHH---HH----------------HHHHHHHHH-------HHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        307 --TTRFY---TA----------------CVVEAFDYL-------HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       307 --~~~~~---~~----------------ql~~al~~l-------H~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                        .....   +.                .....+..|       ....++|+|+.|.|||++.++.+.|+||+.|.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         117 DRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             HHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence              00000   00                011111222       12348999999999999988778899999885

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle

Probab=97.97  E-value=0.00022  Score=56.56  Aligned_cols=105  Identities=18%  Similarity=0.278  Sum_probs=86.1

Q ss_pred             ccCCHHHHHHHHhh-cceeEecCCCEEEecC-CCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc---c--
Q psy14740         15 HLVNQGVILTIVYF-SSQTFYKEGDYIIRQG-ARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA---L--   87 (362)
Q Consensus        15 ~l~~~~~~~~l~~~-~~~~~~~~g~~i~~~g-~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~---l--   87 (362)
                      +. +..+..+|+.+ +.++.+++|+.-.-|| .+.|.+-++++|+++|+.      +...+..+.|-++..--.   +  
T Consensus        14 ~V-s~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~------~g~fLH~I~p~qFlDSPEW~s~~~   86 (153)
T PF04831_consen   14 KV-SRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSC------DGRFLHYIYPYQFLDSPEWESLRP   86 (153)
T ss_pred             CC-CHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEE------CCEeeEeecccccccChhhhcccc
Confidence            34 88999999998 6789999999999999 556999999999999984      336788888877665321   1  


Q ss_pred             cCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHh
Q psy14740         88 QGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  128 (362)
Q Consensus        88 ~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~  128 (362)
                      -.+.....|++|.  ++|+.+..+|+.+..++..+|-++.-
T Consensus        87 s~~~~FQVTitA~--~~Cryl~W~R~kL~~~l~~~~~L~~v  125 (153)
T PF04831_consen   87 SEDDKFQVTITAE--EDCRYLCWPREKLYLLLAKDPFLAAV  125 (153)
T ss_pred             CCCCeEEEEEEEc--CCcEEEEEEHHHHHHHHhhCHHHHHH
Confidence            2445678999999  66999999999999999999988753

It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane

>PLN02876 acyl-CoA dehydrogenase

Probab=97.92  E-value=0.00014  Score=75.64  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=31.4

Q ss_pred             hhhHHHHHHHhhcC-Ccce--eeeeeeeecc---ceEEEEEeccCCcc
Q psy14740        251 QHIMSEKEIMGEAN-CDFI--VKLYKTFKDK---KYLYMLMESCLGGE  292 (362)
Q Consensus       251 ~~~~~E~~~l~~l~-h~~i--~~~~~~~~~~---~~~~lv~e~~~~~~  292 (362)
                      ..+.+|..+|+.+. |+++  ++++.++.+.   +..|+|||+++|..
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            34778999999885 6655  7777776554   46899999998764

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.87  E-value=0.00033  Score=59.61  Aligned_cols=99  Identities=22%  Similarity=0.323  Sum_probs=70.4

Q ss_pred             hhhHHHHHHHhhc------CCcceeeeeeeeeccceEEEEEeccC------CcchHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy14740        251 QHIMSEKEIMGEA------NCDFIVKLYKTFKDKKYLYMLMESCL------GGELWTILRDKGNFDDATTRFYTACVVEA  318 (362)
Q Consensus       251 ~~~~~E~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~l~~~~~~~~~~ql~~a  318 (362)
                      ....+|+.-...+      .+.+|+++|++.+++...-+|+|.+.      ..+|.+++.+ +.+++ .....+   -.-
T Consensus        56 ~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~~~L---~~f  130 (199)
T PF10707_consen   56 RQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELRQAL---DEF  130 (199)
T ss_pred             HHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHHHHH---HHH
Confidence            3344555444443      48899999999999988999999864      2478888854 44665 333333   334


Q ss_pred             HHHHHHCCcEeecCCCCcEEecCC--C--cEEEEe-cccce
Q psy14740        319 FDYLHSRNIIYRDLKPENLLLSTS--G--YVKLVD-FGFAK  354 (362)
Q Consensus       319 l~~lH~~~iiHrDikp~NIl~~~~--~--~~kl~D-FG~a~  354 (362)
                      ..||-+++|+.+|++|.||++...  +  .+.|+| ||...
T Consensus       131 ~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~  171 (199)
T PF10707_consen  131 KRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKE  171 (199)
T ss_pred             HHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcc
Confidence            578889999999999999999643  2  588888 66544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.79  E-value=0.00062  Score=57.71  Aligned_cols=146  Identities=22%  Similarity=0.212  Sum_probs=87.6

Q ss_pred             cCcEEEEEecccce-ecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        149 SDLRVITTLGVGGF-GRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       149 ~~~~~~~~lg~G~~-g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+++.++.||.|.- |.|++++..   ++.||+|+...-......-.  ....+...  .               .    
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~---g~~YALKlf~~~~~~~~~~~--~~~~~~~~--~---------------~----   90 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID---GRIYALKLFRFWDYTEPDYT--RERFAGHE--T---------------S----   90 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC---CeEEEEEEeeccccCCCccc--cccccccc--c---------------c----
Confidence            68899999999999 999999965   55899999432111110000  00000000  0               0    


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcce--eeeeeeeecc------------------ceEEEE
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFI--VKLYKTFKDK------------------KYLYML  284 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i--~~~~~~~~~~------------------~~~~lv  284 (362)
                                     ..........|..|.....++   .+.+.  +++|++..-.                  ...-||
T Consensus        91 ---------------~~~~~~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIV  155 (207)
T PF13095_consen   91 ---------------LSTPAHYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIV  155 (207)
T ss_pred             ---------------cchhhhhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEE
Confidence                           000011223566676666555   44555  7777775211                  124567


Q ss_pred             EeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        285 MESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       285 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      .||.+...         .+....    +.+|.+-+..+|..||+-+|+++.|..     .-+|+|||.+
T Consensus       156 KD~v~~~~---------~~~~~~----~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  156 KDFVPDDP---------PLQIRD----IPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             EeecCCcc---------ccchhH----HHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            77765433         233333    446667788999999999999999985     3578999965

>KOG0606|consensus

Probab=97.72  E-value=5.9e-06  Score=83.81  Aligned_cols=94  Identities=28%  Similarity=0.370  Sum_probs=82.1

Q ss_pred             hcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC
Q psy14740        262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST  341 (362)
Q Consensus       262 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~  341 (362)
                      ...+|.++.....+.-....+++++|+.+++|...++.-+..+++-++.+...+..++++||...+.|+|++|.|+++..
T Consensus       860 ~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~  939 (1205)
T KOG0606|consen  860 TPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAY  939 (1205)
T ss_pred             cCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcc
Confidence            34567777776666667789999999999999999988777888888888999999999999999999999999999999


Q ss_pred             CCcEEEEeccccee
Q psy14740        342 SGYVKLVDFGFAKK  355 (362)
Q Consensus       342 ~~~~kl~DFG~a~~  355 (362)
                      ++..++.|||..+.
T Consensus       940 ~gh~~l~~~~t~~~  953 (1205)
T KOG0606|consen  940 DGHRPLTDFGTLSK  953 (1205)
T ss_pred             cCCcccCccccccc
Confidence            99999999995543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.71  E-value=0.00031  Score=57.79  Aligned_cols=132  Identities=22%  Similarity=0.173  Sum_probs=88.0

Q ss_pred             EEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      ....|++|++|.||++.+.+   ..+|+|+-+..                                              
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~---~~~a~Kvrr~d----------------------------------------------   56 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRG---GEVALKVRRRD----------------------------------------------   56 (201)
T ss_pred             hhhhhhcccccEEEEeeccC---ceEEEEEecCC----------------------------------------------
Confidence            44569999999999998763   46888865432                                              


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCCccee-eeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIV-KLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY  311 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~  311 (362)
                                     .....+..|+++|..++-.++. ++|.+..    -++.|||+.|..|.+.-...   +...+   
T Consensus        57 ---------------s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~~~~~~---~rk~l---  111 (201)
T COG2112          57 ---------------SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGKLEIGG---DRKHL---  111 (201)
T ss_pred             ---------------cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhhhhhcc---cHHHH---
Confidence                           2345688999999988755443 4444432    34559999888888765421   22222   


Q ss_pred             HHHHHHHHHHHHHCCcEeecCC-CCcEEecCCCcEEEEecccceecCCC
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLK-PENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDik-p~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                       ..++++---|-..||-|..|+ |...++-.++.+.|+||-.|+.-..|
T Consensus       112 -~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~~p  159 (201)
T COG2112         112 -LRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKKKP  159 (201)
T ss_pred             -HHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhccCC
Confidence             234444344567799998887 55555555669999999999854444

>PRK11832 putative DNA-binding transcriptional regulator; Provisional

Probab=97.67  E-value=0.00064  Score=57.56  Aligned_cols=96  Identities=7%  Similarity=0.090  Sum_probs=77.3

Q ss_pred             HHHHHhhcceeEecCCCEE-EecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEec
Q psy14740         22 ILTIVYFSSQTFYKEGDYI-IRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAA  100 (362)
Q Consensus        22 ~~~l~~~~~~~~~~~g~~i-~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~  100 (362)
                      ...|...+++..+++|..+ +......+.+|+|.+|.|.+. .. +   ...+.+...-..||=...+.+....+..+|.
T Consensus        15 ~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsir-r~-d---~ll~~t~~aP~IlGl~~~~~~~~~~~~l~ae   89 (207)
T PRK11832         15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR-RE-E---NVLIGITQAPYIMGLADGLMKNDIPYKLISE   89 (207)
T ss_pred             HHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEE-ec-C---CeEEEeccCCeEeecccccCCCCceEEEEEc
Confidence            5566667789999999997 555555578999999999994 32 2   2678888999999987777776667889998


Q ss_pred             CCCCeEEEEEehhhHHHHhhchHH
Q psy14740        101 DPEGVSCLVIDQETFNQLISSLDE  124 (362)
Q Consensus       101 ~~~~~~~~~i~~~~f~~l~~~~p~  124 (362)
                        ++|+++.|+.++|.++++++.-
T Consensus        90 --~~c~~~~i~~~~~~~iie~~~L  111 (207)
T PRK11832         90 --GNCTGYHLPAKQTITLIEQNQL  111 (207)
T ss_pred             --CccEEEEeeHHHHHHHHHHhch
Confidence              5599999999999999987653

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.66  E-value=0.0002  Score=60.57  Aligned_cols=97  Identities=18%  Similarity=0.169  Sum_probs=75.5

Q ss_pred             HHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH---CC
Q psy14740        254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTI---LRDKGNFDDATTRFYTACVVEAFDYLHS---RN  326 (362)
Q Consensus       254 ~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~---l~~~~~l~~~~~~~~~~ql~~al~~lH~---~~  326 (362)
                      ..|.-+++.+.+ ++++++++++.    -+++.|+...+++...   +..-...++.....++.+++..+.+++.   ..
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            347778888865 69999999984    3568899876655421   1111235788889999999999999987   45


Q ss_pred             cEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        327 IIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       327 iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      +.-+|++|+|+-++.++.+|++|...+-
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcc
Confidence            7779999999999999999999987653

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.60  E-value=0.00043  Score=60.85  Aligned_cols=30  Identities=30%  Similarity=0.444  Sum_probs=25.7

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .+++|+|+.|.||+++.++..-|+||+.|.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            358999999999999876656799999875

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=97.41  E-value=0.0042  Score=56.68  Aligned_cols=43  Identities=12%  Similarity=0.018  Sum_probs=31.6

Q ss_pred             hhhHHHHHHHhhcC-C--cceeeeeeeeec---cceEEEEEeccCCcch
Q psy14740        251 QHIMSEKEIMGEAN-C--DFIVKLYKTFKD---KKYLYMLMESCLGGEL  293 (362)
Q Consensus       251 ~~~~~E~~~l~~l~-h--~~i~~~~~~~~~---~~~~~lv~e~~~~~~L  293 (362)
                      ..+..|+..|+.+. +  -.++++++++..   .+..++|||+++|.++
T Consensus        52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence            34778999888873 2  367888876643   3668999999988654

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.36  E-value=0.0023  Score=56.15  Aligned_cols=30  Identities=23%  Similarity=0.396  Sum_probs=26.5

Q ss_pred             CCcEeecCCCCcEEecC-CCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLST-SGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~  354 (362)
                      .+++|+|+.|.|||++. ++.+.++||-.|.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            36999999999999997 5789999998775

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.29  E-value=0.007  Score=57.24  Aligned_cols=30  Identities=20%  Similarity=0.367  Sum_probs=25.1

Q ss_pred             HCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       324 ~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ...++|+|+.|.||++..+ .++++||-+|.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            3468999999999999766 58999998664

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.26  E-value=0.005  Score=56.48  Aligned_cols=30  Identities=37%  Similarity=0.582  Sum_probs=27.2

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .+++|+|+++.|++++.++.+.++||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            689999999999999988877899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.15  E-value=0.0063  Score=55.37  Aligned_cols=30  Identities=33%  Similarity=0.494  Sum_probs=26.8

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .+++|+|+.|.|++++.++.+.|+||+.|.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            479999999999999988777899998775

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.12  E-value=0.0028  Score=56.48  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=25.1

Q ss_pred             CcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .++|+|+.|.||+++.++ +.++||..|.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            589999999999999877 7899998875

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2268|consensus

Probab=97.04  E-value=0.0012  Score=59.66  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=64.0

Q ss_pred             hHHHHHHHhhcC-Cc-ceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEee
Q psy14740        253 IMSEKEIMGEAN-CD-FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR  330 (362)
Q Consensus       253 ~~~E~~~l~~l~-h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHr  330 (362)
                      ..+|...|+.+. |. -+++.++.    +..++|||++.|..|.+.-+-   .+...   +...++.-+--|..+|+||+
T Consensus       157 a~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v---~d~~~---ly~~lm~~Iv~la~~GlIHg  226 (465)
T KOG2268|consen  157 ATKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV---EDPPT---LYDDLMGLIVRLANHGLIHG  226 (465)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeec---CChHH---HHHHHHHHHHHHHHcCceec
Confidence            456777787773 21 24444433    457899999988888764321   22222   22333334455789999999


Q ss_pred             cCCCCcEEecCCCcEEEEecccceec
Q psy14740        331 DLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       331 Dikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      |..-=||++..++.++++||--+...
T Consensus       227 DFNEFNimv~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  227 DFNEFNIMVKDDDKIVVIDFPQMVST  252 (465)
T ss_pred             ccchheeEEecCCCEEEeechHhhcc
Confidence            99999999999999999999755433

>PRK05231 homoserine kinase; Provisional

Probab=96.91  E-value=0.016  Score=53.28  Aligned_cols=30  Identities=33%  Similarity=0.491  Sum_probs=26.1

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .+++|+|++|.||+++.+...-++||+.|.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            489999999999999866656899999875

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.89  E-value=0.01  Score=54.23  Aligned_cols=29  Identities=31%  Similarity=0.468  Sum_probs=26.2

Q ss_pred             CcEeecCCCCcEEecCC----CcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTS----GYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~----~~~kl~DFG~a~  354 (362)
                      .++|+|+.|.|||++.+    +.+.++||..|.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            58999999999999874    889999999885

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG3542|consensus

Probab=96.88  E-value=0.0027  Score=61.60  Aligned_cols=110  Identities=14%  Similarity=0.267  Sum_probs=84.0

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeE-ecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTF-YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~-~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      +.+.|-|+++ +....++|+..|-... -.+|.+|...|+.-|++|+|+.|.|+|.+.+.  +    ...+.-|+.||--
T Consensus       283 MhqlpAFAnm-tMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~PdG--k----~e~l~mGnSFG~~  355 (1283)
T KOG3542|consen  283 MHQLPAFANM-TMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKPDG--K----REELKMGNSFGAE  355 (1283)
T ss_pred             HHhchHhhcc-cHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecCCC--c----eEEeecccccCCC
Confidence            4567889999 8888899888776333 47899999999999999999999999987653  2    3356679999976


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHH
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  124 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~  124 (362)
                      .-.+..-...-+++.. .||....|...+|-+++.....
T Consensus       356 PT~dkqym~G~mRTkV-DDCqFVciaqqDycrIln~vek  393 (1283)
T KOG3542|consen  356 PTPDKQYMIGEMRTKV-DDCQFVCIAQQDYCRILNTVEK  393 (1283)
T ss_pred             CCcchhhhhhhhheec-ccceEEEeehhhHHHHHHHHHh
Confidence            6555443333444433 5799999999999998866443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	362
3shr_A	299	Crystal Structure Of Cgmp-Dependent Protein Kinase		7e-29
3shr_A	299	Crystal Structure Of Cgmp-Dependent Protein Kinase		7e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-28
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-28
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-28
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-28
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-28
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-28
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-28
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-28
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-28
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-28
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-28
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-28
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-28
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-28
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-28
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-28
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-28
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-28
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		5e-28
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-28
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		5e-28
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-28
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-28
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-28
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-28
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-28
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		6e-28
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		6e-28
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		6e-28
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		6e-28
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-28
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-28
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-28
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		6e-28
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-28
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		6e-28
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-28
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-28
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		7e-28
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-28
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-28
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-28
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		7e-28
4ae9_A	343	Structure And Function Of The Human Sperm-specific		8e-28
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-28
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		9e-28
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-27
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-27
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-27
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-27
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-27
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-26
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-25
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		5e-22
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-22
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-22
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-22
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-22
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-22
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-22
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-22
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-22
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-22
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-22
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-22
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-22
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-22
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-22
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		7e-22
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		9e-22
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		9e-22
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-22
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-21
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-21
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		6e-20
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		6e-20
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		7e-20
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-19
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-19
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-19
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-19
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-19
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-19
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-18
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-18
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-16
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-16
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-16
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-16
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-16
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-16
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-16
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-16
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-16
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-16
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		6e-16
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		8e-16
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-16
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-16
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		9e-16
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-16
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-15
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-15
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-15
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-15
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-15
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-15
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-15
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-15
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-15
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-15
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-15
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-15
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		7e-15
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-14
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-14
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-14
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		9e-14
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-13
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-13
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-13
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-13
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-13
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-13
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-13
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-13
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-13
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-13
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-13
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-13
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-13
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-13
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-13
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-13
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-13
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-13
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-13
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-13
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-13
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-13
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-13
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-13
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-13
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-13
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-13
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-13
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-13
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-13
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-13
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		4e-13
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-13
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-13
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-13
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-13
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-13
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-13
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-13
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-13
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-13
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		9e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		9e-13
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-12
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-12
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-12
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-12
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-12
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-12
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		8e-12
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		8e-12
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		8e-12
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		9e-12
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-11
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-11
2oza_A	356	Structure Of P38alpha Complex Length = 356		1e-11
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-11
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-11
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-11
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-11
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-11
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-11
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-11
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-11
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-11
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-11
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-11
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-11
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-11
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-11
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-11
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-11
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-11
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-11
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		3e-11
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		5e-11
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-11
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		5e-11
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-11
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-11
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-11
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-11
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-11
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		7e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-11
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		8e-11
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		9e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-10
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-10
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-10
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-10
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-10
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-10
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-10
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-10
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		6e-10
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-10
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		8e-10
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-09
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-09
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-09
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		1e-09
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-09
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-09
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-09
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-09
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-09
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-09
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-09
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-09
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-09
3tnp_B	416	Structure And Allostery Of The Pka Riib Tetrameric		2e-09
3tnp_B	416	Structure And Allostery Of The Pka Riib Tetrameric		9e-06
3tnq_A	416	Structure And Allostery Of The Pka Riib Tetrameric		2e-09
3tnq_A	416	Structure And Allostery Of The Pka Riib Tetrameric		1e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-09
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-09
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-09
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-09
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-09
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-09
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-09
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		4e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		4e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-09
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-09
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		6e-09
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		6e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-09
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		7e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		7e-09
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		9e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		9e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		9e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-08
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-08
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-08
2qvs_B	310	Crystal Structure Of Type Iia Holoenzyme Of Camp-De		1e-08
2qvs_B	310	Crystal Structure Of Type Iia Holoenzyme Of Camp-De		4e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-08
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-08
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-08
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-08
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-08
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-08
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-08
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-08
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-08
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-08
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-08
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-08
3soa_A	444	Full-Length Human Camkii Length = 444		2e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-08
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-08
1cx4_A	305	Crystal Structure Of A Deletion Mutant Of The Type		3e-08
1cx4_A	305	Crystal Structure Of A Deletion Mutant Of The Type		5e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-08
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-08
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-08
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-08
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-08
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-08
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-08
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-08
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		4e-08
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		5e-08
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		5e-08
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-08
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-08
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-08
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-08
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-08
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-08
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-08
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-08
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-08
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-08
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-08
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-08
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-08
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-08
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-08
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-08
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-08
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-08
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-08
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-08
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-08
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-08
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-08
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-08
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-08
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-08
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-08
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-08
4din_B	381	Novel Localization And Quaternary Structure Of The		9e-08
4din_B	381	Novel Localization And Quaternary Structure Of The		6e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-08
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-07
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-07
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-07
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-07
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-07
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-07
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-07
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-07
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-07
1rl3_A	288	Crystal Structure Of Camp-free R1a Subunit Of Pka L		6e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		6e-07
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		6e-07
1ne4_A	283	Crystal Structure Of Rp-Camp Binding R1a Subunit Of		6e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		9e-07
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-06
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		1e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-06
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-06
2qcs_B	291	A Complex Structure Between The Catalytic And Regul		2e-06
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-06
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-06
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-06
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-06
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-06
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-06
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-06
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-06
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-06
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-06
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-06
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-06
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-06
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-06
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-06
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-06
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-06
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		3e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-06
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-06
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-06
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		6e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		6e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		6e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		6e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		6e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		7e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-06
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		7e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		7e-06
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		8e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		8e-06
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		8e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		9e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		9e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		9e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		1e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-05
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		1e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-05
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-05
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-05
3cf6_E	694	Structure Of Epac2 In Complex With Cyclic-Amp And R		2e-05
2byv_E	999	Structure Of The Camp Responsive Exchange Factor Ep		2e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-05
1o7f_A	469	Crystal Structure Of The Regulatory Domain Of Epac2		2e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-05
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		2e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-05
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-05
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-05
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		3e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-05
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-05
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		4e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-05
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		4e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		4e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		5e-05
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		5e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		5e-05
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		6e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		6e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		7e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		7e-05
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		7e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		7e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		7e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		7e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		7e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		7e-05
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		7e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		7e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		7e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		8e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		8e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		8e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		8e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-05
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		8e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		8e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		8e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		8e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		8e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		8e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		8e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		8e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		8e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		8e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		8e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		8e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		9e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		9e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		9e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		9e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		9e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		9e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		9e-05
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		9e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		9e-05
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		9e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		9e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		9e-05
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-04
3of1_A	246	Crystal Structure Of Bcy1, The Yeast Regulatory Sub		1e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-04
4f7z_A	999	Conformational Dynamics Of Exchange Protein Directl		2e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-04
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		3e-04
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		3e-04
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		3e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-04
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		3e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		3e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		3e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		3e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		3e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		4e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		4e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		4e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		5e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		5e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		5e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		6e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-04

>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals Novel Site Of Interchain Communication Length = 299

Iteration: 1
 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +T Y+ G+YIIRQGARGDTFFIISKGKV VT +   + +  ++RTL KGD+FGEKALQG+
Sbjct: 182 ETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGE 241
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 128
           D+RTAN++AA  E V+CLVID+++F  LI  LD++  K
Sbjct: 242 DVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNK 277

>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals Novel Site Of Interchain Communication Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 46/227 (20%)
Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y +   II++G  G   +++  GKV+VT       E   + T+  G  FGE A+  +  R
Sbjct: 67  YGKDSCIIKEGDVGSLVYVMEDGKVEVT------KEGVKLCTMGPGKVFGELAILYNCTR 120
Query: 94  TANIVAADPEGVSCLVIDQETFNQLI----------------------SSLDEIRTKYVD 131
           TA +       V    ID++ F  ++                      S  +EI +K  D
Sbjct: 121 TATVKTL--VNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLAD 178
Query: 132 ETSERRRLNEEF---RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS-- 186
              E    N E+   +  R     +I+       G+V + +          L+ + K   
Sbjct: 179 VLEETHYENGEYIIRQGARGDTFFIISK------GKVNVTREDSPNEDPVFLRTLGKGDW 232
Query: 187 ---QVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 230
              + +  +D+RTAN++AA  E V+CLVID+++F  LI  LD++  K
Sbjct: 233 FGEKALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNK 277

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 99  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G  ++
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT 218

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G  ++
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 198

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 65  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 99  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 99  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 159 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 64  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 123
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G  ++
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 183

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 71  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 130
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 73  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 133 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GG++++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GG++++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+K+ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 71  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 130
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 131 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score =  120 bits (302), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 81/116 (69%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+++ DFGFAK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I    N  F+VKL  +FKD   LYM++E   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+ KL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+ KL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ +Q +H ++EK I+   N  F+ KL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 79  KVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 138
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFGFAK++ G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ ++ +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+K+ DFG AK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 80/116 (68%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++V+ ++ +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR  G 
Sbjct: 78  KVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR 137
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F +   RFY A +V  F+YLHS ++IYRDLKPENL++   GY+++ DFG AK++ G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 57/207 (27%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           L D +++ TLG G FGRV L++   +  R +A+K +KK  V                   
Sbjct: 5   LQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIV------------------- 44
Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                              +R K V+ T++ R    IV                     F
Sbjct: 45  -------------------VRLKQVEHTNDERLMLSIV------------------THPF 67
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I++++ TF+D + ++M+M+   GGEL+++LR    F +   +FY A V  A +YLHS++I
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
           IYRDLKPEN+LL  +G++K+ DFGFAK
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAK 154

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 70  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 70  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 67  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 67  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 72  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 131
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 132 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 47  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 106
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 160

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 67  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 67  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 46  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 105
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 44  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 103
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 157

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 45  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 51  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 110
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 111 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 66  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 125
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 73/114 (64%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     GEL   +R  G+
Sbjct: 66  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 125
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY  F+D + LY  +     GEL   +R  G+
Sbjct: 74  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS 133
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 134 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            I++  +  ++  E+++M   +  F VKLY TF+D + LY  +     G L   +R  G+
Sbjct: 69  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS 128
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           FD+  TRFYTA +V A +YLH + II+RDLKPEN+LL+   ++++ DFG AK L
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++++         E++IM  AN  ++V+L+  F+D +YLYM+ME   GG+L  ++    N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 167
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +D  +   RFYTA VV A D +HS   I+RD+KP+N+LL  SG++KL DFG   K+
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++++         E++IM  AN  ++V+L+  F+D +YLYM+ME   GG+L  ++    N
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 162
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +D  +   RFYTA VV A D +HS   I+RD+KP+N+LL  SG++KL DFG   K+
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++++         E++IM  AN  ++V+L+  F+D +YLYM+ME   GG+L  ++    N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SN 167
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +D  +   RFYTA VV A D +HS   I+RD+KP+N+LL  SG++KL DFG   K+
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E++I+ E N  FIVKL+  F+ +  LY++++   GG+L+T L  +  F +   +FY A +
Sbjct: 77  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             A D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 178

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E++I+ E N  FIVKL+  F+ +  LY++++   GG+L+T L  +  F +   +FY A +
Sbjct: 76  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             A D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E++I+ E N  FIVKL+  F+ +  LY++++   GG+L+T L  +  F +   +FY A +
Sbjct: 76  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             A D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           I++ ++++HIMSE+ ++       F+V L+ +F+    LY +++   GGEL+  L+ +  
Sbjct: 76  ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC 135
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           F +   RFY A +  A  YLHS NI+YRDLKPEN+LL + G++ L DFG  K+ I
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++++         E++IM  AN  ++V+L+  F+D KYLYM+ME   GG+L  ++    N
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SN 168
Query: 303 FD--DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +D  +   +FYTA VV A D +HS  +I+RD+KP+N+LL   G++KL DFG   K+
Sbjct: 169 YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 224

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 202 ADPEGVSCL-VIDQETFNQ--LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKE 258
           ADP     L V+ Q +F +  L+  +    + ++      ++A   ++ R +     E++
Sbjct: 25  ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA--TLKVRDRVRTKMERD 82
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           I+ + N  F+VKL+  F+ +  LY++++   GG+L+T L  +  F +   +FY A +   
Sbjct: 83  ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI 181

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           ++A  +   +   H  +E+ I+ E    FIV L   F+    LY+++E   GGEL+  L 
Sbjct: 54  KKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +G F + T  FY A +  A  +LH + IIYRDLKPEN++L+  G+VKL DFG  K+ I
Sbjct: 114 REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           ++A  +   +   H  +E+ I+ E    FIV L   F+    LY+++E   GGEL+  L 
Sbjct: 54  KKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +G F + T  FY A +  A  +LH + IIYRDLKPEN++L+  G+VKL DFG  K+ I
Sbjct: 114 REGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 189 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 248
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 249 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 303

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 46  IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 105
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 106 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 160

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 245
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 47  IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 106
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 107 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 161

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 48  IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 107
Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I
Sbjct: 108 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 162

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 42  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 101
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 102 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 159

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M+EK I+  A N  F+ +L+  F+    L+ +ME   GG+L   ++    FD+A  RFY 
Sbjct: 71  MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           A ++ A  +LH + IIYRDLK +N+LL   G+ KL DFG  K+ I
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 44  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 103
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I
Sbjct: 104 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 161

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
           Q  M EK+I+ + +  FIV L   F+ K  L ++M    GG++    + +  D   F + 
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              FYTA +V   ++LH RNIIYRDLKPEN+LL   G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
           Q  M EK+I+ + +  FIV L   F+ K  L ++M    GG++    + +  D   F + 
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              FYTA +V   ++LH RNIIYRDLKPEN+LL   G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
           Q  M EK+I+ + +  FIV L   F+ K  L ++M    GG++    + +  D   F + 
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              FYTA +V   ++LH RNIIYRDLKPEN+LL   G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFDDA 306
           Q  M EK+I+ + +  FIV L   F+ K  L ++M    GG++    + +  D   F + 
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              FYTA +V   ++LH RNIIYRDLKPEN+LL   G V++ D G A +L
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           + VE  + +++  E +IM      F+V L+ +F+D++ ++M+++  LGG+L   L+   +
Sbjct: 52  KCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH 111
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           F + T + +   +V A DYL ++ II+RD+KP+N+LL   G+V + DF  A  L  PR
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML--PR 167

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 99  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 158
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 159 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 67  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 126
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 127 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 174

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I+++Y  F D+K +Y+++E    GEL+  L+  G FD+  + 
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +   + +A  Y H R +I+RD+KPENLL+   G +K+ DFG++
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I+++Y  F D+K +Y+++E    GEL+  L+  G FD+  + 
Sbjct: 59  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +   + +A  Y H R +I+RD+KPENLL+   G +K+ DFG++
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 162

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 52  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 111
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 112 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 159

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +    +   RFY
Sbjct: 56  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 115
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 116 SAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           ++A  + + +  +H  +E++++       F+V L+  F+ +  L+++++   GGEL+T L
Sbjct: 91  KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  F +   + Y   +V A ++LH   IIYRD+K EN+LL ++G+V L DFG +K+ +
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
Query: 358 G 358
Sbjct: 211 A 211

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
           E++++   +C +I  L+  F+D+ +LY++M+  +GG+L T+L + +    +   RFY   
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +V A D +H  + ++RD+KP+N+LL  +G+++L DFG   K+
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 241

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
           E++++   +C +I  L+  F+D+ +LY++M+  +GG+L T+L + +    +   RFY   
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +V A D +H  + ++RD+KP+N+LL  +G+++L DFG   K+
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM 225

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA-TTRFYTAC 314
           E++++   +  +I +L+  F+D+ YLY++ME  +GG+L T+L   G    A   RFY A 
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE 170
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +V A D +H    ++RD+KP+N+LL   G+++L DFG   KL
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    GE++  L+    FD+  T 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    GE++  L+    FD+  T 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 56/223 (25%)
Query: 133 TSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLD 192
           + +R++ +     ++L+D   +  LG G FG+V L    G     +A+K +KK  V+  D
Sbjct: 3   SEDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGT-EELYAIKILKKDVVIQDD 61
Query: 193 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQH 252
           D             V C ++++    ++++ LD              + P          
Sbjct: 62  D-------------VECTMVEK----RVLALLD--------------KPP---------- 80
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
                         F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY 
Sbjct: 81  --------------FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A +     +LH R IIYRDLK +N++L + G++K+ DFG  K+
Sbjct: 127 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 169

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVE----TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL 281
           E   K ++ T+ER    Q+ E    TR++ HI+  +++ G  +   I+ L  +++   ++
Sbjct: 121 EFAVKIMEVTAERLSPEQLEEVREATRRETHIL--RQVAGHPH---IITLIDSYESSSFM 175
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ +    GEL+  L +K    +  TR     ++EA  +LH+ NI++RDLKPEN+LL  
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 342 SGYVKLVDFGFAKKL 356
           +  ++L DFGF+  L
Sbjct: 236 NMQIRLSDFGFSCHL 250

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 56/210 (26%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
           L++ D  +   LG G FG+V L +     ++ FA+K +KK  V+  DD            
Sbjct: 15  LKIEDFELHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDD------------ 61
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
            V C ++++                              V +   +H             
Sbjct: 62  -VECTMVEKR-----------------------------VLSLAWEH------------- 78
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
            F+  ++ TF+ K+ L+ +ME   GG+L   ++    FD +   FY A ++    +LHS+
Sbjct: 79  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
            I+YRDLK +N+LL   G++K+ DFG  K+
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCKE 168

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 78  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 78  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 69  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 45  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 49  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 45  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 48  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 50  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 45  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 48  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 51  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 45  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 49  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 152

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           M EK ++  A    F+  ++ TF+ K+ L+ +ME   GG+L   ++    FD +   FY 
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           A ++    +LHS+ I+YRDLK +N+LL   G++K+ DFG  K+
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           ++   +C FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +++H+R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           ++   +C FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++  
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +++H+R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           ++   +C FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +++H+R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           ++   +C FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++  
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +++H+R ++YRDLKP N+LL   G+V++ D G A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 233 DETSERRRAPQI-----VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           D+ +   RA +I     V T     ++ E  ++   +   I+KLY  F+DK+  Y++ME 
Sbjct: 58  DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117
Query: 288 CLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GY 344
             GGEL+  +  +  F++         V+    YLH  NI++RDLKPENLLL +      
Sbjct: 118 YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL 177
Query: 345 VKLVDFGFA 353
           +K+VDFG +
Sbjct: 178 IKIVDFGLS 186

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 49  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD---FIVKLYKTFKDKKYLYM 283
           I  K V + S +  A +I+  R + +  ++KEI     C+    IVKL++ F D+ + ++
Sbjct: 26  ICRKCVHKKSNQAFAVKIISKRMEAN--TQKEITALKLCEGHPNIVKLHEVFHDQLHTFL 83
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           +ME   GGEL+  ++ K +F +    +    +V A  ++H   +++RDLKPENLL +   
Sbjct: 84  VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Query: 344 ---YVKLVDFGFAK 354
               +K++DFGFA+
Sbjct: 144 DNLEIKIIDFGFAR 157

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 49  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDATTRFYTAC 314
           E++++   +  +I  L+  F+D   LY++M+  +GG+L T+L + +    +   RFY A 
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +V A D +H  + ++RD+KP+N+L+  +G+++L DFG   KL+
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 56  QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+ + 
Sbjct: 116 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 161

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E EIM   +   I++LY+TF+D   +Y++ME C GGEL+  +  K  F ++        V
Sbjct: 73  EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 316 VEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKL 356
           + A  Y H  N+ +RDLKPEN L    S    +KL+DFG A + 
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV 315
           E EIM   +   I++LY+TF+D   +Y++ME C GGEL+  +  K  F ++        V
Sbjct: 56  EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 316 VEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKL 356
           + A  Y H  N+ +RDLKPEN L    S    +KL+DFG A + 
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 59  QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+ + 
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           E+  K +D+T         + +   Q +  E  IM   N   IVKL++  + +K LY++M
Sbjct: 41  EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GGE++  L   G   +   R     +V A  Y H + I++RDLK ENLLL     +
Sbjct: 93  EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
           K+ DFGF+ + 
Sbjct: 153 KIADFGFSNEF 163

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           E+  K +D+T         + +   Q +  E  IM   N   IVKL++  + +K LY++M
Sbjct: 41  EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GGE++  L   G   +   R     +V A  Y H + I++RDLK ENLLL     +
Sbjct: 93  EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
           K+ DFGF+ + 
Sbjct: 153 KIADFGFSNEF 163

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           E+  K +D+T         + +   Q +  E  IM   N   IVKL++  + +K LY++M
Sbjct: 41  EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GGE++  L   G   +   R     +V A  Y H + I++RDLK ENLLL     +
Sbjct: 93  EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 152
Query: 346 KLVDFGFAKKL 356
           K+ DFGF+ + 
Sbjct: 153 KIADFGFSNEF 163

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ +FG++
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    FD+  T 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ +FG++
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGPRY 361
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+  G +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY 175

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW--TIL 297
           +   +  T     ++ E  ++ + +   I+KLY+ F+DK+  Y++ME   GGEL+   IL
Sbjct: 38  KKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL 97
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
           R K  F +         V+    YLH  NI++RDLKPENLLL   S    +K+VDFG +
Sbjct: 98  RQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 58  QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+ + 
Sbjct: 118 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 58  QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+ + 
Sbjct: 118 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 233 DETSERRRAPQIVE------TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           D+ +   RA +I++      T     ++ E  ++ + +   I+KLY+ F+DK+  Y++ME
Sbjct: 42  DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVME 101
Query: 287 SCLGGELW--TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---ST 341
              GGEL+   ILR K  F +         V+    YLH  NI++RDLKPENLLL   S 
Sbjct: 102 VYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR 159
Query: 342 SGYVKLVDFGFA 353
              +K+VDFG +
Sbjct: 160 DALIKIVDFGLS 171

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           E+  K +D+T         + +   Q +  E  IM   N   IVKL++  + +K LY++M
Sbjct: 34  EVAVKIIDKTQ--------LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVM 85
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GGE++  L   G   +   R     +V A  Y H + I++RDLK ENLLL     +
Sbjct: 86  EYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNI 145
Query: 346 KLVDFGFAKKL 356
           K+ DFGF+ + 
Sbjct: 146 KIADFGFSNEF 156

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 59  QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+ + 
Sbjct: 119 KFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 58/213 (27%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
           ++L+D   +  LG G FG+V L +  G     +A+K +KK  V+  DD            
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDD------------ 384
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG-EAN 264
            V C                                            M EK ++     
Sbjct: 385 -VEC-------------------------------------------TMVEKRVLALPGK 400
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
             F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY A +     +L S
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           + IIYRDLK +N++L + G++K+ DFG  K+ I
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
            + I +E  ++   +   I+KL+  F+DKKY Y++ E   GGEL+  + ++  FD+    
Sbjct: 90  HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
                ++    YLH  NI++RD+KPEN+LL        +K+VDFG +
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTR 309
           Q + +E +I  +     I++LY  F+D  Y+Y+++E C  GE+   L+++   F +   R
Sbjct: 56  QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR 115
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
            +   ++    YLHS  I++RDL   NLLL+ +  +K+ DFG A +L  P 
Sbjct: 116 HFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 58/213 (27%)
Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
           ++L+D   +  LG G FG+V L +  G     +A+K +KK  V+  DD            
Sbjct: 17  MKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDD------------ 63
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG-EAN 264
            V C                                            M EK ++     
Sbjct: 64  -VEC-------------------------------------------TMVEKRVLALPGK 79
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
             F+ +L+  F+    LY +ME   GG+L   ++  G F +    FY A +     +L S
Sbjct: 80  PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           + IIYRDLK +N++L + G++K+ DFG  K+ I
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 211 VIDQETFNQLISSLDEIRTK--YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
           V+ + +F ++I   D+I  +   V   S+R    Q+ +   ++ ++ E +++ + +   I
Sbjct: 56  VLGKGSFGEVILCKDKITGQECAVKVISKR----QVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           +KLY+ F+DK Y Y++ E   GGEL+  +  +  F +         V+    Y+H   I+
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 329 YRDLKPENLLL---STSGYVKLVDFGFA 353
           +RDLKPENLLL   S    ++++DFG +
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLS 199

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 211 VIDQETFNQLISSLDEIRTK--YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
           V+ + +F ++I   D+I  +   V   S+R    Q+ +   ++ ++ E +++ + +   I
Sbjct: 57  VLGKGSFGEVILCKDKITGQECAVKVISKR----QVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           +KLY+ F+DK Y Y++ E   GGEL+  +  +  F +         V+    Y+H   I+
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 329 YRDLKPENLLL---STSGYVKLVDFGFA 353
           +RDLKPENLLL   S    ++++DFG +
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLS 200

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 211 VIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
           V+ + +F ++I   D+I  +        +R  Q+ +   ++ ++ E +++ + +   I+K
Sbjct: 39  VLGKGSFGEVILCKDKITGQECAVKVISKR--QVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
           LY+ F+DK Y Y++ E   GGEL+  +  +  F +         V+    Y+H   I++R
Sbjct: 97  LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 331 DLKPENLLL---STSGYVKLVDFGFA 353
           DLKPENLLL   S    ++++DFG +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLS 182

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   ++ ++ E +++ + +   I+KLY+ F+DK Y Y++ E   GGEL+  +  +  
Sbjct: 63  QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
           F +         V+    Y+H   I++RDLKPENLLL   S    ++++DFG +
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           + I +E E++   +   I+K+++ F+D   +Y++ME+C GGEL   +        A +  
Sbjct: 65  EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 311 YTACVVE----AFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAK 354
           Y A +++    A  Y HS++++++DLKPEN+L    S    +K++DFG A+
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 219

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD 304
           ++R  Q +  E  +        IV+   +F +  ++ + ME   GG L  +LR K G   
Sbjct: 59  DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
Query: 305 D--ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
           D   T  FYT  ++E   YLH   I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD 304
           ++R  Q +  E  +        IV+   +F +  ++ + ME   GG L  +LR K G   
Sbjct: 45  DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 104
Query: 305 D--ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
           D   T  FYT  ++E   YLH   I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 105 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 82  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 183

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 73  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 174

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 72  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 173

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 74  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 175

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A +++ET+ ++ +   + E EI+   +  +IVKL   +     L++++E C GG +  I+
Sbjct: 40  AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 99
Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
              D+G   +   +     ++EA ++LHS+ II+RDLK  N+L++  G ++L DFG + K
Sbjct: 100 LELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 66  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A +++ET+ ++ +   + E EI+   +  +IVKL   +     L++++E C GG +  I+
Sbjct: 48  AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107
Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
              D+G   +   +     ++EA ++LHS+ II+RDLK  N+L++  G ++L DFG + K
Sbjct: 108 LELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 66  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 167

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +         + 
Sbjct: 67  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 168

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           E+  K +D+T         + +   Q +  E  I    N   IVKL++  + +K LY++ 
Sbjct: 41  EVAVKIIDKTQ--------LNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVX 92
Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           E   GGE++  L   G   +   R     +V A  Y H + I++RDLK ENLLL     +
Sbjct: 93  EYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNI 152
Query: 346 KLVDFGFAKKL 356
           K+ DFGF+ + 
Sbjct: 153 KIADFGFSNEF 163

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   ++ ++ E +++ + +   I KLY+ F+DK Y Y++ E   GGEL+  +  +  
Sbjct: 63  QVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFA 353
           F +         V+    Y H   I++RDLKPENLLL   S    ++++DFG +
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  ++ K Y ++     L+++ME   GG    +LR  G FD+        
Sbjct: 69  QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-AGPFDEFQIATMLK 127
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 170

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFY 311
           ++EK+I+ + N  F+V L   ++ K  L +++    GG+L   +   G   F +A   FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            A +    + LH   I+YRDLKPEN+LL   G++++ D G A
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFY 311
           ++EK+I+ + N  F+V L   ++ K  L +++    GG+L   +   G   F +A   FY
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            A +    + LH   I+YRDLKPEN+LL   G++++ D G A
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KGNFDDATTR 309
           M E +++ +   + +V L +  K KK  Y++ E        TIL D        D    +
Sbjct: 72  MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQ 127
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            Y   ++    + HS NII+RD+KPEN+L+S SG VKL DFGFA+ L  P
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 61  NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 60  NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 61  NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 61  NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 193 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET----- 247
           DL T N+        +    D + F +L      +  + V +T  +  A +I+ T     
Sbjct: 12  DLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + +A 
Sbjct: 72  RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
                  ++E+ +++H  +I++RDLKPENLLL++      VKL DFG A ++ G
Sbjct: 132 ASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 169
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 170 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 67  NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY+       ++M+ME   GGEL+  +   G  D+  +R     ++   DY H   +
Sbjct: 78  IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RDLKPEN+LL      K+ DFG +  +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMM 166

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 263 ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVV 316
           + C  IV++   +++    +K L ++ E   GGEL++ ++D+G+  F +         + 
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 317 EAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKK 355
           EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 75  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 67  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 126
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 127 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 175

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 51  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 111 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 159

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
           A+D E ++  V+ Q  F Q++ + + + ++Y     + R   + + T     I+SE  ++
Sbjct: 5   ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVMLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
              N  ++V+ Y  +             K K  L++ ME C  G L+ ++  + N +   
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++     ++EA  Y+HS+ II+RDLKP N+ +  S  VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +V L + F+ K+ L+++ E C    L  + R +    +   +  T   ++A ++ H  N 
Sbjct: 64  LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           I+RD+KPEN+L++    +KL DFGFA+ L GP
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGP 155

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 186 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           ++ +E EI+ + N   I+K+ K F D +  Y+++E   GGEL+  +       +AT + Y
Sbjct: 200 NVETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
              ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 233 DETSERRRAPQIVETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           ++ S R+ A ++++ R+QQ    + +E  IM +     +V++YK++   + L++LME   
Sbjct: 66  EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
           GG L  I+  +   ++         V++A  YLH++ +I+RD+K +++LL+  G VKL D
Sbjct: 126 GGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 350 FGFAKKL 356
           FGF  ++
Sbjct: 185 FGFCAQI 191

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV LY   ++  ++ + ME   GG L  +++++G   +    +Y    +E  +YLHSR I
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 328 IYRDLKPENLLLSTSG-YVKLVDFGFA 353
           ++ D+K +N+LLS+ G +  L DFG A
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHA 233

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV LY   ++  ++ + ME   GG L  +++++G   +    +Y    +E  +YLHSR I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 328 IYRDLKPENLLLSTSG-YVKLVDFGFA 353
           ++ D+K +N+LLS+ G +  L DFG A
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHA 214

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI--LRDKGNFDDATT 308
           Q I+ E  IM + +   +VK Y ++     L+++ME C  G +  I  LR+K   +D   
Sbjct: 69  QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +  ++  +YLH    I+RD+K  N+LL+T G+ KL DFG A +L
Sbjct: 129 TILQS-TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  ++ K Y ++     L+++ME   GG    +L + G  D+        
Sbjct: 68  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 126
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A ++++T+ ++ +   M E +I+   +   IVKL   F  +  L++L+E C GG +  ++
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
            + +    ++  +      ++A +YLH   II+RDLK  N+L +  G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A ++++T+ ++ +   M E +I+   +   IVKL   F  +  L++L+E C GG +  ++
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
            + +    ++  +      ++A +YLH   II+RDLK  N+L +  G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 241 APQIVETRQQQHI---MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           A ++++T+ ++ +   M E +I+   +   IVKL   F  +  L++L+E C GG +  ++
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 298 RD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
            + +    ++  +      ++A +YLH   II+RDLK  N+L +  G +KL DFG + K
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY+        +M+ME   GGEL+  +   G  ++   R     ++ A DY H   +
Sbjct: 73  IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RDLKPEN+LL      K+ DFG +  +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY+        +M+ME   GGEL+  +   G  ++   R     ++ A DY H   +
Sbjct: 73  IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RDLKPEN+LL      K+ DFG +  +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  ++ K Y ++     L+++ME   GG    +L + G  D+        
Sbjct: 73  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 131
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 174

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  ++ K Y ++     L+++ME   GG    +L + G  D+        
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 111
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  ++ K Y ++     L+++ME   GG    +L + G  D+        
Sbjct: 53  QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR 111
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           QI +   +  +  E EI    +   I++LY  F D++ +Y+++E    GEL+  L+    
Sbjct: 60  QIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT 119
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           FD+  T      + +A  Y H + +I+RD+KPENLLL   G +K+ DFG++
Sbjct: 120 FDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L++     +    
Sbjct: 58  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 117
Query: 310 FYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V+    YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 118 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 166

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
           +++ G  N   I++L  T++   + +++ +    GEL+  L +K    +  TR     ++
Sbjct: 78  RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           E    LH  NI++RDLKPEN+LL     +KL DFGF+ +L
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
           +++ G  N   I++L  T++   + +++ +    GEL+  L +K    +  TR     ++
Sbjct: 78  RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           E    LH  NI++RDLKPEN+LL     +KL DFGF+ +L
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     I+ L+  F++K  + +++E   
Sbjct: 32  EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 91
Query: 290 GGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGY 344
           GGEL+  L +K +  +D  T+F    +++   YLHS+ I + DLKPEN++L      +  
Sbjct: 92  GGELFDFLAEKESLTEDEATQFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 150
Query: 345 VKLVDFGFAKKL 356
           +KL+DFG A K+
Sbjct: 151 IKLIDFGIAHKI 162

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     I+ L+  F++K  + +++E   
Sbjct: 39  EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 98
Query: 290 GGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGY 344
           GGEL+  L +K +  +D  T+F    +++   YLHS+ I + DLKPEN++L      +  
Sbjct: 99  GGELFDFLAEKESLTEDEATQFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 157
Query: 345 VKLVDFGFAKKL 356
           +KL+DFG A K+
Sbjct: 158 IKLIDFGIAHKI 169

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF-DDATT 308
           ++ I  E  I+ E     I+ L+  F++K  + +++E   GGEL+  L +K +  +D  T
Sbjct: 73  REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKL 356
           +F    +++   YLHS+ I + DLKPEN++L      +  +KL+DFG A K+
Sbjct: 133 QFLKQ-ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVV 316
           +++ G  N   I++L  T++   + +++ +    GEL+  L +K    +  TR     ++
Sbjct: 65  RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           E    LH  NI++RDLKPEN+LL     +KL DFGF+ +L
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
           A+D E ++  V+ Q  F Q++ + + + ++Y     + R   + + T     I+SE  ++
Sbjct: 5   ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVMLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
              N  ++V+ Y  +             K K  L++ ME C    L+ ++  + N +   
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++     ++EA  Y+HS+ II+RDLKP N+ +  S  VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V +T+    A +I+ T     R  Q +  E  I  +     IV+L+ + +++ + Y++ +
Sbjct: 49  VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
              GGEL+  +  +  + +A        ++E+  Y HS  I++R+LKPENLLL++     
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 344 YVKLVDFGFA 353
            VKL DFG A
Sbjct: 169 AVKLADFGLA 178

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
           G+ C+  ++ T  Q       +  K +D   ++RR          + + +E  IM + + 
Sbjct: 59  GIVCIATEKHTGKQ-------VAVKKMDLRKQQRR----------ELLFNEVVIMRDYHH 101
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC--VVEAFDYLH 323
           D +V +Y ++     L+++ME   GG L  I+      ++   +  T C  V+ A  YLH
Sbjct: 102 DNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIATVCLSVLRALSYLH 158
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ +I+RD+K +++LL++ G +KL DFGF  ++
Sbjct: 159 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 191

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V +T+    A +I+ T     R  Q +  E  I  +     IV+L+ + +++ + Y++ +
Sbjct: 26  VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
              GGEL+  +  +  + +A        ++E+  Y HS  I++R+LKPENLLL++     
Sbjct: 86  LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 344 YVKLVDFGFA 353
            VKL DFG A
Sbjct: 146 AVKLADFGLA 155

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V +T+    A +I+ T     R  Q +  E  I  +     IV+L+ + +++ + Y++ +
Sbjct: 25  VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 84
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
              GGEL+  +  +  + +A        ++E+  Y HS  I++R+LKPENLLL++     
Sbjct: 85  LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 344 YVKLVDFGFA 353
            VKL DFG A
Sbjct: 145 AVKLADFGLA 154

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 232 VDETSERRRAPQIVET-----RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V +T+    A +I+ T     R  Q +  E  I  +     IV+L+ + +++ + Y++ +
Sbjct: 26  VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85
Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
              GGEL+  +  +  + +A        ++E+  Y HS  I++R+LKPENLLL++     
Sbjct: 86  LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 344 YVKLVDFGFA 353
            VKL DFG A
Sbjct: 146 AVKLADFGLA 155

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 241 APQIVETR---QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWT-I 296
           A +I++TR    ++ + +E  +M + +   +++LY  F+ K  + ++ME   GGEL+  I
Sbjct: 118 AAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI 177
Query: 297 LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAK 354
           + +  N  +  T  +   + E   ++H   I++ DLKPEN+L     +  +K++DFG A+
Sbjct: 178 IDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
Query: 355 K 355
           +
Sbjct: 238 R 238

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 84  QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I+ L   + D K++Y++ E   GGEL   ILR K  F +    F    + +  +YLHS+ 
Sbjct: 83  IITLKDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
           +++RDLKP N+L +  SG    +++ DFGFAK+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 84  QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKGNFDDATT 308
           + +  E  I+ + +   +VKL +   D    +LYM+ E    G +  +   K   +D   
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-QA 139
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           RFY   +++  +YLH + II+RD+KP NLL+   G++K+ DFG + +  G
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 65  QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 124 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 157

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 64  QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 123 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 156

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           + + D I++LY      +Y+YM+ME C   +L + L+ K + D    + Y   ++EA   
Sbjct: 68  QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 322 LHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 127 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 160

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KL + F+    + +++E   GGEL+  + +KG + +         ++EA  YLH   I
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 328 IYRDLKPENLLLSTS---GYVKLVDFGFAK 354
           ++RDLKPENLL +T      +K+ DFG +K
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSK 199

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I+ L   + D K++Y++ E   GGEL   ILR K  F +    F    + +  +YLHS+ 
Sbjct: 83  IITLKDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
           +++RDLKP N+L +  SG    +++ DFGFAK+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175

>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 23  LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK-----YIRTLY 77
           L +V       Y +G+ II QG   D+FFI+  G+VK+TMK+   +E +      I   +
Sbjct: 284 LKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCF 343
Query: 78  KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
           +G +FGE AL  +  R A+  A     V CL +D + F +L+    EI  + +
Sbjct: 344 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 394

>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 51/239 (21%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +   KEG+++I QG  GD F++I +G   + +K       + +        FGE AL  +
Sbjct: 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 227
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
             + A I A  P  +  L  D+ TF ++I          V   +++R++ E F       
Sbjct: 228 TPKAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 275
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
           +SL +S+ L+V+  +G   +   E +   GD + SF           +K+  KS+V    
Sbjct: 276 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENG 335
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
            +  A            +V   P   S        CL +D + F +L+    EI  + +
Sbjct: 336 AVEIARCFRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 394

>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 23  LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK-----YIRTLY 77
           L +V       Y +G+ II QG   D+FFI+  G+VK+TMK+   +E +      I   +
Sbjct: 284 LKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCF 343
Query: 78  KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
           +G +FGE AL  +  R A+  A     V CL +D + F +L+    EI  + +
Sbjct: 344 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 394

>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric Holoenzyme Length = 416

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 51/239 (21%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +   KEG+++I QG  GD F++I +G   + +K       + +        FGE AL  +
Sbjct: 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 227
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
             + A I A  P  +  L  D+ TF ++I          V   +++R++ E F       
Sbjct: 228 TPKAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 275
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
           +SL +S+ L+V+  +G   +   E +   GD + SF           +K+  KS+V    
Sbjct: 276 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENG 335
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
            +  A            +V   P   S        CL +D + F +L+    EI  + +
Sbjct: 336 AVEIARCFRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 394

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN----FDDATTRFYTACVVEAFDYLH 323
           IV+L +T+     LYM+ E   G +L   +  + +    + +A    Y   ++EA  Y H
Sbjct: 88  IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
             NII+RD+KPEN+LL++   S  VKL DFG A +L
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL 183

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGNFDDA 306
           + +Q +    +  G  +   I+ +Y+     K+ L ++ME   GGEL++ ++++G  D A
Sbjct: 67  KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG--DQA 124
Query: 307 TTRFYTACVVE----AFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKK 355
            T    A ++     A  +LHS NI +RD+KPENLL ++      +KL DFGFAK+
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV LY   ++  ++ + ME   GG L  +++  G   +    +Y    +E  +YLH+R I
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
           ++ D+K +N+LLS+ G    L DFG A
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHA 214

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY   K K  + M++E   G EL+  +  +    +   R +   ++ A +Y H   I
Sbjct: 76  IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           ++RDLKPENLLL     VK+ DFG +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLS 160

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I+ E E++ + +   I+KL++  +D    Y++ E   GGEL+  +  +  F +       
Sbjct: 68  ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
             V     Y+H  NI++RDLKPEN+LL +      +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY   K K  + M++E   G EL+  +  +    +   R +   ++ A +Y H   I
Sbjct: 75  IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           ++RDLKPENLLL     VK+ DFG +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLS 159

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY   K K  + M++E   G EL+  +  +    +   R +   ++ A +Y H   I
Sbjct: 66  IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           ++RDLKPENLLL     VK+ DFG +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLS 150

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV LY   ++  ++ + ME   GG L  +++  G   +    +Y    +E  +YLH+R I
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
           ++ D+K +N+LLS+ G    L DFG A
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHA 198

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGNFDDA 306
           + +Q +    +  G  +   I+ +Y+     K+ L ++ME   GGEL++ ++++G  D A
Sbjct: 48  KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG--DQA 105
Query: 307 TTRFYTACVVE----AFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKK 355
            T    A ++     A  +LHS NI +RD+KPENLL ++      +KL DFGFAK+
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 161

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I+KLY   K K  + M++E   G EL+  +  +    +   R +   ++ A +Y H   I
Sbjct: 70  IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           ++RDLKPENLLL     VK+ DFG +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLS 154

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + 
Sbjct: 42  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG 358
           +A        ++E+ ++ H   I++RDLKPENLLL   S    VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV LY   ++  ++ + ME   GG L  +++  G   +    +Y    +E  +YLH+R I
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 328 IYRDLKPENLLLSTSGY-VKLVDFGFA 353
           ++ D+K +N+LLS+ G    L DFG A
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHA 212

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + 
Sbjct: 42  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG 358
           +A        ++E+ ++ H   I++RDLKPENLLL   S    VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 25  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 85  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 143
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 144 ISDFGLA 150

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 26  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 85
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 86  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 144
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 145 ISDFGLA 151

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 201 AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM 260
           A+D E ++  V+ Q  F Q++ + + + ++Y     + R   + + T     I+SE  ++
Sbjct: 5   ASDFEEIA--VLGQGAFGQVVKARNALDSRYY-AIKKIRHTEEKLST-----ILSEVXLL 56
Query: 261 GEANCDFIVKLYKTF-------------KDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
              N  ++V+ Y  +             K K  L++  E C    L+ ++  + N +   
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQR 115
Query: 308 TRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++     ++EA  Y+HS+ II+R+LKP N+ +  S  VK+ DFG AK +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 VDETSERRRAPQIVETRQ----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           V+  +E   A +IV+ ++     ++I  E  I    N + +VK Y   ++    Y+ +E 
Sbjct: 27  VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 288 CLGGELWT-ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVK 346
           C GGEL+  I  D G  +    RF+   ++    YLH   I +RD+KPENLLL     +K
Sbjct: 87  CSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHGIGITHRDIKPENLLLDERDNLK 145
Query: 347 LVDFGFA 353
           + DFG A
Sbjct: 146 ISDFGLA 152

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 256 EKEIMGEANCD--FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           ++EI   + CD  +I + + ++     L+++ME   GG    +L+  G  ++        
Sbjct: 65  QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILR 123
Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 166

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I+ E E++ + +   I+KL++  +D    Y++ E   GGEL+  +  +  F +       
Sbjct: 68  ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
             V     Y+H  NI++RDLKPEN+LL +      +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y HS  I
Sbjct: 78  IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAKKLI 357
            +RDLK EN LL  S +  +K+ DFG++K  +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
           GV+ L+ D+++ N+L++     R + +DE  +R    +I+  R  +H             
Sbjct: 32  GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 73
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
             IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y H+ 
Sbjct: 74  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
            + +RDLK EN LL  S +  +K+ DFG++K
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 248 RQQQHIMSEKEI--MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           +   H+  E+EI  +       I+KLY        + M++E   GGEL+  + +K    +
Sbjct: 49  KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE 107
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
              R +   ++ A +Y H   I++RDLKPENLLL  +  VK+ DFG +
Sbjct: 108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
           GV+ L+ D++  N+L++     R + +DE  +R    +I+  R  +H             
Sbjct: 33  GVARLMRDKQA-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
             IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y H+ 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
            + +RDLK EN LL  S +  +K+ DFG++K
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I+ E E++ + +   I+KL++  +D    Y++ E   GGEL+  +  +  F +       
Sbjct: 68  ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFA 353
             V     Y+H  NI++RDLKPEN+LL +      +K++DFG +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + 
Sbjct: 60  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 119
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
           +A        ++EA  + H   +++RDLKPENLLL++      VKL DFG A ++ G
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I+ L   + D KY+Y++ E   GGEL   ILR K  F +         + +  +YLH++ 
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQG 136
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
           +++RDLKP N+L +  SG    +++ DFGFAK+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I+ L   + D KY+Y++ E   GGEL   ILR K  F +         + +  +YLH++ 
Sbjct: 78  IITLKDVYDDGKYVYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQG 136
Query: 327 IIYRDLKPENLL-LSTSG---YVKLVDFGFAKKL 356
           +++RDLKP N+L +  SG    +++ DFGFAK+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + 
Sbjct: 42  LSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
           +A        ++EA  + H   +++RDLKPENLLL++      VKL DFG A ++ G
Sbjct: 102 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 158

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWT-ILRDKGNFDDATTRFY 311
           + +E  IM + +   ++ L+  F+DK  + +++E   GGEL+  I  +     +A    Y
Sbjct: 95  VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 154
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
                E   ++H  +I++ D+KPEN++  T  +  VK++DFG A KL
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     I+ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 276 KDKKYLYMLMESCLGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLK 333
           ++K+ +YM+ME C+ G  E+   + +K  F       Y   +++  +YLHS+ I+++D+K
Sbjct: 78  EEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIK 136
Query: 334 PENLLLSTSGYVKLVDFGFAKKL 356
           P NLLL+T G +K+   G A+ L
Sbjct: 137 PGNLLLTTGGTLKISALGVAEAL 159

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent Protein Kinase Length = 310

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 23  LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNST------EEKYIRTL 76
           + IV    +  YK+G+ II QG + D+F+II  G+V + ++    +      +E  I   
Sbjct: 177 MKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHC 236
Query: 77  YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
           +KG +FGE AL  +  R A+        V CLV+D + F +L+    +I  + +    E+
Sbjct: 237 HKGQYFGELALVTNKPRAASAYGVGD--VKCLVMDVQAFERLLGPCMDIMKRNISHYEEQ 294

>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent Protein Kinase Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD---FFGEKAL 87
           +   K  +++I QG  GD F++I +G   + + + N T     R++ + D    FGE AL
Sbjct: 63  EKIVKTDEHVIDQGDDGDNFYVIERGTYDILVTKDNQT-----RSVGQYDNRGSFGELAL 117
Query: 88  QGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLR 147
             +  R A I+A   EG S   +D+ TF ++I   +  + K  +   E   L   F+SL 
Sbjct: 118 MYNTPRAATIIAT-SEG-SLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPL---FKSLE 172
Query: 148 LSD-LRVITTLGVGGFGRVELVQIAGDPSRSF---------------------------A 179
           +S+ ++++  +G   +   E +   G+ + SF                            
Sbjct: 173 MSERMKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVE 232
Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVS---CLVIDQETFNQLISSLDEIRTKYVDETS 236
           +    K Q      L T    AA   GV    CLV+D + F +L+    +I  + +    
Sbjct: 233 IAHCHKGQYFGELALVTNKPRAASAYGVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYE 292
Query: 237 ER 238
           E+
Sbjct: 293 EQ 294

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 37  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 97  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 157 KIIDFGLAHKI 167

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 37  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 96
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 97  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 157 KIIDFGLAHKI 167

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 60  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 120 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L  K +  +    
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKL 356
            +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 220 LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK 279
           L+ S ++ R   + E +  R     + +++++    E  ++       IV+  ++F++  
Sbjct: 42  LVKSTEDGRQYVIKEINISR-----MSSKEREESRREVAVLANMKHPNIVQYRESFEENG 96
Query: 280 YLYMLMESCLGGELWT-ILRDKGNF---DDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
            LY++M+ C GG+L+  I   KG     D     F   C+  A  ++H R I++RD+K +
Sbjct: 97  SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL--ALKHVHDRKILHRDIKSQ 154
Query: 336 NLLLSTSGYVKLVDFGFAKKL 356
           N+ L+  G V+L DFG A+ L
Sbjct: 155 NIFLTKDGTVQLGDFGIARVL 175

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           +++P   ++  +  I   K+I  E     IV L   ++   + Y++M+   GGEL+  + 
Sbjct: 43  KKSPAFRDSSLENEIAVLKKIKHEN----IVTLEDIYESTTHYYLVMQLVSGGELFDRIL 98
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAK 354
           ++G + +         V+ A  YLH   I++RDLKPENLL  T   +  + + DFG +K
Sbjct: 99  ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 61  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 120
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 121 AVCRECL-QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 167

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ + +E  I    +   +V  +  F+D  ++Y+++E C    L  + + +   
Sbjct: 80  LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R++    ++   YLH+  +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ + +E  I    +   +V  +  F+D  ++Y+++E C    L  + + +   
Sbjct: 80  LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R++    ++   YLH+  +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
           + E  I+ E     IVKLY     KK L ++ E  L  +L  +L   +G  +  T + + 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    Y H R +++RDLKP+NLL++  G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
           + E  I+ E     IVKLY     KK L ++ E  L  +L  +L   +G  +  T + + 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    Y H R +++RDLKP+NLL++  G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ + +E  I    +   +V  +  F+D  ++Y+++E C    L  + + +   
Sbjct: 80  LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 139
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R++    ++   YLH+  +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ + +E  I    +   +V  +  F+D  ++Y+++E C    L  + + +   
Sbjct: 64  LLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV 123
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R++    ++   YLH+  +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATTRFYT 312
           + E  I+ E     IVKLY     KK L ++ E  L  +L  +L   +G  +  T + + 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    Y H R +++RDLKP+NLL++  G +K+ DFG A+
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
           QQ+    E +I+   + DFIVK Y+       ++ L ++ME    G L   L R +   D
Sbjct: 54  QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 112
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +    Y++ + +  +YL SR  ++RDL   N+L+ +  +VK+ DFG AK L
Sbjct: 113 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
           QQ+    E +I+   + DFIVK Y+       ++ L ++ME    G L   L R +   D
Sbjct: 67  QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 125
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +    Y++ + +  +YL SR  ++RDL   N+L+ +  +VK+ DFG AK L
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
           QQ+    E +I+   + DFIVK Y+       ++ L ++ME    G L   L R +   D
Sbjct: 55  QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD 113
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +    Y++ + +  +YL SR  ++RDL   N+L+ +  +VK+ DFG AK L
Sbjct: 114 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGGELWTIL-RDKGNFD 304
           QQ+    E +I+   + DFIVK Y+       +  L ++ME    G L   L R +   D
Sbjct: 51  QQRDFQREIQILKALHSDFIVK-YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLD 109
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +    Y++ + +  +YL SR  ++RDL   N+L+ +  +VK+ DFG AK L
Sbjct: 110 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D  +F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKDFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 156

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEH--------VHQDLKTFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I        IV+L+ +  ++ + Y++ +   GGEL+  +  +  + 
Sbjct: 49  LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
           +A        ++EA  + H   +++R+LKPENLLL++      VKL DFG A ++ G
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y H+  +
Sbjct: 77  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAK 354
            +RDLK EN LL  S +  +K+ DFG++K
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK 165

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 158

>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta Regulatory Subunit Of Camp-Dependent Protein Kinase Length = 305

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 23  LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNST--EEK---YIRTLY 77
           L +V       Y +G+ II QG   D+FFI+  G+V++TMK+   +  EE     I    
Sbjct: 173 LKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCL 232
Query: 78  KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV 130
           +G +FGE AL  +  R A+  A     V CL +D + F +L+    EI  + +
Sbjct: 233 RGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNI 283

>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta Regulatory Subunit Of Camp-Dependent Protein Kinase Length = 305

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +   KEG+++I QG  GD F++I +G   + +K       + +        FGE AL  +
Sbjct: 59  EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVG--RCVGNYDNRGSFGELALMYN 116
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEF------- 143
             R A I A  P  +  L  D+ TF ++I          V   +++R++ E F       
Sbjct: 117 TPRAATITATSPGALWGL--DRVTFRRII----------VKNNAKKRKMYESFIESLPFL 164
Query: 144 RSLRLSD-LRVITTLGVGGFGRVELVQIAGDPSRSF----------ALKQMKKSQVMNLD 192
           +SL +S+ L+V+  +G   +   E +   GD + SF           +K+  KS +    
Sbjct: 165 KSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENG 224
Query: 193 DLRTAN-----------IVAADPEGVS--------CLVIDQETFNQLISSLDEIRTKYV 232
            +  A            +V   P   S        CL +D + F +L+    EI  + +
Sbjct: 225 AVEIARCLRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNI 283

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 184 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 242
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 243 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 107 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 165
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 166 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           P+     ++  I +E  ++ +   + IV L   ++   +LY++M+   GGEL+  + +KG
Sbjct: 56  PKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG 115
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAK 354
            + +         V++A  YLH   I++RDLKPENLL  +      + + DFG +K
Sbjct: 116 FYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 64  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 122
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 123 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 55/173 (31%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           K +++   R+  P+ VE      I +E  +M + +   I +LY+ ++D++Y+ ++ME C 
Sbjct: 57  KIMNKNKIRQINPKDVE-----RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCH 111
Query: 290 GGELWTILRDKGN--FDDATTRF--------YTAC------------------------- 314
           GG L     DK N   DD+T +            C                         
Sbjct: 112 GGHLL----DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167
Query: 315 ---------VVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
                    +  A  YLH++ I +RD+KPEN L ST  S  +KLVDFG +K+ 
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L   ++   +LY++M+   GGEL+  + +KG + +         V++A  YLH   I
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
           ++RDLKPENLL   L     + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L   ++   +LY++M+   GGEL+  + +KG + +         V++A  YLH   I
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
           ++RDLKPENLL   L     + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 62  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THT 120
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 121 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L   ++   +LY++M+   GGEL+  + +KG + +         V++A  YLH   I
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
           ++RDLKPENLL   L     + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV L   ++   +LY++M+   GGEL+  + +KG + +         V++A  YLH   I
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 328 IYRDLKPENLL---LSTSGYVKLVDFGFAK 354
           ++RDLKPENLL   L     + + DFG +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 53  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 111
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 112 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI----LRDKGNFDDATTRFYTACVVEAF 319
           +C  ++ L++ +++   + +++E   GGE++++    L +  + +D         ++E  
Sbjct: 87  SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ--ILEGV 144
Query: 320 DYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
            YLH  NI++ DLKP+N+LLS+    G +K+VDFG ++K+
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+L+      K L ++ E C            G+ D    + +   +++   + HSRN+
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++RDLKP+NLL++ +G +KL DFG A+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR 149

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 245 VETRQQQH---IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           ++ R+QQ    + +E  IM +   + +V++Y ++     L+++ME   GG L  I+    
Sbjct: 57  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT- 115
Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             ++         V++A   LH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 116 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 170

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           +++ I++E  +M E     IV    ++     L+++ME   GG L  ++ +    +    
Sbjct: 61  KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 120
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                C+ +A ++LHS  +I+R++K +N+LL   G VKL DFGF  ++
Sbjct: 121 AVCRECL-QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI 167

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 257 KEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRD--------KGNFDDA 306
           KEI   + C    IV  Y +F  K  L+++M+   GG +  I++          G  D++
Sbjct: 62  KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           T       V+E  +YLH    I+RD+K  N+LL   G V++ DFG +
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEH--------VDQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 257 KEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRD--------KGNFDDA 306
           KEI   + C    IV  Y +F  K  L+++M+   GG +  I++          G  D++
Sbjct: 57  KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           T       V+E  +YLH    I+RD+K  N+LL   G V++ DFG +
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           +Y  +  ++RR         ++ I  E  I+ E     ++ L++ +++K  + ++ E   
Sbjct: 38  QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVA 97
Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYV 345
           GGEL+  L +K +  +     +   ++    YLHS  I + DLKPEN++L         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 346 KLVDFGFAKKL 356
           K++DFG A K+
Sbjct: 158 KIIDFGLAHKI 168

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
           GV+ L+ D+++ N+L++     R + +DE  +R    +I+  R  +H             
Sbjct: 33  GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
             IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y H+ 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
            + +RDLK EN LL  S +  +K+  FG++K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
           GV+ L+ D+++ N+L++     R + +DE  +R    +I+  R  +H             
Sbjct: 33  GVARLMRDKQS-NELVAVKYIERGEKIDENVKR----EIINHRSLRH------------- 74
Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
             IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y H+ 
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 326 NIIYRDLKPENLLL--STSGYVKLVDFGFAK 354
            + +RDLK EN LL  S +  +K+  FG++K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKTFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         +  D   F DA+      
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         +  D   F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKPENLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP 159

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 105
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 105
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 57  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 108
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+L+S +  VK+VDFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI 166

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 57  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 108
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 101
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 102
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         + +D   F DA+      
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLHQDLKKFMDASALTGIP 100
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         +  D  +F DA+      
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKDFMDASALTGIP 103
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158

>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri Beta Holoenzyme Length = 381

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 23  LTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF 82
           LT+        +++G+ I+ QG  GD F+II++G   V  ++  + E   +  L   D+F
Sbjct: 265 LTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324
Query: 83  GEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
           GE AL  +  R A +VA  P  + C+ +D+  F +++    EI
Sbjct: 325 GEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEI 365

>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri Beta Holoenzyme Length = 381

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 54/225 (24%)
Query: 37  GDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTAN 96
           G+ +I+QG  GD F+++ +G+V V +        +++  + +G  FGE AL     R A 
Sbjct: 161 GETVIQQGNEGDNFYVVDQGEVDVYVNG------EWVTNISEGGSFGELALIYGTPRAAT 214
Query: 97  IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSL--------RL 148
           + A     +    ID++++ +++          +  T  +R++ EEF S         + 
Sbjct: 215 VKAKT--DLKLWGIDRDSYRRIL----------MGSTLRKRKMYEEFLSKVSILESLEKW 262
Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMN------------------ 190
             L V   L    F   E + + G+P   F +     + V+                   
Sbjct: 263 ERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSD 322
Query: 191 --------LDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 227
                   L+  R A +VA  P  + C+ +D+  F +++    EI
Sbjct: 323 YFGEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEI 365

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT----- 308
           + E  ++ E N   IVKL      +  LY++ E         +  D  +F DA+      
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFE--------FLSMDLKDFMDASALTGIP 104
Query: 309 ----RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
               + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYT 312
           + E +++ E +   I+ L   F  K  + ++ +  +  +L  I++D       +  + Y 
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
              ++  +YLH   I++RDLKP NLLL  +G +KL DFG AK    P
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 79  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 138
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 77  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 136
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 137 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 59  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 118
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 119 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 181
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+L+      K L ++ E C            G+ D    + +   +++   + HSRN+
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++RDLKP+NLL++ +G +KL +FG A+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR 149

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +      T   ++   YLHS N+I+RD+K  N+LLS 
Sbjct: 130 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 189
Query: 342 SGYVKLVDFGFA 353
            G VKL DFG A
Sbjct: 190 PGLVKLGDFGSA 201

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 55  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 114
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++   D+LHS  +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           +++ME CLG     +   K    +      T   ++   YLHS N+I+RD+K  N+LLS 
Sbjct: 91  WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 150
Query: 342 SGYVKLVDFGFA 353
            G VKL DFG A
Sbjct: 151 PGLVKLGDFGSA 162

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 55  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 114
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +   
Sbjct: 53  LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 112
Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++   D+LHS  +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++   D+LHS  +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD---- 299
           +++ + +   + E +++ + N   ++K Y +F +   L +++E    G+L  +++     
Sbjct: 70  LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 129
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           K    + T   Y   +  A +++HSR +++RD+KP N+ ++ +G VKL D G  +
Sbjct: 130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTACVVEAFDYLHS 324
           +V L+  F+D   + M+ E   GGEL+  + D+ N    D+A    Y   V +   ++H 
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 167
Query: 325 RNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
            N ++ DLKPEN++ +T  S  +KL+DFG    L
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 201

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTACVVEAFDYLHS 324
           +V L+  F+D   + M+ E   GGEL+  + D+ N    D+A    Y   V +   ++H 
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 273
Query: 325 RNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
            N ++ DLKPEN++ +T  S  +KL+DFG    L
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           +T +V    + RR+    E ++   +M    ++   +C +IV+ + TF     +++ ME 
Sbjct: 48  KTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME- 104
Query: 288 CLGGELWTIL--RDKGNFDDATTRFYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGY 344
            L G     L  R +G   +      T  +V+A  YL  ++ +I+RD+KP N+LL   G 
Sbjct: 105 -LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ 163
Query: 345 VKLVDFGFAKKLI 357
           +KL DFG + +L+
Sbjct: 164 IKLCDFGISGRLV 176

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 70  NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+++S +  VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 46/218 (21%)
Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           ++D R+I TL  G F ++ L +     ++ +ALK+ +KS +    D   +N         
Sbjct: 30  INDYRIIRTLNQGKFNKIILCE---KDNKFYALKKYEKSLLEKKRDFTKSN--------- 77
Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                     N  IS    I++KY D  +E     QI+   + ++ ++ + I+   +  +
Sbjct: 78  ----------NDKIS----IKSKYDDFKNEL----QIITDIKNEYCLTCEGIITNYDEVY 119
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEA----FDYLH 323
           I+          Y YM  +S L  + +  + DK N+          C++++    F Y+H
Sbjct: 120 II----------YEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIH 168
Query: 324 S-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           + +NI +RD+KP N+L+  +G VKL DFG ++ ++  +
Sbjct: 169 NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+++S +  VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+++S +  VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+++S +  VK++DFG A+ +
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I++L + F+D    Y++ E   GG +   ++ + +F++         V  A D+LH++ I
Sbjct: 73  ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGI 132
Query: 328 IYRDLKPENLLLSTS---GYVKLVDF 350
            +RDLKPEN+L  +      VK+ DF
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDF 158

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           N   IV +Y T + +       Y++ME   G  L  I+  +G           A   +A 
Sbjct: 87  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++ H   II+RD+KP N+++S +  VK++DFG A+ +
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 183

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGEL-WTILR--DKG-NFDDATTRFYTACVVEAFDYLH 323
           IV+L +T+     LYM+ E   G +L + I++  D G  + +A    Y   ++EA  Y H
Sbjct: 90  IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
             NII+RD+KP  +LL++   S  VKL  FG A +L
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +   D+LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +   D+LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +   D+LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +   D+LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGEL-WTILR--DKG-NFDDATTRFYTACVVEAFDYLH 323
           IV+L +T+     LYM+ E   G +L + I++  D G  + +A    Y   ++EA  Y H
Sbjct: 88  IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 324 SRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
             NII+RD+KP  +LL++   S  VKL  FG A +L
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 281 LYMLMESCLGGELWTILRD-KGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           L+++ME C  G +  ++++ KGN   +    +    ++    +LH   +I+RD+K +N+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 339 LSTSGYVKLVDFGFAKKL 356
           L+ +  VKLVDFG + +L
Sbjct: 162 LTENAEVKLVDFGVSAQL 179

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV +    ++    Y++ME   G  L   +   G     T   +T  +++   + H   I
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           ++RD+KP+N+L+ ++  +K+ DFG AK L
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKAL 161

>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +++G  I+ QG  GD FFII +G   V  ++  + E   +  L   D+FGE AL  +  R
Sbjct: 183 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPR 242
Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
            A +VA  P  + C+ +D+  F +++    +I
Sbjct: 243 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 272

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGE-LWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           +++L   F+ ++   +++E  L  + L+  + +KG   +  +R +   VV A  + HSR 
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG 159
Query: 327 IIYRDLKPENLLLST-SGYVKLVDFG 351
           +++RD+K EN+L+    G  KL+DFG
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFG 185

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEI--MGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           V+ +S++    + V+ +    ++ +KEI  +  A    I+ L+++F+  + L M+ E   
Sbjct: 25  VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84
Query: 290 GGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVK 346
           G +++  +       ++     Y   V EA  +LHS NI + D++PEN++  T  S  +K
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144
Query: 347 LVDFGFAKKL 356
           +++FG A++L
Sbjct: 145 IIEFGQARQL 154

>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp- Dependent Protein Kinase Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +++G  I+ QG  GD FFII +G   V  ++  + E   +  L   D+FGE AL  +  R
Sbjct: 181 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPR 240
Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
            A +VA  P  + C+ +D+  F +++    +I
Sbjct: 241 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 270

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
           +R    V +++Q+ ++ + +I M   +C F V  Y     +  +++   LM++ L  + +
Sbjct: 82  KRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD-KFY 140
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
             + DKG    +D   +   + +V+A ++LHS+ ++I+RD+KP N+L++  G VK+ DFG
Sbjct: 141 KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199
Query: 352 FAKKLI 357
            +  L+
Sbjct: 200 ISGYLV 205

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 232 VDETSERRRA-PQIVETRQQ--QHIMSEKEIMGEANCDFIVKLYK--------------T 274
           VD   ++R A  +IV T  Q  +H + E +I+   + D IVK+++              +
Sbjct: 31  VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
             +   +Y++ E  +  +L  +L ++G   +   R +   ++    Y+HS N+++RDLKP
Sbjct: 91  LTELNSVYIVQE-YMETDLANVL-EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKP 148
Query: 335 ENLLLSTSGYV-KLVDFGFAKKLIGPRYS 362
            NL ++T   V K+ DFG A +++ P YS
Sbjct: 149 ANLFINTEDLVLKIGDFGLA-RIMDPHYS 176

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
           +R    V +++Q+ ++ + +I M   +C F V  Y     +  +++   LM++ L  + +
Sbjct: 38  KRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD-KFY 96
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
             + DKG    +D   +   + +V+A ++LHS+ ++I+RD+KP N+L++  G VK+ DFG
Sbjct: 97  KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155
Query: 352 FAKKLI 357
            +  L+
Sbjct: 156 ISGYLV 161

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTS 163
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
           + RAPQ+ +E R  + + S          D I ++Y      KY  M++E  LG  L  +
Sbjct: 45  KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 94
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
             L D+  F   T       ++   +Y+HS+N+IYRD+KPEN L+   G      + ++D
Sbjct: 95  FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 153
Query: 350 FGFAKKLIGP 359
           FG AK+ I P
Sbjct: 154 FGLAKEYIDP 163

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +K    D+  + Y   ++    + H   I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +K    D+  + Y   ++    + H   I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 163
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174

>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 291

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +++G  I+ QG  GD FFII +G   V  ++  + E   +  L   D+FGE AL  +  +
Sbjct: 185 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPK 244
Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
            A +VA  P  + C+ +D+  F +++    +I
Sbjct: 245 AATVVARGP--LKCVKLDRPRFERVLGPCSDI 274

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 127 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 181
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 109 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 163
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 164 DLKICDFGLAR 174

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 161
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 112 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 166
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 167 DLKICDFGLAR 177

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 105 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 159
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 160 DLKICDFGLAR 170

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 115 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 169
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 170 DLKICDFGLAR 180

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 161
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           +++  +  +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 107 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 162 DLKICDFGLAR 172

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 105 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 159
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 160 DLKICDFGLAR 170

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 112 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 166
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 167 DLKICDFGLAR 177

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 113 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 167
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 168 DLKICDFGLAR 178

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 104 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 158
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 159 DLKICDFGLAR 169

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 111 LMET----DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           +++  +  +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----- 300
           E  Q+Q +M    +M  ++C +IV+ Y     +   ++ ME      L +   DK     
Sbjct: 61  EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME------LMSTSFDKFYKYV 114
Query: 301 -GNFDDATTR----FYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
               DD          T   V+A ++L     II+RD+KP N+LL  SG +KL DFG + 
Sbjct: 115 YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 355 KLI 357
           +L+
Sbjct: 175 QLV 177

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLIG 358
           + Y   ++ +  Y+HS  I +RD+KP+NLLL   SG +KL+DFG AK LI 
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
            ++  MSE  IM   +   IVKL    +++   +++ME    GEL   L R+K +    T
Sbjct: 68  NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 126
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              Y+  + +A  YL S N ++RD+   N+L+++   VKL DFG ++
Sbjct: 127 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 173

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
            Y++ E   GG + + +  + +F++         V  A D+LH++ I +RDLKPEN+L  
Sbjct: 86  FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 341 TSGY---VKLVDFGFAKKL 356
                  VK+ DFG    +
Sbjct: 146 HPNQVSPVKICDFGLGSGI 164

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           ++  K ++  SER+    IVE RQ          +   N   IVKLY    +   + ++M
Sbjct: 34  DVAIKQIESESERKAF--IVELRQ----------LSRVNHPNIVKLYGACLNP--VCLVM 79
Query: 286 ESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHS---RNIIYRDLKPENLLL 339
           E   GG L+ +L        +  A    +     +   YLHS   + +I+RDLKP NLLL
Sbjct: 80  EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
Query: 340 STSGYV-KLVDFGFA 353
              G V K+ DFG A
Sbjct: 140 VAGGTVLKICDFGTA 154

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           +++  +  +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 162 DLKIXDFGLAR 172

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 55  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 83  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 141
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 58  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 116
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
           ++  K ++  SER+    IVE RQ          +   N   IVKLY    +   + ++M
Sbjct: 33  DVAIKQIESESERKAF--IVELRQ----------LSRVNHPNIVKLYGACLNP--VCLVM 78
Query: 286 ESCLGGELWTILRDK---GNFDDATTRFYTACVVEAFDYLHS---RNIIYRDLKPENLLL 339
           E   GG L+ +L        +  A    +     +   YLHS   + +I+RDLKP NLLL
Sbjct: 79  EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138
Query: 340 STSGYV-KLVDFGFA 353
              G V K+ DFG A
Sbjct: 139 VAGGTVLKICDFGTA 153

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 279 KYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPEN 336
           K L++ ME C  G L  W   R     D          + +  DY+HS+ +I+RDLKP N
Sbjct: 107 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 337 LLLSTSGYVKLVDFGFAKKL 356
           + L  +  VK+ DFG    L
Sbjct: 167 IFLVDTKQVKIGDFGLVTSL 186

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
           Y  FK    +  LMES    +L  I+           R++   ++    Y+HS  +I+RD
Sbjct: 129 YGEFKSVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
           LKP NLL++ +  +K+ DFG A+ L
Sbjct: 185 LKPSNLLVNENCELKIGDFGMARGL 209

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
            ++  MSE  IM   +   IVKL    +++   +++ME    GEL   L R+K +    T
Sbjct: 52  NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 110
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              Y+  + +A  YL S N ++RD+   N+L+++   VKL DFG ++
Sbjct: 111 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 157

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 57  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 115
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGNFDDAT 307
            ++  MSE  IM   +   IVKL    +++   +++ME    GEL   L R+K +    T
Sbjct: 56  NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              Y+  + +A  YL S N ++RD+   N+L+++   VKL DFG ++
Sbjct: 115 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 161

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 60  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 118
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLLL+T+ 
Sbjct: 111 LMET----DLYKLLKCQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTC 165
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 166 DLKICDFGLAR 176

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           LME+    +L+ +L+ +   +D    F    ++    Y+HS N+++RDLKP NLL++T+ 
Sbjct: 127 LMET----DLYKLLKSQQLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLINTTC 181
Query: 344 YVKLVDFGFAK 354
            +K+ DFG A+
Sbjct: 182 DLKICDFGLAR 192

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 55  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 52  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 110
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S +  VKL DFG ++
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 55  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 283 MLMESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL 339
           + ME C GG+L   L    N     +   R   + +  A  YLH   II+RDLKPEN++L
Sbjct: 96  LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 340 STSG---YVKLVDFGFAKKL 356
                    K++D G+AK+L
Sbjct: 156 QPGPQRLIHKIIDLGYAKEL 175

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 283 MLMESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL 339
           + ME C GG+L   L    N     +   R   + +  A  YLH   II+RDLKPEN++L
Sbjct: 95  LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 340 STSG---YVKLVDFGFAKKL 356
                    K++D G+AK+L
Sbjct: 155 QPGPQRLIHKIIDLGYAKEL 174

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
           Y  FK    +  LMES    +L  I+           R++   ++    Y+HS  +I+RD
Sbjct: 128 YGEFKSVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
           LKP NLL++ +  +K+ DFG A+ L
Sbjct: 184 LKPSNLLVNENCELKIGDFGMARGL 208

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDATT 308
           ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A+ 
Sbjct: 55  REKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             Y   +  A  YL S+  ++RD+   N+L+S +  VKL DFG ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
           ++Q ++SE  ++ E     IV+ Y    D+    LY++ME C GG+L +++    +++  
Sbjct: 48  EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D+         +  A    H R+     +++RDLKP N+ L     VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
           ++Q ++SE  ++ E     IV+ Y    D+    LY++ME C GG+L +++    +++  
Sbjct: 48  EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D+         +  A    H R+     +++RDLKP N+ L     VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTIL----RDKGN 302
           ++Q ++SE  ++ E     IV+ Y    D+    LY++ME C GG+L +++    +++  
Sbjct: 48  EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 303 FDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D+         +  A    H R+     +++RDLKP N+ L     VKL DFG A+ L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVDFGFAKKLIGP 359
           ++   +Y+HS+N+IYRD+KPEN L+   G      + ++DFG AK+ I P
Sbjct: 106 LLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDP 155

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 278 KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC------VVEAFDYLHSRNIIYRD 331
           K YLY+ M+ C    L   +  + + +D   R +  C      + EA ++LHS+ +++RD
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLED---REHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
           LKP N+  +    VK+ DFG    +
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAM 214

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
           T   Q  + E  +M     D +V+LY     ++ +Y++ E    G L   L+        
Sbjct: 48  TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL 107
Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +   ++A + E   Y+  +N I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 108 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 157

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF-DDATTRFYTACVVEAFDYLHSRN 326
           IV L+     +K L ++ E  L  +L   L D GN  +    + +   ++    Y H + 
Sbjct: 62  IVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++  G +KL DFG A+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR 148

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 41  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 98
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 99  TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
           T   Q  + E  +M     D +V+LY     ++ +Y++ E    G L   L+        
Sbjct: 49  TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL 108
Query: 307 TTRF--YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             +   ++A + E   Y+  +N I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 109 LPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 158

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           +  ++E  +M     D +VKL+     K+ +Y++ E    G L   L+          + 
Sbjct: 55  EAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 113
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++A + E   ++  RN I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 159

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           +  ++E  +M     D +VKL+     K+ +Y++ E    G L   L+          + 
Sbjct: 222 EAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++A + E   ++  RN I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 281 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 45  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 102
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 103 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           +  ++E  +M     D +VKL+     K+ +Y++ E    G L   L+          + 
Sbjct: 228 EAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286
Query: 311 --YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++A + E   ++  RN I+RDL+  N+L+S S   K+ DFG A+
Sbjct: 287 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +    +++ K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   V    
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLV--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 46  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 103
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 46  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 103
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 104 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 52  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 109
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 110 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 61  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 118
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 164
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 165 ELKILDFGLARH 176

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +    +++ K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   V    
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLV--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 169 ELKILDFGLARH 180

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+ + +G +L  I++ +    D   +F    ++    Y+HS  II+RDLKP N+ ++   
Sbjct: 110 LVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
            ++++DFG A++
Sbjct: 169 ELRILDFGLARQ 180

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
           + RAPQ+ +E R  + + S          D I ++Y      KY  M++E  LG  L  +
Sbjct: 66  KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 115
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
             L D+  F   T       ++   +Y+HS+N+IYRD+KPEN L+   G      + ++D
Sbjct: 116 FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 174
Query: 350 FGFAKKLIGP 359
           F  AK+ I P
Sbjct: 175 FALAKEYIDP 184

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++ K I+G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             V     +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 MLV--GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 238 RRRAPQI-VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI 296
           + RAPQ+ +E R  + + S          D I ++Y      KY  M++E  LG  L  +
Sbjct: 45  KSRAPQLHLEYRFYKQLGS---------GDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDL 94
Query: 297 --LRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVD 349
             L D+  F   T       ++   +Y+HS+N+IYRD+KPEN L+   G      + ++D
Sbjct: 95  FDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIID 153
Query: 350 FGFAKKLIGP 359
           F  AK+ I P
Sbjct: 154 FALAKEYIDP 163

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YT 312
           + E  I+ + +   IV+L      K+ +Y++ME   GG+  T LR +G      T     
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
                  +YL S+  I+RDL   N L++    +K+ DFG +++
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 279 KYLYMLMESCLGGEL--WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPEN 336
           K L++ ME C  G L  W   R     D          + +  DY+HS+ +I RDLKP N
Sbjct: 93  KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 337 LLLSTSGYVKLVDFGFAKKL 356
           + L  +  VK+ DFG    L
Sbjct: 153 IFLVDTKQVKIGDFGLVTSL 172

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +++LY          +   + LG  L  + + +G+F   T   Y   V E   YL S+  
Sbjct: 83  LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           I+RDL   NLLL+T   VK+ DFG  + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YT 312
           + E  I+ + +   IV+L      K+ +Y++ME   GG+  T LR +G      T     
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
                  +YL S+  I+RDL   N L++    +K+ DFG +++
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +++LY          +   + LG  L  + + +G+F   T   Y   V E   YL S+  
Sbjct: 77  LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           I+RDL   NLLL+T   VK+ DFG  + L
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRAL 165

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 173
Query: 344 YVKLVDFGFAK 354
            +K++DFG A+
Sbjct: 174 ELKILDFGLAR 184

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           LG  L  + + +G+F   T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ 
Sbjct: 98  LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 349 DFGFAKKL 356
           DFG  + L
Sbjct: 158 DFGLMRAL 165

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 168 ELKILDFGLARH 179

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +++LY          +   + LG  L  + + +G+F   T   Y   V E   YL S+  
Sbjct: 83  LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           I+RDL   NLLL+T   VK+ DFG  + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG  + 
Sbjct: 163 ELKILDFGLCRH 174

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 168 ELKILDFGLARH 179

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           LG  L  + + +G+F   T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ 
Sbjct: 94  LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
           DFG  + L
Sbjct: 154 DFGLMRAL 161

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 194 LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHI 253
           L+  N++ AD E + C       F  +   +  +R K +D   +  +  Q  E    + +
Sbjct: 6   LKRDNLLIADIE-LGC-----GNFGSVRQGVYRMRKKQIDVAIKVLK--QGTEKADTEEM 57
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RDKGNFDDATTRF 310
           M E +IM + +  +IV+L    + +  L ++ME   GG L   L   R++    +     
Sbjct: 58  MREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 116
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   V     YL  +N ++RDL   N+LL    Y K+ DFG +K L
Sbjct: 117 HQ--VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           LG  L  + + +G+F   T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ 
Sbjct: 94  LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
           DFG  + L
Sbjct: 154 DFGLMRAL 161

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
           LG  L  + + +G+F   T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ 
Sbjct: 94  LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 349 DFGFAKKL 356
           DFG  + L
Sbjct: 154 DFGLMRAL 161

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 165 ELKILDFGLARH 176

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           R  + IM   E+ G  N   ++ + +   D+  +Y++ +  +  +L  ++R   N  +  
Sbjct: 54  RTFREIMILTELSGHENIVNLLNVLRADNDRD-VYLVFDY-METDLHAVIR--ANILEPV 109
Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
            + Y    +++   YLHS  +++RD+KP N+LL+   +VK+ DFG ++  +  R
Sbjct: 110 HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 165 ELKILDFGLARH 176

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 170 ELKILDFGLARH 181

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 170 ELKILDFGLARH 181

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 170 ELKILDFGLARH 181

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 169 ELKILDFGLARH 180

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 183 ELKILDFGLARH 194

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 268 IVKLYKTFKDKKYLYMLMESCLGG-ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN 326
           I+K+   F+++ +  ++ME    G +L+  +      D+    +    +V A  YL  ++
Sbjct: 91  IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           II+RD+K EN++++    +KL+DFG A  L
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 170 ELKILDFGLARH 181

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 168 ELKILDFGLARH 179

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 161
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 162 ELKILDFGLARH 173

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 173
Query: 344 YVKLVDFGFAK 354
            +K++DFG A+
Sbjct: 174 ELKILDFGLAR 184

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 186 ELKILDFGLARH 197

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 169 ELKILDFGLARH 180

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 183 ELKILDFGLARH 194

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 182 ELKILDFGLARH 193

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 175 ELKILDFGLARH 186

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAK 354
            +K++DFG A+
Sbjct: 175 ELKILDFGLAR 185

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 175 ELKILDFGLARH 186

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 182 ELKILDFGLARH 193

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 169 ELKILDFGLARH 180

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 172
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 173 ELKILDFGLARH 184

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 165 ELKILDFGLARH 176

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 183 ELKILDFGLARH 194

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y+++E    G L   LR+    + 
Sbjct: 54  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 186 ELKILDFGLARH 197

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 168 ELKILDFGLARH 179

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 160 ELKILDFGLARH 171

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
            Y++ E   GG + + +  + +F++         V  A D+LH++ I +RDLKPEN+L  
Sbjct: 86  FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 341 TSGYVKLV-----DFGFAKKLIG 358
               V  V     D G   KL G
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNG 168

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 159 ELKILDFGLARH 170

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 191
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 192 ELKILDFGLARH 203

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 160 ELKILDFGLARH 171

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 163 ELKILDFGLARH 174

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 254 MSEKEIMGEANC------DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           MSE E + EA        + +V+LY     ++ ++++ E    G L   LR+ +  F   
Sbjct: 61  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-- 118
Query: 307 TTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           T +    C  V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 159 ELKILDFGLARH 170

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDD-HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 159 ELKILDFGLARH 170

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 160
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 161 ELKILDFGLARH 172

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 279 KYLYMLME---SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
           KYL ++ME     L   L + +R   +        Y   +  A  ++HS  I +RD+KP+
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 336 NLLL-STSGYVKLVDFGFAKKLI 357
           NLL+ S    +KL DFG AKKLI
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLI 193

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y+++E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 50  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 109
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
           + + +MSE +I+     + + +  L    K    L +++E C  G L T LR K N    
Sbjct: 73  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 303 ----FDDATTRFYTAC----VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
               + D  T  +  C    V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 355 KL 356
            +
Sbjct: 193 DI 194

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y+++E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
           VI + +F Q++ + D    ++V      +E    R+A +  E R  +H+  + +     N
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
              ++ + + F  + ++ M  E  L   L+ +++      F     R +   +++  D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
           H   II+ DLKPEN+LL   G   +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+ + +G +L  I++ +    D   +F    ++    Y+HS  II+RDLKP N+ ++   
Sbjct: 110 LVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 344 YVKLVDFGFAKK 355
            ++++DFG A++
Sbjct: 169 ELRILDFGLARQ 180

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
           VI + +F Q++ + D    ++V      +E    R+A +  E R  +H+  + +     N
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
              ++ + + F  + ++ M  E  L   L+ +++      F     R +   +++  D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
           H   II+ DLKPEN+LL   G   +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247

>pdb|3CF6|E Chain E, Structure Of Epac2 In Complex With Cyclic-Amp And Rap Length = 694

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 25  IVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE 84
           ++ F S    K G  +  QG  G +++II KG V V +       +  + TL++GD FG+
Sbjct: 54  VLIFESHA--KGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGK 106
Query: 85  KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
            AL  D  R A+IV  + +    L +D+E FN+++  ++   +R K  D+
Sbjct: 107 LALVNDAPRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 155

>pdb|2BYV|E Chain E, Structure Of The Camp Responsive Exchange Factor Epac2 In Its Auto-Inhibited State Length = 999

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           ++  K G  +  QG  G +++II KG V V +       +  + TL++GD FG+ AL  D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
             R A+IV  + +    L +D+E FN+++  ++   +R K  D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 51  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 54  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172

>pdb|1O7F|A Chain A, Crystal Structure Of The Regulatory Domain Of Epac2 Length = 469

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           ++  K G  +  QG  G +++II KG V V +       +  + TL++GD FG+ AL  D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
             R A+IV  + +    L +D+E FN+++  ++   +R K  D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 51  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDATTRFYT 312
           +   E +G+  C   V+L + +++   LY+  E C G  L       G +  +A    Y 
Sbjct: 107 VGSHEKVGQHPC--CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYL 163
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              + A  +LHS+ +++ D+KP N+ L   G  KL DFG   +L
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 35/115 (30%)
Query: 268 IVKLYKTFKDKKYLYMLMESC---------------LGGELWTILRDKGNFDDATTRFYT 312
           +++ + T KD+++ Y+ +E C               LG E  T+L+              
Sbjct: 80  VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ------------- 126
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVK--LVDFGFAKKLIGPRYS 362
                   +LHS NI++RDLKP N+L+S     G +K  + DFG  KKL   R+S
Sbjct: 127 --TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 51  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 110
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 53  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 113 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 54  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN-FDDATTRF 310
           M E E++ + N   IVKL+   ++   ++  ++ME C  G L+T+L +  N +    + F
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 311 YTAC--VVEAFDYLHSRNIIYRDLKPENLL--LSTSG--YVKLVDFGFAKKL 356
                 VV   ++L    I++R++KP N++  +   G    KL DFG A++L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 62  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 121
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 122 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++      D   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 100 LVTHLMGADLNNIVK-CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 344 YVKLVDFGFAKK 355
            +K++DFG A+ 
Sbjct: 159 ELKILDFGLARH 170

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
           Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G      D 
Sbjct: 50  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +F +  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+
Sbjct: 110 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 157

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
           Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G      D 
Sbjct: 59  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +F +  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+
Sbjct: 119 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
           Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G      D 
Sbjct: 44  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +F +  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+
Sbjct: 104 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 278 KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC------VVEAFDYLHSRNIIYRD 331
           K YLY+ M+ C    L   +  +   ++   R  + C      + EA ++LHS+ +++RD
Sbjct: 87  KVYLYIQMQLCRKENLKDWMNGRCTIEE---RERSVCLHIFLQIAEAVEFLHSKGLMHRD 143
Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
           LKP N+  +    VK+ DFG    +
Sbjct: 144 LKPSNIFFTMDDVVKVGDFGLVTAM 168

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +    +++ K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMK----VVNHKNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y        
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLC--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 256 EKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL--RDKGN----FDDATTR 309
           E  +M E   + IV+LY     +  L ++ E  +  +L   +  R  GN     +    +
Sbjct: 53  EISLMKELKHENIVRLYDVIHTENKLTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++   +++   + H   I++RDLKP+NLL++  G +KL DFG A+
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 251 QHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKGNF---DDA 306
           Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G      D 
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +F +  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+
Sbjct: 291 LLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++D+G A+ 
Sbjct: 163 ELKILDYGLARH 174

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL---RD 299
           Q  E    + +M E +IM + +  +IV+L    + +  L ++ME   GG L   L   R+
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE 431
Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +    +     +   V     YL  +N ++R+L   N+LL    Y K+ DFG +K L
Sbjct: 432 EIPVSNVAELLHQ--VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTSG-----YVKLVDFGFAKKLIGP 359
           ++   +Y+H++++IYRD+KPEN L+   G      + ++DFG AK+ I P
Sbjct: 109 LITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 158

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 54  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 114 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 281 LYMLMESCLGGELWTILRDKGN-----------FDDATTRFYTAC----VVEAFDYLHSR 325
           L +++E C  G L T LR K N           + D  T  +  C    V +  ++L SR
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDI 198

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y+++E    G L   LR+    + 
Sbjct: 50  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 109
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 164

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN-FDDATTRF 310
           M E E++ + N   IVKL+   ++   ++  ++ME C  G L+T+L +  N +    + F
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 311 YTAC--VVEAFDYLHSRNIIYRDLKPENLL--LSTSG--YVKLVDFGFAKKL 356
                 VV   ++L    I++R++KP N++  +   G    KL DFG A++L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 211 VIDQETFNQLISSLDEIRTKYV------DETSERRRAPQIVETRQQQHIMSEKEIMGEAN 264
           VI +  F Q++ + D    ++V      +E    R+A +  E R  +H+  + +     N
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE--EIRILEHLRKQDK----DN 157
Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRFYTACVVEAFDYL 322
              ++ + + F  + ++ M  E  L   L+ +++      F     R +   +++  D L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 323 HSRNIIYRDLKPENLLLSTSGY--VKLVDFG 351
           H   II+ DLKPEN+LL   G   +K++DFG
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 108
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L +++E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 98  LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 283 MLMESCLGG--ELWTILRDKGNF--DDATTRFYTACVVEAFDYLHSRN--IIYRDLKPEN 336
           +L E C G   E    +  +G    D     FY  C   A  ++H +   II+RDLK EN
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC--RAVQHMHRQKPPIIHRDLKVEN 168
Query: 337 LLLSTSGYVKLVDFGFAKKLIG-PRYS 362
           LLLS  G +KL DFG A  +   P YS
Sbjct: 169 LLLSNQGTIKLCDFGSATTISHYPDYS 195

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
           + + +MSE +I+     + + +  L    K    L +++E C  G L T LR K N    
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 303 --------FDDATTRFYTAC----VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
                   + D  T  +  C    V +  ++L SR  I+RDL   N+LLS    VK+ DF
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 229
Query: 351 GFAKKL 356
           G A+ +
Sbjct: 230 GLARDI 235

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
           L+  +  K  L ++ + C G  L+  L        + T+F    +++         DYLH
Sbjct: 84  LFMGYSTKPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 137
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           +++II+RDLK  N+ L     VK+ DFG A
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L +++E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
           + + +MSE +I+     + + +  L    K    L +++E C  G L T LR K N    
Sbjct: 73  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 303 FDDATTRF--------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           + D    F        Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 355 KL 356
            +
Sbjct: 193 DI 194

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+ + +G +L  I++ +    D   +F    ++    Y+HS  II+RDLKP N+ ++   
Sbjct: 102 LVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 160
Query: 344 YVKLVDFGFAKK 355
            ++++DFG A++
Sbjct: 161 ELRILDFGLARQ 172

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L +++E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
           L+  +  K  L ++ + C G  L+  L        + T+F    +++         DYLH
Sbjct: 72  LFMGYSTKPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 125
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           +++II+RDLK  N+ L     VK+ DFG A
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L +++E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 198

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 475
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L +++E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 200

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 476
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y+++E    G L   LR+    + 
Sbjct: 47  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 161

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y        
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQMLC--GI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 268 IVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
           I+KL  T KD        ++  + +    +L+ IL D   FD    RFY   +++A DY 
Sbjct: 95  IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD---FD---IRFYMYELLKALDYC 148
Query: 323 HSRNIIYRDLKPENLLL-STSGYVKLVDFGFAK 354
           HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 181

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L ++ E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 98  LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L ++ E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 98  LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 281 LYMLMESCLGGELWTILRDKGN------------FDDATTRFYTAC----VVEAFDYLHS 324
           L ++ E C  G L T LR K N            + D  T  +  C    V +  ++L S
Sbjct: 98  LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           R  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDI 189

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 239 RRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYM---LMESCLGGELW 294
           +R    V +++Q+ ++ + +I     +C F V  Y     +  +++   L ++ L  + +
Sbjct: 65  KRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLD-KFY 123
Query: 295 TILRDKGNF--DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFG 351
             + DKG    +D   +   + +V+A ++LHS+ ++I+RD+KP N+L++  G VK  DFG
Sbjct: 124 KQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG 182
Query: 352 FAKKLI 357
            +  L+
Sbjct: 183 ISGYLV 188

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 268 IVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
           I+KL  T KD        ++  + +    +L+ IL D   FD    RFY   +++A DY 
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD---FD---IRFYMYELLKALDYC 153
Query: 323 HSRNIIYRDLKPENLLL-STSGYVKLVDFGFAK 354
           HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 186

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 295 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +A    Y A  +  A +YL  +N I+R+L   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 355 NAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---- 303
           +++ +MSE +IM      + IV L         + ++ E C  G+L   LR K       
Sbjct: 92  EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 304 -------DDATTR---FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
                    A+TR    +++ V +   +L S+N I+RD+   N+LL+     K+ DFG A
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 354 KKLI 357
           + ++
Sbjct: 212 RDIM 215

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 54  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 113
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           +A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+L+      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE 180

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           D   +++    + A   LH  N+I+RDLKP NLL++++  +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 34  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 87
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 88  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 141
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           D   +++    + A   LH  N+I+RDLKP NLL++++  +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           D   +++    + A   LH  N+I+RDLKP NLL++++  +K+ DFG A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 33  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 86
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 87  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 140
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 282 YMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS 340
           Y++ME  +GG+  ++ R KG     A    Y   ++ A  YLHS  ++Y DLKPEN++L 
Sbjct: 160 YIVME-YVGGQ--SLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML- 215
Query: 341 TSGYVKLVDFGFAKKL 356
           T   +KL+D G   ++
Sbjct: 216 TEEQLKLIDLGAVSRI 231

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD 305
           +++ +MSE +IM      + IV L         + ++ E C  G+L   LR K   + D 
Sbjct: 92  EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 306 ATTR--------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
              R         +++ V +   +L S+N I+RD+   N+LL+     K+ DFG A+ ++
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFDD 305
           +++ +MSE +IM      + IV L         + ++ E C  G+L   LR K   + D 
Sbjct: 84  EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 306 ATTR--------FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
              R         +++ V +   +L S+N I+RD+   N+LL+     K+ DFG A+ ++
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 37  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 90
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 91  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 144
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
           E +IM + +   IV+L   F      KD+ YL ++++  +   ++ + R     K     
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPATVYRVARHYSRAKQTLPV 121
Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
              + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 202

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 47  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 161

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 47  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 106
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  ++
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT 165

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 115 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 357 I 357
           +
Sbjct: 175 V 175

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 357 I 357
           +
Sbjct: 186 V 186

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 75  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 75  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 26  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 79
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 80  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLCQVIQMELDHERMSYLLYQ--MLCGI 133
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 118 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
Query: 357 I 357
           +
Sbjct: 178 V 178

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 357 I 357
           +
Sbjct: 174 V 174

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++ FG A+ 
Sbjct: 163 ELKILGFGLARH 174

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 73  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 131
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 133 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 357 I 357
           +
Sbjct: 193 V 193

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 256 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 315
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+R+L   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 316 SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI 357
           + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 65  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 123
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
           R K        + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L
Sbjct: 127 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 357 I 357
           +
Sbjct: 187 V 187

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 249 QQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
           + + +MSE +I+     + + +  L    K    L +++E C  G L T LR K N    
Sbjct: 75  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 303 ------FDDATTR----FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
                 + D  T      Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG 
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 353 AKKL 356
           A+ +
Sbjct: 195 ARDI 198

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 59  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 69  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 128 --MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
                   +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 MLC--GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D      +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +G  N     K  + F+D   +Y++ME  +   L  +++ + + +  +   Y   ++   
Sbjct: 86  IGLLNVFTPQKSLEEFQD---VYIVME-LMDANLSQVIQMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 53  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 111
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 135 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 185

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 59  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +++E  +M + +  +IV++    + + ++ ++ME    G L   L+   +  D       
Sbjct: 55  LLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELV 113
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 226 EIRTKYVDETSERRRAPQIVET-------RQQQHIMSEKEIMGEANCDFIVKLYKTFKDK 278
           E+    +  +S ++  P  ++T       +Q+   + E  IMG+ +   I++L       
Sbjct: 59  EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 279 KYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
           K + ++ E    G L   LR+K G F           +     YL + N ++RDL   N+
Sbjct: 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNI 178
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L++++   K+ DFG ++ L
Sbjct: 179 LVNSNLVCKVSDFGLSRVL 197

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-VKLVDFGFAK 354
           D   RFY   +++A DY HS  I++RD+KP N+++      ++L+D+G A+
Sbjct: 128 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++D G A+ 
Sbjct: 163 ELKILDAGLARH 174

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD- 304
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   LR+    + 
Sbjct: 68  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV 127
Query: 305 DATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            A    Y A  +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 128 TAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D  T   +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 30  IGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH----KNI 83
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +   N     K  + F+D   +Y++ME  +   L  ++  + + +  +   Y   ++   
Sbjct: 84  ISLLNVFTPQKTLEEFQD---VYLVME-LMDANLCQVIHMELDHERMSYLLYQ--MLCGI 137
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           +++ +MSE +IM      + IV L         + ++ E C  G+L   LR K    +  
Sbjct: 92  EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 308 TRF--------------YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
             F              +++ V +   +L S+N I+RD+   N+LL+     K+ DFG A
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 354 KKLI 357
           + ++
Sbjct: 212 RDIM 215

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +  DYLH++NII+RD+K  N+ L     VK+ DFG A
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + E  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 200 VAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI 259
           + +  +G+ C   D  T   +  ++ ++   + ++T  +R   ++V  +   H    K I
Sbjct: 32  IGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH----KNI 85
Query: 260 MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAF 319
           +   N     K  + F+D   +Y++ME  +   L  ++  + + +  +   Y   ++   
Sbjct: 86  ISLLNVFTPQKTLEEFQD---VYLVME-LMDANLCQVIHMELDHERMSYLLYQ--MLCGI 139
Query: 320 DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of Pka Length = 246

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
            Y+ G+ IIR+G +G+ F++I  G V V+ K      +  I  L   D+FGE AL  D  
Sbjct: 152 IYQPGETIIREGDQGENFYLIEYGAVDVSKKG-----QGVINKLKDHDYFGEVALLNDLP 206
Query: 93  RTANIVAADPEGVSCL 108
           R A + A     V+ L
Sbjct: 207 RQATVTATKRTKVATL 222

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 271 LYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVE-------AFDYLH 323
           L+  +     L ++ + C G  L+  L        + T+F    +++         DYLH
Sbjct: 84  LFMGYSTAPQLAIVTQWCEGSSLYHHLHA------SETKFEMKKLIDIARQTARGMDYLH 137
Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           +++II+RDLK  N+ L     VK+ DFG A
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++DF  A+ 
Sbjct: 163 ELKILDFYLARH 174

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++D G A+ 
Sbjct: 163 ELKILDRGLARH 174

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           L+   +G +L  I++ +   DD   +F    ++    Y+HS +II+RDLKP NL ++   
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 344 YVKLVDFGFAKK 355
            +K++D G A+ 
Sbjct: 163 ELKILDGGLARH 174

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 172
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 173 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL- 289
           ++ E  + +    I+E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 70  WIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 122
Query: 290 ------------GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
                       G  L  +   K N        +   + +  +YL  R +++RDL   N+
Sbjct: 123 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 182
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 183 LVKTPQHVKITDFGLAKLL 201

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 76  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 134
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 135 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 77  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 135
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 136 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 75  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 133
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 134 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 77  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 135
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 136 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 39  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 91
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 92  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 152 LVKTPQHVKITDFGLAKLL 170

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 43  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 95
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 96  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 156 LVKTPQHVKITDFGLAKLL 174

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 69  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 127
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 128 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 172
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 173 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 70  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 128
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 129 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 40  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 92
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 93  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 153 LVKTPQHVKITDFGLAKLL 171

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 38  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 91  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGLAKLL 169

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 37  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 89
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 90  STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 150 LVKTPQHVKITDFGLAKLL 168

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 259 IMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +M   N   I+ L   F  +K L      Y++ME  +   L  +++ + + +  +   Y 
Sbjct: 70  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQMELDHERMSYLLYQ 128
Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
             ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 129 --MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 93  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLA 178

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 37  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 89
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 90  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 150 LVKTPQHVKITDFGLAKLL 168

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 94  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 36  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 88
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 89  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 149 LVKTPQHVKITDFGLAKLL 167

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 86  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA 171

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 94  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|4F7Z|A Chain A, Conformational Dynamics Of Exchange Protein Directly Activated By Camp Length = 999

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           ++  K G  +  QG  G +++II KG V V +       +  + TL++GD FG+ AL  D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417
Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE--IRTKYVDE 132
             R A+IV  + +    L +D+E  N+++  ++   +R K  D+
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDGNRILRDVEANTVRLKEHDQ 460

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 68  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLA 153

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 64  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 123 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 71  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 66  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 62  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
           RQ++  +SE  IMG+     I++L     +   + +L E    G L + LR + G F   
Sbjct: 59  RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 118
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL   + ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 168

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 71  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
           ++   +Y+HS+N I+RD+KP+N L+        V ++DFG AKK
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
           ++   +Y+HS+N I+RD+KP+N L+        V ++DFG AKK
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKK 355
           ++   +Y+HS+N I+RD+KP+N L+        V ++DFG AKK
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + L+  +  K  L ++ + C G  L+  L   +  F+            +  DYLH+++I
Sbjct: 66  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
           I+RDLK  N+ L     VK+ DFG A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 66  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 167

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 36  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 88
Query: 291 ------------GELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
                       G L   +R+ K N        +   + +  +YL  R +++RDL   N+
Sbjct: 89  STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 149 LVKTPQHVKITDFGLAKLL 167

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 273 KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDL 332
           +T  D    Y++M   +G +L  +++ +   +D   +F    +++   Y+H+  II+RDL
Sbjct: 97  ETLDDFTDFYLVM-PFMGTDLGKLMKHEKLGED-RIQFLVYQMLKGLRYIHAAGIIHRDL 154
Query: 333 KPENLLLSTSGYVKLVDFGFAKK 355
           KP NL ++    +K++DFG A++
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQ 177

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 65  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 123
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 124 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKY-----LYMLMESCLGGELWTILRDKGNFDDAT 307
           I+ E  I+   N D +VK+      K       LY+++E     +   + R      +  
Sbjct: 99  ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELH 157
Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            +     ++    Y+HS  I++RDLKP N L++    VK+ DFG A+ +  P
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 62  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 51  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 109
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 110 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 152

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 58  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 116
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 117 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 145 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 195

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 61  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 119
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 120 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 162

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA 306
           RQ++  +SE  IMG+     I++L     +   + +L E    G L + LR + G F   
Sbjct: 57  RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 116
Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL   + ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 166

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAK 354
           D   R+Y   +++A DY HS+ I++RD+KP N+++      ++L+D+G A+
Sbjct: 126 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 176

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 57  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 115
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 116 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF--Y 311
           ++E  +M +     +V+LY     +  +Y++ E    G L   L+          +    
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V    ++L SR  I+RDL   N+LLS +  VK+ DFG A+ +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 316 VEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            +  DYLH+++II+RDLK  N+ L     VK+ DFG A
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 280 YLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLL 338
           +L ++   C G  L++++RD K   D   TR     +V+   YLH++ I+++DLK +N+ 
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF 162
Query: 339 LSTSGYVKLVDFGF 352
              +G V + DFG 
Sbjct: 163 YD-NGKVVITDFGL 175

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 38  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 96
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 97  SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 156
Query: 351 GFAKKL 356
           G  K L
Sbjct: 157 GLTKVL 162

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF-YTACVVEAFDYLHSRNIIYRDLK 333
           +KDK+ L  + E   GG L  I++   +    + R  +   +     YLHS NII+RDL 
Sbjct: 77  YKDKR-LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 334 PENLLLSTSGYVKLVDFGFAKKLI 357
             N L+  +  V + DFG A+ ++
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMV 159

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 40  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 99  SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
           G  K L
Sbjct: 159 GLTKVL 164

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 47  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 105
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 106 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 165
Query: 351 GFAKKL 356
           G  K L
Sbjct: 166 GLTKVL 171

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 40  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 99  SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
           G  K L
Sbjct: 159 GLTKVL 164

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 58  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 116
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 351 GFAKKL 356
           G  K L
Sbjct: 177 GLTKVL 182

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 39  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 97
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 98  SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 157
Query: 351 GFAKKL 356
           G  K L
Sbjct: 158 GLTKVL 163

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 44  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 102
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 162
Query: 351 GFAKKL 356
           G  K L
Sbjct: 163 GLTKVL 168

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 58  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 116
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 351 GFAKKL 356
           G  K L
Sbjct: 177 GLTKVL 182

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 43  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 101
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 102 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 351 GFAKKL 356
           G  K L
Sbjct: 162 GLTKVL 167

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 46  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 104
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 105 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 164
Query: 351 GFAKKL 356
           G  K L
Sbjct: 165 GLTKVL 170

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 71  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 129
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 351 GFAKKL 356
           G  K L
Sbjct: 190 GLTKVL 195

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           F +   ++    +++   Y+HS  +++RDLKP NL ++    +K++DFG A+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 40  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 98
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 99  SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 351 GFAKKL 356
           G  K L
Sbjct: 159 GLTKVL 164

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 45  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYG 103
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 104 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 163
Query: 351 GFAKKL 356
           G  K L
Sbjct: 164 GLTKVL 169

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 243 QIVETRQQQHIMSEK--------EIMGEANCDFIVKLYKTF---KDKKYLYMLMESCLGG 291
           ++V  ++ QH   E         EI+     D IVK YK       ++ L ++ME    G
Sbjct: 43  EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEFLPYG 101
Query: 292 ELWTIL-RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
            L   L + K   D      YT+ + +  +YL ++  I+RDL   N+L+     VK+ DF
Sbjct: 102 SLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 351 GFAKKL 356
           G  K L
Sbjct: 162 GLTKVL 167

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 38  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 91  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGRAKLL 169

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           F +   ++    +++   Y+HS  +++RDLKP NL ++    +K++DFG A+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 38  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 90
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 91  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 151 LVKTPQHVKITDFGRAKLL 169

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           ++ E  + +    I E R+     + KEI+ EA     V       D  ++  L+  CL 
Sbjct: 40  WIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICLT 92
Query: 291 GELWTILR-------------DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENL 337
             +  I++              K N        +   + +  +YL  R +++RDL   N+
Sbjct: 93  STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 338 LLSTSGYVKLVDFGFAKKL 356
           L+ T  +VK+ DFG AK L
Sbjct: 153 LVKTPQHVKITDFGRAKLL 171

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 315 VVEAFDYLHSRNIIYRDLKPENLLLSTS-----GYVKLVDFGFAK 354
           ++   ++ HSR  ++RDLKP+NLLLS S       +K+ DFG A+
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFY 311
           + E  IM       IV           L ++ E    G L+ +L   G  +  D   R  
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 312 TAC-VVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            A  V +  +YLH+RN  I++RDLK  NLL+     VK+ DFG ++
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	362
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-63
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-52
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-52
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-45
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-44
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-43
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-42
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-41
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-40
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-40
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-40
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-39
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-39
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-37
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-37
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-36
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-36
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-36
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-36
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-35
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-35
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-35
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-34
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-34
3shr_A	299	CGMP-dependent protein kinase 1; cyclic nucleotide	9e-33
3shr_A	299	CGMP-dependent protein kinase 1; cyclic nucleotide	5e-26
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-32
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-31
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-31
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-31
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-30
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-30
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-27
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-27
2qcs_B	291	CAMP-dependent protein kinase type I-alpha regula	3e-27
2qcs_B	291	CAMP-dependent protein kinase type I-alpha regula	5e-21
4din_B	381	CAMP-dependent protein kinase type I-beta regulat	3e-27
4din_B	381	CAMP-dependent protein kinase type I-beta regulat	7e-21
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-27
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-27
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-27
1vp6_A	138	CNBD, cyclic-nucleotide binding domain of mesorhiz	2e-26
1vp6_A	138	CNBD, cyclic-nucleotide binding domain of mesorhiz	8e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-26
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-26
3gyd_A	187	CNMP-BD protein, cyclic nucleotide-binding domain;	7e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-26
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-25
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-25
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-25
3of1_A	246	CAMP-dependent protein kinase regulatory subunit;	2e-25
3of1_A	246	CAMP-dependent protein kinase regulatory subunit;	6e-22
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-25
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-25
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-25
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-25
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-25
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-25
3tnp_B	416	CAMP-dependent protein kinase type II-beta regula	7e-25
3tnp_B	416	CAMP-dependent protein kinase type II-beta regula	7e-24
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-24
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-24
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-24
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-24
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-24
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-24
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-24
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-24
3idb_B	161	CAMP-dependent protein kinase type II-beta regulat	7e-24
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-24
2d93_A	134	RAP guanine nucleotide exchange factor 6; CNMP_bin	8e-24
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-24
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-24
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-24
1o7f_A	469	CAMP-dependent RAP1 guanine-nucleotide exchange fa	1e-23
1o7f_A	469	CAMP-dependent RAP1 guanine-nucleotide exchange fa	3e-16
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-23
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-23
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-23
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-23
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-23
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-23
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-23
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-23
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-23
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-23
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-22
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-22
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-22
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-22
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-22
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	9e-22
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-21
3pna_A	154	CAMP-dependent protein kinase type I-alpha regula	5e-21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	6e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	7e-21
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-21
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	9e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-20
3mdp_A	142	Cyclic nucleotide-binding domain (CNMP-BD) protei;	1e-20
3ocp_A	139	PRKG1 protein; serine/threonine kinase, TF2I and I	2e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-20
2pqq_A	149	Putative transcriptional regulator; APC7345, strep	2e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-20
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-20
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-20
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-20
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-19
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-19
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-19
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-19
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-18
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-18
1wgp_A	137	Probable cyclic nucleotide-gated ION channel 6; cy	4e-18
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-18
2z69_A	154	DNR protein; beta barrel, dimerization helix, tran	7e-18
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-17
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-17
3d0s_A	227	Transcriptional regulatory protein; CAMP receptor	2e-17
4ev0_A	216	Transcription regulator, CRP family; CAMP binding,	3e-17
2bgc_A	238	PRFA; bacterial infection, human pathogen, transcr	4e-17
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-17
3la7_A	243	Global nitrogen regulator; activator, DNA-binding,	2e-16
3kcc_A	260	Catabolite gene activator; helix-turn-helix, CAMP,	2e-16
1zyb_A	232	Transcription regulator, CRP family; NP_813211.1,	2e-16
3ryp_A	210	Catabolite gene activator; CAMP receptor protein (	2e-16
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-16
3dkw_A	227	DNR protein; CRP-FNR, HTH, beta barrel, dimerizati	3e-16
3e6c_C	250	CPRK, cyclic nucleotide-binding protein; CPRK, hal	3e-16
3fx3_A	237	Cyclic nucleotide-binding protein; helix_TURN_heli	3e-16
3e97_A	231	Transcriptional regulator, CRP/FNR family; YP_6044	6e-16
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-15
2gau_A	232	Transcriptional regulator, CRP/FNR family; structu	1e-15
2oz6_A	207	Virulence factor regulator; winged helix, helix-tu	2e-15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-15
1o5l_A	213	Transcriptional regulator, CRP family; TM1171, str	4e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-15
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-15
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-14
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-14
2fmy_A	220	COOA, carbon monoxide oxidation system transcripti	2e-14
4ava_A	333	Lysine acetyltransferase; allosteric regulation, d	2e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-14
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-14
1ft9_A	222	Carbon monoxide oxidation system transcription reg	4e-14
2ptm_A	198	Hyperpolarization-activated (IH) channel; ION chan	5e-14
3bpz_A	202	Potassium/sodium hyperpolarization-activated cycli	8e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-14
3iwz_A	230	CAP-like, catabolite activation-like protein; XCC,	9e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-13
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-13
4f8a_A	160	Potassium voltage-gated channel subfamily H membe;	4e-13
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-13
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-13
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-13
3dv8_A	220	Transcriptional regulator, CRP/FNR family; cyclic	7e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-13
3b02_A	195	Transcriptional regulator, CRP family; structural	3e-12
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-12
3ukn_A	212	Novel protein similar to vertebrate potassium VOL	5e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-12
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	9e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
2zcw_A	202	TTHA1359, transcriptional regulator, FNR/CRP famil	1e-11
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	1e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-11
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-11
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-10
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-10
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	4e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-10
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	5e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	8e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-10
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-10
2byv_E	999	RAP guanine nucleotide exchange factor 4; EPAC2, C	9e-10
2byv_E	999	RAP guanine nucleotide exchange factor 4; EPAC2, C	9e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-09
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-09
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	6e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	8e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	9e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-08
3cf6_E	694	RAP guanine nucleotide exchange factor (GEF) 4; EP	4e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	5e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-07
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	7e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	7e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-04

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  205 bits (524), Expect = 1e-63
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 60/240 (25%)

Query: 120 SSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
            S+ E   K  ++  ++        + +L     I TLG G FGRV LV+        +A
Sbjct: 13  ESVKEFLAKAKEDFLKKWE-TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-GNHYA 70

Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET-SER 238
           +K + K +V                                      ++ K ++ T +E+
Sbjct: 71  MKILDKQKV--------------------------------------VKLKQIEHTLNEK 92

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           R                   I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR
Sbjct: 93  R-------------------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
             G F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  176 bits (448), Expect = 1e-52
 Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 59/214 (27%)

Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
             L D +++ TLG G FGRV L++   +  R +A+K +KK  V                 
Sbjct: 3   YSLQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIV----------------- 44

Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDET-SERRRAPQIVETRQQQHIMSEKEIMGEAN 264
                                +R K V+ T  ER                    ++    
Sbjct: 45  ---------------------VRLKQVEHTNDERL-------------------MLSIVT 64

Query: 265 CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS 324
             FI++++ TF+D + ++M+M+   GGEL+++LR    F +   +FY A V  A +YLHS
Sbjct: 65  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124

Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           ++IIYRDLKPEN+LL  +G++K+ DFGFAK +  
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  175 bits (447), Expect = 1e-52
 Identities = 63/219 (28%), Positives = 91/219 (41%), Gaps = 57/219 (26%)

Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAAD 203
           R  R  D +    LG G F  V L +     SR +A+K ++K  +               
Sbjct: 25  RKKRPEDFKFGKILGEGSFSTVVLARELAT-SREYAIKILEKRHI--------------- 68

Query: 204 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA 263
                                  I+   V                       E+++M   
Sbjct: 69  -----------------------IKENKVPYV------------------TRERDVMSRL 87

Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
           +  F VKLY TF+D + LY  +     GEL   +R  G+FD+  TRFYTA +V A +YLH
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            + II+RDLKPEN+LL+   ++++ DFG AK L      
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  159 bits (404), Expect = 2e-45
 Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 63/237 (26%)

Query: 121 SLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFAL 180
           ++D   ++Y D  ++ R L      ++  D  V+  +G G FG V+LV+      + +A+
Sbjct: 46  NIDNFLSRYKDTINKIRDL-----RMKAEDYEVVKVIGRGAFGEVQLVRHKST-RKVYAM 99

Query: 181 KQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
           K + K +++   D              +                            ER  
Sbjct: 100 KLLSKFEMIKRSD-------------SAFFW------------------------EERD- 121

Query: 241 APQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK 300
                             IM  AN  ++V+L+  F+D +YLYM+ME   GG+L  ++   
Sbjct: 122 ------------------IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-N 162

Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +  +   RFYTA VV A D +HS   I+RD+KP+N+LL  SG++KL DFG   K+ 
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  155 bits (393), Expect = 6e-44
 Identities = 38/116 (32%), Positives = 70/116 (60%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           + VE  + +++  E +IM      F+V L+ +F+D++ ++M+++  LGG+L   L+   +
Sbjct: 52  KCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH 111

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
           F + T + +   +V A DYL ++ II+RD+KP+N+LL   G+V + DF  A  L  
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  153 bits (389), Expect = 6e-43
 Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 61/236 (25%)

Query: 126 RTKYVDETSER-RRLNEEFRSLRLS--DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQ 182
           R K + E  E  +    + + +RL   D  ++  +G G FG V +V++  +  + FA+K 
Sbjct: 48  REKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKI 106

Query: 183 MKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAP 242
           + K +++   +              +C                    +      ER    
Sbjct: 107 LNKWEMLKRAE-------------TAC-------------------FR-----EERD--- 126

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKG 301
                           ++   +  +I  L+  F+D   LY++M+  +GG+L T+L + + 
Sbjct: 127 ----------------VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED 170

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
              +   RFY A +V A D +H  + ++RD+KP+N+L+  +G+++L DFG   KL+
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  147 bits (374), Expect = 3e-42
 Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 57/217 (26%)

Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAAD 203
           R   L D  +   LG G FG V L +                       + ++  I+A  
Sbjct: 4   RQWALEDFEIGRPLGKGKFGNVYLAR-----------------------EKQSKFILALK 40

Query: 204 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA 263
                  V+ +                            Q+ +   +  +  E EI    
Sbjct: 41  -------VLFKA---------------------------QLEKAGVEHQLRREVEIQSHL 66

Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
               I++LY  F D   +Y+++E    G ++  L+    FD+  T  Y   +  A  Y H
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           S+ +I+RD+KPENLLL ++G +K+ DFG++      R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  148 bits (375), Expect = 3e-41
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 61/236 (25%)

Query: 126 RTKYVDETSERRR-LNEEFRSLRLS--DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQ 182
           + KYV +  +    +    + +RL   D  ++  +G G F  V +V++     + +A+K 
Sbjct: 35  QDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQT-GQVYAMKI 93

Query: 183 MKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAP 242
           M K  ++   +             VSC                    +      ER    
Sbjct: 94  MNKWDMLKRGE-------------VSC-------------------FR-----EERD--- 113

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
                           ++   +  +I +L+  F+D+ YLY++ME  +GG+L T+L   G 
Sbjct: 114 ----------------VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE 157

Query: 303 -FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                  RFY A +V A D +H    ++RD+KP+N+LL   G+++L DFG   KL 
Sbjct: 158 RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  143 bits (363), Expect = 1e-40
 Identities = 37/118 (31%), Positives = 64/118 (54%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I+++Y  F D+K +Y+++E    GEL+  L+  G 
Sbjct: 51  QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR 110

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           FD+  +  +   + +A  Y H R +I+RD+KPENLL+   G +K+ DFG++      R
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  143 bits (362), Expect = 5e-40
 Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 57/228 (25%)

Query: 134 SERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ--IAGDPSRSFALKQMKKSQVMNL 191
           S    +N     +R     ++  LG GG+G+V  V+     +  + FA+K +KK      
Sbjct: 2   SSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK------ 55

Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
                A IV                             K    T                
Sbjct: 56  -----AMIVR--------------------------NAKDTAHT---------------- 68

Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
              +E+ I+ E    FIV L   F+    LY+++E   GGEL+  L  +G F + T  FY
Sbjct: 69  --KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY 126

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            A +  A  +LH + IIYRDLKPEN++L+  G+VKL DFG  K+ I  
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  142 bits (361), Expect = 6e-40
 Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 59/232 (25%)

Query: 130 VDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ--IAGDPSRSFALKQMKKSQ 187
           + E +    + E       S   ++  LG G FG+V LV+     D  + +A+K      
Sbjct: 5   IKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV----- 59

Query: 188 VMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
                 L+ A +                                                
Sbjct: 60  ------LKKATLKV---------------------------------------------- 67

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           R +     E++I+ E N  FIVKL+  F+ +  LY++++   GG+L+T L  +  F +  
Sbjct: 68  RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 127

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            +FY A +  A D+LHS  IIYRDLKPEN+LL   G++KL DFG +K+ I  
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  143 bits (362), Expect = 1e-39
 Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 58/231 (25%)

Query: 130 VDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQ 187
           V        L      + + +  ++  LG G +G+V LV+     D  + +A+K      
Sbjct: 35  VKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV----- 89

Query: 188 VMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
                 L+ A IV                                               
Sbjct: 90  ------LKKATIVQKA-------------------------------------------- 99

Query: 248 RQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
           +  +H  +E++++       F+V L+  F+ +  L+++++   GGEL+T L  +  F + 
Sbjct: 100 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH 159

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             + Y   +V A ++LH   IIYRD+K EN+LL ++G+V L DFG +K+ +
Sbjct: 160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  140 bits (356), Expect = 9e-39
 Identities = 46/117 (39%), Positives = 74/117 (63%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           I++ ++++HIMSE+ ++ +     F+V L+ +F+    LY +++   GGEL+  L+ +  
Sbjct: 76  ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC 135

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           F +   RFY A +  A  YLHS NI+YRDLKPEN+LL + G++ L DFG  K+ I  
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  136 bits (344), Expect = 3e-37
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           ++     +  M EK ++  A    F+  ++ TF+ K+ L+ +ME   GG+L   ++    
Sbjct: 55  VLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 114

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           FD +   FY A ++    +LHS+ I+YRDLK +N+LL   G++K+ DFG  K+ +  
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  135 bits (343), Expect = 4e-37
 Identities = 41/116 (35%), Positives = 64/116 (55%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  +  F
Sbjct: 43  IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF 102

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I  
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  139 bits (352), Expect = 1e-36
 Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 63/289 (21%)

Query: 81  FFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSL-----DEIRTKYVDETSE 135
           +  ++ L      + + +      +    +  + F   I  +      ++  K+++    
Sbjct: 112 YIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKF 171

Query: 136 RRRLN----EEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNL 191
            R       E    L ++D  V   +G GGFG V   + A D  + +A+K + K ++   
Sbjct: 172 TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMK 230

Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
                A                                      +ER             
Sbjct: 231 QGETLAL-------------------------------------NERI------------ 241

Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
            ++    ++   +C FIV +   F     L  +++   GG+L   L   G F +A  RFY
Sbjct: 242 -ML---SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
            A ++   +++H+R ++YRDLKP N+LL   G+V++ D G A      +
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  133 bits (338), Expect = 3e-36
 Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           + +      + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +  
Sbjct: 47  VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 106

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
             +   RFY+A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  132 bits (335), Expect = 6e-36
 Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           I++    +  M+EK I+  A N  F+ +L+  F+    L+ +ME   GG+L   ++    
Sbjct: 61  ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR 120

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           FD+A  RFY A ++ A  +LH + IIYRDLK +N+LL   G+ KL DFG  K+ I  
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  132 bits (334), Expect = 7e-36
 Identities = 44/245 (17%), Positives = 91/245 (37%), Gaps = 56/245 (22%)

Query: 119 ISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSF 178
           + S+ +I + Y +     + + E  +   ++D R+I TL  G F ++ L +      + +
Sbjct: 3   LGSMKDILSNYSNLIYLNKYVKE--KDKYINDYRIIRTLNQGKFNKIILCEKDN---KFY 57

Query: 179 ALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 238
           ALK+ +KS +    D                                            +
Sbjct: 58  ALKKYEKSLLEKKRDF------------------------------------------TK 75

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
               +I    +     +E +I+ +   ++ +       +   +Y++ E      +     
Sbjct: 76  SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE 135

Query: 299 DKGNFDDATT--------RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVD 349
                D   T        +     V+ +F Y+H+ +NI +RD+KP N+L+  +G VKL D
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD 195

Query: 350 FGFAK 354
           FG ++
Sbjct: 196 FGESE 200

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  132 bits (334), Expect = 2e-35
 Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           + +      + +EK +  +A N  F+V L+  F+ +  L+ ++E   GG+L   ++ +  
Sbjct: 90  VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 149

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
             +   RFY+A +  A +YLH R IIYRDLK +N+LL + G++KL D+G  K+ + P
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  131 bits (332), Expect = 2e-35
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           +++    +  M EK ++       F+ +L+  F+    LY +ME   GG+L   ++  G 
Sbjct: 58  VIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR 117

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           F +    FY A +     +L S+ IIYRDLK +N++L + G++K+ DFG  K+ I  
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  132 bits (335), Expect = 7e-35
 Identities = 56/244 (22%), Positives = 89/244 (36%), Gaps = 64/244 (26%)

Query: 123 DEIRTKYVDETSERRRL---NEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
                +++D     R L     E + +          LG GGFG V   Q+     + +A
Sbjct: 156 QAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKAT-GKLYA 214

Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 239
            K++ K ++                      +                         E++
Sbjct: 215 CKKLNKKRLKKRKG-------------YQGAM------------------------VEKK 237

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WT 295
                              I+ + +  FIV L   F+ K  L ++M    GG++    + 
Sbjct: 238 -------------------ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278

Query: 296 ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           +  D   F +    FYTA +V   ++LH RNIIYRDLKPEN+LL   G V++ D G A +
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338

Query: 356 LIGP 359
           L   
Sbjct: 339 LKAG 342

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  133 bits (336), Expect = 1e-34
 Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 56/250 (22%)

Query: 110 IDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ 169
           + Q+     I    +   +    T  +   N     ++L+D   +  LG G FG+V L +
Sbjct: 302 LRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSE 361

Query: 170 IAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT 229
             G     +A+K +KK  V+  DD             V C +                  
Sbjct: 362 RKGT-DELYAVKILKKDVVIQDDD-------------VECTM------------------ 389

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
                  E+R    ++                     F+ +L+  F+    LY +ME   
Sbjct: 390 ------VEKR----VLALP--------------GKPPFLTQLHSCFQTMDRLYFVMEYVN 425

Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
           GG+L   ++  G F +    FY A +     +L S+ IIYRDLK +N++L + G++K+ D
Sbjct: 426 GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIAD 485

Query: 350 FGFAKKLIGP 359
           FG  K+ I  
Sbjct: 486 FGMCKENIWD 495

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  130 bits (328), Expect = 3e-34
 Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 1/117 (0%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF 303
           IV   +  H ++E  ++  +   F+  L  +F+    L  +ME   GGEL+  L  +  F
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 245

Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            +   RFY A +V A DYLHS +N++YRDLK ENL+L   G++K+ DFG  K+ I  
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302

>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus} Length = 299

 Score =  123 bits (309), Expect = 9e-33
 Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 5/129 (3%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
           +  +     +T Y+ G+YIIRQGARGDTFFIISKGKV VT +   + +  ++RTL KGD+
Sbjct: 173 LSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDW 232

Query: 82  FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNE 141
           FGEKALQG+D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +   
Sbjct: 233 FGEKALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEA 290

Query: 142 E---FRSLR 147
           E   F +L+
Sbjct: 291 EAAFFANLK 299

>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus} Length = 299

 Score =  104 bits (261), Expect = 5e-26
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y +   II++G  G   +++  GKV+VT       E   + T+  G  FGE A+  +  R
Sbjct: 67  YGKDSCIIKEGDVGSLVYVMEDGKVEVTK------EGVKLCTMGPGKVFGELAILYNCTR 120

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET------------SERRRLNE 141
           TA +       V    ID++ F  ++     I+     E                 +L +
Sbjct: 121 TATVKTLVN--VKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLAD 178

Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
                   +   I   G  G        G+V + +          L+ + K        L
Sbjct: 179 VLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKAL 238

Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
             +D+RTAN++AA  E V+CLVID+++F  LI  LD++  K  ++   + +
Sbjct: 239 QGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAK 287

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  127 bits (320), Expect = 1e-32
 Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 62/239 (25%)

Query: 123 DEIRTKYVDETSERRRL---NEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
                 Y+D     R L     E + +  +  R    LG GGFG V   Q+     + +A
Sbjct: 155 VAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRAT-GKMYA 213

Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 239
            K+++K ++                   +  +                        +E++
Sbjct: 214 CKKLEKKRIKKRKG-------------EAMAL------------------------NEKQ 236

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
                              I+ + N  F+V L   ++ K  L +++    GG+L   +  
Sbjct: 237 -------------------ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277

Query: 300 KGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            G   F +A   FY A +    + LH   I+YRDLKPEN+LL   G++++ D G A  +
Sbjct: 278 MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  120 bits (303), Expect = 1e-31
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 245 VETRQQQHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            + +      +E   +   + + D I++LY      +Y+YM+ME C   +L + L+ K +
Sbjct: 65  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 123

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D    + Y   ++EA   +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  120 bits (302), Expect = 5e-31
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 251 QHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
               +E   +   + + D I++LY      +Y+YM+ME C   +L + L+ K + D    
Sbjct: 99  DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER 157

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           + Y   ++EA   +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 204

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  119 bits (299), Expect = 8e-31
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 245 VETRQQQHIMSEKEIMG--EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            + +      +E   +   + + D I++LY      +Y+YM+ME C   +L + L+ K +
Sbjct: 46  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS 104

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            D    + Y   ++EA   +H   I++ DLKP N L+   G +KL+DFG A ++
Sbjct: 105 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 157

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  117 bits (296), Expect = 8e-31
 Identities = 30/118 (25%), Positives = 56/118 (47%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +  
Sbjct: 52  LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA 111

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
             +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+    
Sbjct: 112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  117 bits (295), Expect = 2e-30
 Identities = 30/118 (25%), Positives = 56/118 (47%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            +++  Q++ +  E  I        +V  +  F+D  ++++++E C    L  + + +  
Sbjct: 78  LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA 137

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
             +   R+Y   +V    YLH   +I+RDLK  NL L+    VK+ DFG A K+    
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  116 bits (292), Expect = 2e-30
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 58/214 (27%)

Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEG 206
           ++ D +V   LG G F  V   +                        + T   VA     
Sbjct: 9   KIEDFKVGNLLGKGSFAGVYRAE-----------------------SIHTGLEVAIK--- 42

Query: 207 VSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD 266
               +ID++                            + +    Q + +E +I  +    
Sbjct: 43  ----MIDKK---------------------------AMYKAGMVQRVQNEVKIHCQLKHP 71

Query: 267 FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLHSR 325
            I++LY  F+D  Y+Y+++E C  GE+   L+++   F +   R +   ++    YLHS 
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            I++RDL   NLLL+ +  +K+ DFG A +L  P
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  114 bits (288), Expect = 1e-29
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 248 RQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDD 305
           + +   ++E     +       V+L + +++   LY+  E C G  L       G    +
Sbjct: 98  KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPE 156

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           A    Y    + A  +LHS+ +++ D+KP N+ L   G  KL DFG   +L
Sbjct: 157 AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  109 bits (275), Expect = 1e-27
 Identities = 46/223 (20%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQ-----------VMNLDDLRT 196
           L+D   I  +G GGFG V   +   D   ++A+K+++              V  L  L  
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVD-DCNYAIKRIRLPNRELAREKVMREVKALAKLEH 63

Query: 197 ANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSE 256
             IV      +       +     I   DE     +   S                   +
Sbjct: 64  PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPM------------DAPSVK 111

Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---DDATTRFYTA 313
              M   +    V   +    K YLY+ M+ C    L   +  + +    +         
Sbjct: 112 IRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI 171

Query: 314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            + EA ++LHS+ +++RDLKP N+  +    VK+ DFG    +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  108 bits (272), Expect = 2e-27
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 14/123 (11%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD-------------KKYLYMLMESCLGGELW 294
            +   I+SE  ++   N  ++V+ Y  + +             K  L++ ME C  G L+
Sbjct: 44  EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY 103

Query: 295 TILRDKGNFDD-ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            ++  +               ++EA  Y+HS+ II+RDLKP N+ +  S  VK+ DFG A
Sbjct: 104 DLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163

Query: 354 KKL 356
           K +
Sbjct: 164 KNV 166

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  109 bits (274), Expect = 2e-27
 Identities = 29/111 (26%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDD 305
           ++++    E  ++       IV+  ++F++   LY++M+ C GG+L+  +  +    F +
Sbjct: 65  KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                +   +  A  ++H R I++RD+K +N+ L+  G V+L DFG A+ L
Sbjct: 125 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175

>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A* Length = 291

 Score =  108 bits (270), Expect = 3e-27
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
            LT+        +++G  I+ QG  GD FFII +G   V  ++  + E   +  L   D+
Sbjct: 173 RLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDY 232

Query: 82  FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL 139
           FGE AL  +  + A +VA  P  + C+ +D+  F +++    +I  + + + +    L
Sbjct: 233 FGEIALLMNRPKAATVVARGP--LKCVKLDRPRFERVLGPCSDILKRNIQQYNSFVSL 288

>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A* Length = 291

 Score = 90.8 bits (225), Expect = 5e-21
 Identities = 42/229 (18%), Positives = 94/229 (41%), Gaps = 34/229 (14%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +  G+ +I+QG  GD F++I +G++ V +        ++  ++ +G  FGE AL     R
Sbjct: 67  FIAGETVIQQGDEGDNFYVIDQGEMDVYV------NNEWATSVGEGGSFGELALIYGTPR 120

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET------------SERRRLNE 141
            A + A     V    ID++++ +++      + K  +E              ER  + +
Sbjct: 121 AATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVAD 178

Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
               ++  D + I   G  G        G   ++Q   +      + ++  S     + L
Sbjct: 179 ALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIAL 238

Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 238
             +  + A +VA  P  + C+ +D+  F +++    +I  + + + +  
Sbjct: 239 LMNRPKAATVVARGP--LKCVKLDRPRFERVLGPCSDILKRNIQQYNSF 285

>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens} Length = 381

 Score =  109 bits (274), Expect = 3e-27
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
            LT+        +++G+ I+ QG  GD F+II++G   V  ++  + E   +  L   D+
Sbjct: 264 RLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDY 323

Query: 82  FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
           FGE AL  +  R A +VA  P  + C+ +D+  F +++    EI  + +   + 
Sbjct: 324 FGEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEILKRNIQRYNS 375

>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens} Length = 381

 Score = 91.7 bits (227), Expect = 7e-21
 Identities = 43/228 (18%), Positives = 91/228 (39%), Gaps = 34/228 (14%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +  G+ +I+QG  GD F+++ +G+V V +        +++  + +G  FGE AL     R
Sbjct: 158 HIAGETVIQQGNEGDNFYVVDQGEVDVYV------NGEWVTNISEGGSFGELALIYGTPR 211

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD------------ETSERRRLNE 141
            A + A     +    ID++++ +++      + K  +            E  ER  + +
Sbjct: 212 AATVKAKTD--LKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVAD 269

Query: 142 EFRSLRLSDLRVITTLGVGG-------FGRVELVQIAGDPSRSFALKQMKKSQV---MNL 191
               ++  D   I   G  G        G   ++Q          + ++  S     + L
Sbjct: 270 ALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIAL 329

Query: 192 --DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 237
             +  R A +VA  P  + C+ +D+  F +++    EI  + +   + 
Sbjct: 330 LLNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSEILKRNIQRYNS 375

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  108 bits (273), Expect = 3e-27
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           V + S +  A +I+  R + +   E   +        IVKL++ F D+ + +++ME   G
Sbjct: 31  VHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90

Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKL 347
           GEL+  ++ K +F +    +    +V A  ++H   +++RDLKPENLL +       +K+
Sbjct: 91  GELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKI 150

Query: 348 VDFGFAKKL 356
           +DFGFA+  
Sbjct: 151 IDFGFARLK 159

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  108 bits (271), Expect = 4e-27
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGN--- 302
           R     M E E++ + N   IVKL+   ++   ++  ++ME C  G L+T+L +  N   
Sbjct: 49  RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKL 356
             ++        VV   ++L    I++R++KP N++           KL DFG A++L
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  109 bits (273), Expect = 5e-27
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGN--- 302
           R     M E E++ + N   IVKL+   ++   ++  ++ME C  G L+T+L +  N   
Sbjct: 49  RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKL 356
             ++        VV   ++L    I++R++KP N++           KL DFG A++L
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A Length = 138

 Score =  101 bits (254), Expect = 2e-26
 Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
               G  I R G  GD  F + +G V V    P          L  G FFGE AL   + 
Sbjct: 38  TVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP--------VELGPGAFFGEMALISGEP 89

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE 142
           R+A + AA    VS L +    F  L SS  EI   +     ERR     
Sbjct: 90  RSATVSAATT--VSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGAAAS 137

>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A Length = 138

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
            + R+A + AA    VS L +    F  L SS  EI   +     ERR A
Sbjct: 87  GEPRSATVSAATT--VSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGA 134

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  107 bits (268), Expect = 2e-26
 Identities = 34/252 (13%), Positives = 74/252 (29%), Gaps = 41/252 (16%)

Query: 112 QETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIA 171
           + T   + S+ D + +  +  T +  R+  E    R   L   T LG             
Sbjct: 37  RTTSEYMQSAADSLVSTSLWNTGQPFRVESEL-GERPRTLVRGTVLGQEDPYAYLEATDQ 95

Query: 172 GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY 231
                SF +     ++    + +                               +   + 
Sbjct: 96  ET-GESFEVHVPYFTERPPSNAI-------------------------------KQMKEE 123

Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLME 286
           V      R      + +     +   +++ +     ++++    +D       +LY  M+
Sbjct: 124 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ 183

Query: 287 SCL---GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG 343
           S L   G  L +      +         T  V+     LH   +++  L+P +++L   G
Sbjct: 184 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 243

Query: 344 YVKLVDFGFAKK 355
            V L  F    +
Sbjct: 244 GVFLTGFEHLVR 255

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  106 bits (266), Expect = 3e-26
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +   + E       +   IV LY   ++  ++ + ME   GG L  +++  G   +    
Sbjct: 94  EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL 153

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKL 356
           +Y    +E  +YLH+R I++ D+K +N+LLS+ G    L DFG A  L
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  104 bits (261), Expect = 6e-26
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 8/131 (6%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIM----GEANCDFIVKLYKTFKDKKYLYMLM 285
           K +D T     + + V+  ++   + E +I+    G  N   I++L  T++   + +++ 
Sbjct: 48  KIIDVTGGGSFSAEEVQELREA-TLKEVDILRKVSGHPN---IIQLKDTYETNTFFFLVF 103

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYV 345
           +    GEL+  L +K    +  TR     ++E    LH  NI++RDLKPEN+LL     +
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI 163

Query: 346 KLVDFGFAKKL 356
           KL DFGF+ +L
Sbjct: 164 KLTDFGFSCQL 174

>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT} Length = 187

 Score =  101 bits (254), Expect = 7e-26
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
                 ++ +G  GD   +I  G+V V    PN    + I  +  G   GE ++     R
Sbjct: 67  APRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAIIGEMSMIDGMPR 125

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY----VDETSER-RRLNEEFRSLRL 148
           +A+ VA+ P      V+ ++   QL++++ ++  K     +   + R R   +      L
Sbjct: 126 SASCVASLP--TDFAVLSRDALYQLLANMPKLGNKVLIRLLQLLTARFRESYDRILPKTL 183

Query: 149 SDL 151
            +L
Sbjct: 184 GEL 186

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  104 bits (261), Expect = 7e-26
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
            + +    I+ E E++ + +   I+KL++  +D    Y++ E   GGEL+  +  +  F 
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL 356
           +         V     Y+H  NI++RDLKPEN+LL +      +K++DFG +   
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  104 bits (261), Expect = 1e-25
 Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 7/132 (5%)

Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMES 287
           ++  + +  A +I+E +    +  +  E E++ +      +++L + F+++   Y++ E 
Sbjct: 33  INLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92

Query: 288 CLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY--- 344
             GG + + +  + +F++         V  A D+LH++ I +RDLKPEN+L         
Sbjct: 93  MRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152

Query: 345 VKLVDFGFAKKL 356
           VK+ DF     +
Sbjct: 153 VKICDFDLGSGI 164

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  104 bits (261), Expect = 1e-25
 Identities = 29/123 (23%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           +R++        ++ I  E  I+ +     ++ L+  ++++  + +++E   GGEL+  L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
             K +  +     +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

Query: 354 KKL 356
            ++
Sbjct: 167 HEI 169

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  104 bits (262), Expect = 2e-25
 Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 239 RRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           R++        ++ I  E  I+ +     I+ L+  ++++  + +++E   GGEL+  L 
Sbjct: 48  RQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLA 107

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFAK 354
            K +  +     +   +++  +YLH++ I + DLKPEN++L        ++KL+DFG A 
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167

Query: 355 KL 356
           ++
Sbjct: 168 EI 169

>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae} Length = 246

 Score =  101 bits (254), Expect = 2e-25
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
              +        Y+ G+ IIR+G +G+ F++I  G V V+ K      +  I  L   D+
Sbjct: 141 RAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKK-----GQGVINKLKDHDY 195

Query: 82  FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
           FGE AL  D  R A + A          + +  F +L+    ++
Sbjct: 196 FGEVALLNDLPRQATVTATKR--TKVATLGKSGFQRLLGPAVDV 237

>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae} Length = 246

 Score = 92.6 bits (230), Expect = 6e-22
 Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 35/216 (16%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
             +G  II+QG +GD F+++ KG V           +  + +   G  FGE AL  +  R
Sbjct: 35  VPKGATIIKQGDQGDYFYVVEKGTVDFY------VNDNKVNSSGPGSSFGELALMYNSPR 88

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRV 153
            A +VA          +D+ TF +++      +    D+  +   +    +SL   D   
Sbjct: 89  AATVVATSD--CLLWALDRLTFRKILLGSSFKKRLMYDDLLKSMPV---LKSLTTYDRAK 143

Query: 154 ITT-LGVGGFGRVELVQIAGDPSRSF--------ALKQMKKSQVMNL------------- 191
           +   L    +   E +   GD   +F         + +  +  +  L             
Sbjct: 144 LADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLN 203

Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 227
           D  R A + A          + +  F +L+    ++
Sbjct: 204 DLPRQATVTATKR--TKVATLGKSGFQRLLGPAVDV 237

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  102 bits (256), Expect = 4e-25
 Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 61/229 (26%)

Query: 132 ETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNL 191
           +   ++ L  +     L++ R+   +G G F  V       D     ALK+++   +M+ 
Sbjct: 15  QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLD-GVPVALKKVQIFDLMDA 73

Query: 192 DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQ 251
                                 +E    L+  L+                          
Sbjct: 74  KARADCI---------------KEI--DLLKQLN-------------------------- 90

Query: 252 HIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----RDKGNFDDAT 307
           H               ++K Y +F +   L +++E    G+L  ++    + K    + T
Sbjct: 91  H-------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT 137

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              Y   +  A +++HSR +++RD+KP N+ ++ +G VKL D G  +  
Sbjct: 138 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  103 bits (258), Expect = 4e-25
 Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 232 VDETSERRRAPQIVETRQQQH-IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLG 290
             + +++  A ++++    +  + +E  ++   +   I+KL + F+    + +++E   G
Sbjct: 73  KQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132

Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKL 347
           GEL+  + +KG + +         ++EA  YLH   I++RDLKPENLL +T      +K+
Sbjct: 133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI 192

Query: 348 VDFGFAKKL 356
            DFG +K +
Sbjct: 193 ADFGLSKIV 201

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  105 bits (263), Expect = 5e-25
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKG 301
           + ++    E +IM + N   +V   +     + L       + ME C GG+L   L    
Sbjct: 54  KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE 113

Query: 302 N---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKK 355
           N     +   R   + +  A  YLH   II+RDLKPEN++L         K++D G+AK+
Sbjct: 114 NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173

Query: 356 L 356
           L
Sbjct: 174 L 174

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  102 bits (257), Expect = 5e-25
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)

Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLG 290
           + + +    A +I++  ++     E EI+        I+ L   + D KY+Y++ E   G
Sbjct: 42  IHKATNMEFAVKIIDKSKRD-PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100

Query: 291 GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVK 346
           GEL   +  +  F +         + +  +YLH++ +++RDLKP N+L          ++
Sbjct: 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR 160

Query: 347 LVDFGFAKKL 356
           + DFGFAK+L
Sbjct: 161 ICDFGFAKQL 170

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  101 bits (254), Expect = 6e-25
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           +RR         ++ I  E  I+ E     I+ L+  F++K  + +++E   GGEL+  L
Sbjct: 40  KRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
            +K +  +     +   +++   YLHS+ I + DLKPEN++L      +  +KL+DFG A
Sbjct: 100 AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159

Query: 354 KKL 356
            K+
Sbjct: 160 HKI 162

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  101 bits (254), Expect = 6e-25
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)

Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
           V + +  RRA + +             E EIM   +   I++LY+TF+D   +Y++ME C
Sbjct: 29  VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88

Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---V 345
            GGEL+  +  K  F ++        V+ A  Y H  N+ +RDLKPEN L  T      +
Sbjct: 89  TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 148

Query: 346 KLVDFGFAKK 355
           KL+DFG A +
Sbjct: 149 KLIDFGLAAR 158

>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B* Length = 416

 Score =  103 bits (258), Expect = 7e-25
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE-----EKYIRTL 76
            L +V       Y +G+ II QG   D+FFI+  G+VK+TMK+   +E        I   
Sbjct: 283 RLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARC 342

Query: 77  YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
           ++G +FGE AL  +  R A+  A     V CL +D + F +L+    EI  + +    E+
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQ 400

Query: 137 RR 138
             
Sbjct: 401 LV 402

>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B* Length = 416

 Score =  100 bits (251), Expect = 7e-24
 Identities = 50/241 (20%), Positives = 92/241 (38%), Gaps = 41/241 (17%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL 92
             KEG+++I QG  GD F++I +G   + +K       + +        FGE AL  +  
Sbjct: 172 LVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDG--VGRCVGNYDNRGSFGELALMYNTP 229

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLR 152
           + A I A  P   +   +D+ TF ++I   +  + K  +   E        +SL +S+  
Sbjct: 230 KAATITATSP--GALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPF---LKSLEVSERL 284

Query: 153 -VITTLGVGGFGRVELVQIAGDPSRSF------------------ALKQMKKSQVMNL-- 191
            V+  +G   +   E +   GD + SF                   +++    ++     
Sbjct: 285 KVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFR 344

Query: 192 -----------DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRR 240
                      +  R A+  A     V CL +D + F +L+    EI  + +    E+  
Sbjct: 345 GQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLV 402

Query: 241 A 241
           A
Sbjct: 403 A 403

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  102 bits (257), Expect = 7e-25
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 238 RRRAPQIVETRQQQHIMSEKEIM----GEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL 293
             R         ++    E  I+    G  +   I+ L  +++   +++++ +    GEL
Sbjct: 131 AERLSPEQLEEVREATRRETHILRQVAGHPH---IITLIDSYESSSFMFLVFDLMRKGEL 187

Query: 294 WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           +  L +K    +  TR     ++EA  +LH+ NI++RDLKPEN+LL  +  ++L DFGF+
Sbjct: 188 FDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247

Query: 354 KKL 356
             L
Sbjct: 248 CHL 250

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  103 bits (258), Expect = 1e-24
 Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 8/136 (5%)

Query: 232 VDETSERRRAPQIVETRQ-----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V   + +  A  I+ T++      Q +  E  I        IV+L+ +  ++ + Y++ +
Sbjct: 31  VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90

Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-- 344
              GGEL+  +  +  + +A        ++EA  + H   +++R+LKPENLLL++     
Sbjct: 91  LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150

Query: 345 -VKLVDFGFAKKLIGP 359
            VKL DFG A ++ G 
Sbjct: 151 AVKLADFGLAIEVEGE 166

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  100 bits (252), Expect = 1e-24
 Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           +  R  Q +  E  I  +     IV+L+ + +++ + Y++ +   GGEL+  +  +  + 
Sbjct: 44  LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 103

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL 356
           +A        ++E+  Y HS  I++R+LKPENLLL++      VKL DFG A ++
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  100 bits (252), Expect = 2e-24
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF----IVKLYKTFKDKKYLYMLM 285
           K +     R R               E  ++ +         +++L   F+ ++   +++
Sbjct: 62  KVIP----RNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVL 117

Query: 286 E-SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SG 343
           E      +L+  + +KG   +  +R +   VV A  + HSR +++RD+K EN+L+    G
Sbjct: 118 ERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG 177

Query: 344 YVKLVDFGFA 353
             KL+DFG  
Sbjct: 178 CAKLIDFGSG 187

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  100 bits (252), Expect = 2e-24
 Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)

Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
           +RR         ++ I  E  I+ E     ++ L++ +++K  + +++E   GGEL+  L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST----SGYVKLVDFGFA 353
            +K +  +     +   ++    YLHS  I + DLKPEN++L         +K++DFG A
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

Query: 354 KKL 356
            K+
Sbjct: 166 HKI 168

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  103 bits (258), Expect = 2e-24
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)

Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
            +  +    A + V T     ++ +  E + M       +V L+  F+D   + M+ E  
Sbjct: 177 TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236

Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
            GGEL+  +  +     +     Y   V +   ++H  N ++ DLKPEN++ +T  S  +
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296

Query: 346 KLVDFGFAKKL 356
           KL+DFG    L
Sbjct: 297 KLIDFGLTAHL 307

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  101 bits (253), Expect = 3e-24
 Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 232 VDETSERRRAPQIVETRQ-----QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLME 286
           V +T+    A +I+ T++      Q +  E  I  +     IV+L+ + +++ + Y++ +
Sbjct: 49  VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108

Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SG 343
              GGEL+  +  +  + +A        ++E+  Y HS  I++R+LKPENLLL++     
Sbjct: 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168

Query: 344 YVKLVDFGFAKKL 356
            VKL DFG A ++
Sbjct: 169 AVKLADFGLAIEV 181

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  100 bits (251), Expect = 3e-24
 Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES-C 288
           K++ +  E+      +E  +   +  E  I+       I+K+   F+++ +  ++ME   
Sbjct: 55  KFIKK--EKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHG 112

Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV 348
            G +L+  +      D+    +    +V A  YL  ++II+RD+K EN++++    +KL+
Sbjct: 113 SGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI 172

Query: 349 DFGFA 353
           DFG A
Sbjct: 173 DFGSA 177

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 99.2 bits (248), Expect = 6e-24
 Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 6/129 (4%)

Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
               + +  A + ++         + +E  ++ +   + IV L   ++   + Y++M+  
Sbjct: 29  KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88

Query: 289 LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YV 345
            GGEL+  + ++G + +         V+ A  YLH   I++RDLKPENLL  T      +
Sbjct: 89  SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKI 148

Query: 346 KLVDFGFAK 354
            + DFG +K
Sbjct: 149 MITDFGLSK 157

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  100 bits (250), Expect = 6e-24
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--- 302
                + +  E  I        IV+L +T+     LYM+ E   G +L   +  + +   
Sbjct: 66  PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF 125

Query: 303 -FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG 358
            + +A    Y   ++EA  Y H  NII+RD+KP  +LL++   S  VKL  FG A +L  
Sbjct: 126 VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185

Query: 359 P 359
            
Sbjct: 186 S 186

>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B* Length = 161

 Score = 95.5 bits (238), Expect = 7e-24
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 15/131 (11%)

Query: 13  FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY 72
           F +L +   +  ++    +   KEG+++I QG  GD F++I +G   + +K       + 
Sbjct: 46  FKNL-DPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDG--VGRC 102

Query: 73  IRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE 132
           +        FGE AL  +  R A I A  P   +   +D+ TF ++I             
Sbjct: 103 VGNYDNRGSFGELALMYNTPRAATITATSP--GALWGLDRVTFRRIIV----------KN 150

Query: 133 TSERRRLNEEF 143
            +++R++ E F
Sbjct: 151 NAKKRKMYESF 161

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  100 bits (250), Expect = 8e-24
 Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 232 VDETSERRRAPQIVETRQ---QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
            +  +  + A +I++TR    ++ + +E  +M + +   +++LY  F+ K  + ++ME  
Sbjct: 109 EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168

Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
            GGEL+  I+ +  N  +  T  +   + E   ++H   I++ DLKPEN+L     +  +
Sbjct: 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI 228

Query: 346 KLVDFGFAKKL 356
           K++DFG A++ 
Sbjct: 229 KIIDFGLARRY 239

>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens} Length = 134

 Score = 94.4 bits (235), Expect = 8e-24
 Identities = 13/94 (13%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           +   + G  I+  G   D++++I  G V+++        +  +  L+ G+ FG       
Sbjct: 42  EVVEQAGAIILEDGQELDSWYVILNGTVEIS------HPDGKVENLFMGNSFGITPTLDK 95

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDE 124
                 +     +    + I Q+ + ++++ +++
Sbjct: 96  QYMHGIVRTKV-DDCQFVCIAQQDYWRILNHVEK 128

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  101 bits (253), Expect = 8e-24
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           V T     ++ E  ++   +   I+KLY  F+DK+  Y++ME   GGEL+  +  +  F+
Sbjct: 75  VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN 134

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKK 355
           +         V+    YLH  NI++RDLKPENLLL +      +K+VDFG +  
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  100 bits (250), Expect = 9e-24
 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 6/131 (4%)

Query: 232 VDETSERRRAPQIVETR---QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC 288
           V++ + R    + + T     +  + +E  IM + +   ++ L+  F+DK  + +++E  
Sbjct: 71  VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130

Query: 289 LGGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYV 345
            GGEL+  I  +     +A    Y     E   ++H  +I++ D+KPEN++  T  +  V
Sbjct: 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSV 190

Query: 346 KLVDFGFAKKL 356
           K++DFG A KL
Sbjct: 191 KIIDFGLATKL 201

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.5 bits (246), Expect = 9e-24
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF--DDAT 307
           Q +  E  +        IV+   +F +  ++ + ME   GG L  +LR K G    ++ T
Sbjct: 64  QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG 358
             FYT  ++E   YLH   I++RD+K +N+L++T SG +K+ DFG +K+L G
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175

>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2 Length = 469

 Score =  100 bits (250), Expect = 1e-23
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 6/130 (4%)

Query: 12  YFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEK 71
              HL              ++  K G  +  QG  G +++II KG V V +       + 
Sbjct: 344 ALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KG 398

Query: 72  YIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD 131
            + TL++GD FG+ AL  D  R A+IV  + +    L +D+E FN+++  ++    +  +
Sbjct: 399 VVCTLHEGDDFGKLALVNDAPRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKE 457

Query: 132 ETSERRRLNE 141
              +   L +
Sbjct: 458 HDQDVLVLEK 467

>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2 Length = 469

 Score = 78.8 bits (193), Expect = 3e-16
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNS-TEEKYIRTLYKGDFFGEKALQGDDL 92
            ++G  + RQG  G  ++ +  G + V + + +S  +   I TL  G  FGE ++  +  
Sbjct: 70  LEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE-SILDNTP 128

Query: 93  RTANIVAADPEGVSCLVIDQETFNQ 117
           R A IV  +      L I+QE F  
Sbjct: 129 RHATIVTRES--SELLRIEQEDFKA 151

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 98.5 bits (246), Expect = 1e-23
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           E     ++ +E EI+ + N   I+K+   F  + Y Y+++E   GGEL+  +       +
Sbjct: 55  EADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKE 113

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
           AT + Y   ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  100 bits (251), Expect = 2e-23
 Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 50/204 (24%)

Query: 156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQE 215
            LG G +G V L +         A+K +KKSQ            +    E +        
Sbjct: 43  KLGSGAYGEVLLCKEKNG-HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI-------- 93

Query: 216 TFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF 275
                    +EI                         ++     +   N   I+KL+  F
Sbjct: 94  --------YNEIS------------------------LLKS---LDHPN---IIKLFDVF 115

Query: 276 KDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPE 335
           +DKKY Y++ E   GGEL+  + ++  FD+         ++    YLH  NI++RD+KPE
Sbjct: 116 EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175

Query: 336 NLLLSTSGY---VKLVDFGFAKKL 356
           N+LL        +K+VDFG +   
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFF 199

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 98.1 bits (245), Expect = 2e-23
 Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 232 VDETSERRRAPQIVETRQQQH--IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           V+ +S++    + V+ +      +  E  I+  A    I+ L+++F+  + L M+ E   
Sbjct: 25  VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84

Query: 290 GGELW-TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVK 346
           G +++  I       ++     Y   V EA  +LHS NI + D++PEN++  T  S  +K
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144

Query: 347 LVDFGFAKKL 356
           +++FG A++L
Sbjct: 145 IIEFGQARQL 154

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 97.7 bits (244), Expect = 2e-23
 Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 35/199 (17%)

Query: 156 TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQE 215
            +G G +G V+L     D +  +A+K + K +++                     +  + 
Sbjct: 20  EIGKGSYGVVKLAYNEND-NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78

Query: 216 TFNQLISSLDEIRT-KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKT 274
              Q+     EI   K +D                  +++   E++ + N          
Sbjct: 79  PIEQVYQ---EIAILKKLD----------------HPNVVKLVEVLDDPN---------- 109

Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
              + +LYM+ E    G +  +        +   RFY   +++  +YLH + II+RD+KP
Sbjct: 110 ---EDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP 165

Query: 335 ENLLLSTSGYVKLVDFGFA 353
            NLL+   G++K+ DFG +
Sbjct: 166 SNLLVGEDGHIKIADFGVS 184

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 99.8 bits (249), Expect = 3e-23
 Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
            + +    I+ E E++ + +   I+KL++  +D    Y++ E   GGEL+  +  +  F 
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKK 355
           +         V     Y+H  NI++RDLKPEN+LL +      +K++DFG +  
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 99.4 bits (248), Expect = 4e-23
 Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 232 VDETSERRRAPQIVETRQ------QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLM 285
            D+ + +  A +++  RQ      ++ ++ E +++ + +   I+KLY+ F+DK Y Y++ 
Sbjct: 46  KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105

Query: 286 ESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-- 343
           E   GGEL+  +  +  F +         V+    Y+H   I++RDLKPENLLL +    
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 165

Query: 344 -YVKLVDFGFAKK 355
             ++++DFG +  
Sbjct: 166 ANIRIIDFGLSTH 178

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 97.3 bits (243), Expect = 4e-23
 Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 6/116 (5%)

Query: 247 TRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGEL--WTILRDKGNF 303
              +  I+ E  ++  A  C  ++ L++ +++   + +++E   GGE+    +       
Sbjct: 69  QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMV 128

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKL 356
            +         ++E   YLH  NI++ DLKP+N+LLS+    G +K+VDFG ++K+
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 98.6 bits (246), Expect = 4e-23
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           E     ++ +E EI+ + N   I+K+   F  + Y Y+++E   GGEL+  +       +
Sbjct: 180 EADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKE 238

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
           AT + Y   ++ A  YLH   II+RDLKPEN+LLS+      +K+ DFG +K L
Sbjct: 239 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 97.6 bits (243), Expect = 4e-23
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   +    
Sbjct: 75  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134

Query: 310 FYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
             +  V++   YL     I++RD+KP N+L+++ G +KL DFG + +LI
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 96.1 bits (240), Expect = 5e-23
 Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGEL----WTILRDKGNFD 304
             + I +E E++   +   I+K+++ F+D   +Y++ME+C GGEL     +         
Sbjct: 63  PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKK 355
           +         ++ A  Y HS++++++DLKPEN+L   +     +K++DFG A+ 
Sbjct: 123 EGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 98.2 bits (244), Expect = 6e-23
 Identities = 29/255 (11%), Positives = 70/255 (27%), Gaps = 41/255 (16%)

Query: 110 IDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQ 169
             + T   + S+ D + +  +  T +  R+  E    R   L   T LG           
Sbjct: 40  NVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGE-RPRTLVRGTVLGQEDPYAYLEAT 98

Query: 170 IAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT 229
                  SF +     ++    + ++                + +E              
Sbjct: 99  DQET-GESFEVHVPYFTERPPSNAIK---------------QMKEEVL------------ 130

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLM 285
                    R      + +     +   +++ +     ++++    +D     ++     
Sbjct: 131 ----RLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPR 186

Query: 286 ESC----LGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
                   G  L +      +         T  V+     LH   +++  L+P +++L  
Sbjct: 187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQ 246

Query: 342 SGYVKLVDFGFAKKL 356
            G V L  F    + 
Sbjct: 247 RGGVFLTGFEHLVRD 261

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 97.0 bits (241), Expect = 1e-22
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 16/124 (12%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-----F 303
           +        E +  +     +K Y     +    ++ E    G L   +    N      
Sbjct: 110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-----------SGYVKLVDFGF 352
                  +   ++   + +H   II+ D+KP+N +L             S  + L+D G 
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ 229

Query: 353 AKKL 356
           +  +
Sbjct: 230 SIDM 233

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 33/111 (29%), Positives = 52/111 (46%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           +I        I  E + +       I+KLY+        +M+ME   GGEL+  +   G 
Sbjct: 48  KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR 107

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            ++   R     ++ A DY H   +++RDLKPEN+LL      K+ DFG +
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 96.7 bits (240), Expect = 1e-22
 Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 44/238 (18%)

Query: 130 VDETSERRRLNEEFRSL---RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS 186
           V  T   +       SL       L+++  L VG    V LV+   +    FALK     
Sbjct: 40  VTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMG 98

Query: 187 QVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVE 246
              +  +L                 + + TF                    R       E
Sbjct: 99  AENSRSELER---------------LHEATFAAA-----------------RLLGESPEE 126

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY--LYMLMESC------LGGELWTILR 298
            R ++ ++   + +   +     +L     D       +LM +       L   L  +  
Sbjct: 127 ARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYV 186

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +G+         TA ++     L S+ +++    P+NL +   G + L D     K+
Sbjct: 187 FRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV 244

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 95.1 bits (237), Expect = 2e-22
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 10/117 (8%)

Query: 256 EKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN--FDDATT 308
           E E+    + C  IV++   +++    +K L ++ME   GGEL++ ++D+G+  F +   
Sbjct: 60  EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLIGPRYS 362
                 + EA  YLHS NI +RD+KPENLL ++      +KL DFGFAK+  G +Y 
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYD 176

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 95.8 bits (239), Expect = 2e-22
 Identities = 39/103 (37%), Positives = 56/103 (54%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q +  E  IM   N   IVKL++  + +K LY++ME   GGE++  L   G   +   R 
Sbjct: 59  QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
               +V A  Y H + I++RDLK ENLLL     +K+ DFGF+
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 95.1 bits (237), Expect = 2e-22
 Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 8/128 (6%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF--IVKLYKTFKDKKYLYMLMES 287
           K+V+    + R     E      +  E  ++ + +  F  +++L   F+      +++E 
Sbjct: 74  KHVE----KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 129

Query: 288 CLG-GELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYV 345
                +L+  + ++G   +   R +   V+EA  + H+  +++RD+K EN+L+    G +
Sbjct: 130 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 189

Query: 346 KLVDFGFA 353
           KL+DFG  
Sbjct: 190 KLIDFGSG 197

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 93.9 bits (234), Expect = 3e-22
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTIL----RDKG 301
            ++Q ++SE  ++ E     IV+ Y    D+    LY++ME C GG+L +++    +++ 
Sbjct: 47  AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ 106

Query: 302 NFDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             D+         +  A    H R+     +++RDLKP N+ L     VKL DFG A+ L
Sbjct: 107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 94.0 bits (234), Expect = 5e-22
 Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 8/116 (6%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTIL----RDK 300
            ++    E ++    N   I++L      ++      ++L+     G LW  +       
Sbjct: 69  DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG 128

Query: 301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +    +    +    + +H++   +RDLKP N+LL   G   L+D G   + 
Sbjct: 129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 93.1 bits (232), Expect = 6e-22
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKD----------------KKYLYMLMESCLGGE 292
             +    E + + + +   IV     +                   K L++ ME C  G 
Sbjct: 47  NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106

Query: 293 LWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
           L   +  +     D          + +  DY+HS+ +I RDLKP N+ L  +  VK+ DF
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF 166

Query: 351 GFAKKL 356
           G    L
Sbjct: 167 GLVTSL 172

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 93.6 bits (233), Expect = 9e-22
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)

Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMG-EANCDFIVKLYKTFKD----KKYLYMLME 286
               + ++ A +++    +     E +     +    IV +   +++    K+ L ++ME
Sbjct: 49  FHRRTGQKCALKLLYDSPK--ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106

Query: 287 SCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
              GGEL++ ++++G+  F +         +  A  +LHS NI +RD+KPENLL ++   
Sbjct: 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK 166

Query: 345 ---VKLVDFGFAKKL 356
              +KL DFGFAK+ 
Sbjct: 167 DAVLKLTDFGFAKET 181

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 92.0 bits (229), Expect = 2e-21
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 74/224 (33%)

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           L+D   I  LG GGFG V   +   D   ++A+K+++                       
Sbjct: 4   LTDFEPIQCLGRGGFGVVFEAKNKVD-DCNYAIKRIRLP--------------------- 41

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                    +    R +             M E + + +     
Sbjct: 42  -------------------------NRELAREKV------------MREVKALAKLEHPG 64

Query: 268 IVKLYKTFKDK------------KYLYMLMESCLGGELWTILRDKGN---FDDATTRFYT 312
           IV+ +  + +K             YLY+ M+ C    L   +  +      + +      
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             + EA ++LHS+ +++RDLKP N+  +    VK+ DFG    +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 91.1 bits (227), Expect = 3e-21
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +VK Y   ++    Y+ +E C GGEL+  +       +   + +   ++    YLH   I
Sbjct: 67  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
            +RD+KPENLLL     +K+ DFG A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 91.2 bits (227), Expect = 4e-21
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 1/107 (0%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTR 309
           +  + E EI+   +  +IVKL   +     L++++E C GG +  I+ +      +   +
Sbjct: 61  EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ 120

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                ++EA ++LHS+ II+RDLK  N+L++  G ++L DFG + K 
Sbjct: 121 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 91.2 bits (227), Expect = 5e-21
 Identities = 28/87 (32%), Positives = 44/87 (50%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +VK Y   ++    Y+ +E C GGEL+  +       +   + +   ++    YLH   I
Sbjct: 67  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +RD+KPENLLL     +K+ DFG A 
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLAT 153

>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B* Length = 154

 Score = 87.4 bits (217), Expect = 5e-21
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 9/97 (9%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +  G+ +I+QG  GD F++I +G++ V +        ++  ++ +G  FGE AL     R
Sbjct: 66  FIAGETVIQQGDEGDNFYVIDQGEMDVYV------NNEWATSVGEGGSFGELALIYGTPR 119

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 129
            A + A     V    ID++++ +++       R  Y
Sbjct: 120 AATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRKMY 154

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 91.7 bits (228), Expect = 6e-21
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV+  +      +L ++ME   GGEL+  + + G F +   RF+   ++    Y HS  I
Sbjct: 78  IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137

Query: 328 IYRDLKPENLLL--STSGYVKLVDFGFAK 354
            +RDLK EN LL  S +  +K+ DFG++K
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK 166

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 92.5 bits (230), Expect = 6e-21
 Identities = 33/111 (29%), Positives = 53/111 (47%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           +I        I  E + +       I+KLY+       ++M+ME   GGEL+  +   G 
Sbjct: 53  KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR 112

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            D+  +R     ++   DY H   +++RDLKPEN+LL      K+ DFG +
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 91.2 bits (227), Expect = 7e-21
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            + ++     +  E   +       I+KLY        + M++E   GGEL+  + +K  
Sbjct: 46  LLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR 104

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
             +   R +   ++ A +Y H   I++RDLKPENLLL  +  VK+ DFG +
Sbjct: 105 MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 92.2 bits (229), Expect = 8e-21
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESC 288
            +      R  A + +        + E +++ E  +   +++ Y +    ++LY+ +E C
Sbjct: 32  VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91

Query: 289 LGGELWTILRDKGNFDDATTRFYTAC-------VVEAFDYLHSRNIIYRDLKPENLLLST 341
               L  ++  K   D+                +     +LHS  II+RDLKP+N+L+ST
Sbjct: 92  -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150

Query: 342 SGY-------------VKLVDFGFAKKLIGPRYS 362
           S               + + DFG  KKL   + S
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 90.5 bits (225), Expect = 9e-21
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 250 QQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
            + I+ + ++ +   +C +IV+ + TF     +++ ME           R +G   +   
Sbjct: 67  NKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERIL 126

Query: 309 RFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
              T  +V+A  YL     +I+RD+KP N+LL   G +KL DFG + +L+
Sbjct: 127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 91.7 bits (228), Expect = 9e-21
 Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 12/135 (8%)

Query: 232 VDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLME 286
            ++ ++ + A ++++   +     E E+    + C  IV++   +++    +K L ++ME
Sbjct: 82  FNKRTQEKFALKMLQDCPK--ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139

Query: 287 SCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY 344
              GGEL++ ++D+G+  F +         + EA  YLHS NI +RD+KPENLL ++   
Sbjct: 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199

Query: 345 ---VKLVDFGFAKKL 356
              +KL DFGFAK+ 
Sbjct: 200 NAILKLTDFGFAKET 214

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 90.5 bits (225), Expect = 1e-20
 Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 1/104 (0%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           + +E  IM +     +V++YK++   + L++LME   GG L  I+  +   ++       
Sbjct: 89  LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVC 147

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             V++A  YLH++ +I+RD+K +++LL+  G VKL DFGF  ++
Sbjct: 148 EAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191

>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens} Length = 142

 Score = 86.2 bits (214), Expect = 1e-20
 Identities = 22/144 (15%), Positives = 54/144 (37%), Gaps = 7/144 (4%)

Query: 1   MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKV 60
           M     L++  +F  L     +  I   S +  +  G  I ++ ++ D   ++ +G V++
Sbjct: 2   MISPERLRVYRFFASL-TDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVEL 60

Query: 61  TMKQPNSTE--EKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQL 118
                 +       + ++  G  FG  +L      T++  A  P  V  + I+     ++
Sbjct: 61  FYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKP--VRVVDINGARLREM 118

Query: 119 ISSLDEIRTKYVDETSER--RRLN 140
             +   +    ++  +     RL+
Sbjct: 119 SENNQALGQVLMNNVAAAVLARLH 142

>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A* Length = 139

 Score = 85.4 bits (212), Expect = 2e-20
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 10/118 (8%)

Query: 13  FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY 72
             +L     I  IV       Y +   II++G  G   +++  GKV+VT       E   
Sbjct: 31  MKNL-ELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT------KEGVK 83

Query: 73  IRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI-RTKY 129
           + T+  G  FGE A+  +  RTA +       V    ID++ F  ++     I  T+Y
Sbjct: 84  LCTMGPGKVFGELAILYNCTRTATVKTLVN--VKLWAIDRQCFQTIMMRTGLIKHTEY 139

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           + I  E  ++ + +  ++ K Y ++     L+++ME   GG    +L   G  D+     
Sbjct: 65  EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIAT 123

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +++  DYLHS   I+RD+K  N+LLS  G VKL DFG A +L
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169

>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3} Length = 149

 Score = 85.8 bits (213), Expect = 2e-20
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 4/118 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
              GD +  +G  GD  +++++GKVK+    P+   E  +  +   +  GE +L     R
Sbjct: 33  LARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDG-RENMLAVVGPSELIGELSLFDPGPR 91

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
           TA   A     V  L +        ++   E+ T  +   + R R+ N+    L  SD
Sbjct: 92  TATGTALTE--VKLLALGHGDLQPWLNVRPEVATALLRAVARRLRKTNDAMSDLVFSD 147

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 91.0 bits (226), Expect = 2e-20
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCL 289
           Y      R  A + +          E +++ E++    +++ + T KD+++ Y+ +E C 
Sbjct: 42  YRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC- 100

Query: 290 GGELWTILRDKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---- 344
              L   +  K                     +LHS NI++RDLKP N+L+S        
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160

Query: 345 -VKLVDFGFAKKLIGPRYS 362
              + DFG  KKL   R+S
Sbjct: 161 KAMISDFGLCKKLAVGRHS 179

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 253 IMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           I++E  +M E     IV    ++     L+++ME   GG L  ++  +   D+       
Sbjct: 64  IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVC 122

Query: 313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              ++A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 88.6 bits (220), Expect = 5e-20
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDAT 307
             Q I+ E  IM + +   +VK Y ++     L+++ME C  G +  I+R +     +  
Sbjct: 67  DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDE 126

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   ++  +YLH    I+RD+K  N+LL+T G+ KL DFG A +L
Sbjct: 127 IATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 88.7 bits (220), Expect = 5e-20
 Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 42/161 (26%)

Query: 238 RRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL 297
            +   + +  +  + I +E  +M + +   I +LY+ ++D++Y+ ++ME C GG L   L
Sbjct: 60  NKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119

Query: 298 RDKGNFDDATTRFYTAC----------------------------------------VVE 317
               +                                                    +  
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179

Query: 318 AFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
           A  YLH++ I +RD+KPEN L ST  S  +KLVDFG +K+ 
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 245 VETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGG---ELWTILRDK 300
           V +++Q+ ++ + +I M   +C F V  Y     +  +++ ME            ++   
Sbjct: 44  VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG 103

Query: 301 GNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
               +         +V+A ++LHS  ++I+RD+KP N+L++  G VK+ DFG +  L+
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 86.6 bits (215), Expect = 2e-19
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 8/115 (6%)

Query: 250 QQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----KGNF 303
           Q+ ++ + ++ M  ++C +IV+ Y     +   ++ ME           +          
Sbjct: 64  QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVI 122

Query: 304 DDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
            +      T   V+A ++L     II+RD+KP N+LL  SG +KL DFG + +L+
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 86.3 bits (214), Expect = 4e-19
 Identities = 31/106 (29%), Positives = 50/106 (47%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           Q I+ E   + +      ++    +  +   +++ME CLG     +   K    +     
Sbjct: 99  QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 158

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            T   ++   YLHS N+I+RD+K  N+LLS  G VKL DFG A  +
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 85.1 bits (211), Expect = 6e-19
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK----TFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           ++Q    E E++       IV+ Y     T K KK + ++ E    G L T L+      
Sbjct: 68  ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK 127

Query: 305 DATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLST-SGYVKLVDFGFAKKL 356
               R +   +++   +LH+R   II+RDLK +N+ ++  +G VK+ D G A   
Sbjct: 128 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
             ++ E + M + +   IV  Y +F  K  L+++M+   GG +  I++      +  +  
Sbjct: 58  DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117

Query: 311 ----YTACVV----EAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                 A ++    E  +YLH    I+RD+K  N+LL   G V++ DFG +  L
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 83.1 bits (206), Expect = 3e-18
 Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 268 IVKLYK--TFKDKKYLYMLMESCLGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
           +++L      ++K+ +YM+ME C+ G  E+   +  +  F       Y   +++  +YLH
Sbjct: 68  VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH 126

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           S+ I+++D+KP NLLL+T G +K+   G A
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156

>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2 Length = 137

 Score = 79.1 bits (195), Expect = 4e-18
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 11/99 (11%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL--- 87
              + E  Y++R+G   +    I +G+++        +       L +GDF G++ L   
Sbjct: 31  PCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWA 90

Query: 88  ------QGDDLRTANIVAADPEGVSCLVIDQETFNQLIS 120
                       T  + A     V    +  +    + S
Sbjct: 91  LDPKSGSNLPSSTRTVKALTE--VEAFALIADELKFVAS 127

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 83.4 bits (206), Expect = 5e-18
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 2/110 (1%)

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDATT 308
             +  E  +    N   IV    TF     L+++      G    ++        ++   
Sbjct: 71  TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAI 130

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG 358
            +    V++A DY+H    ++R +K  ++L+S  G V L        +I 
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180

>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa} Length = 154

 Score = 78.9 bits (195), Expect = 7e-18
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 5/117 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
             +G Y+ RQG     F+ +  G VK+    P   +EK +    + + F E  +      
Sbjct: 40  LDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAEAMMFMDTPN 98

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL 148
             A   A  P          + + + +     +    + + S R  +  +E  +L L
Sbjct: 99  YVATAQAVVP--SQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSL 153

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           +V L + F+ K+ L+++ E      +   L        +   +  T   ++A ++ H  N
Sbjct: 64  LVNLLEVFRRKRRLHLVFE-YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            I+RD+KPEN+L++    +KL DFGFA+ L GP
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 80.8 bits (200), Expect = 2e-17
 Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 31/145 (21%)

Query: 248 RQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL----RDKGN 302
             +Q+ + E            +V+ +  + +  ++ +  E C GG L   +    R    
Sbjct: 52  VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG------------------- 343
           F +A  +     V     Y+HS ++++ D+KP N+ +S +                    
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171

Query: 344 YVKLVDFGFAKKL------IG-PRY 361
             K+ D G   ++       G  R+
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRF 196

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           +V L +  K KK  Y++ E  +   +   L    N  D    + Y   ++    + HS N
Sbjct: 86  LVNLLEVCKKKKRWYLVFE-FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           II+RD+KPEN+L+S SG VKL DFGFA+ L  P
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177

>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A* Length = 227

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 19/178 (10%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +  G  +  +G  GD  +II  GKVK+  + P+   E  +  +   D FGE ++     R
Sbjct: 34  FPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFGELSIFDPGPR 92

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
           T++        V  + +D++     I+   EI  + +   + R RR N     L  +D+ 
Sbjct: 93  TSSATTITE--VRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVP 150

Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            RV   L       ++L Q  G             +Q    +++  A +V A  E V+
Sbjct: 151 GRVAKQL-------LQLAQRFGTQEGGALRVTHDLTQ----EEI--AQLVGASRETVN 195

>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus} Length = 216

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y +G  I  QG  G   ++++ GKV++        +E+ +  L  G+ FGE +L  +  R
Sbjct: 27  YPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFGEMSLLDEGER 85

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
           +A+ VA +      L + +E +  LI  L  +        + R R  + E   L   +  
Sbjct: 86  SASAVAVED--TELLALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEAR 143

Query: 152 -RVITTL 157
            RV   L
Sbjct: 144 NRVAYAL 150

>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A Length = 238

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 13/127 (10%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           + + + I  Q    +    +  G  K+T    N      ++            +  +   
Sbjct: 23  FHKKELIFNQWDPQEYCIFLYDGITKLTSISENG-TIMNLQYYKGAFVIMSGFIDTETSV 81

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
               +    E  +  VI      +L+S              ++      +F    ++   
Sbjct: 82  GYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKL 141

Query: 152 -RVITTL 157
             + + L
Sbjct: 142 GSICSQL 148

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 79.8 bits (197), Expect = 6e-17
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLY-------KTFKDKKYLYMLMESCLGGELWTIL--- 297
           + + I+ E   M + +    IV+         +     +  ++L+     G+L   L   
Sbjct: 68  KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM 127

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             +G     T          A  ++H +   II+RDLK ENLLLS  G +KL DFG A  
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187

Query: 356 LIGP 359
           +   
Sbjct: 188 ISHY 191

>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A* Length = 243

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 21/180 (11%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL- 92
           ++    I   G   +  + + KG VK++       EE  +  L +   FG  +L   +  
Sbjct: 48  FERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFGVLSLLTGNKS 106

Query: 93  -RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
            R  + VA  P  V  L    E   Q +    E+    +   S R  +      +L   D
Sbjct: 107 DRFYHAVAFTP--VELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRD 164

Query: 151 L--RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
           +  R+++ L       + L +  G P        +K S       +  A  + +    V+
Sbjct: 165 MGSRLVSFL-------LILCRDFGVPCADGITIDLKLSH----QAI--AEAIGSTRVTVT 211

>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli} Length = 260

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
           Y     +I QG + +T + I KG V V +K     +E  +  L +GDF GE  L +    
Sbjct: 74  YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQE 132

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
           R+A + A          I  + F QLI    +I  +   + + R +  +E+  +L    +
Sbjct: 133 RSAWVRAKTA--CEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLV 190

Query: 152 --RVITTL 157
             R+  TL
Sbjct: 191 TGRIAQTL 198

>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2 Length = 232

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 26/179 (14%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +K G+ II+ G        + KG++ +      +     I  +        ++L G +  
Sbjct: 48  HKAGETIIKSGNPCTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLIEPQSLFGMNTN 106

Query: 94  -TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
             ++ VA     V  + I +      +   D  R  Y++  S R + L          DL
Sbjct: 107 YASSYVAHTE--VHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDL 164

Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
             ++I             +     P      K       + +DDL  A  +      +S
Sbjct: 165 KSKIIRF----------FLSHCEKPQGEKTFK-------VKMDDL--ARCLDDTRLNIS 204

>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ... Length = 210

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
           Y     +I QG + +T + I KG V V +K     +E  +  L +GDF GE  L +    
Sbjct: 24  YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQE 82

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
           R+A + A          I  + F QLI    +I  +   + + R +  +E+  +L   D+
Sbjct: 83  RSAWVRAKTA--CEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDV 140

Query: 152 --RVITTL 157
             R+  TL
Sbjct: 141 TGRIAQTL 148

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 245 VETRQQQHIMSEKEIMGEA-NCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTIL 297
           V   +++ I  E  ++ +  +   I   Y  F           L+++ME C  G +  ++
Sbjct: 59  VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118

Query: 298 R--DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           +        +    +    ++    +LH   +I+RD+K +N+LL+ +  VKLVDFG + +
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178

Query: 356 L 356
           L
Sbjct: 179 L 179

>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa} Length = 227

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 23/179 (12%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
             +G Y+ RQG     F+ +  G VK+    P   +EK +    + + F E  +      
Sbjct: 37  LDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAEAMMFMDTPN 95

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
             A   A  P          + + + +     +    + + S R  +  +E  +L L + 
Sbjct: 96  YVATAQAVVP--SQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNA 153

Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
             RV+  L       + L   A   +    +        +    +  A  ++  PE  S
Sbjct: 154 THRVVRYL-------LTLAAHAPGENCRVEIP-------VAKQLV--AGHLSIQPETFS 196

>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A Length = 250

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 22/178 (12%), Positives = 51/178 (28%), Gaps = 22/178 (12%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           + +G  +I  G    +   + +GK+K+ +   +   EK +         G+    G    
Sbjct: 37  FAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIGKLYPTG---N 92

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
                A +P         +++   +  + +++  +       +      +   +   +  
Sbjct: 93  NIYATAMEP--TRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPT 150

Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            R++           EL    G          M  SQ      +    I       VS
Sbjct: 151 IRILRLF-------YELCSSQGKRVGDTYEITMPLSQ----KSI--GEITGVHHVTVS 195

>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A* Length = 237

 Score = 76.2 bits (188), Expect = 3e-16
 Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 23/178 (12%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y  G+ +  Q  +     ++  G VK+    P    E  +    +G+ FGE     +   
Sbjct: 39  YDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESFGEAVALRNTPY 97

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
             +  A  P     + I    F  L+    EI    +  T      L  +   L+     
Sbjct: 98  PVSAEAVTP--CEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGA 155

Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            RV   L       +EL            L    K  +        A  +   PE +S
Sbjct: 156 QRVAEFL-------LELCDCDTGACE-VTLP-YDKMLI--------AGRLGMKPESLS 196

>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300} Length = 231

 Score = 75.4 bits (186), Expect = 6e-16
 Identities = 23/126 (18%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           ++  + ++ Q A G+   +++ G V+V+        E+ +  +Y     GE A+     R
Sbjct: 34  FQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGG-RERVLGDIYAPGVVGETAVLAHQER 92

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL-SDL 151
           +A++ A  P  V  L++ +E F  ++     +     +  + R   LN+E  +    ++ 
Sbjct: 93  SASVRALTP--VRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEA 150

Query: 152 RVITTL 157
            +    
Sbjct: 151 ALTHVF 156

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 24/87 (27%), Positives = 45/87 (51%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           IV +    ++    Y++ME   G  L   +   G     T   +T  +++   + H   I
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++RD+KP+N+L+ ++  +K+ DFG AK
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAK 159

>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2 Length = 232

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 6/127 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
            K+   +  +G   +  F + +GK+K+  +          R +  G FFG +    ++  
Sbjct: 38  CKKASTVFSEGDIPNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFFGMRPYFAEETC 96

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
           ++  +A +      L I  E    L+         ++   ++          +L    + 
Sbjct: 97  SSTAIAVEN--SKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVR 154

Query: 152 -RVITTL 157
            R+  TL
Sbjct: 155 GRLAETL 161

>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2 Length = 207

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 10/131 (7%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL----QG 89
           Y     II  G R +T F I KG V + ++  +   E  I  L  GDFFGE  L      
Sbjct: 18  YTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFGELGLFEKEGS 76

Query: 90  DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRL 148
           +  R+A + A          I    F +L     EI      + ++R R+   +   L  
Sbjct: 77  EQERSAWVRAKVE--CEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAF 134

Query: 149 SDL--RVITTL 157
            D+  RV  TL
Sbjct: 135 LDVTGRVARTL 145

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATTRFYTACVVEAFDYLHSRN 326
           IVKLY     KK L ++ E  L  +L  +L   +G  +  T + +   ++    Y H R 
Sbjct: 62  IVKLYDVIHTKKRLVLVFE-HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++  G +K+ DFG A+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           IV L      ++ L ++ E  +  +L  +L +      D+  + Y   ++    + H   
Sbjct: 81  IVSLIDVIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           I++RDLKP+NLL+++ G +KL DFG A+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167

>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2 Length = 213

 Score = 72.6 bits (179), Expect = 4e-15
 Identities = 27/183 (14%), Positives = 63/183 (34%), Gaps = 35/183 (19%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL-QGDDL 92
           +++G+ +  Q    +   I+ +G +K      N  +   I  +          +   +  
Sbjct: 27  FRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQIIASGFIFSSEPR 85

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL 151
              N+VA +      L I +E F  L+    E+   ++ + SE  R ++E+   L    L
Sbjct: 86  FPVNVVAGEN--SKILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTL 143

Query: 152 --RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLD----DLRTANIVAADPE 205
             +++  L                      ++ M + + + L     +L  + +      
Sbjct: 144 REKLMNFL----------------------VRHMNEKRELTLPVTLEEL--SRLFGCARP 179

Query: 206 GVS 208
            +S
Sbjct: 180 ALS 182

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 75.7 bits (186), Expect = 4e-15
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
           IV+++              Y++ME   G  L      K    +A    Y   ++ A  YL
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYL 198

Query: 323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           HS  ++Y DLKPEN++L+    +KL+D G   ++
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRI 231

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 74.2 bits (183), Expect = 5e-15
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           IV L+     +K L ++ E  L  +L   L D GN  +    + +   ++    Y H + 
Sbjct: 62  IVTLHDIIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++  G +KL DFG A+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR 148

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 73.9 bits (182), Expect = 5e-15
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           +   Q+  + E ++M       ++K        K L  + E   GG L  I++   +   
Sbjct: 47  DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106

Query: 306 ATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            + R   A  +     YLHS NII+RDL   N L+  +  V + DFG A+ ++  +  
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 26/87 (29%), Positives = 41/87 (47%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +V ++   +    LY+ M    G +L  +LR +G             +  A D  H+   
Sbjct: 96  VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +RD+KPEN+L+S   +  LVDFG A 
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS 182

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 73.3 bits (181), Expect = 6e-15
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           IV+L+      K L ++ E     +L           D    + +   +++   + HSRN
Sbjct: 63  IVRLHDVLHSDKKLTLVFE-FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +++RDLKP+NLL++ +G +KL +FG A+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR 149

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRN 326
           I+ L   F  K  + ++ +  +  +L  I++D       +  + Y    ++  +YLH   
Sbjct: 74  IIGLLDAFGHKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           I++RDLKP NLLL  +G +KL DFG AK
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK 160

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 73.3 bits (181), Expect = 7e-15
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
           IVKL      +  LY++ E  L  +L   +             + Y   +++   + HS 
Sbjct: 64  IVKLLDVIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +++RDLKP+NLL++T G +KL DFG A+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 72.8 bits (179), Expect = 1e-14
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRN 326
           +V          +L ++   C G  L++++RD     D       A  +V+   YLH++ 
Sbjct: 91  VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150

Query: 327 IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           I+++DLK +N+    +G V + DFG   
Sbjct: 151 ILHKDLKSKNVFY-DNGKVVITDFGLFS 177

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I++L         L+++ E     +L   +    +      + +   ++   ++ HSR  
Sbjct: 95  IIELKSVIHHNHRLHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153

Query: 328 IYRDLKPENLLLSTS-----GYVKLVDFGFAK 354
           ++RDLKP+NLLLS S       +K+ DFG A+
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A* Length = 220

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 31/180 (17%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE--EKYIRTLYKGDFFGEKALQGDD 91
           Y +   +       +  F++  G+V+V +    + E  E  +  L  GD F         
Sbjct: 32  YSKKAILYTPNTERNLVFLVKSGRVRVYL----AYEDKEFTLAILEAGDIFCT------- 80

Query: 92  LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
              A I A +    + L  D   F  ++          V    +  +        L   D
Sbjct: 81  HTRAFIQAMED--TTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKD 138

Query: 151 L--RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
              R+   L       V+     G         ++  +     +++  A ++    + VS
Sbjct: 139 ARLRLAEFL-------VQAAMDTGLKVPQGIKLELGLNT----EEI--ALMLGTTRQTVS 185

>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* Length = 333

 Score = 72.0 bits (176), Expect = 2e-14
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF 81
           ++++           G  ++RQG    +F +IS G  +V+    +      I     G  
Sbjct: 29  LVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDD--GVAIIARALPGMI 86

Query: 82  FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQL 118
            GE AL  D  R+A +   +P  ++     +  F  +
Sbjct: 87  VGEIALLRDSPRSATVTTIEP--LTGWTGGRGAFATM 121

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 281 LYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLL 339
           L ++ + C G  L+  L       +       A       DYLH+++II+RDLK  N+ L
Sbjct: 94  LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153

Query: 340 STSGYVKLVDFGFAK 354
                VK+ DFG A 
Sbjct: 154 HEDNTVKIGDFGLAT 168

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 268 IVKLYKTFKDKKYLYMLMESC---LGG--ELWTILRDKGNFDDATTRFYTACVVEAFDYL 322
           IV+LY     +  L ++ E     L    +  T+       +    +++   +++   + 
Sbjct: 65  IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124

Query: 323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           H   I++RDLKP+NLL++  G +KL DFG A
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLA 155

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           QI    +++  + E   +   N   IVKLY    +   + ++ME   GG L+ +L     
Sbjct: 38  QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEP 95

Query: 303 FD--DATTRFYTA-CVVEAFDYLHSRN---IIYRDLKPENLLLSTSGYV-KLVDFGFAKK 355
                A           +   YLHS     +I+RDLKP NLLL   G V K+ DFG A  
Sbjct: 96  LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155

Query: 356 L 356
           +
Sbjct: 156 I 156

>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1 Length = 222

 Score = 69.6 bits (171), Expect = 4e-14
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 27/178 (15%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           + +G  +       +  F++  G+++V +       E  +  L  GD F           
Sbjct: 28  HAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEE--REISLFYLTSGDMFCM-------HS 78

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
              + A +         D  TF Q + +   +    +                L   D+ 
Sbjct: 79  GCLVEATER--TEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIK 136

Query: 152 -RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
            R+           ++     G  ++   +  +  +     +++  AN++ +  +  S
Sbjct: 137 QRIAGFF-------IDHANTTGRQTQGGVIVSVDFTV----EEI--ANLIGSSRQTTS 181

>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus} Length = 198

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 19  QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
              +  +V       ++  DY+I++G  GD  F I +G V +       ++     +L  
Sbjct: 84  SNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDII-----MSDGVIATSLSD 138

Query: 79  GDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
           G +FGE  L   + R A++        +   +  + FNQ++     +R    +    R
Sbjct: 139 GSYFGEICLLTRERRVASVKCE--TYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVRR 194

>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A* Length = 202

 Score = 68.5 bits (168), Expect = 8e-14
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
              ++ GDYIIR+G  G   + I  G V V       T+      L  G +FGE  L   
Sbjct: 97  FEVFQPGDYIIREGTIGKKMYFIQHGVVSVL------TKGNKEMKLSDGSYFGEICLLTR 150

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEE 142
             RTA++ A          +  + FN+++     +R  +     +R  R+ ++
Sbjct: 151 GRRTASVRAD--TYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKK 201

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 70.4 bits (173), Expect = 8e-14
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 282 YMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
           Y++ME   G  L  I+  +G           A   +A ++ H   II+RD+KP N+++S 
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151

Query: 342 SGYVKLVDFGFAK 354
           +  VK++DFG A+
Sbjct: 152 TNAVKVMDFGIAR 164

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 70.4 bits (173), Expect = 8e-14
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD--DATTRFYTA-CVVEAFDYLHS 324
           IV           L ++ E    G L+ +L   G  +  D   R   A  V +  +YLH+
Sbjct: 96  IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155

Query: 325 RN--IIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           RN  I++R+LK  NLL+     VK+ DFG ++
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187

>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV} Length = 230

 Score = 68.9 bits (169), Expect = 9e-14
 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 12/133 (9%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD-DL 92
           Y     + R G    T + +  G V +  ++ +   E  +     G+F GE  L  + D 
Sbjct: 39  YPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVGEMGLFIESDT 97

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLD-----EIRTKYVDETSER-RRLNEEFRSL 146
           R   +            I  E   QL  +        I      + S+R      +   L
Sbjct: 98  REVILRTRTQ--CELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRL 155

Query: 147 RLSDL--RVITTL 157
              D+  R++ TL
Sbjct: 156 AFLDVTDRIVRTL 168

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
             +    E EI+     D IVK         ++ L ++ME    G L   L+  K   D 
Sbjct: 54  HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                YT+ + +  +YL ++  I+RDL   N+L+     VK+ DFG  K L
Sbjct: 114 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
           E +IM       +V L   F      KD+ +L +++E  +   ++   R     K     
Sbjct: 82  ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE-YVPETVYRASRHYAKLKQTMPM 140

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
              + Y   ++ +  Y+HS  I +RD+KP+NLLL   SG +KL+DFG AK LI
Sbjct: 141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
             +    E EI+     D IVK         ++ L ++ME    G L   L+  K   D 
Sbjct: 85  HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                YT+ + +  +YL ++  I+RDL   N+L+     VK+ DFG  K L
Sbjct: 145 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 10/108 (9%)

Query: 255 SEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC 314
            E  IM   N   IVKLY    +     M+ME    G+L+  L DK +    + +     
Sbjct: 72  REVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML 129

Query: 315 -VVEAFDYLHSRN--IIYRDLKPENLLLSTSGY-----VKLVDFGFAK 354
            +    +Y+ ++N  I++RDL+  N+ L +         K+ DFG ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177

>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus} Length = 160

 Score = 65.4 bits (160), Expect = 4e-13
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 19  QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
            G +  +           GD I   G   D+   +  G ++V        +++ +  L K
Sbjct: 40  DGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVI------QDDEVVAILGK 93

Query: 79  GDFFGEKALQGDDL--RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
           GD FG+   +   L    AN+ A         VI ++   +++         +       
Sbjct: 94  GDVFGDVFWKEATLAQSCANVRALTY--CDLHVIKRDALQKVLEFYTAFSHSFSRNLILT 151

Query: 137 RRLNEE 142
             L + 
Sbjct: 152 YNLRKR 157

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFD 320
           +V+L           +  + ++ E  +  +L T L           T +      +   D
Sbjct: 76  VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +LH+  I++RDLKPEN+L+++ G VKL DFG A+
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 68.6 bits (168), Expect = 6e-13
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 256 EKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTILRD----KGNFDD 305
           E +IM + +   IV+L   F      KD+ YL ++++  +   ++ + R     K     
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD-YVPETVYRVARHYSRAKQTLPV 155

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
              + Y   +  +  Y+HS  I +RD+KP+NLLL   +  +KL DFG AK+L+
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 67.6 bits (166), Expect = 6e-13
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 268 IVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFD 320
           +V+L+          +  L ++ E  +  +L T L           T +     ++   D
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +LHS  +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 67.8 bits (166), Expect = 6e-13
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNF 303
             QQ+    E +I+   + DFIVK         ++ L ++ME    G L   L+  +   
Sbjct: 65  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 124

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           D +    Y++ + +  +YL SR  ++RDL   N+L+ +  +VK+ DFG AK L
Sbjct: 125 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177

>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656} Length = 220

 Score = 66.1 bits (162), Expect = 7e-13
 Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 8/129 (6%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGD--FFGEKALQGDD 91
            K+G  I           ++  G+++  +       E  +  L+  D        +    
Sbjct: 31  VKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMCLLSASCIMRSI 89

Query: 92  LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
                I A         +I  E +  ++     +     +  + R   +      +    
Sbjct: 90  QFEVTIEAEKD--TDLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKS 147

Query: 151 L--RVITTL 157
           L  RV + L
Sbjct: 148 LDKRVASFL 156

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 67.3 bits (165), Expect = 8e-13
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRD-KGNF 303
                 +  E EI+     + IVK     T      + ++ME    G L   L   K   
Sbjct: 64  GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI 123

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +      Y   + +  DYL SR  ++RDL   N+L+ +   VK+ DFG  K +
Sbjct: 124 NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176

>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A Length = 195

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +   + I  +G    T + + +G V+V    P+      +R +  GD+FGE+AL+G    
Sbjct: 4   FARKETIYLRGEEARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFGEEALEGKA-Y 61

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSDL- 151
                A          ++    +       E   +     + + RR+      L+  +L 
Sbjct: 62  RYTAEAMTE--AVVQGLEPRAMDH------EALHRVARNLARQMRRVQAYEAHLQTGELR 113

Query: 152 -RVITTL 157
            R+   L
Sbjct: 114 ARIARYL 120

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKP 334
           FK + Y +M+ME  LG +L  I    G F  +T       +++  +Y+H    ++ D+K 
Sbjct: 121 FKGRSYRFMVME-RLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKA 179

Query: 335 ENLLLSTSGY--VKLVDFGFAKKLIGPR 360
            NLLL       V L D+G + +     
Sbjct: 180 ANLLLGYKNPDQVYLADYGLSYRYCPNG 207

>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B Length = 212

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 10/124 (8%)

Query: 19  QGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYK 78
           +G + ++      +F   G+++IRQG      + +  G ++V        +   +  L K
Sbjct: 88  RGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEV------LKDNTVLAILGK 141

Query: 79  GDFFGEKALQGDDL--RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
           GD  G  +L  + +    AN+ A          I  +   +++    E   K+V E    
Sbjct: 142 GDLIGSDSLTKEQVIKTNANVKAL--TYCDLQYISLKGLREVLRLYPEYAQKFVSEIQHD 199

Query: 137 RRLN 140
              N
Sbjct: 200 LTYN 203

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 65.1 bits (159), Expect = 5e-12
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
            + +     E +I+     + I+K            L ++ME    G L   L  + +  
Sbjct: 74  PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIG 132

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            A    +   + E   YLH+++ I+RDL   N+LL     VK+ DFG AK +
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.4 bits (160), Expect = 6e-12
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
             +   + E  I+ + +   IV+L      K+ +Y++ME   GG+  T LR +G      
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213

Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
           T            +YL S+  I+RDL   N L++    +K+ DFG +++     Y
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 64.2 bits (157), Expect = 9e-12
 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 268 IVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
           I+ L    KD   +   ++ E     +   + +      D   RFY   +++A DY HS 
Sbjct: 93  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSM 149

Query: 326 NIIYRDLKPENLLL-STSGYVKLVDFGFA 353
            I++RD+KP N+++      ++L+D+G A
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.8 bits (156), Expect = 9e-12
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 280 YLYMLMESCLGGELWTILRDKGNFD-DATTRFYTAC-VVEAFDYLHSRN--IIYRDLKPE 335
           +  ++      G L+ +L +  NF  D +     A  +     +LH+    I    L   
Sbjct: 83  HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142

Query: 336 NLLLSTSGYVKLVDFGFAK 354
           ++++      ++       
Sbjct: 143 SVMIDEDMTARISMADVKF 161

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 64.8 bits (158), Expect = 9e-12
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 16/101 (15%)

Query: 268 IVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGN---------FDDATTRFYTACVV 316
           ++ L K F     + +++L +     +LW I++                   +     ++
Sbjct: 80  VISLQKVFLSHADRKVWLLFD-YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138

Query: 317 EAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFA 353
           +   YLH+  +++RDLKP N+L+       G VK+ D GFA
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.3 bits (158), Expect = 1e-11
 Identities = 51/355 (14%), Positives = 107/355 (30%), Gaps = 98/355 (27%)

Query: 25  IVYFSSQTFYKEGD-YIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYI---------R 74
           I+      F    D   ++   +     I+SK ++   +   ++                
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKS----ILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 75  TLYKGDFFGEKALQGD------DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 128
            + +  F  E  L+ +       ++T       P  ++ + I+Q   ++L +        
Sbjct: 77  EMVQ-KFVEE-VLRINYKFLMSPIKTEQR---QPSMMTRMYIEQR--DRLYNDNQVFAKY 129

Query: 129 YVDETSERRRLNEEFRS--LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKS 186
            V     R +   + R   L L   + +   GV G G+  +   A D   S+ ++     
Sbjct: 130 NV----SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV---ALDVCLSYKVQCKMDF 182

Query: 187 QV--MNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQI 244
           ++  +NL +  +   V    + +    ID   +         I+ +     +E RR    
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKL-LYQIDPN-WTSRSDHSSNIKLRIHSIQAELRR---- 236

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
                                          K K Y     E+CL   L  +L +     
Sbjct: 237 -----------------------------LLKSKPY-----ENCL---L--VLLN----- 252

Query: 305 DATTRFYTACVVEAFDYLHSRNIIY-RDLKPENLLLS-TSGYVKLVDF--GFAKK 355
                   A    AF+ L  + ++  R  +  + L + T+ ++ L          
Sbjct: 253 -----VQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus} Length = 202

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 16/129 (12%)

Query: 34  YKEGDYIIRQGARG--DTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD 91
           +K GD I+  G  G  D  + + +G V++            +R +  G FFGE+AL G +
Sbjct: 10  FKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFGEEALFGQE 68

Query: 92  LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSLRLSD 150
            R     AA    V    + +    +L+  L           S+           L    
Sbjct: 69  -RIYFAEAATD--VRLEPLPENPDPELLKDL-------AQHLSQGLAEAYRRIERLATQR 118

Query: 151 L--RVITTL 157
           L  R+   L
Sbjct: 119 LKNRMAAAL 127

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355

 Score = 64.1 bits (156), Expect = 1e-11
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 10/141 (7%)

Query: 2   SKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVT 61
            +N +L         +   V++ IV          G  I R G  GD  F + +G V V 
Sbjct: 224 VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVA 283

Query: 62  MKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISS 121
              P          L  G FFGE AL   + R+A + AA    VS L +    F  L SS
Sbjct: 284 TPNPV--------ELGPGAFFGEMALISGEPRSATVSAATT--VSLLSLHSADFQMLCSS 333

Query: 122 LDEIRTKYVDETSERRRLNEE 142
             EI   +     ERR     
Sbjct: 334 SPEIAEIFRKTALERRGAAAS 354

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 18/115 (15%)

Query: 253 IMSEKEI--MGEANCDFIVKLY--------KTFKDKKYLYMLMESC---LGGELWTILRD 299
           I + +EI  +     + +V L            + K  +Y++ + C   L G    +L +
Sbjct: 61  ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG----LLSN 116

Query: 300 KG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
               F  +  +     ++    Y+H   I++RD+K  N+L++  G +KL DFG A
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTAC-VVEAFDYLHSRN 326
           I+ L      +  L ++ME   GG L  +L  K            A  +    +YLH   
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI--PPDILVNWAVQIARGMNYLHDEA 125

Query: 327 ---IIYRDLKPENLLLSTSGY--------VKLVDFGFAK 354
              II+RDLK  N+L+             +K+ DFG A+
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYM--- 283
           I+      T+                +  +   +   +      +       KYL +   
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHH----KSVIVNPSQNKYLNVIME 118

Query: 284 LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-STS 342
            +   L   L + +R   +        Y   +  A  ++HS  I +RD+KP+NLL+ S  
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178

Query: 343 GYVKLVDFGFAKKLI 357
             +KL DFG AKKLI
Sbjct: 179 NTLKLCDFGSAKKLI 193

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 245 VETRQQQH--IMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
           +E  + +   +  E     +  + D I ++Y      KY  M++E  LG  L  +     
Sbjct: 41  LEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE-LLGPSLEDLFDLCD 99

Query: 302 -NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKK 355
             F   T       ++   +Y+HS+N+IYRD+KPEN L+   G      + ++DF  AK+
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159

Query: 356 LIGPR 360
            I P 
Sbjct: 160 YIDPE 164

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 62.9 bits (153), Expect = 5e-11
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNFDDA 306
           + +  + E  +M E     +V+L      +   Y++ E    G L   LR  ++      
Sbjct: 259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
              +    +  A +YL  +N I+R+L   N L+  +  VK+ DFG ++ + G  Y
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-F 303
             +   Q     +     A C  I  +Y   ++  +  ++++  LG  L  +L   G  F
Sbjct: 45  RRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID-LLGPSLEDLLDLCGRKF 103

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKKLIG 358
              T       ++     +H ++++YRD+KP+N L+          + +VDFG  K    
Sbjct: 104 SVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163

Query: 359 PR 360
           P 
Sbjct: 164 PV 165

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT 307
             +  + E ++M +   + +V+LY     ++ +Y++ E    G L   L+   G +    
Sbjct: 305 SPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 363

Query: 308 TRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
                A  +     Y+   N ++RDL+  N+L+  +   K+ DFG A+ +    Y
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 263 ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDY 321
                I  +     +  Y  M+ME  LG  L  +       F   T       ++   +Y
Sbjct: 62  QGGVGIPTIRWCGAEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120

Query: 322 LHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIGPR 360
           +HS+N I+RD+KP+N L+        V ++DFG AKK    R
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
           ++ + + F  + ++ M  E  L   L+ +++      F     R +   +++  D LH  
Sbjct: 161 VIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219

Query: 326 NIIYRDLKPENLLLSTSGY--VKLVDFG 351
            II+ DLKPEN+LL   G   +K++DFG
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG 247

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 16/95 (16%)

Query: 275 FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACV-------VEAFDYLHSRNI 327
              K Y +M+M+   G +L  I            RF    V       ++  +Y+H    
Sbjct: 121 KNGKSYRFMIMDR-FGSDLQKIYEANAK------RFSRKTVLQLSLRILDILEYIHEHEY 173

Query: 328 IYRDLKPENLLLSTSGY--VKLVDFGFAKKLIGPR 360
           ++ D+K  NLLL+      V LVD+G A +     
Sbjct: 174 VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEG 208

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 254 MSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRF 310
           ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G           
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
           ++  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+    + 
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 272 YKTFKDKKYLYMLMESCLGGELWTILR--DKGNFDDATTRFYTACVVEAFDYLHSRNIIY 329
                  KY ++++   LG  L + L    K    + +       +++A ++LH    ++
Sbjct: 124 GFGVHQDKYRFLVLP-SLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVH 182

Query: 330 RDLKPENLLLSTSGY--VKLVDFGFAKK 355
            ++  EN+ +       V L  +GFA +
Sbjct: 183 GNVTAENIFVDPEDQSQVTLAGYGFAFR 210

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT 308
            +  + E ++M +   + +V+LY     ++ +Y++ E    G L   L+   G +     
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281

Query: 309 RFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
               A  +     Y+   N ++RDL+  N+L+  +   K+ DFG A+ +    Y
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 59.5 bits (144), Expect = 6e-10
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
             ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLA 491

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 58.0 bits (141), Expect = 8e-10
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
             ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+  K + D A
Sbjct: 58  SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLA 116

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +   Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 117 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 58.4 bits (142), Expect = 8e-10
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           +  + I+ E  +M   +   + +L         + ++ +    G L   +R+ K N    
Sbjct: 59  KANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQ 117

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 58.9 bits (142), Expect = 9e-10
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 263 ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDATTRFYTACVVEAFDY 321
                I  +     +  Y  ++M+  LG  L  +           T       ++   ++
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMD-LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118

Query: 322 LHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIGPR 360
           +HS++ ++RD+KP+N L+     +  V ++DFG AKK     
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160

>2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP, cyclic nucleotide, regulation, auto-inhibition, CDC25 homology domain; 2.7A {Mus musculus} Length = 999

 Score = 59.5 bits (143), Expect = 9e-10
 Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 33  FYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEE-KYIRTLYKGDFFGEKALQGDD 91
             ++G  + RQG  G  ++ +  G + V + + +S ++   I TL  G  FGE ++  + 
Sbjct: 69  NLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE-SILDNT 127

Query: 92  LRTANIVAADPEGVSC--LVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSLRLS 149
            R A IV  +        L I+QE F  L     +     +        +     + R+ 
Sbjct: 128 PRHATIVTRES----SELLRIEQEDFKALWEKYRQYMAGLLAPP--YGVMETGSNNDRIP 181

Query: 150 DLRVITTLGVGGFGRVELVQI 170
           D   + +  +   G++  + I
Sbjct: 182 DKENVPSEKILRAGKILRIAI 202

>2byv_E RAP guanine nucleotide exchange factor 4; EPAC2, CAMP-GEF2, CAMP, cyclic nucleotide, regulation, auto-inhibition, CDC25 homology domain; 2.7A {Mus musculus} Length = 999

 Score = 52.9 bits (126), Expect = 9e-08
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           ++  K G  +  QG  G +++II KG V V +       +  + TL++GD FG+ AL  D
Sbjct: 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 417

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
             R A+IV  + +    L +D+E FN+++  + E  T  + E  +
Sbjct: 418 APRAASIVLRE-DNCHFLRVDKEDFNRILRDV-EANTVRLKEHDQ 460

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR--DKGNFD 304
           +   +  ++E  +M     D +VKL+     K+ +Y++ E    G L   L+  +     
Sbjct: 224 SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQP 282

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
                 ++A + E   ++  RN I+RDL+  N+L+S S   K+ DFG A+ +    Y
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 254 MSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTRF 310
           ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G           
Sbjct: 62  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           ++  V EA +YL   N ++RDL   N+L+S     K+ DFG  K
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           +Q+   + E  IMG+ +   I++L       K + ++ E    G L   LR+  G F   
Sbjct: 88  KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 147

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL + N ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 1/109 (0%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
             E + M + +   +VK Y     +  +Y++ E    G L   LR  G   + +      
Sbjct: 51  FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110

Query: 314 C-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
             V E   +L S   I+RDL   N L+     VK+ DFG  + ++  +Y
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           RQ++  +SE  IMG+ +   I++L       +   ++ E    G L T LR   G F   
Sbjct: 92  RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   V     YL     ++RDL   N+L+ ++   K+ DFG ++ L
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 14/95 (14%)

Query: 268 IVKLY--------KTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEA 318
           +VK+         + F +  Y+ + + +S    +   + R      +   +     ++  
Sbjct: 114 VVKVLDIVIPKDVEKFDEL-YVVLEIADS----DFKKLFRTPVYLTELHIKTLLYNLLVG 168

Query: 319 FDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
             Y+HS  I++RDLKP N L++    VK+ DFG A
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
            +  Q +      +G  +   IV+L         L ++ +    G L   +R  +G    
Sbjct: 56  RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGP 114

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                +   + +   YL    +++R+L   N+LL +   V++ DFG A  L
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 272 YKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRD 331
            + F+D   +Y++ME  +   L  +++     D     +    ++    +LHS  II+RD
Sbjct: 136 LEEFQD---VYLVME-LMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189

Query: 332 LKPENLLLSTSGYVKLVDFGFAKKL 356
           LKP N+++ +   +K++DFG A+  
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTA 214

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           +   +  +++E  +M + +  +IV++    + +    ++ME    G L   L+   +  D
Sbjct: 58  DPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD 116

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                    V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           +Q++  + E  IMG+ +   I++L       K + ++ E    G L + LR     F   
Sbjct: 88  KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL     ++RDL   N+L++++   K+ DFG  + L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDATT 308
           ++  + E E+M + +   +V+LY    ++  + ++ E    G L   LR  +G F   T 
Sbjct: 47  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
                 V E   YL    +I+RDL   N L+  +  +K+ DFG  + ++  +Y
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFDDATTRFY 311
           + E  +M E     +V+L      +   Y++ E    G L   LR+  +         + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116

Query: 312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
              +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           + E ++M   + + +V+LY     ++ ++++ E    G L   LR+  +           
Sbjct: 67  IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126

Query: 314 C-VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
             V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 2/111 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
            +    ++E  IM + +   ++ L     + +    +++     G+L   +R+   N   
Sbjct: 68  GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 127

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                +   V +   YL S+  ++RDL   N +L     VK+ DFG A+ +
Sbjct: 128 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           +  + I+ E  +M   +   + +L         + ++ +    G L   +R+ K N    
Sbjct: 59  KANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQ 117

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD 304
           +       + E   M   +   +++LY        + M+ E    G L   LR  +G+F 
Sbjct: 61  QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL 119

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ DFG  + L
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
            + F D  YL M  M++    +L  I+     F +   ++    +++   Y+HS  +++R
Sbjct: 98  LRNFYDF-YLVMPFMQT----DLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHR 150

Query: 331 DLKPENLLLSTSGYVKLVDFGFAK 354
           DLKP NL ++    +K++DFG A+
Sbjct: 151 DLKPGNLAVNEDCELKILDFGLAR 174

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 13/103 (12%)

Query: 268 IVKLYKTF-------KDKKYLYM---LMESCLGGELWTILRDKGNFDDATTRFYTACVVE 317
           IV+L   F       +   YL +    +   L        R +        + +   ++ 
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140

Query: 318 AFDYLH--SRNIIYRDLKPENLLL-STSGYVKLVDFGFAKKLI 357
           +   LH  S N+ +RD+KP N+L+    G +KL DFG AKKL 
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 55.9 bits (135), Expect = 6e-09
 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 2/111 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
            +    ++E  IM + +   ++ L     + +    +++     G+L   +R+   N   
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 191

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                +   V +   +L S+  ++RDL   N +L     VK+ DFG A+ +
Sbjct: 192 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 7/88 (7%)

Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
                 +  KD  Y+   LME+    +L+ +L+   +  +    ++   ++    Y+HS 
Sbjct: 94  IRAPTIEQMKDV-YIVQDLMET----DLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA 147

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           N+++RDLKP NLLL+T+  +K+ DFG A
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLA 175

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILR-DKGNFDDATTRFYTACVVEAFDYLHS 324
           F+           YL   LM +    +L  ++   +        +++   ++     LH 
Sbjct: 98  FVHFEEPAMHKL-YLVTELMRT----DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE 152

Query: 325 RNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
             +++RDL P N+LL+ +  + + DF  A
Sbjct: 153 AGVVHRDLHPGNILLADNNDITICDFNLA 181

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD 305
           +Q +  + E  +M   N   ++ L       +   ++L+     G+L   +R  + N   
Sbjct: 64  QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                +   V    +YL  +  ++RDL   N +L  S  VK+ DFG A+ +
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 55.8 bits (135), Expect = 7e-09
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
              F D  YL M  M +    +L  +++ +    +   +F    +++   Y+H+  II+R
Sbjct: 99  LDDFTDF-YLVMPFMGT----DLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152

Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
           DLKP NL ++    +K++DFG A
Sbjct: 153 DLKPGNLAVNEDCELKILDFGLA 175

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
             ++  MSE  IM   +   IVKL     +++  +++ME    GEL   L   K +    
Sbjct: 55  DNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL 113

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           T   Y+  + +A  YL S N ++RD+   N+L+++   VKL DFG ++ +
Sbjct: 114 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 56.1 bits (135), Expect = 8e-09
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
              + +M E +IM + +  +IV+L    + +  L ++ME   GG L   L   +     +
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVS 436

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   V     YL  +N ++R+L   N+LL    Y K+ DFG +K L
Sbjct: 437 NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 267 FIVKLYKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
            I      F +  Y+ + + +S    +L  + +      +   +     ++   +++H  
Sbjct: 94  IIPDDLLKFDEL-YIVLEIADS----DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            II+RDLKP N LL+    VK+ DFG A
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLA 176

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLY------KTFKDKKYLYMLMESCLGGELWTILRDKG 301
              +  + E   M E +   + KL       +         +++     G+L   L    
Sbjct: 67  SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126

Query: 302 NFDDATT------RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
             ++           +   +    +YL SRN I+RDL   N +L+    V + DFG ++K
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186

Query: 356 L 356
           +
Sbjct: 187 I 187

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
            + F D  YL   LM +    +L  I++ +    D   +F    ++    Y+HS +II+R
Sbjct: 103 LEEFNDV-YLVTHLMGA----DLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHR 156

Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
           DLKP NL ++    +K++DFG A
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLA 179

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 10/119 (8%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
           R++   ++E  +M E NC  +V+L       +   ++ME    G+L + LR         
Sbjct: 70  RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129

Query: 308 TRFYTACVVE----AFD------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                  + +    A +      YL++   ++RDL   N +++    VK+ DFG  + +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
            + +   + E  I+ + N   IV+           ++LME   GG+L + LR+       
Sbjct: 74  EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133

Query: 307 TTRFYTACVVE-AFD------YLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
            +      ++  A D      YL   + I+RD+   N LL+  G     K+ DFG A+ +
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 8/83 (9%)

Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
            + F+D  Y+ M LM++     L  +++     D     +    ++    +LHS  II+R
Sbjct: 99  LEEFQDV-YIVMELMDA----NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHR 151

Query: 331 DLKPENLLLSTSGYVKLVDFGFA 353
           DLKP N+++ +   +K++DFG A
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLA 174

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 27/133 (20%)

Query: 244 IVETRQQQHIMSEKEI--MGEANCDFIVKLY----KTFKDKKYLYMLMESCLGGELWTIL 297
           I  +R+++    E EI        + I+       K       L+++ +    G L+  L
Sbjct: 72  IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131

Query: 298 RDKGNFDDATTRFYTACVVEAFD------YLHSR--------NIIYRDLKPENLLLSTSG 343
                    T        + A        +LH           I +RDLK +N+L+  +G
Sbjct: 132 NRY------TVTVEGMIKL-ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184

Query: 344 YVKLVDFGFAKKL 356
              + D G A + 
Sbjct: 185 TCCIADLGLAVRH 197

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
           IV L + F  + +L ++ E  L   L+ +LR+          TR +   +  A  +L + 
Sbjct: 118 IVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176

Query: 326 --NIIYRDLKPENLLLSTSGY--VKLVDFGFA 353
             +II+ DLKPEN+LL       +K+VDFG +
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 2/86 (2%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           + ++      +    ++ E   GG L  +     +   A        +  A D  H   +
Sbjct: 93  VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIR--AMQSLAAAADAAHRAGV 150

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFA 353
                 P  + +S  G V L      
Sbjct: 151 ALSIDHPSRVRVSIDGDVVLAYPATM 176

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
            + +   + E  I+ + N   IV+           ++L+E   GG+L + LR+       
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174

Query: 307 TTRFYTACVVE-AFD------YLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL 356
            +      ++  A D      YL   + I+RD+   N LL+  G     K+ DFG A+ +
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
            V++ + F+   ++ ++ E  LG   +  +++ G   F     R     + ++ ++LHS 
Sbjct: 79  CVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137

Query: 326 NIIYRDLKPENLLLSTSGY-------------------VKLVDFG 351
            + + DLKPEN+L   S Y                   +K+VDFG
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182

>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus} Length = 694

 Score = 54.1 bits (129), Expect = 4e-08
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 31  QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD 90
           ++  K G  +  QG  G +++II KG V V +       +  + TL++GD FG+ AL  D
Sbjct: 58  ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGKLALVND 112

Query: 91  DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
             R A+IV  + +    L +D+E FN+++  ++    +  +   +
Sbjct: 113 APRAASIVLRE-DNCHFLRVDKEDFNRILRDVEANTVRLKEHDQD 156

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 16/125 (12%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
             ++    E  +        +V L       + L M+   C  G+L   L  +    D  
Sbjct: 54  PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113

Query: 308 TRFYTACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
           +      V  A +                YL S +++++DL   N+L+     VK+ D G
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 173

Query: 352 FAKKL 356
             +++
Sbjct: 174 LFREV 178

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
              + +M E +IM + +  +IV+L    + +  L ++ME   GG L   L   +     +
Sbjct: 52  ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVS 110

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   V     YL  +N ++RDL   N+LL    Y K+ DFG +K L
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
           YLHS  +++RD+KP N+LL+   +VK+ DFG +
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 25/132 (18%)

Query: 244 IVETRQQQHIMSEKEIMGEANC--DFIVKLY----KTFKDKKYLYMLMESCLGGELWTIL 297
           I  +R ++    E E+        + I+        +      L+++      G L+  L
Sbjct: 38  IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97

Query: 298 RDKGNFDDATTRFYTAC-----VVEAFDYLHSR--------NIIYRDLKPENLLLSTSGY 344
           +        T    +       +     +LH           I +RDLK +N+L+  +G 
Sbjct: 98  QLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ 151

Query: 345 VKLVDFGFAKKL 356
             + D G A   
Sbjct: 152 CCIADLGLAVMH 163

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 22/105 (20%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
            V +   F    ++ +  E  LG   +  L++     +     R     +  A  +LH  
Sbjct: 84  CVLMSDWFNFHGHMCIAFE-LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN 142

Query: 326 NIIYRDLKPENLLLSTSGY-------------------VKLVDFG 351
            + + DLKPEN+L   S +                   +++ DFG
Sbjct: 143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 272 YKTFKDKKYLYM-LMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYR 330
                   Y+    ME+    +L  +L  +G   +   R +   ++    Y+HS N+++R
Sbjct: 91  LTELNSV-YIVQEYMET----DLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSANVLHR 144

Query: 331 DLKPENLLLSTSGY-VKLVDFGFA 353
           DLKP NL ++T    +K+ DFG A
Sbjct: 145 DLKPANLFINTEDLVLKIGDFGLA 168

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
            LH  N+I+RDLKP NLL++++  +K+ DFG A
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 52.3 bits (126), Expect = 7e-08
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLY-----KTFKDKKYLYMLMESCLGGELWTILR--- 298
            R+ +  +SE   M + +   +++L       + +      +++     G+L T L    
Sbjct: 77  QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR 136

Query: 299 ---DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
                 +    T   +   +    +YL +RN ++RDL   N +L     V + DFG +KK
Sbjct: 137 LETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196

Query: 356 L 356
           +
Sbjct: 197 I 197

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 52.0 bits (125), Expect = 9e-08
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 256 EKEIMGEANC--DFIVKLY----KTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
           E EI        + I+       K       LY++ +    G L+  L+     D  +  
Sbjct: 79  ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSML 137

Query: 310 FYTACVVEAFDYLHSRN--------IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                 V    +LH+          I +RDLK +N+L+  +G   + D G A K 
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 16/125 (12%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
             ++    E E++     + IVK Y    D   L M+ E    G+L   LR  G      
Sbjct: 59  AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118

Query: 308 TRFYTACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
                                        YL S++ ++RDL   N L+  +  VK+ DFG
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178

Query: 352 FAKKL 356
            ++ +
Sbjct: 179 MSRDV 183

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 254 MSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRDKG--NFDDATTR 309
           ++E  +M +     +V+LY   T   ++ +Y++ E    G L   L+             
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
              A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+ +    Y
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
              +Q    E E++       IV+ +    + + L M+ E    G+L   LR  G     
Sbjct: 84  ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143

Query: 307 TTRFYTACVVE---------AFD------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFG 351
                               A        YL   + ++RDL   N L+     VK+ DFG
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 203

Query: 352 FAKKL 356
            ++ +
Sbjct: 204 MSRDI 208

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 9/119 (7%)

Query: 247 TRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA 306
               +       +M + +   +V  Y          ++ E    G L T L+   N  + 
Sbjct: 53  RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINI 112

Query: 307 TTRFYTAC-VVEAFDYLHSRNIIYRDLKPENLLLSTSGY--------VKLVDFGFAKKL 356
             +   A  +  A  +L    +I+ ++  +N+LL             +KL D G +  +
Sbjct: 113 LWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 24/128 (18%)

Query: 254 MSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA 313
           +SE  ++ + N   ++KLY        L +++E    G L   LR+             +
Sbjct: 74  LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133

Query: 314 CVVEAFD------------------------YLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
               + D                        YL    +++RDL   N+L++    +K+ D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193

Query: 350 FGFAKKLI 357
           FG ++ + 
Sbjct: 194 FGLSRDVY 201

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 19/136 (13%)

Query: 244 IVETRQQQHIMSEKEIMGEA--NCDFIVKLY-----KTFKDKKYLYMLMESCLGGELWTI 296
           +     +Q+ ++EK I        D I +        T   +    ++ME    G L   
Sbjct: 43  VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKY 102

Query: 297 LRDKGNFDDATTRFYTAC-VVEAFDYLHS---------RNIIYRDLKPENLLLSTSGYVK 346
           L    +  D  +    A  V     YLH+           I +RDL   N+L+   G   
Sbjct: 103 LSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160

Query: 347 LVDFGFAKKLIGPRYS 362
           + DFG + +L G R  
Sbjct: 161 ISDFGLSMRLTGNRLV 176

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 15/115 (13%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           MSE +IM      + IV L         + ++ E C  G+L   LR K    +    F  
Sbjct: 97  MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156

Query: 313 --------------ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA 353
                         + V +   +L S+N I+RD+   N+LL+     K+ DFG A
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 19/122 (15%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           MSE +++        IV L           ++ E C  G+L   LR K +    +     
Sbjct: 74  MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133

Query: 313 ACVVEAF------------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
               +                     +L S+N I+RDL   N+LL+     K+ DFG A+
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 193

Query: 355 KL 356
            +
Sbjct: 194 DI 195

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 66/216 (30%)

Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
            ++  LG G F  V L +                       D+     VA        +V
Sbjct: 22  ILVRKLGWGHFSTVWLAK-----------------------DMVNNTHVAM------KIV 52

Query: 212 IDQETFNQLISSLDEIRT-KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK 270
              + + +  ++ DEI+  + V++    +                          + I+K
Sbjct: 53  RGDKVYTE--AAEDEIKLLQRVNDADNTKEDSM--------------------GANHILK 90

Query: 271 LYKTFK----DKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHS 324
           L   F     +  ++ M+ E  LG  L  +++   +        +  +  ++   DY+H 
Sbjct: 91  LLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 149

Query: 325 R-NIIYRDLKPENLLLSTSGY------VKLVDFGFA 353
           R  II+ D+KPEN+L+           +K+ D G A
Sbjct: 150 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 28/111 (25%)

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVEAFDYLHSR 325
           IVK +  F    ++ ++ E  LG  L+ I+       F     + Y   +++A +YL   
Sbjct: 98  IVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156

Query: 326 NIIYRDLKPENLLLSTSGY-------------------------VKLVDFG 351
           ++ + DLKPEN+LL    +                         +KL+DFG
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 28/133 (21%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
             Q     E  +M E +   IVKL       K + +L E    G+L   LR        +
Sbjct: 92  DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 151

Query: 308 TRFYTACVVEAFD------------------------YLHSRNIIYRDLKPENLLLSTSG 343
                                                YL  R  ++RDL   N L+  + 
Sbjct: 152 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 211

Query: 344 YVKLVDFGFAKKL 356
            VK+ DFG ++ +
Sbjct: 212 VVKIADFGLSRNI 224

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 46/234 (19%), Positives = 84/234 (35%), Gaps = 38/234 (16%)

Query: 149 SDLRVITTLGVGGFGRV---ELVQIAGDPSRS-FALKQMKK--SQVMNLDDLRTA----- 197
             L++   LG G FG+V   +   I    +    A+K +K+  +   +   +        
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 198 -----NIVAA-----DPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVET 247
                N+V        P G   ++++   F  L + L   R ++V   +           
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT----------- 130

Query: 248 RQQQHIMSEKEIMGEANCDFIVKL-----YKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
            +       K+ +G    D   +L      ++     ++     S +  E       K  
Sbjct: 131 -KGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DFG A+ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 18/121 (14%)

Query: 254 MSEKEIMGEANC-DFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY 311
           MSE +I+        +V L     K    L +++E C  G L T LR K N         
Sbjct: 78  MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137

Query: 312 TACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
                +                  ++L SR  I+RDL   N+LLS    VK+ DFG A+ 
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197

Query: 356 L 356
           +
Sbjct: 198 I 198

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           +LH  + I+RD+K  N+LL  +   K+ DFG A+
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 181

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +SE E+M        I+ L         LY+++E    G L   L+ +       +   +
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181

Query: 313 ----------------ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                             V    +YL S+  I+RDL   N+L++    +K+ DFG A+ +
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 17/119 (14%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +SE E+M        I+ L         LY+++E    G L   LR +       +    
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193

Query: 313 ACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
               E                  +YL S+  I+RDL   N+L++ +  +K+ DFG A+ 
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 46.0 bits (110), Expect = 8e-06
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 321 YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           YLH+R II+RD+K  N+LL  +   K+ DFG +K
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.1 bits (110), Expect = 9e-06
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 17/120 (14%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           +SE E+M        I+ L         LY+++E    G L   LR +       +    
Sbjct: 88  VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147

Query: 313 ACVVEAFD----------------YLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
               E                   YL S+  I+RDL   N+L++ +  +K+ DFG A+ +
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 10/46 (21%)

Query: 321 YLHSR----------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           YLH             I +RD+K +N+LL  +    + DFG A K 
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
             E E++ +      I+ L    + + YLY+ +E    G L   LR     +        
Sbjct: 73  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132

Query: 313 ACVVEAF----------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
                                  DYL  +  I+RDL   N+L+  +   K+ DFG ++ 
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 254 MSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT 312
           MSE ++M +    + IV L         +Y++ E C  G+L   LR K          Y 
Sbjct: 96  MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155

Query: 313 ACVVEAF-----------------------DYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
                                         ++L  ++ ++RDL   N+L++    VK+ D
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215

Query: 350 FGFAKKLI 357
           FG A+ ++
Sbjct: 216 FGLARDIM 223

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 264 NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDKGN--FDDATTRFYTACVVE 317
           N + +V+L   FK       ++ M+ E  LG  L   +             +     V++
Sbjct: 99  NREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157

Query: 318 AFDYLHSR-NIIYRDLKPENLLLS 340
             DYLH++  II+ D+KPEN+LLS
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILLS 181

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 17/209 (8%)

Query: 149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVS 208
             L+    +G G FG V             A+K +     +   DL   +      E + 
Sbjct: 20  EKLQRCEKIGEGVFGEVFQTI---ADHTPVAIKIIA----IEGPDLVNGSHQKTFEEILP 72

Query: 209 CLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI 268
            ++I +E    L+S     RT+          +   V+      ++   +          
Sbjct: 73  EIIISKEL--SLLSGEVCNRTEGFIGL----NSVHCVQGSYPPLLLKAWDHYNSTKGSAN 126

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR-NI 327
            +      D+ ++ +  E   G +L  +     +   A +  +   +  +     +    
Sbjct: 127 DRPDFFKDDQLFIVLEFEFG-GIDLEQMRTKLSSLATAKSILH--QLTASLAVAEASLRF 183

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            +RDL   N+LL  +   KL      K  
Sbjct: 184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSS 212

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 321 YLH---SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           YLH      II+RD+K  N+LL       + DFG AK
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	362
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.95
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.95
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.94
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
3bhy_A	283	Death-associated protein kinase 3; death associate	99.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.94
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.93
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.93
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.93
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.93
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.93
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.93
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.93
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.93
3tnp_B	416	CAMP-dependent protein kinase type II-beta regula	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.93
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.93
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.93
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.92
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.92
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.92
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.92
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.92
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.92
4din_B	381	CAMP-dependent protein kinase type I-beta regulat	99.92
3shr_A	299	CGMP-dependent protein kinase 1; cyclic nucleotide	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.92
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
3of1_A	246	CAMP-dependent protein kinase regulatory subunit;	99.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.92
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.92
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.92
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.92
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.92
2qcs_B	291	CAMP-dependent protein kinase type I-alpha regula	99.92
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.91
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.91
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.91
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.91
3mdp_A	142	Cyclic nucleotide-binding domain (CNMP-BD) protei;	99.91
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.91
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.9
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.9
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.9
3idb_B	161	CAMP-dependent protein kinase type II-beta regulat	99.88
2pqq_A	149	Putative transcriptional regulator; APC7345, strep	99.88
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.88
3gyd_A	187	CNMP-BD protein, cyclic nucleotide-binding domain;	99.87
2z69_A	154	DNR protein; beta barrel, dimerization helix, tran	99.87
4f7z_A	999	RAP guanine nucleotide exchange factor 4; cyclic n	99.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.86
4ev0_A	216	Transcription regulator, CRP family; CAMP binding,	99.86
3dn7_A	194	Cyclic nucleotide binding regulatory protein; stru	99.86
3e97_A	231	Transcriptional regulator, CRP/FNR family; YP_6044	99.86
1zyb_A	232	Transcription regulator, CRP family; NP_813211.1,	99.86
3ocp_A	139	PRKG1 protein; serine/threonine kinase, TF2I and I	99.85
3d0s_A	227	Transcriptional regulatory protein; CAMP receptor	99.85
3fx3_A	237	Cyclic nucleotide-binding protein; helix_TURN_heli	99.85
4f8a_A	160	Potassium voltage-gated channel subfamily H membe;	99.85
3dv8_A	220	Transcriptional regulator, CRP/FNR family; cyclic	99.85
2ptm_A	198	Hyperpolarization-activated (IH) channel; ION chan	99.84
3iwz_A	230	CAP-like, catabolite activation-like protein; XCC,	99.84
1wgp_A	137	Probable cyclic nucleotide-gated ION channel 6; cy	99.84
3ukn_A	212	Novel protein similar to vertebrate potassium VOL	99.84
3pna_A	154	CAMP-dependent protein kinase type I-alpha regula	99.84
1vp6_A	138	CNBD, cyclic-nucleotide binding domain of mesorhiz	99.84
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.83
3dkw_A	227	DNR protein; CRP-FNR, HTH, beta barrel, dimerizati	99.83
2gau_A	232	Transcriptional regulator, CRP/FNR family; structu	99.83
4ava_A	333	Lysine acetyltransferase; allosteric regulation, d	99.83
1o7f_A	469	CAMP-dependent RAP1 guanine-nucleotide exchange fa	99.83
3shr_A	299	CGMP-dependent protein kinase 1; cyclic nucleotide	99.82
2qcs_B	291	CAMP-dependent protein kinase type I-alpha regula	99.82
3bpz_A	202	Potassium/sodium hyperpolarization-activated cycli	99.82
3ryp_A	210	Catabolite gene activator; CAMP receptor protein (	99.81
2oz6_A	207	Virulence factor regulator; winged helix, helix-tu	99.81
4din_B	381	CAMP-dependent protein kinase type I-beta regulat	99.8
3kcc_A	260	Catabolite gene activator; helix-turn-helix, CAMP,	99.79
3of1_A	246	CAMP-dependent protein kinase regulatory subunit;	99.78
2fmy_A	220	COOA, carbon monoxide oxidation system transcripti	99.78
1o5l_A	213	Transcriptional regulator, CRP family; TM1171, str	99.78
3tnp_B	416	CAMP-dependent protein kinase type II-beta regula	99.78
2d93_A	134	RAP guanine nucleotide exchange factor 6; CNMP_bin	99.78
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.76
1ft9_A	222	Carbon monoxide oxidation system transcription reg	99.76
3e6c_C	250	CPRK, cyclic nucleotide-binding protein; CPRK, hal	99.75
2bgc_A	238	PRFA; bacterial infection, human pathogen, transcr	99.74
3la7_A	243	Global nitrogen regulator; activator, DNA-binding,	99.72
1o7f_A	469	CAMP-dependent RAP1 guanine-nucleotide exchange fa	99.7
3b02_A	195	Transcriptional regulator, CRP family; structural	99.66
4f7z_A	999	RAP guanine nucleotide exchange factor 4; cyclic n	99.64
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	99.63
3cf6_E	694	RAP guanine nucleotide exchange factor (GEF) 4; EP	99.62
2zcw_A	202	TTHA1359, transcriptional regulator, FNR/CRP famil	99.57
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.39
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.26
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.15
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.73
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.56
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.55
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.45
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.35
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.07
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.05
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.02
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.01
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.65
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.56
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.29
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.99
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.88
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.87
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.66
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.63
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.61
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.47
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.94
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.85
3mes_A	424	Choline kinase; malaria, structural genomics, stru	94.48
3idb_B	161	CAMP-dependent protein kinase type II-beta regulat	92.07
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	89.9
3rns_A	227	Cupin 2 conserved barrel domain protein; structura	86.62
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	85.36
3fjs_A	114	Uncharacterized protein with RMLC-like cupin fold;	83.27
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	82.19
1dgw_A	178	Canavalin; duplicated swiss-roll beta barrels, loo	80.52

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.3e-38  Score=283.65  Aligned_cols=154  Identities=39%  Similarity=0.658  Sum_probs=140.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.||+|++.+...                                      
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~-~~~~~~AiK~i~k~~~--------------------------------------   70 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHI--------------------------------------   70 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH--------------------------------------
T ss_pred             CccccEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEEHHHC--------------------------------------
Confidence            4578999999999999999999965 5688999999976421                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ......+.+.+|+++|+.++||||++++++|++++.+|+|||||+||+|.+++.+.+.+++.
T Consensus        71 ------------------~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~  132 (311)
T 4aw0_A           71 ------------------IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET  132 (311)
T ss_dssp             ------------------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHH
T ss_pred             ------------------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHH
Confidence                              11223466899999999999999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.
T Consensus       133 ~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            999999999999999999999999999999999999999999999999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.3e-36  Score=279.81  Aligned_cols=153  Identities=25%  Similarity=0.513  Sum_probs=130.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++++.||+|+||.||++.+. .+++.||+|++.+..                                       
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~---------------------------------------   61 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISR---------------------------------------   61 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEET-TTCCEEEEEEEECTT---------------------------------------
T ss_pred             cccceEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHH---------------------------------------
Confidence            3689999999999999999999965 568899999987541                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~  304 (362)
                                        ........+.+|+.+|+.++||||+++++++.+++.+|||||||+||+|.+++...+  .++
T Consensus        62 ------------------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~  123 (350)
T 4b9d_A           62 ------------------MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ  123 (350)
T ss_dssp             ------------------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCC
T ss_pred             ------------------CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCC
Confidence                              112234678899999999999999999999999999999999999999999997543  479


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.
T Consensus       124 e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          124 EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            99999999999999999999999999999999999999999999999998764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.7e-36  Score=270.82  Aligned_cols=154  Identities=30%  Similarity=0.531  Sum_probs=129.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.||+|++.+..                                       
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~---------------------------------------   50 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHT-TTGQKVALKIINKKV---------------------------------------   50 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECT-TTCCEEEEEEEECC----------------------------------------
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEeHHH---------------------------------------
Confidence            4689999999999999999999854 568899999987641                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       ........++.+|+.+|+.++||||+++++++.+++.+|+||||+ +|+|.+++.+.+++++.
T Consensus        51 -----------------~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~  112 (275)
T 3hyh_A           51 -----------------LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQ  112 (275)
T ss_dssp             ----------------------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHH
T ss_pred             -----------------cCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHH
Confidence                             112223456889999999999999999999999999999999999 78999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       113 ~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A          113 EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            9999999999999999999999999999999999999999999999987643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.3e-36  Score=275.35  Aligned_cols=153  Identities=40%  Similarity=0.662  Sum_probs=131.0

Q ss_pred             ccCcEEEEEecccceecEEEEEec--CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIA--GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -++|++++.||+|+||.||++++.  +.+++.||+|++.+...                                     
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-------------------------------------   65 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-------------------------------------   65 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE-------------------------------------
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc-------------------------------------
Confidence            468999999999999999999864  34578899999876421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                          ......++.+|+.+|+.++||||+++++++.+++.+|+|||||+||+|.+++.+.+.+++
T Consensus        66 --------------------~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e  125 (304)
T 3ubd_A           66 --------------------KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE  125 (304)
T ss_dssp             --------------------EEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCH
T ss_pred             --------------------ChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCH
Confidence                                111123467899999999999999999999999999999999999999999998889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus       126 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          126 EDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            9999999999999999999999999999999999999999999999998653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=9.3e-36  Score=273.77  Aligned_cols=150  Identities=26%  Similarity=0.452  Sum_probs=135.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|++.+.||+|+||.||++.+. .+++.||+|.+.+.+                                        
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~----------------------------------------  111 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRK----------------------------------------  111 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             hHhcEEeEEeecCcCeEEEEEEEC-CCCCEEEEEEEecCc----------------------------------------
Confidence            356999999999999999999965 568899999986431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ....+.+.+|+.+|+.++||||++++++|.+++.+|||||||+||+|.+++.+ +.+++..
T Consensus       112 -------------------~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~  171 (346)
T 4fih_A          112 -------------------QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQ  171 (346)
T ss_dssp             -------------------CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHH
T ss_pred             -------------------hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHH
Confidence                               11234578999999999999999999999999999999999999999999876 5799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       172 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            999999999999999999999999999999999999999999999998754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-35  Score=272.06  Aligned_cols=147  Identities=26%  Similarity=0.426  Sum_probs=132.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .++.|.+.+.||+|+||.||++.+. .+++.||+|.+.+..                                       
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~-~~g~~vAiK~i~~~~---------------------------------------   95 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDK-QTGFQCAVKKVRLEV---------------------------------------   95 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTT---------------------------------------
T ss_pred             chhheEeCcEeccCCCeEEEEEEEC-CCCCEEEEEEECHHH---------------------------------------
Confidence            3567899999999999999999955 568899999985431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                               ...+|+.+|+.++|||||++++++.+++.+||||||++||+|.+++++.+++++.
T Consensus        96 -------------------------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~  150 (336)
T 4g3f_A           96 -------------------------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED  150 (336)
T ss_dssp             -------------------------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHH
T ss_pred             -------------------------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHH
Confidence                                     1246999999999999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~  358 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+| .+||+|||+|+.+..
T Consensus       151 ~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          151 RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence            9999999999999999999999999999999999887 699999999987643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4.2e-35  Score=275.94  Aligned_cols=150  Identities=26%  Similarity=0.452  Sum_probs=135.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|++++.||+|+||.||++.+. .+++.||+|.+....                                        
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~----------------------------------------  188 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRK----------------------------------------  188 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESTT----------------------------------------
T ss_pred             hHhcEeeeEeccCcCcEEEEEEEC-CCCCEEEEEEEeccc----------------------------------------
Confidence            356999999999999999999965 568899999986431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ....+.+.+|+.+|+.++||||++++++|.+++.+|||||||+||+|.+++.. +.+++..
T Consensus       189 -------------------~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~  248 (423)
T 4fie_A          189 -------------------QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQ  248 (423)
T ss_dssp             -------------------CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHH
T ss_pred             -------------------hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHH
Confidence                               11234578999999999999999999999999999999999999999999875 5799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       249 ~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            999999999999999999999999999999999999999999999998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=8.3e-35  Score=263.73  Aligned_cols=154  Identities=23%  Similarity=0.390  Sum_probs=132.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      +.-++|.+.+.||+|+||.||++.+.+    .++..||+|.+...                                   
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----------------------------------   54 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----------------------------------   54 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-----------------------------------
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-----------------------------------
Confidence            345789999999999999999998643    34678999988542                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                              .....+.+.+|+.+|+.++||||+++++++.+++.+|+||||+++|+|.+++.+. 
T Consensus        55 ------------------------~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~  110 (299)
T 4asz_A           55 ------------------------SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG  110 (299)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTS
T ss_pred             ------------------------ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcC
Confidence                                    1223456899999999999999999999999999999999999999999999753 


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 ------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                  ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  180 (299)
T 4asz_A          111 PDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS  180 (299)
T ss_dssp             HHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred             cccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCC
Confidence                        3589999999999999999999999999999999999999999999999999986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.4e-34  Score=259.13  Aligned_cols=150  Identities=23%  Similarity=0.379  Sum_probs=131.0

Q ss_pred             cCc-EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        149 SDL-RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       149 ~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+| ++...||+|+||.||++.+. .+++.||+|.+.+..                                        
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~----------------------------------------   63 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRK----------------------------------------   63 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             CceEEeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhh----------------------------------------
Confidence            344 67788999999999999865 568899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                       ......+.+.+|+.+|+.++|||||+++++|.+    +..+|+||||++||+|.+++.+.+.+
T Consensus        64 -----------------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l  126 (290)
T 3fpq_A           64 -----------------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM  126 (290)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             -----------------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCC
Confidence                             112234668999999999999999999999865    45699999999999999999988899


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecC-CCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLST-SGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||.|||+++  |+||||||+|||++. +|.+||+|||+|+..
T Consensus       127 ~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          127 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            99999999999999999999999  999999999999974 789999999999754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.7e-34  Score=262.03  Aligned_cols=151  Identities=26%  Similarity=0.470  Sum_probs=125.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++++.||+|+||.||++.+. .+++.||+|.+....                                        
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~----------------------------------------   42 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNK-VDDCNYAIKRIRLPN----------------------------------------   42 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEET-TTCCEEEEEEEEECS----------------------------------------
T ss_pred             chhCEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEeccC----------------------------------------
Confidence            457999999999999999999865 468899999985431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------------eEEEEEeccCCcchHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------------YLYMLMESCLGGELWT  295 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------------~~~lv~e~~~~~~L~~  295 (362)
                                        .....+.+.+|+.+|+.++||||++++++|.+.+            ++|+|||||++|+|.+
T Consensus        43 ------------------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~  104 (299)
T 4g31_A           43 ------------------RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD  104 (299)
T ss_dssp             ------------------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHH
T ss_pred             ------------------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHH
Confidence                              1223456889999999999999999999986543            4799999999999999


Q ss_pred             HHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        296 ILRDKGN---FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       296 ~l~~~~~---l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.....   .+...++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       105 ~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~  169 (299)
T 4g31_A          105 WMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  169 (299)
T ss_dssp             HHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC----
T ss_pred             HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecC
Confidence            9987654   4456788999999999999999999999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.9e-34  Score=260.40  Aligned_cols=157  Identities=22%  Similarity=0.380  Sum_probs=134.6

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHh
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQ  219 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~  219 (362)
                      .+...+++++.+.||+|+||.||++...+    ..++.||||.+...                                 
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~---------------------------------   67 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK---------------------------------   67 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC----------------------------------
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc---------------------------------
Confidence            34567789999999999999999998643    35678999998542                                 


Q ss_pred             hccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        220 LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                               ......+.+.+|+.+|+.++||||+++++++.+++.+|+||||+++|+|.+++..
T Consensus        68 -------------------------~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~  122 (308)
T 4gt4_A           68 -------------------------AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVM  122 (308)
T ss_dssp             -------------------------CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHT
T ss_pred             -------------------------cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHh
Confidence                                     1122345689999999999999999999999999999999999999999999964


Q ss_pred             c----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 K----------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~----------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .                ..+++..+..++.|++.||.|||+++||||||||+|||++.++.+||+|||+|+.+..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~  197 (308)
T 4gt4_A          123 RSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA  197 (308)
T ss_dssp             TCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGG
T ss_pred             hCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccC
Confidence            2                3488999999999999999999999999999999999999999999999999987643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.7e-34  Score=260.12  Aligned_cols=153  Identities=24%  Similarity=0.371  Sum_probs=129.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..+++.+.+.||+|+||.||++.+.+    .+++.||+|.+...                                    
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~------------------------------------   82 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA------------------------------------   82 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC------------------------------------
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC------------------------------------
Confidence            45678999999999999999998643    34678999998542                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                             .....+.+.+|+.+|+.++|||||++++++.+++.+|+||||+++|+|.+++.+.  
T Consensus        83 -----------------------~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~  139 (329)
T 4aoj_A           83 -----------------------SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP  139 (329)
T ss_dssp             -----------------------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSC
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCc
Confidence                                   1223456899999999999999999999999999999999999999999999753  


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 -------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 -------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                   +++++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       140 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~  210 (329)
T 4aoj_A          140 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS  210 (329)
T ss_dssp             C-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccC
Confidence                         3589999999999999999999999999999999999999999999999999987643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.2e-33  Score=276.03  Aligned_cols=161  Identities=29%  Similarity=0.516  Sum_probs=137.9

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.+++.||+|+||.||++++. .+++.||+|++.+......                                 
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~-~tg~~~AiK~i~K~~i~~~---------------------------------  230 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMK---------------------------------  230 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHT---------------------------------
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEeHHHcchh---------------------------------
Confidence            457899999999999999999999955 6789999999977522110                                 


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                          ...........++.+++.++||||++++++|.+++.+|+||||++||+|.+++.+.+.++
T Consensus       231 --------------------~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~  290 (689)
T 3v5w_A          231 --------------------QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS  290 (689)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCC
T ss_pred             --------------------hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCC
Confidence                                001111223344667777899999999999999999999999999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+...
T Consensus       291 E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          291 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999999999999999999999999999999999999999987543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2e-33  Score=254.97  Aligned_cols=150  Identities=26%  Similarity=0.360  Sum_probs=129.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...+++.+.+.||+|+||.||++.+.+    .+|+|+++..+                                      
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~----~vAvK~~~~~~--------------------------------------   70 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG----DVAVKILKVVD--------------------------------------   70 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS----EEEEEECCCSS--------------------------------------
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC----cEEEEEEEecC--------------------------------------
Confidence            456788999999999999999998542    48999875421                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ......+.+.+|+.+|+.++||||+++++++.. +.+||||||+++|+|.+++... .+++
T Consensus        71 -------------------~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~  130 (307)
T 3omv_A           71 -------------------PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQ  130 (307)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCC
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCC
Confidence                               112334678999999999999999999998754 5689999999999999999754 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||+++||||||||+|||++.++.+||+|||+|+...
T Consensus       131 ~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          131 MFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            99999999999999999999999999999999999999999999999998653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5e-33  Score=261.72  Aligned_cols=150  Identities=23%  Similarity=0.432  Sum_probs=132.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.||+|++.+..                                         
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~-~t~~~vAiK~i~~~~-----------------------------------------   91 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAF-----------------------------------------   91 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEETTTT-----------------------------------------
T ss_pred             CCeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEECccc-----------------------------------------
Confidence            57999999999999999999955 568899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHhcCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                      .......++.+|+.+|+.++||||+++++++..      .+.+|+||||+ +|+|.+++.+.++
T Consensus        92 ----------------~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~-~g~L~~~i~~~~~  154 (398)
T 4b99_A           92 ----------------DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP  154 (398)
T ss_dssp             ----------------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECC-SEEHHHHHTSSSC
T ss_pred             ----------------cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCC-CCCHHHHHHhcCC
Confidence                            112234567899999999999999999998653      46799999999 5789999988889


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.
T Consensus       155 l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            9999999999999999999999999999999999999999999999999998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=1.1e-31  Score=249.78  Aligned_cols=147  Identities=23%  Similarity=0.327  Sum_probs=129.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .++|++.+.||+|+||.||++.+..  .+++.||+|.+.+..                                      
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--------------------------------------   61 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--------------------------------------   61 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--------------------------------------
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--------------------------------------
Confidence            4679999999999999999998642  356789999875431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                             ...++.+|+++|+.+ +||||++++++|.+++++|+||||+++++|.++++   .++
T Consensus        62 -----------------------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~---~l~  115 (361)
T 4f9c_A           62 -----------------------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLS  115 (361)
T ss_dssp             -----------------------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT---TCC
T ss_pred             -----------------------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc---CCC
Confidence                                   123467899999988 79999999999999999999999999999999984   599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+|+...+
T Consensus       116 ~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A          116 FQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999999999999999999999999999876 8999999999987643

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=9.8e-32  Score=248.82  Aligned_cols=154  Identities=30%  Similarity=0.412  Sum_probs=130.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++.+.+.    ..+.||+|.+...                                    
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~------------------------------------  105 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG------------------------------------  105 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT------------------------------------
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc------------------------------------
Confidence            457899999999999999999986643    2356888877543                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                            ......+.+.+|+.+|+.++| |||+++++++.. ++.+|+|||||++|+|.+++++.
T Consensus       106 ----------------------~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          106 ----------------------ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             ----------------------cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence                                  112234568999999999965 899999998865 46799999999999999999752


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 ----------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ----------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                      ..+++..+..++.|++.||.|||+++||||||||+|||++.++.+||+|||+|+.+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~  237 (353)
T 4ase_A          164 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  237 (353)
T ss_dssp             GGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTT
T ss_pred             ccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhccc
Confidence                            2378999999999999999999999999999999999999999999999999997744

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2.6e-31  Score=241.87  Aligned_cols=146  Identities=18%  Similarity=0.205  Sum_probs=122.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|.+.+.||+|+||.||++.+.   ++.||||.+...+                                         
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~---g~~VAvK~l~~~~-----------------------------------------   38 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSRE-----------------------------------------   38 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET---TEEEEEEEECGGG-----------------------------------------
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC---CEEEEEEEECccc-----------------------------------------
Confidence            46788899999999999999864   6789999885421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                         ........|+..+..++||||+++++++..++    .+||||||+++|+|.++++. .+++
T Consensus        39 -------------------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~   98 (303)
T 3hmm_A           39 -------------------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVT   98 (303)
T ss_dssp             -------------------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBC
T ss_pred             -------------------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCC
Confidence                               00111234555667789999999999987653    68999999999999999976 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC--------CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSR--------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~--------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +.....++.|++.||.|||++        +|+||||||+|||++.++.+||+|||+|+....
T Consensus        99 ~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  160 (303)
T 3hmm_A           99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence            999999999999999999987        999999999999999999999999999987643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.97  E-value=5.1e-31  Score=259.50  Aligned_cols=153  Identities=27%  Similarity=0.422  Sum_probs=135.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|.+.+.||+|+||.||++.+. .+++.||+|.+.+..                                       
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~-~tg~~~AiK~i~~~~---------------------------------------  194 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPH---------------------------------------  194 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCS---------------------------------------
T ss_pred             CccccEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEeccc---------------------------------------
Confidence            3578999999999999999999955 568899999986531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~  305 (362)
                                          ......+.+|+.+|+.++||||++++++|.+++.+|+||||++||+|.+++.. .+.+++
T Consensus       195 --------------------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e  254 (573)
T 3uto_A          195 --------------------ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE  254 (573)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEH
T ss_pred             --------------------hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCH
Confidence                                11235578999999999999999999999999999999999999999998864 457999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC--CcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS--GYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~--~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.||+.||.|||++||+||||||+|||++.+  +.+||+|||+|+.+...
T Consensus       255 ~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            9999999999999999999999999999999999854  89999999999987543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=9.5e-30  Score=233.40  Aligned_cols=156  Identities=41%  Similarity=0.771  Sum_probs=138.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++... .+++.+|+|++.+...                                     
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-------------------------------------   44 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIV-------------------------------------   44 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh-------------------------------------
Confidence            35789999999999999999999855 5688999999876411                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.+.+.+++
T Consensus        45 -------------------~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  105 (318)
T 1fot_A           45 -------------------VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN  105 (318)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCH
T ss_pred             -------------------hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence                               1112335577899999999999999999999999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus       106 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A          106 PVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            99999999999999999999999999999999999999999999999987643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=9.8e-30  Score=235.11  Aligned_cols=153  Identities=34%  Similarity=0.636  Sum_probs=137.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++... .+++.+|+|++.+...                                      
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~--------------------------------------   43 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVI--------------------------------------   43 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH--------------------------------------
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEeHHHh--------------------------------------
Confidence            5789999999999999999999854 5688999999876421                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ........+.+|+.+++.++||||+++++++.+.+.+|+||||++|++|.+++.+.+.+++.
T Consensus        44 ------------------~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~  105 (337)
T 1o6l_A           44 ------------------IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE  105 (337)
T ss_dssp             ------------------HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHH
T ss_pred             ------------------hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHH
Confidence                              11223456788999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       106 ~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A          106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            99999999999999999999999999999999999999999999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=236.10  Aligned_cols=154  Identities=36%  Similarity=0.656  Sum_probs=135.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AvK~~~~~~~-------------------------------------   61 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKDVI-------------------------------------   61 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEc-CCCCEEEEEEEEHHHh-------------------------------------
Confidence            46789999999999999999999865 5688999999876411                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                         ........+..|..+++.+ +||||+++++++.+.+.+|+||||++|++|.+++.+.+.++
T Consensus        62 -------------------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~  122 (353)
T 3txo_A           62 -------------------LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD  122 (353)
T ss_dssp             -------------------HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC
T ss_pred             -------------------cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence                               1122345578899999987 79999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       123 ~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          123 EARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999999999999999999999999999999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=2.1e-29  Score=232.07  Aligned_cols=154  Identities=33%  Similarity=0.562  Sum_probs=138.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                      
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~--------------------------------------   52 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQ--------------------------------------   52 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGG--------------------------------------
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhc--------------------------------------
Confidence            35789999999999999999999865 458899999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+.+++
T Consensus        53 -------------------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  113 (328)
T 3fe3_A           53 -------------------LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE  113 (328)
T ss_dssp             -------------------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCH
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCH
Confidence                               1122345678999999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       114 ~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A          114 KEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            9999999999999999999999999999999999999999999999997654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=1.9e-29  Score=234.40  Aligned_cols=157  Identities=46%  Similarity=0.820  Sum_probs=140.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++++.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~-------------------------------------   79 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKV-------------------------------------   79 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEEhHHh-------------------------------------
Confidence            46789999999999999999999855 5688999999866421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.+.+.+++
T Consensus        80 -------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  140 (350)
T 1rdq_E           80 -------------------VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE  140 (350)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCH
T ss_pred             -------------------ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence                               1122345678899999999999999999999999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.+...
T Consensus       141 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence            999999999999999999999999999999999999999999999999876543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=2e-29  Score=236.74  Aligned_cols=157  Identities=32%  Similarity=0.624  Sum_probs=140.2

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                    
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~~~~~------------------------------------   53 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKC------------------------------------   53 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEET-TTCCEEEEEEEEHHHH------------------------------------
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehhhc------------------------------------
Confidence            346789999999999999999999855 5688999999866421                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                          ........+.+|+.+++.++||||+++++++.+.+.+|+||||++|++|.+++.....++
T Consensus        54 --------------------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~  113 (384)
T 4fr4_A           54 --------------------VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK  113 (384)
T ss_dssp             --------------------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCC
T ss_pred             --------------------ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCC
Confidence                                112234567899999999999999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       114 ~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A          114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            999999999999999999999999999999999999999999999999987643

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=2.2e-29  Score=237.24  Aligned_cols=155  Identities=34%  Similarity=0.627  Sum_probs=136.5

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|++.+.||+|+||.||++++. .+++.+|+|++.+...                                    
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AvK~~~k~~~------------------------------------   90 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELV------------------------------------   90 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGT------------------------------------
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhc------------------------------------
Confidence            346789999999999999999999865 5688999999876521                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                          ........+..|..++..+ +||||+++++++.+.+.+|+||||+++++|..++.+.+.+
T Consensus        91 --------------------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l  150 (396)
T 4dc2_A           91 --------------------NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL  150 (396)
T ss_dssp             --------------------C----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSC
T ss_pred             --------------------cCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCC
Confidence                                1122334577899999887 8999999999999999999999999999999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       151 ~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          151 PEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            99999999999999999999999999999999999999999999999999863

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=3e-29  Score=232.65  Aligned_cols=154  Identities=33%  Similarity=0.627  Sum_probs=138.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|++.+..                                      
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~--------------------------------------   46 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKEL--------------------------------------   46 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGG--------------------------------------
T ss_pred             CchhheEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEhHH--------------------------------------
Confidence            46789999999999999999999865 568899999987642                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        .........+.+|..++..+ +||||+++++++.+.+.+|+||||+++++|.+++.+.+.++
T Consensus        47 ------------------~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~  108 (345)
T 3a8x_A           47 ------------------VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP  108 (345)
T ss_dssp             ------------------SCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCC
T ss_pred             ------------------hcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence                              11223345678899999887 89999999999999999999999999999999998888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       109 ~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A          109 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999999999999999999999999999999999999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=3.9e-29  Score=236.75  Aligned_cols=155  Identities=37%  Similarity=0.657  Sum_probs=137.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~k~~~-------------------------------------  107 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEM-------------------------------------  107 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEEC-CCCcEEEEEEEehhhh-------------------------------------
Confidence            36789999999999999999999965 5688999999876421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+++.+|+||||++||+|.+++.. ..+++
T Consensus       108 -------------------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e  167 (410)
T 3v8s_A          108 -------------------IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPE  167 (410)
T ss_dssp             -------------------HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCH
T ss_pred             -------------------hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCH
Confidence                               1112234578899999999999999999999999999999999999999999876 56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       168 ~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~  220 (410)
T 3v8s_A          168 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  220 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence            99999999999999999999999999999999999999999999999987654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=3.3e-29  Score=239.03  Aligned_cols=156  Identities=29%  Similarity=0.616  Sum_probs=137.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~~~~~~~-------------------------------------  112 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEM-------------------------------------  112 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHH-------------------------------------
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEc-CCCcEEEEEEEEHHHh-------------------------------------
Confidence            35689999999999999999999965 5578899999876421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                         ........+.+|..++..++||||+++++++.+.+.+|+||||+++|+|.+++.+ .+.++
T Consensus       113 -------------------~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~  173 (437)
T 4aw2_A          113 -------------------LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP  173 (437)
T ss_dssp             -------------------HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCC
T ss_pred             -------------------hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCC
Confidence                               1112234578899999999999999999999999999999999999999999987 46799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       174 e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~  227 (437)
T 4aw2_A          174 EEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  227 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence            999999999999999999999999999999999999999999999999987643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=3.2e-29  Score=232.33  Aligned_cols=154  Identities=34%  Similarity=0.619  Sum_probs=136.0

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~-------------------------------------   55 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVV-------------------------------------   55 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHH-------------------------------------
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhHHh-------------------------------------
Confidence            46789999999999999999999965 5688999999876421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                         ........+..|..++..+ +||||+++++++.+.+.+|+||||++||+|.+++.+.+.++
T Consensus        56 -------------------~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~  116 (345)
T 1xjd_A           56 -------------------LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD  116 (345)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC
T ss_pred             -------------------hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence                               1112334567889999876 99999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       117 ~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A          117 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            9999999999999999999999999999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=4.1e-29  Score=236.78  Aligned_cols=156  Identities=31%  Similarity=0.602  Sum_probs=138.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++... .+++.+|+|++.+...                                     
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~-~~~~~vAiK~l~k~~~-------------------------------------   99 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDM-------------------------------------   99 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHh-------------------------------------
Confidence            35689999999999999999999865 5688999999876421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                         ........+.+|..++..++||||+++++++.+.+.+|+||||++|++|.+++.+.+ .++
T Consensus       100 -------------------~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~  160 (412)
T 2vd5_A          100 -------------------LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP  160 (412)
T ss_dssp             -------------------HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCC
T ss_pred             -------------------hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCC
Confidence                               112233557889999999999999999999999999999999999999999998754 799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       161 ~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence            999999999999999999999999999999999999999999999999987643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=7.1e-29  Score=225.09  Aligned_cols=154  Identities=22%  Similarity=0.326  Sum_probs=137.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. ..++.+|+|.+...                                        
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~----------------------------------------   47 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDT-ILNIKVAIKAIFIP----------------------------------------   47 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEET-TTCSEEEEEEEECC----------------------------------------
T ss_pred             hhccEEEEEEEccCCCEEEEEEEEC-CCCCeEEEEEeccC----------------------------------------
Confidence            3468999999999999999999855 45788999988543                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                      ..........+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+++++.
T Consensus        48 ----------------~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~  111 (294)
T 4eqm_A           48 ----------------PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD  111 (294)
T ss_dssp             ----------------SSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHH
T ss_pred             ----------------ccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHH
Confidence                            1112234466889999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       112 ~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A          112 TAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999999999999999999999999999999999999999997653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=5e-29  Score=231.72  Aligned_cols=155  Identities=32%  Similarity=0.590  Sum_probs=136.4

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.+.+.||+|+||.||++.+. .+++.+|+|++.+...                                    
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~------------------------------------   58 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV------------------------------------   58 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEET-TEEEEEEEEEEEHHHH------------------------------------
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHh------------------------------------
Confidence            356899999999999999999999865 4578899999876421                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                          ........+..|..++..+ +||||+++++++.+.+.+|+||||++|++|.+++...+.+
T Consensus        59 --------------------~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~  118 (353)
T 2i0e_A           59 --------------------IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF  118 (353)
T ss_dssp             --------------------HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             --------------------hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCC
Confidence                                1122345578899999887 8999999999999999999999999999999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       119 ~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A          119 KEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            99999999999999999999999999999999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=7.4e-29  Score=232.23  Aligned_cols=154  Identities=36%  Similarity=0.664  Sum_probs=129.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++++.||+|+||.||++++. .+++.+|+|++.+....                                    
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~------------------------------------   77 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAIL------------------------------------   77 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEET-TTCCEEEEEEEEGGGBC------------------------------------
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHhh------------------------------------
Confidence            46789999999999999999999965 56889999999765321                                    


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHH-HhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI-MGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                          .......+..|..+ ++.++||||+++++++.+.+.+|+||||++|++|.+++.+.+.++
T Consensus        78 --------------------~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~  137 (373)
T 2r5t_A           78 --------------------KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL  137 (373)
T ss_dssp             ---------------------------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC
T ss_pred             --------------------hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC
Confidence                                11223345666666 567899999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       138 ~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          138 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            9999999999999999999999999999999999999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.3e-28  Score=227.33  Aligned_cols=155  Identities=28%  Similarity=0.470  Sum_probs=137.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                      
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~--------------------------------------   46 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHY-KTQQKVALKFISRQL--------------------------------------   46 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHH--------------------------------------
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHH--------------------------------------
Confidence            35789999999999999999999965 458899999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .........+.+|+.+++.++||||+++++++..++.+|+||||+ +|+|.+++...+.+++
T Consensus        47 ------------------~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~  107 (336)
T 3h4j_B           47 ------------------LKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE  107 (336)
T ss_dssp             ------------------HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCH
T ss_pred             ------------------ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCH
Confidence                              111123356889999999999999999999999999999999999 8899999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       108 ~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B          108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            99999999999999999999999999999999999999999999999986543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.96  E-value=3.3e-28  Score=226.92  Aligned_cols=157  Identities=25%  Similarity=0.406  Sum_probs=137.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+.....                                     
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~-~~~~~~avK~i~~~~~~~-------------------------------------   52 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRA-------------------------------------   52 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEBCSSTT-------------------------------------
T ss_pred             hhceEEeeEEeeCcCEEEEEEEEC-CCCCEEEEEEEEcccccc-------------------------------------
Confidence            456999999999999999999855 568899999987642110                                     


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                      .........+.+|+.+++.++||||+++++++.+.+.+|+||||++|++|.+++...+.+++..
T Consensus        53 ----------------~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~  116 (361)
T 2yab_A           53 ----------------SRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE  116 (361)
T ss_dssp             ----------------CSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHH
T ss_pred             ----------------ccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHH
Confidence                            0011134568899999999999999999999999999999999999999999998878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+|||++.++    .+||+|||+++.+..
T Consensus       117 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~  171 (361)
T 2yab_A          117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence            999999999999999999999999999999998776    799999999987654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=2.3e-28  Score=225.08  Aligned_cols=157  Identities=37%  Similarity=0.646  Sum_probs=130.9

Q ss_pred             hccccCcEEEEEecccceecEEEEEec--CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIA--GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ....++|++.+.||+|+||.||++...  ..+++.+|+|++.+....                                 
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~---------------------------------   59 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV---------------------------------   59 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------------------------
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh---------------------------------
Confidence            345789999999999999999999864  246789999998764211                                 


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                            ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++...+.
T Consensus        60 ----------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  117 (327)
T 3a62_A           60 ----------------------RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI  117 (327)
T ss_dssp             ---------------------------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSS
T ss_pred             ----------------------hhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC
Confidence                                  0112234567899999999999999999999999999999999999999999988888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A          118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            999999999999999999999999999999999999999999999999999754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.96  E-value=4.5e-28  Score=219.38  Aligned_cols=151  Identities=25%  Similarity=0.435  Sum_probs=131.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   39 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDD----------------------------------------   39 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSC----------------------------------------
T ss_pred             CCCceeeeEecCCCCeEEEEEEEC-CCCceEEEEeeeccC----------------------------------------
Confidence            468999999999999999999865 458899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHH-hcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~  306 (362)
                                       ........+.+|+.+++.++||||+++++++.+++.+|+||||+++ ++.+.+. ..+.+++.
T Consensus        40 -----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~  101 (292)
T 3o0g_A           40 -----------------DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPE  101 (292)
T ss_dssp             -----------------SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHH
T ss_pred             -----------------CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHH
Confidence                             1122345678899999999999999999999999999999999965 5555554 45679999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       102 ~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A          102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            999999999999999999999999999999999999999999999998764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=8e-28  Score=219.60  Aligned_cols=151  Identities=26%  Similarity=0.397  Sum_probs=135.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+.                                        
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~va~K~~~~~----------------------------------------   46 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRF----------------------------------------   46 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEESCC----------------------------------------
T ss_pred             ChhHeeccceecCCCCEEEEEEEEC-CCCcEEEEEEeccC----------------------------------------
Confidence            4678999999999999999999865 45788999987432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~  305 (362)
                                         .......+.+|+.+++.++||||+++++++.+++..++||||+++++|.+++.. ...+++
T Consensus        47 -------------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  107 (310)
T 3s95_A           47 -------------------DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPW  107 (310)
T ss_dssp             -------------------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCH
T ss_pred             -------------------CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCH
Confidence                               123346688999999999999999999999999999999999999999999987 456999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       108 ~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A          108 SQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV  159 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence            9999999999999999999999999999999999999999999999998763

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=2.9e-28  Score=234.87  Aligned_cols=157  Identities=27%  Similarity=0.459  Sum_probs=139.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.+.+.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~-~~g~~vAvK~i~~~~~-------------------------------------   54 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHE-LTGHKVAVKILNRQKI-------------------------------------   54 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhc-------------------------------------
Confidence            46789999999999999999999865 4688999999865411                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++.+.+.+++
T Consensus        55 -------------------~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~  115 (476)
T 2y94_A           55 -------------------RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE  115 (476)
T ss_dssp             -------------------HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCH
T ss_pred             -------------------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence                               1112345688999999999999999999999999999999999999999999988788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....+
T Consensus       116 ~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A          116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            999999999999999999999999999999999999999999999999876543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.95  E-value=5.4e-28  Score=219.61  Aligned_cols=151  Identities=26%  Similarity=0.425  Sum_probs=134.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   57 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQ---------------------------------------   57 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBT-TTCCEEEEEEEEGGG---------------------------------------
T ss_pred             hhhceeeeeeeccCCCeEEEEEEEC-CCCcEEEEEEeeccc---------------------------------------
Confidence            3568999999999999999999854 568899999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                          ......+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++.. ..+++.
T Consensus        58 --------------------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~  116 (297)
T 3fxz_A           58 --------------------QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEG  116 (297)
T ss_dssp             --------------------CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHH
T ss_pred             --------------------ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh-cCCCHH
Confidence                                11234578899999999999999999999999999999999999999999976 469999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       117 ~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (297)
T 3fxz_A          117 QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            9999999999999999999999999999999999999999999999987653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=2.9e-28  Score=224.10  Aligned_cols=151  Identities=28%  Similarity=0.458  Sum_probs=133.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.+|+|++.....                                      
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--------------------------------------   45 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRA--------------------------------------   45 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC----------------------------------------
T ss_pred             HhhhceeeeEEecCCCEEEEEEEEC-CCCcEEEEEEEEcccc--------------------------------------
Confidence            3689999999999999999999865 4588999999854310                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                          ......+.+|+.+++.++||||+++++++.+++..|+||||+++++|.+++.....+++.
T Consensus        46 --------------------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  105 (323)
T 3tki_A           46 --------------------VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP  105 (323)
T ss_dssp             -------------------------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHH
T ss_pred             --------------------cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHH
Confidence                                112245788999999999999999999999999999999999999999999877789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus       106 ~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A          106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence            99999999999999999999999999999999999999999999999765

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.95  E-value=6e-28  Score=231.02  Aligned_cols=153  Identities=25%  Similarity=0.416  Sum_probs=134.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~-~~~~~~a~K~i~~~~----------------------------------------   48 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKV-LAGQEYAAMIINTKK----------------------------------------   48 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEET-TTTEEEEEEEEESCS----------------------------------------
T ss_pred             cCCeEEEEEeccCCCeEEEEEEEC-CCCcEEEEEEEEccc----------------------------------------
Confidence            467999999999999999999855 458899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++.+++..|+||||++|++|.+.+...+.+++..
T Consensus        49 -----------------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~  111 (444)
T 3soa_A           49 -----------------LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD  111 (444)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHH
T ss_pred             -----------------CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHH
Confidence                             112234568899999999999999999999999999999999999999999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec---CCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~---~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+|||++   .++.+||+|||+|+.+.+
T Consensus       112 ~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A          112 ASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            999999999999999999999999999999998   457899999999987654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=6e-28  Score=236.35  Aligned_cols=156  Identities=30%  Similarity=0.557  Sum_probs=137.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAvK~l~k~~~-------------------------------------  222 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRI-------------------------------------  222 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhHhh-------------------------------------
Confidence            45688999999999999999999855 5688999999866421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l  303 (362)
                                         ........+.+|+.+|+.++||||+++++++.+.+.+|+||||++||+|.+++...+  .+
T Consensus       223 -------------------~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l  283 (576)
T 2acx_A          223 -------------------KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF  283 (576)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCC
T ss_pred             -------------------hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCC
Confidence                               112233557889999999999999999999999999999999999999999987654  39


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       284 ~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          284 PEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            9999999999999999999999999999999999999999999999999987654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-27  Score=219.93  Aligned_cols=150  Identities=26%  Similarity=0.405  Sum_probs=133.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+...                                         
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~-----------------------------------------   41 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVK-----------------------------------------   41 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCC-----------------------------------------
T ss_pred             hhceEeeeEEecCCCeEEEEEEEC-CCCcEEEEEEEecC-----------------------------------------
Confidence            578999999999999999999855 55788999987532                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~  306 (362)
                                         ......+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.... .+++.
T Consensus        42 -------------------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~  102 (321)
T 1tki_A           42 -------------------GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNER  102 (321)
T ss_dssp             -------------------THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHH
T ss_pred             -------------------cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHH
Confidence                               1123457889999999999999999999999999999999999999999997653 69999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.  ++.+||+|||+++.+..
T Consensus       103 ~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A          103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            99999999999999999999999999999999987  78999999999987643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=8.1e-28  Score=224.54  Aligned_cols=153  Identities=28%  Similarity=0.463  Sum_probs=134.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~----------------------------------------   66 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKK----------------------------------------   66 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTT----------------------------------------
T ss_pred             ccCeEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEEccc----------------------------------------
Confidence            357999999999999999999854 568899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+.+...+.+++..
T Consensus        67 -----------------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  129 (362)
T 2bdw_A           67 -----------------LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD  129 (362)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHH
T ss_pred             -----------------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHH
Confidence                             112234568899999999999999999999999999999999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC---CcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~---~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+|||++.+   +.+||+|||+++.+..
T Consensus       130 ~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            99999999999999999999999999999999864   4599999999987653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=9.4e-28  Score=224.76  Aligned_cols=154  Identities=25%  Similarity=0.402  Sum_probs=134.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecC------CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG------DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      ..++|.+.+.||+|+||.||++.+.+      ..+..+|+|.+...                                  
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------------------------------  124 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----------------------------------  124 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT----------------------------------
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC----------------------------------
Confidence            45789999999999999999998643      23456899987543                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              ........+.+|+.+++.+ +||||+++++++...+.+|+||||+++++|.+++..
T Consensus       125 ------------------------~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  180 (370)
T 2psq_A          125 ------------------------ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA  180 (370)
T ss_dssp             ------------------------CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             ------------------------cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHh
Confidence                                    1122345688999999999 899999999999999999999999999999999986


Q ss_pred             cC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 KG----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..                .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  255 (370)
T 2psq_A          181 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN  255 (370)
T ss_dssp             TCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTC
T ss_pred             hCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCc
Confidence            43                378899999999999999999999999999999999999999999999999987654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=219.80  Aligned_cols=155  Identities=26%  Similarity=0.410  Sum_probs=135.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+....                                       
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~---------------------------------------   50 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTK---------------------------------------   50 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEBCCST---------------------------------------
T ss_pred             cceEeceEEeeCCCeEEEEEEEC-CCCcEEEEEEEEccccc---------------------------------------
Confidence            56999999999999999999855 56889999998764211                                       


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                    ..........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++...+.+++..+
T Consensus        51 --------------~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  116 (326)
T 2y0a_A           51 --------------SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA  116 (326)
T ss_dssp             --------------TCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHH
T ss_pred             --------------cccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHH
Confidence                          000112345688999999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||++||+||||||+||+++.++    .+||+|||+++.+.
T Consensus       117 ~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A          117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            99999999999999999999999999999998877    79999999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=3.2e-28  Score=233.59  Aligned_cols=154  Identities=36%  Similarity=0.648  Sum_probs=129.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+. .+++.||+|++.+...                                     
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~-------------------------------------  186 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEK-ATGRYYAMKILKKEVI-------------------------------------  186 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEc-CCCCEEEEEEEEhhhh-------------------------------------
Confidence            35688999999999999999999855 5688999999865411                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++...+.+++
T Consensus       187 -------------------~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  247 (446)
T 4ejn_A          187 -------------------VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE  247 (446)
T ss_dssp             -------------------C-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCH
T ss_pred             -------------------hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCH
Confidence                               1122334567899999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..++.++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+|+..
T Consensus       248 ~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          248 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            9999999999999999998 99999999999999999999999999999764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=3e-28  Score=222.69  Aligned_cols=154  Identities=25%  Similarity=0.364  Sum_probs=132.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   49 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDL-RDHRDVAVKVLRADL---------------------------------------   49 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECTTT---------------------------------------
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEEC-CCCceEEEEEeCccc---------------------------------------
Confidence            3578999999999999999999965 457899999986531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                       .........+.+|+.+++.++||||+++++++....    ..|+||||+++++|.+++...+.
T Consensus        50 -----------------~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~  112 (311)
T 3ork_A           50 -----------------ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP  112 (311)
T ss_dssp             -----------------TTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCS
T ss_pred             -----------------cCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCC
Confidence                             112233456889999999999999999999987553    45999999999999999998888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A          113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence            9999999999999999999999999999999999999999999999999997653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=1.3e-27  Score=223.18  Aligned_cols=149  Identities=26%  Similarity=0.406  Sum_probs=131.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   57 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDK-LTKELVAVKYIERGA---------------------------------------   57 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEET-TTCCEEEEEEEESST---------------------------------------
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEecCc---------------------------------------
Confidence            4578999999999999999999965 468899999986431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                           .....+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+.+++.
T Consensus        58 ---------------------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  116 (361)
T 3uc3_A           58 ---------------------AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED  116 (361)
T ss_dssp             ---------------------TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             ---------------------cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHH
Confidence                                 11244778999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc--EEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY--VKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~--~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.  +||+|||+|+..
T Consensus       117 ~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A          117 EARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS  168 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence            99999999999999999999999999999999987665  999999998743

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=1.3e-27  Score=233.21  Aligned_cols=156  Identities=35%  Similarity=0.561  Sum_probs=137.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||++.+. .+++.+|+|++.+...                                     
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~l~k~~~-------------------------------------  223 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMK-ATGKLYACKKLNKKRL-------------------------------------  223 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEEhHHh-------------------------------------
Confidence            46789999999999999999999854 5688999999866421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----C
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----G  301 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~  301 (362)
                                         ........+.+|+.+++.++||||+++++++.+.+.+|+||||++|++|.+++...    .
T Consensus       224 -------------------~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~  284 (543)
T 3c4z_A          224 -------------------KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP  284 (543)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSC
T ss_pred             -------------------hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccc
Confidence                               11123456788999999999999999999999999999999999999999998763    3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++.+..
T Consensus       285 ~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            599999999999999999999999999999999999999999999999999987643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.95  E-value=1.3e-27  Score=214.84  Aligned_cols=155  Identities=32%  Similarity=0.519  Sum_probs=136.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                      
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--------------------------------------   46 (279)
T 3fdn_A            6 WALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQ--------------------------------------   46 (279)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHH--------------------------------------
T ss_pred             eecccEEEeeEEecCCCeEEEEEEEc-cCCcEEEEEEEeccc--------------------------------------
Confidence            36789999999999999999999865 457789999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++.....+++
T Consensus        47 ------------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~  108 (279)
T 3fdn_A           47 ------------------LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE  108 (279)
T ss_dssp             ------------------HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             ------------------cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence                              11122345678999999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus       109 ~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A          109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            9999999999999999999999999999999999999999999999986543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.95  E-value=1.5e-27  Score=219.26  Aligned_cols=153  Identities=24%  Similarity=0.449  Sum_probs=130.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~----------------------------------------   43 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPN----------------------------------------   43 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEET-TTCCEEEEEEEECCS----------------------------------------
T ss_pred             hhcCceeeEecCCCCeEEEEEEEc-CCCcEEEEEEeecCC----------------------------------------
Confidence            567999999999999999999965 457899999986431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----------------------------
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----------------------------  279 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----------------------------  279 (362)
                                        .....+.+.+|+.+++.++||||+++++++.+..                            
T Consensus        44 ------------------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (332)
T 3qd2_B           44 ------------------RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPM  105 (332)
T ss_dssp             ------------------TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------
T ss_pred             ------------------chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcc
Confidence                              1223456889999999999999999999875432                            


Q ss_pred             -----------------------------eEEEEEeccCCcchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCc
Q psy14740        280 -----------------------------YLYMLMESCLGGELWTILRDKGN---FDDATTRFYTACVVEAFDYLHSRNI  327 (362)
Q Consensus       280 -----------------------------~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~ql~~al~~lH~~~i  327 (362)
                                                   ++|+||||+++++|.+++.....   .++..++.++.|++.||.|||++||
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  185 (332)
T 3qd2_B          106 DAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL  185 (332)
T ss_dssp             --------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCe
Confidence                                         48999999999999999987543   4566789999999999999999999


Q ss_pred             EeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       328 iHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +||||||+||+++.++.+||+|||+++.+...
T Consensus       186 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred             eecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence            99999999999999999999999999877543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.95  E-value=1.3e-27  Score=222.24  Aligned_cols=156  Identities=26%  Similarity=0.381  Sum_probs=132.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.+|+|++.......                                      
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~--------------------------------------   64 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFTS--------------------------------------   64 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHT--------------------------------------
T ss_pred             cceEEeeEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhhccc--------------------------------------
Confidence            57999999999999999999855 568899999986532100                                      


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----CCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----GNFD  304 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~  304 (362)
                                      ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+.+...    ..++
T Consensus        65 ----------------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  128 (351)
T 3c0i_A           65 ----------------SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS  128 (351)
T ss_dssp             ----------------SSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCC
T ss_pred             ----------------cccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCC
Confidence                            01112356889999999999999999999999999999999999999998877543    2489


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc---EEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~---~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.   +||+|||+++.+...
T Consensus       129 ~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          129 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES  186 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCC
Confidence            9999999999999999999999999999999999986554   999999999877543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.95  E-value=6.8e-28  Score=232.04  Aligned_cols=151  Identities=23%  Similarity=0.365  Sum_probs=124.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.||+|.+.+.                                         
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~-----------------------------------------   89 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDK-LEKRVVAIKKILRV-----------------------------------------   89 (458)
T ss_dssp             CTTEEECCC-------CEEEEEEC-C--CEEEEEEECST-----------------------------------------
T ss_pred             CCCeEEeeEeeecCCeEEEEEEEC-CCCcEEEEEEechh-----------------------------------------
Confidence            478999999999999999999855 45889999988542                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                      ........++.+|+.+|+.++||||+++++++.     ....+|+|||++ +++|.+++.....
T Consensus        90 ----------------~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~  152 (458)
T 3rp9_A           90 ----------------FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVY  152 (458)
T ss_dssp             ----------------TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCC
T ss_pred             ----------------hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCC
Confidence                            112233466889999999999999999999984     335799999998 7899999988778


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            9999999999999999999999999999999999999999999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=219.02  Aligned_cols=155  Identities=25%  Similarity=0.338  Sum_probs=135.0

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ...++|++.+.||+|+||.||++.+...  .+..+|+|.+...                                     
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-------------------------------------   88 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-------------------------------------   88 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-------------------------------------
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-------------------------------------
Confidence            3567899999999999999999986532  2345999988543                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                           ........+.+|+.+++.++||||+++++++.+++..|+||||+++++|.+++... ..
T Consensus        89 ---------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  147 (325)
T 3kul_A           89 ---------------------YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ  147 (325)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTC
T ss_pred             ---------------------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccC
Confidence                                 11223456889999999999999999999999999999999999999999999754 57


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       148 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            99999999999999999999999999999999999999999999999999987643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=1.6e-27  Score=239.28  Aligned_cols=155  Identities=32%  Similarity=0.590  Sum_probs=136.7

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|.+++.||+|+||.||++.+. .+++.||+|++.+...                                    
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~l~~~~~------------------------------------  379 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVV------------------------------------  379 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEES-SSCCEEEEEEEEHHHH------------------------------------
T ss_pred             cccccceEEEEEEccCCCEEEEEEEEC-CCCcEEEEEEEecccc------------------------------------
Confidence            346789999999999999999999965 4688899999876411                                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                          ........+..|..++..+ +||+|+++++++.+.+.+|+||||+++++|.+++...+.+
T Consensus       380 --------------------~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~  439 (674)
T 3pfq_A          380 --------------------IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF  439 (674)
T ss_dssp             --------------------HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             --------------------ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCC
Confidence                                1122345678899999887 7999999999999999999999999999999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       440 ~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          440 KEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            99999999999999999999999999999999999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=2.2e-27  Score=223.74  Aligned_cols=152  Identities=16%  Similarity=0.248  Sum_probs=136.1

Q ss_pred             cccCcEEEEEeccc--ceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVG--GFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G--~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|++.+.||+|  +||.||++.+. .+++.+|+|.+....                                     
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~-~~~~~vavK~~~~~~-------------------------------------   64 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEA-------------------------------------   64 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEET-TTCCEEEEEEEEGGG-------------------------------------
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEc-CCCCEEEEEEecccc-------------------------------------
Confidence            57889999999999  99999999965 468899999986531                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GN  302 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~  302 (362)
                                          ........+.+|+.+++.++||||+++++++.+++.+|+||||+++++|.+++...  ..
T Consensus        65 --------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  124 (389)
T 3gni_B           65 --------------------CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG  124 (389)
T ss_dssp             --------------------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTC
T ss_pred             --------------------cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccC
Confidence                                11234456788999999999999999999999999999999999999999999875  56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||.+..+
T Consensus       125 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            999999999999999999999999999999999999999999999999988654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.95  E-value=2e-27  Score=217.24  Aligned_cols=153  Identities=24%  Similarity=0.393  Sum_probs=131.9

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      +...++|++.+.||+|+||.||++.+.  .++.+|+|.+....                                     
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~-------------------------------------   57 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDA-------------------------------------   57 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC----------------------------------------
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEeccc-------------------------------------
Confidence            345789999999999999999999864  37889999885431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                          ........+.+|+.+++.++||||+++++++.+++.+|+||||++ ++|.+++... ..+
T Consensus        58 --------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~  116 (311)
T 3niz_A           58 --------------------EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL  116 (311)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTTCC
T ss_pred             --------------------ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccCCC
Confidence                                112234567899999999999999999999999999999999995 5888877654 459


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       117 ~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          117 QDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            999999999999999999999999999999999999999999999999998764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.95  E-value=2.8e-27  Score=215.94  Aligned_cols=152  Identities=26%  Similarity=0.415  Sum_probs=135.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   40 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESE----------------------------------------   40 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCCC----------------------------------------
T ss_pred             cccceEeeEEeecCCeEEEEEEeC-CCCcEEEEEEeeccc----------------------------------------
Confidence            578999999999999999999865 458899999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++...+..++||||+++++|.+++...+.+++..
T Consensus        41 -----------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~  103 (311)
T 4agu_A           41 -----------------DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL  103 (311)
T ss_dssp             -----------------C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHH
T ss_pred             -----------------cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHH
Confidence                             112234567889999999999999999999999999999999999999999988777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A          104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            99999999999999999999999999999999999999999999998765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.95  E-value=2.2e-27  Score=226.74  Aligned_cols=152  Identities=23%  Similarity=0.418  Sum_probs=133.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.||+|.+.+.                                         
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~-----------------------------------------   62 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRM-----------------------------------------   62 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECST-----------------------------------------
T ss_pred             cCCEEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeCch-----------------------------------------
Confidence            578999999999999999999865 56888999998642                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                      ........++.+|+.+|+.++||||+++++++...     ..+|+||||+ +++|.+++.....
T Consensus        63 ----------------~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~  125 (432)
T 3n9x_A           63 ----------------FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIF  125 (432)
T ss_dssp             ----------------TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECC-SEEHHHHHHSSCC
T ss_pred             ----------------hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecC-CcCHHHHHhccCC
Confidence                            11223346688999999999999999999998766     5799999998 5799999988778


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       126 l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999987643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.95  E-value=1.9e-27  Score=214.82  Aligned_cols=150  Identities=28%  Similarity=0.474  Sum_probs=131.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+  ..++.+|+|.+....                                        
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~aiK~~~~~~----------------------------------------   38 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEK----------------------------------------   38 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSS----------------------------------------
T ss_pred             CccchhhhhcccCCCEEEEEEEc--CCCCEEEEEEEeccc----------------------------------------
Confidence            46899999999999999999986  357889999885431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                       ........+.+|+.+++.++||||+++++++..++.+|+||||++ ++|.+++... +.+++.
T Consensus        39 -----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~  100 (288)
T 1ob3_A           39 -----------------EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESV  100 (288)
T ss_dssp             -----------------GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHTSTTCCCHH
T ss_pred             -----------------cccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCHHHHHHhcccCCCHH
Confidence                             111223557889999999999999999999999999999999995 5999988764 569999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       101 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A          101 TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence            999999999999999999999999999999999999999999999997653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-27  Score=222.26  Aligned_cols=156  Identities=31%  Similarity=0.615  Sum_probs=136.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ..+++|++.+.||+|+||.||++....  .+++.+|+|++.+....                                  
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----------------------------------   96 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV----------------------------------   96 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE----------------------------------
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh----------------------------------
Confidence            356899999999999999999998643  46789999998764211                                  


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                           ........+.+|+.+++.+ +||||+++++++...+.+|+||||+++++|.+++.....
T Consensus        97 ---------------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  155 (355)
T 1vzo_A           97 ---------------------QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER  155 (355)
T ss_dssp             ---------------------EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC
T ss_pred             ---------------------hhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCC
Confidence                                 1112234466799999999 699999999999999999999999999999999988888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus       156 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            999999999999999999999999999999999999999999999999999865

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.95  E-value=1.5e-27  Score=223.93  Aligned_cols=153  Identities=25%  Similarity=0.400  Sum_probs=135.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|.+...                                        
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------------------  150 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRET----------------------------------------  150 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEECCTT----------------------------------------
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEe-cCCeEEEEEEcccc----------------------------------------
Confidence            4578999999999999999999965 45788999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                        ........+.+|+.+|+.++||||+++++++...+.+|+||||+++++|.+++...+ .+++
T Consensus       151 ------------------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~  212 (377)
T 3cbl_A          151 ------------------LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV  212 (377)
T ss_dssp             ------------------SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCH
T ss_pred             ------------------CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCH
Confidence                              112233567899999999999999999999999999999999999999999998654 5999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       213 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            99999999999999999999999999999999999999999999999987543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=3.9e-27  Score=211.51  Aligned_cols=154  Identities=29%  Similarity=0.528  Sum_probs=136.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.+|+|.+.+...                                      
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--------------------------------------   49 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAM--------------------------------------   49 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH--------------------------------------
T ss_pred             ccccceeeeeecCCCceEEEEEEEc-cCCceEEEEEeehhhh--------------------------------------
Confidence            6788999999999999999999854 4578899999865311                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                        ........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++... ..+++
T Consensus        50 ------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  111 (278)
T 3cok_A           50 ------------------YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE  111 (278)
T ss_dssp             ------------------HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCH
T ss_pred             ------------------hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCH
Confidence                              11123456889999999999999999999999999999999999999999999865 56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       112 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A          112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            9999999999999999999999999999999999999999999999998764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=5.3e-27  Score=216.68  Aligned_cols=154  Identities=27%  Similarity=0.420  Sum_probs=137.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~---------------------------------------   78 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSL---------------------------------------   78 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGG---------------------------------------
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEechhh---------------------------------------
Confidence            4578999999999999999999855 567889999986541                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       .........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++...+.+++.
T Consensus        79 -----------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~  141 (335)
T 2owb_A           79 -----------------LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP  141 (335)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHH
T ss_pred             -----------------hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHH
Confidence                             112234456888999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       142 ~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          142 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            999999999999999999999999999999999999999999999998764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.95  E-value=6.4e-27  Score=211.90  Aligned_cols=154  Identities=27%  Similarity=0.420  Sum_probs=137.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~---------------------------------------   52 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSL---------------------------------------   52 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGG---------------------------------------
T ss_pred             cccceEEEEEEeecCCEEEEEEEEC-CCCceEEEEEechhh---------------------------------------
Confidence            4578999999999999999999855 557889999886541                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       .........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...+.+++.
T Consensus        53 -----------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  115 (294)
T 2rku_A           53 -----------------LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP  115 (294)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHH
T ss_pred             -----------------ccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHH
Confidence                             112233456888999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       116 ~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A          116 EARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            999999999999999999999999999999999999999999999998764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=4.7e-27  Score=209.88  Aligned_cols=152  Identities=26%  Similarity=0.412  Sum_probs=134.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +..++|++.+.||+|+||.||++.+..  +..+|+|.+....                                      
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--------------------------------------   44 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKG--QYDVAVKMIKEGS--------------------------------------   44 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECBTT--------------------------------------
T ss_pred             echhheeeeeeeccCCCceEEEEEecC--ceeEEEEEeccCC--------------------------------------
Confidence            356889999999999999999997553  5679999886431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                            .....+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++...+ .++
T Consensus        45 ----------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  102 (268)
T 3sxs_A           45 ----------------------MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE  102 (268)
T ss_dssp             ----------------------BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCC
T ss_pred             ----------------------CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCC
Confidence                                  112457889999999999999999999999999999999999999999998754 599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++....+
T Consensus       103 ~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A          103 PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            9999999999999999999999999999999999999999999999999876543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=4.1e-27  Score=212.12  Aligned_cols=155  Identities=32%  Similarity=0.554  Sum_probs=137.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+...                                     
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~-------------------------------------   52 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQL-------------------------------------   52 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHH-------------------------------------
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEc-CCCcEEEEEEEccccc-------------------------------------
Confidence            35789999999999999999999865 4577899998865311                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...+.+++
T Consensus        53 -------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  113 (284)
T 2vgo_A           53 -------------------EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE  113 (284)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             -------------------chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCH
Confidence                               1112235678999999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus       114 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A          114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            9999999999999999999999999999999999999999999999987654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=2.8e-27  Score=218.62  Aligned_cols=160  Identities=24%  Similarity=0.407  Sum_probs=137.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+.+......                                    
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~------------------------------------   65 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDK-EKNKEVVVKFIKKEKVLED------------------------------------   65 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEET-TTTEEEEEEEEESTTSCTT------------------------------------
T ss_pred             ccceEEEeEEEecCCEEEEEEEEC-CCCcEEEEEEEehhhcccc------------------------------------
Confidence            468999999999999999999855 4588999999876532110                                    


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCc-chHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGG-ELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~l~~~  306 (362)
                                     ..........+.+|+.+++.++||||+++++++.+.+.+++|||++.++ +|.+++.....+++.
T Consensus        66 ---------------~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~  130 (335)
T 3dls_A           66 ---------------CWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP  130 (335)
T ss_dssp             ---------------SEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHH
T ss_pred             ---------------cccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHH
Confidence                           0011223455778999999999999999999999999999999998766 999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..+
T Consensus       131 ~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          131 LASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence            99999999999999999999999999999999999999999999999876543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.95  E-value=1.9e-27  Score=215.88  Aligned_cols=177  Identities=24%  Similarity=0.456  Sum_probs=131.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccc-cceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRT-ANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~-a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|++.+........... .......+                    
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~--------------------   68 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP--------------------   68 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEET-TTTEEEEEEEEECC---------------------------------------
T ss_pred             eeecceEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEeehhhhhhhcccccccccccccc--------------------
Confidence            45789999999999999999999855 457899999987653221110000 00000000                    


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                    ..............+.+|+.+++.++||||+++++++.+  .+.+|+||||+++++|.+++. .++
T Consensus        69 --------------~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~  133 (298)
T 2zv2_A           69 --------------APGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKP  133 (298)
T ss_dssp             --------------------------CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSC
T ss_pred             --------------cccccccccchHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCC
Confidence                          000011112234668899999999999999999999876  578999999999999988654 357


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       134 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  189 (298)
T 2zv2_A          134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG  189 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999987654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=4.6e-27  Score=215.46  Aligned_cols=152  Identities=25%  Similarity=0.333  Sum_probs=131.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+.+.||+|+||.||++.+. .+++.+|+|++.....                                       
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~---------------------------------------   47 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISF---------------------------------------   47 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGG---------------------------------------
T ss_pred             CCCEEEEEEecCCCCeEEEEEEEC-CCCcEEEEEEeccccc---------------------------------------
Confidence            467999999999999999999865 4578999999864311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--eEEEEEeccCCcchHHHHHhcC---C
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKG---N  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~---~  302 (362)
                                         ......+.+|+.+++.++||||+++++++....  ..|+||||+++++|.+++....   .
T Consensus        48 -------------------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  108 (319)
T 4euu_A           48 -------------------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG  108 (319)
T ss_dssp             -------------------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTC
T ss_pred             -------------------cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccC
Confidence                               112345678999999999999999999987654  7899999999999999998643   3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe----cCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~----~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.+..
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~  168 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence            9999999999999999999999999999999999999    7778899999999987654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=2.2e-27  Score=215.12  Aligned_cols=153  Identities=27%  Similarity=0.422  Sum_probs=131.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEe---cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQI---AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ...++|++.+.||+|+||.||++..   ...+++.+|+|.+...                                    
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~------------------------------------   50 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------------------------------------   50 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC------------------------------------
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC------------------------------------
Confidence            3568899999999999999999984   3345788999987542                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             .......+.+|+.+++.++||||+++++++...  ..+++||||+++++|.+++...
T Consensus        51 -----------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  107 (295)
T 3ugc_A           51 -----------------------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH  107 (295)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc
Confidence                                   122345688999999999999999999987543  5689999999999999999875


Q ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 G-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~-~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      + .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       108 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~  165 (295)
T 3ugc_A          108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP  165 (295)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence            4 49999999999999999999999999999999999999999999999999998664

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=4.7e-27  Score=214.53  Aligned_cols=156  Identities=25%  Similarity=0.316  Sum_probs=133.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                      
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~--------------------------------------   71 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDT-VRERIVALKLMSETL--------------------------------------   71 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECGGGG--------------------------------------
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEc-CCCeEEEEEecCccc--------------------------------------
Confidence            35789999999999999999999855 457889999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .........+.+|+.+++.++||||+++++++..++.+|++|||+++++|.+++...+.+++
T Consensus        72 ------------------~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  133 (309)
T 2h34_A           72 ------------------SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAP  133 (309)
T ss_dssp             ------------------GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCH
T ss_pred             ------------------ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCH
Confidence                              11223346688999999999999999999999999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++....
T Consensus       134 ~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          134 PRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence            99999999999999999999999999999999999999999999999876543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=2.5e-27  Score=216.42  Aligned_cols=152  Identities=26%  Similarity=0.414  Sum_probs=129.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ....+|++.+.||+|+||.||++...   ++.+|+|++....                                      
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~~---~~~vavK~~~~~~--------------------------------------   72 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEWH---GSDVAVKILMEQD--------------------------------------   72 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEECCCC--------------------------------------
T ss_pred             CChhHceeeeEeecCCCeEEEEEEEC---CCcEEEEEecCCC--------------------------------------
Confidence            45688999999999999999999853   6679999886531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC---
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN---  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---  302 (362)
                                         ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++.....   
T Consensus        73 -------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  133 (309)
T 3p86_A           73 -------------------FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ  133 (309)
T ss_dssp             -------------------CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHH
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCC
Confidence                               1122345688999999999999999999999999999999999999999999986543   


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++|  |+||||||+||+++.++.+||+|||+++...
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA  190 (309)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence            999999999999999999999999  9999999999999999999999999997543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=1.6e-27  Score=220.48  Aligned_cols=154  Identities=27%  Similarity=0.389  Sum_probs=135.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ...++|.+.+.||+|+||.||++.+.+    .+++.+|+|.+.+..                                  
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------------------------   89 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----------------------------------   89 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----------------------------------
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----------------------------------
Confidence            356889999999999999999999764    345789999886431                                  


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                              .......+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++... 
T Consensus        90 ------------------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  145 (343)
T 1luf_A           90 ------------------------SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS  145 (343)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             ------------------------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhC
Confidence                                    1223456889999999999999999999999999999999999999999999763 


Q ss_pred             -----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 -----------------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 -----------------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                             ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  225 (343)
T 1luf_A          146 PHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  225 (343)
T ss_dssp             C----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHT
T ss_pred             cccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccc
Confidence                                   468999999999999999999999999999999999999999999999999997653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=5e-27  Score=210.49  Aligned_cols=156  Identities=28%  Similarity=0.462  Sum_probs=138.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||.+.+. .+++.+|+|.+....                                      
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~--------------------------------------   48 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQ-LTGHKVAVKILNRQK--------------------------------------   48 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHH--------------------------------------
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEEC-CCCceEEEEEecccc--------------------------------------
Confidence            45789999999999999999999865 457899999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .........+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++...+.+++
T Consensus        49 ------------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  110 (276)
T 2h6d_A           49 ------------------IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE  110 (276)
T ss_dssp             ------------------HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCH
T ss_pred             ------------------ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCH
Confidence                              11122345678999999999999999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++....
T Consensus       111 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A          111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            99999999999999999999999999999999999999999999999987643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=3.4e-27  Score=228.76  Aligned_cols=154  Identities=30%  Similarity=0.536  Sum_probs=136.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|++.+...                                       
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~---------------------------------------   64 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQV---------------------------------------   64 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTC---------------------------------------
T ss_pred             cCceEEeeEEecCCCEEEEEEEEC-CCCCEEEEEEEEhhhc---------------------------------------
Confidence            357999999999999999999855 5688999999865421                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+.+...+.+++..
T Consensus        65 -----------------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  127 (484)
T 3nyv_A           65 -----------------KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD  127 (484)
T ss_dssp             -----------------CBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHH
T ss_pred             -----------------ccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHH
Confidence                             112234568899999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|+.+..
T Consensus       128 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          128 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            99999999999999999999999999999999   4678999999999987654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=9.1e-27  Score=208.99  Aligned_cols=151  Identities=32%  Similarity=0.495  Sum_probs=134.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .++..+|+|.+.+..                                        
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~----------------------------------------   46 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYF----------------------------------------   46 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeC-CCCcEEEEEeehhhc----------------------------------------
Confidence            457999999999999999999865 457789999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...+.+++..
T Consensus        47 -------------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  107 (277)
T 3f3z_A           47 -------------------VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD  107 (277)
T ss_dssp             -------------------CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHH
T ss_pred             -------------------cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHH
Confidence                               1123567889999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+||++   +.++.++|+|||+++.+..
T Consensus       108 ~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A          108 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            99999999999999999999999999999999   7788999999999987643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.95  E-value=5.5e-27  Score=214.90  Aligned_cols=151  Identities=25%  Similarity=0.400  Sum_probs=117.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   42 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNK-TTGVYVALKEVKLDS---------------------------------------   42 (317)
T ss_dssp             ----------------CEEEEEECS-SSCCEEEEEEEECCS---------------------------------------
T ss_pred             cccceeEeeEECCCCCEEEEEEEEC-CCCcEEEEEEeeccc---------------------------------------
Confidence            3578999999999999999999854 568899999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc------
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK------  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------  300 (362)
                                         .......+.+|+.+++.++||||+++++++..++.+|+||||++ ++|.+++...      
T Consensus        43 -------------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~  102 (317)
T 2pmi_A           43 -------------------EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTP  102 (317)
T ss_dssp             -------------------TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCC
T ss_pred             -------------------ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccc
Confidence                               11123457789999999999999999999999999999999996 6999988753      


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       103 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A          103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            358999999999999999999999999999999999999999999999999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=1.3e-26  Score=208.76  Aligned_cols=153  Identities=28%  Similarity=0.464  Sum_probs=135.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   43 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKK----------------------------------------   43 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEc-CCCceEEEEEeeccc----------------------------------------
Confidence            478999999999999999999855 457889999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++..++..|++|||+++++|.+.+.....+++..
T Consensus        44 -----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~  106 (284)
T 3kk8_A           44 -----------------LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD  106 (284)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             -----------------CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHH
Confidence                             122234567899999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc---EEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~---~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+||+++.++.   +||+|||++.....
T Consensus       107 ~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A          107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            9999999999999999999999999999999986655   99999999977654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=6.1e-27  Score=218.80  Aligned_cols=148  Identities=19%  Similarity=0.247  Sum_probs=127.3

Q ss_pred             cccCcEEEEEecccceecEEEEEe----cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQI----AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++.+    ....++.+|+|.+.+.                                    
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------------------------------------  106 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------------------------------------  106 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------------------------------------
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------------------------------------
Confidence            346799999999999999999952    3345788999988543                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC---CcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN---CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                                ....+..|+.++..+.   ||||+++++++...+..|+||||+++++|.+++..
T Consensus       107 --------------------------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          107 --------------------------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             --------------------------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHH
T ss_pred             --------------------------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHH
Confidence                                      1234567777777775   99999999999999999999999999999999974


Q ss_pred             -----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-----------CCcEEEEecccceec
Q psy14740        300 -----KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-----------SGYVKLVDFGFAKKL  356 (362)
Q Consensus       300 -----~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-----------~~~~kl~DFG~a~~~  356 (362)
                           ...+++..+..++.|++.||.|||++||+||||||+|||++.           ++.+||+|||+|+.+
T Consensus       161 ~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~  233 (365)
T 3e7e_A          161 YKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM  233 (365)
T ss_dssp             HHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred             hhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence                 356999999999999999999999999999999999999988           899999999999765

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=5e-27  Score=214.38  Aligned_cols=155  Identities=22%  Similarity=0.377  Sum_probs=134.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ...++|.+.+.||+|+||.||++.+..    ..++.+|+|.+...                                   
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-----------------------------------   64 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-----------------------------------   64 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-----------------------------------
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-----------------------------------
Confidence            356789999999999999999998632    33478999987542                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             ........+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++....
T Consensus        65 -----------------------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  121 (314)
T 2ivs_A           65 -----------------------ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR  121 (314)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTT
T ss_pred             -----------------------CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHh
Confidence                                   112234568899999999999999999999999999999999999999999998643


Q ss_pred             C------------------------CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 N------------------------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~------------------------l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .                        +++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~  201 (314)
T 2ivs_A          122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY  201 (314)
T ss_dssp             TSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECT
T ss_pred             hccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccc
Confidence            2                        8899999999999999999999999999999999999999999999999998764


Q ss_pred             C
Q psy14740        358 G  358 (362)
Q Consensus       358 ~  358 (362)
                      .
T Consensus       202 ~  202 (314)
T 2ivs_A          202 E  202 (314)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.94  E-value=8.8e-27  Score=219.19  Aligned_cols=152  Identities=26%  Similarity=0.428  Sum_probs=133.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~---------------------------------------   88 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPY---------------------------------------   88 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCS---------------------------------------
T ss_pred             cccceEEEEEEecCCCEEEEEEEEC-CCCCEEEEEEecccc---------------------------------------
Confidence            3578999999999999999999855 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                          ......+.+|+.+|+.++||||+++++++.+...+|+||||+++++|.+++.... .+++
T Consensus        89 --------------------~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~  148 (387)
T 1kob_A           89 --------------------PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE  148 (387)
T ss_dssp             --------------------HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCH
T ss_pred             --------------------hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCH
Confidence                                1122457899999999999999999999999999999999999999999987643 6999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.  ++.+||+|||+++.+..
T Consensus       149 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            999999999999999999999999999999999974  47799999999987754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=5.1e-27  Score=217.40  Aligned_cols=147  Identities=28%  Similarity=0.469  Sum_probs=129.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~----------------------------------------   59 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSK----------------------------------------   59 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTT----------------------------------------
T ss_pred             cccEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEccc----------------------------------------
Confidence            467999999999999999999865 468899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                             ....+|++++..+ +||||+++++++.+++.+|+||||++|++|.+.+...+.+++.
T Consensus        60 -----------------------~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~  116 (342)
T 2qr7_A           60 -----------------------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSER  116 (342)
T ss_dssp             -----------------------CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHH
T ss_pred             -----------------------CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence                                   1235688888887 7999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC----CcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++||+||||||+|||+..+    +.+||+|||+++.+..
T Consensus       117 ~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A          117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            999999999999999999999999999999998543    3599999999987643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=6.1e-27  Score=209.29  Aligned_cols=149  Identities=26%  Similarity=0.384  Sum_probs=132.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+..  ++.+|+|.+.+..                                       
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---------------------------------------   46 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGA---------------------------------------   46 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEEECTTS---------------------------------------
T ss_pred             ChhhceeeheecCCCccEEEEEEecC--CCeEEEEEecccc---------------------------------------
Confidence            45789999999999999999998653  6679999886531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                           ...+.+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++... ..+++
T Consensus        47 ---------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  105 (269)
T 4hcu_A           47 ---------------------MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA  105 (269)
T ss_dssp             ---------------------BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCH
T ss_pred             ---------------------cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCH
Confidence                                 11245789999999999999999999999999999999999999999999754 45899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       106 ~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A          106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccc
Confidence            9999999999999999999999999999999999999999999999997553

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=8.6e-27  Score=213.91  Aligned_cols=157  Identities=24%  Similarity=0.412  Sum_probs=136.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+.+....                                      
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~--------------------------------------   51 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSR--------------------------------------   51 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSS--------------------------------------
T ss_pred             hccEEEeeEeeecCCEEEEEEEEC-CCCeEEEEEEEeccccc--------------------------------------
Confidence            356999999999999999999865 45889999998764210                                      


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     ..........+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++...+.+++..
T Consensus        52 ---------------~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  116 (321)
T 2a2a_A           52 ---------------ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE  116 (321)
T ss_dssp             ---------------SCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHH
T ss_pred             ---------------ccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHH
Confidence                           00011134568899999999999999999999999999999999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+||||||+||+++.++    .++|+|||+++.+..
T Consensus       117 ~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~  171 (321)
T 2a2a_A          117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence            999999999999999999999999999999999887    799999999987654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=1.4e-26  Score=208.52  Aligned_cols=154  Identities=21%  Similarity=0.377  Sum_probs=132.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   48 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPL----------------------------------------   48 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCC----------------------------------------
T ss_pred             cchhhhhhhhcCCCceEEEEEEEc-CCCceEEEEEecccc----------------------------------------
Confidence            467999999999999999999865 457899999886531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----CC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----GN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~  302 (362)
                                       ........+.+|+..+..+ +||||+++++++.+++..|+||||+++++|.+++...    ..
T Consensus        49 -----------------~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  111 (289)
T 1x8b_A           49 -----------------AGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY  111 (289)
T ss_dssp             -----------------TTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCC
T ss_pred             -----------------cccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccC
Confidence                             1122345678899999998 9999999999999999999999999999999999764    56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-------------------CcEEEEecccceecCCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-------------------GYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-------------------~~~kl~DFG~a~~~~~~  359 (362)
                      +++..++.++.|++.||.|||++||+||||||+||+++.+                   ..++|+|||+++....+
T Consensus       112 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP  187 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc
Confidence            9999999999999999999999999999999999999844                   47999999999877543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=4.1e-27  Score=212.51  Aligned_cols=153  Identities=19%  Similarity=0.191  Sum_probs=132.2

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCC------CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHH
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPS------RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFN  218 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~  218 (362)
                      ....++|.+.+.||+|+||.||++.+.....      ..+|+|.+.+.                                
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--------------------------------   51 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--------------------------------   51 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--------------------------------
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--------------------------------
Confidence            3456889999999999999999998654321      45888877432                                


Q ss_pred             hhccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHH
Q psy14740        219 QLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  298 (362)
                                                 .......+.+|+.+++.++||||+++++++..++..|+||||+++++|.+++.
T Consensus        52 ---------------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  104 (289)
T 4fvq_A           52 ---------------------------HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK  104 (289)
T ss_dssp             ---------------------------GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHH
T ss_pred             ---------------------------cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHH
Confidence                                       12233568899999999999999999999999999999999999999999998


Q ss_pred             hcCC-CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc--------EEEEecccceec
Q psy14740        299 DKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY--------VKLVDFGFAKKL  356 (362)
Q Consensus       299 ~~~~-l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~--------~kl~DFG~a~~~  356 (362)
                      ..+. +++..+..++.|++.||.|||++||+||||||+||+++.++.        +||+|||+++..
T Consensus       105 ~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A          105 KNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             HTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred             hCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence            7554 999999999999999999999999999999999999998877        999999999755

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=4.4e-27  Score=216.64  Aligned_cols=153  Identities=24%  Similarity=0.365  Sum_probs=130.0

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                      
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~--------------------------------------   71 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDT-VTNETVAIKRIRLEH--------------------------------------   71 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECCCCC--------------------------------------
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEEC-CCCceEEEEEEcccc--------------------------------------
Confidence            35789999999999999999999855 458899999986431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         ........+.+|+.+++.++||||+++++++.+++.+|+||||++ ++|.+++.....+++
T Consensus        72 -------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~  131 (329)
T 3gbz_A           72 -------------------EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSM  131 (329)
T ss_dssp             ---------------------------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCH
T ss_pred             -------------------cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCH
Confidence                               111223456789999999999999999999999999999999995 699999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-----CCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-----TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-----~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++     .++.+||+|||+++.+.
T Consensus       132 ~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            99999999999999999999999999999999995     44569999999997654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=1.1e-26  Score=226.23  Aligned_cols=165  Identities=29%  Similarity=0.470  Sum_probs=134.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|++.+....... .                                
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~-~--------------------------------   79 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGR-Y--------------------------------   79 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEC-----------------------------------------
T ss_pred             cccceEEEeEecccCCeEEEEEEEC-CCCcEEEEEEEEhhhccccc-c--------------------------------
Confidence            3578999999999999999999965 46789999998764211000 0                                


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                   .............+.+|+.+++.++||||+++++++.++..+|+||||+++++|.+.+...+.+++.
T Consensus        80 -------------~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~  146 (504)
T 3q5i_A           80 -------------SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC  146 (504)
T ss_dssp             ---------------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHH
T ss_pred             -------------cccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHH
Confidence                         0000111234466889999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.++   .+||+|||+|+.+..
T Consensus       147 ~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  201 (504)
T 3q5i_A          147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK  201 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC
Confidence            9999999999999999999999999999999998776   699999999987643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.94  E-value=7.4e-27  Score=226.93  Aligned_cols=152  Identities=32%  Similarity=0.545  Sum_probs=130.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .++..+|+|++.+...                                        
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~----------------------------------------   75 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSV----------------------------------------   75 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEET-TTCCEEEEEEEEC-------------------------------------------
T ss_pred             cCeEEeeEEecCCCEEEEEEEEC-CCCcEEEEEEEecccc----------------------------------------
Confidence            46999999999999999999865 4578899999865411                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                       .......+.+|+.+++.++||||+++++++.+...+|+||||+++++|.+.+.....+++..+
T Consensus        76 -----------------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~  138 (494)
T 3lij_A           76 -----------------STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA  138 (494)
T ss_dssp             -------------------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             -----------------CchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence                             111235678999999999999999999999999999999999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++||+||||||+|||++.   ++.+||+|||+|+.+..
T Consensus       139 ~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          139 AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            999999999999999999999999999999976   45599999999987643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=2.4e-28  Score=225.73  Aligned_cols=156  Identities=19%  Similarity=0.212  Sum_probs=125.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+   +++.||+|.+.+......                                   
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~-----------------------------------   59 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLV-----------------------------------   59 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCB-----------------------------------
T ss_pred             ccccchheeeecccCceEEEEEEe---CCceEEEEEEecCCcccc-----------------------------------
Confidence            357789999999999999999986   468899999876421000                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC--------------------------Ccceeeeeeeeec---
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--------------------------CDFIVKLYKTFKD---  277 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------------------------h~~i~~~~~~~~~---  277 (362)
                                      ........+.+.+|+.+++.++                          ||||+++++++.+   
T Consensus        60 ----------------~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~  123 (336)
T 2vuw_A           60 ----------------NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKG  123 (336)
T ss_dssp             ----------------TTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTC
T ss_pred             ----------------ccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhcc
Confidence                            0011223456788999888876                          6666666666654   


Q ss_pred             ----------cceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEeecCCCCcEEecCCC---
Q psy14740        278 ----------KKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH-SRNIIYRDLKPENLLLSTSG---  343 (362)
Q Consensus       278 ----------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH-~~~iiHrDikp~NIl~~~~~---  343 (362)
                                .+.+|+||||+++|++.+.+.+ +.+++..++.++.|++.||.||| ++||+||||||+|||++.++   
T Consensus       124 ~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~  202 (336)
T 2vuw_A          124 SANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKK  202 (336)
T ss_dssp             CSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSE
T ss_pred             ccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcc
Confidence                      7889999999999977666644 56899999999999999999999 99999999999999999887   


Q ss_pred             -----------------cEEEEecccceecC
Q psy14740        344 -----------------YVKLVDFGFAKKLI  357 (362)
Q Consensus       344 -----------------~~kl~DFG~a~~~~  357 (362)
                                       .+||+|||+|+.+.
T Consensus       203 ~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          203 LHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             EEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             eeeeccCccccccCCCceEEEeeccccEecC
Confidence                             89999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.94  E-value=7.3e-27  Score=219.66  Aligned_cols=154  Identities=25%  Similarity=0.407  Sum_probs=134.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecC------CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG------DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      ..++|.+.+.||+|+||.||++.+.+      ..+..+|+|.+...                                  
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------------------------------  112 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----------------------------------  112 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT----------------------------------
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc----------------------------------
Confidence            45789999999999999999998653      22346899987543                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              ........+.+|+.+++.+ +||||+++++++...+..|+||||+++++|.+++..
T Consensus       113 ------------------------~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  168 (382)
T 3tt0_A          113 ------------------------ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA  168 (382)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             ------------------------cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHH
Confidence                                    1123346688999999999 999999999999999999999999999999999986


Q ss_pred             cC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 KG----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..                .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  243 (382)
T 3tt0_A          169 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH  243 (382)
T ss_dssp             TCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSC
T ss_pred             hcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccc
Confidence            43                489999999999999999999999999999999999999999999999999987643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=8.1e-27  Score=214.99  Aligned_cols=156  Identities=29%  Similarity=0.408  Sum_probs=135.0

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ....+++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                    
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~------------------------------------   62 (331)
T 4aaa_A           20 YFQSMEKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESD------------------------------------   62 (331)
T ss_dssp             CCBCGGGEEEEEEGGGGTTSSEEEEEET-TTCCEEEEEEEESCS------------------------------------
T ss_pred             hhhhhhhheeeeEEeecCCEEEEEEEEC-CCCceEEEEEEecCC------------------------------------
Confidence            3346889999999999999999999855 558899999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                           ........+.+|+.+++.++||||+++++++...+..|+||||+++++|.++....+.+
T Consensus        63 ---------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~  121 (331)
T 4aaa_A           63 ---------------------DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGL  121 (331)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCC
T ss_pred             ---------------------CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCC
Confidence                                 11223455788999999999999999999999999999999999999999888777789


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       122 ~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          122 DYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            999999999999999999999999999999999999999999999999997654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=7.7e-27  Score=210.15  Aligned_cols=150  Identities=26%  Similarity=0.462  Sum_probs=130.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.  .+..+|+|.+....                                      
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--------------------------------------   60 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGS--------------------------------------   60 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET--TTEEEEEEEECTTS--------------------------------------
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc--CCCeEEEEEecCCC--------------------------------------
Confidence            35678999999999999999999865  36679999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                            .....+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++.. ...++
T Consensus        61 ----------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  118 (283)
T 3gen_A           61 ----------------------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ  118 (283)
T ss_dssp             ----------------------BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCC
T ss_pred             ----------------------CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCC
Confidence                                  1124578899999999999999999999999999999999999999999976 45699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       119 ~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A          119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            99999999999999999999999999999999999999999999999997653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.94  E-value=5.5e-27  Score=215.68  Aligned_cols=146  Identities=28%  Similarity=0.462  Sum_probs=127.7

Q ss_pred             cCcEEE---EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        149 SDLRVI---TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       149 ~~~~~~---~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+|.+.   +.||+|+||.||++.+. .+++.+|+|.+.+.                                       
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~---------------------------------------   47 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHK-KSNQAFAVKIISKR---------------------------------------   47 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEET-TTCCEEEEEEEEGG---------------------------------------
T ss_pred             hccccccCCCccccCCCeEEEEEEEC-CCCCEEEEEEEChh---------------------------------------
Confidence            345554   67999999999999865 45889999988542                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                             ......+|+.+++.+. ||||+++++++.+....|+||||+++++|.+++...+.++
T Consensus        48 -----------------------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  104 (325)
T 3kn6_A           48 -----------------------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFS  104 (325)
T ss_dssp             -----------------------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCC
T ss_pred             -----------------------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCC
Confidence                                   1244678999999996 9999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~~  357 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++   .+||+|||+++...
T Consensus       105 ~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~  160 (325)
T 3kn6_A          105 ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP  160 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence            999999999999999999999999999999999998765   89999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.94  E-value=1.2e-26  Score=210.64  Aligned_cols=153  Identities=27%  Similarity=0.384  Sum_probs=131.0

Q ss_pred             ccCcEEEEEecccceecEEEEEe---cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQI---AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...|++.+.||+|+||.||++.+   ...+++.+|+|.+....                                     
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------------------------------------   62 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-------------------------------------   62 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC----------------------------------------
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-------------------------------------
Confidence            45699999999999999999984   23457889999886431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhc-C
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDK-G  301 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~  301 (362)
                                           .......+.+|+.+++.++||||+++++++...  ..+|+||||+++++|.+++... .
T Consensus        63 ---------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  121 (302)
T 4e5w_A           63 ---------------------GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN  121 (302)
T ss_dssp             -----------------------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTT
T ss_pred             ---------------------cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccc
Confidence                                 112335678999999999999999999998876  6799999999999999999654 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       122 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A          122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence            699999999999999999999999999999999999999999999999999987654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.94  E-value=5.4e-27  Score=227.43  Aligned_cols=152  Identities=27%  Similarity=0.500  Sum_probs=134.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|++.+...                                       
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~---------------------------------------   60 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASA---------------------------------------   60 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEET-TTCCEEEEEEEEHHHH---------------------------------------
T ss_pred             hcceEEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEecccc---------------------------------------
Confidence            467999999999999999999855 4588999999865311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .......+.+|+.+++.++||||+++++++.+...+|+||||+++++|.+.+...+.+++..
T Consensus        61 ------------------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  122 (486)
T 3mwu_A           61 ------------------KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD  122 (486)
T ss_dssp             ------------------BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             ------------------cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHH
Confidence                              11234568899999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec---CCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~---~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+|||++   .++.+||+|||+|+.+.
T Consensus       123 ~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999999999999999999999999995   45679999999997654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=3.1e-27  Score=221.43  Aligned_cols=154  Identities=23%  Similarity=0.355  Sum_probs=128.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ....+|.+.+.||+|+||.||++....  ..+..+|+|.+...                                     
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~-------------------------------------   84 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-------------------------------------   84 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT-------------------------------------
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc-------------------------------------
Confidence            345789999999999999999998542  34667999988543                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-C
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-N  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~  302 (362)
                                           ........+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++...+ .
T Consensus        85 ---------------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~  143 (373)
T 2qol_A           85 ---------------------YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ  143 (373)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTC
T ss_pred             ---------------------cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCC
Confidence                                 112234568899999999999999999999999999999999999999999998654 6


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            9999999999999999999999999999999999999999999999999998664

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.94  E-value=5e-27  Score=218.59  Aligned_cols=153  Identities=30%  Similarity=0.423  Sum_probs=131.9

Q ss_pred             cccCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++.+.    ..+++.+|+|.+....                                   
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------------------------------   64 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-----------------------------------   64 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-----------------------------------
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-----------------------------------
Confidence            5688999999999999999999853    2345789999885431                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccc-eEEEEEeccCCcchHHHHHhc
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             .......+.+|+.+++.+ +||||+++++++...+ .+++||||+++++|.+++...
T Consensus        65 -----------------------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           65 -----------------------THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence                                   122345688999999999 7899999999987754 499999999999999999764


Q ss_pred             CC------------------------------------------------------------------CCHHHHHHHHHH
Q psy14740        301 GN------------------------------------------------------------------FDDATTRFYTAC  314 (362)
Q Consensus       301 ~~------------------------------------------------------------------l~~~~~~~~~~q  314 (362)
                      ..                                                                  +++..+..++.|
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  201 (359)
T 3vhe_A          122 RNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ  201 (359)
T ss_dssp             TTSBCSCC------------------------------------------------------CTTTTCBCHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHH
Confidence            32                                                                  889999999999


Q ss_pred             HHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        315 VVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       315 l~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       202 l~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  244 (359)
T 3vhe_A          202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY  244 (359)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred             HHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence            9999999999999999999999999999999999999998663

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=9.3e-27  Score=214.51  Aligned_cols=148  Identities=27%  Similarity=0.408  Sum_probs=131.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   46 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNL-YTNEYVAIKLEPMKS----------------------------------------   46 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEET-TTTEEEEEEEEETTC----------------------------------------
T ss_pred             cCCeEEEEEeeccCCceEEEEEEC-CCCcEEEEEEecccc----------------------------------------
Confidence            468999999999999999999854 458899999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                           ....+.+|+.+++.+ +||||+++++++...+..|+||||+ +++|.+++... +.+++
T Consensus        47 ---------------------~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~  104 (330)
T 2izr_A           47 ---------------------RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSL  104 (330)
T ss_dssp             ---------------------SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             ---------------------chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCH
Confidence                                 123478899999999 9999999999999999999999999 99999999863 57999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc-----EEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~-----~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.     +||+|||+|+.+..
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A          105 KTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            999999999999999999999999999999999998887     99999999987643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.94  E-value=5.5e-27  Score=219.32  Aligned_cols=155  Identities=24%  Similarity=0.380  Sum_probs=132.1

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHh
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQ  219 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~  219 (362)
                      .....++|++.+.||+|+||.||++...+    ..++.+|+|.+...                                 
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---------------------------------  112 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---------------------------------  112 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---------------------------------
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---------------------------------
Confidence            34456889999999999999999998543    34568999987532                                 


Q ss_pred             hccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        220 LISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                               ........+.+|+.+++.++||||+++++++......|+||||+++++|.+++..
T Consensus       113 -------------------------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  167 (367)
T 3l9p_A          113 -------------------------CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE  167 (367)
T ss_dssp             -------------------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHH
T ss_pred             -------------------------cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHh
Confidence                                     1122334678899999999999999999999999999999999999999999986


Q ss_pred             cC-------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceec
Q psy14740        300 KG-------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKL  356 (362)
Q Consensus       300 ~~-------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~  356 (362)
                      .+       .++...++.++.|++.||.|||++||+||||||+|||++.++   .+||+|||+|+.+
T Consensus       168 ~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          168 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             HSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             hccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence            43       488999999999999999999999999999999999999554   5999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=9.9e-27  Score=212.31  Aligned_cols=154  Identities=29%  Similarity=0.403  Sum_probs=135.2

Q ss_pred             cccCcEEEEEecccceecEEEEEe----cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQI----AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++..    ...+++.+|+|.+....                                   
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-----------------------------------   65 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-----------------------------------   65 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-----------------------------------
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-----------------------------------
Confidence            457899999999999999999985    33456789999886431                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             .......+.+|+.+++.+ +||||+++++++..++..++||||+++++|.+++....
T Consensus        66 -----------------------~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  122 (313)
T 1t46_A           66 -----------------------HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR  122 (313)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             -----------------------hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence                                   112345688999999999 99999999999999999999999999999999997643


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 ------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                        .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  197 (313)
T 1t46_A          123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN  197 (313)
T ss_dssp             TTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTS
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccc
Confidence                              389999999999999999999999999999999999999999999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=9e-27  Score=215.67  Aligned_cols=153  Identities=26%  Similarity=0.439  Sum_probs=131.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++.+.+    ..+..+|+|.+....                                   
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-----------------------------------   87 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-----------------------------------   87 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------------------------------
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-----------------------------------
Confidence            46789999999999999999998632    345679999886431                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             .......+.+|+.+++.+ +||||+++++++...+.+|+||||+++++|.+++....
T Consensus        88 -----------------------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A           88 -----------------------DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             ---------------------------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhcc
Confidence                                   112345688999999999 99999999999999999999999999999999997643


Q ss_pred             -----------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 -----------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 -----------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                             .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~  223 (344)
T 1rjb_A          145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM  223 (344)
T ss_dssp             TCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGG
T ss_pred             ccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccc
Confidence                                   27899999999999999999999999999999999999999999999999998664

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=1.6e-26  Score=217.75  Aligned_cols=151  Identities=23%  Similarity=0.438  Sum_probs=123.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.||+|.+.+.                                        
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~----------------------------------------   45 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDA----------------------------------------   45 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEET-TTCCEEEEEEECC-----------------------------------------
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEEC-CCCCEEEEEEeccc----------------------------------------
Confidence            4678999999999999999999855 55889999988542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                       ...........+|+.+++.+. ||||+++++++..+  ..+|+||||++ ++|.+++.. +.+
T Consensus        46 -----------------~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~  106 (388)
T 3oz6_A           46 -----------------FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA-NIL  106 (388)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH-TCC
T ss_pred             -----------------ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHc-CCC
Confidence                             112233456788999999996 99999999998654  37999999995 799998876 579


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       107 ~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A          107 EPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            999999999999999999999999999999999999999999999999998764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.94  E-value=2.1e-26  Score=207.16  Aligned_cols=156  Identities=28%  Similarity=0.461  Sum_probs=135.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.+|+|.+.+.....                                      
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~--------------------------------------   45 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSS--------------------------------------   45 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTT--------------------------------------
T ss_pred             hhhhhHHhhcccCceEEEEEEEc-CCCCeeehHHhhhccccc--------------------------------------
Confidence            56999999999999999999865 457899999987642110                                      


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     .........+.+|+.+++.++||||+++++++......|+||||+++++|.+++.....+++..+
T Consensus        46 ---------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  110 (283)
T 3bhy_A           46 ---------------SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA  110 (283)
T ss_dssp             ---------------CSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             ---------------cccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHH
Confidence                           01112345688999999999999999999999999999999999999999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++|++||||||+||+++.++    .++|+|||+++.+..
T Consensus       111 ~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A          111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            99999999999999999999999999999998776    899999999987643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.94  E-value=1.5e-26  Score=208.67  Aligned_cols=151  Identities=27%  Similarity=0.503  Sum_probs=130.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++... .++..+|+|.+.+..                                        
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~----------------------------------------   59 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDR----------------------------------------   59 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             hhheeecceeccCCCeEEEEEEEc-cCCceEEEEEeeccc----------------------------------------
Confidence            467999999999999999999855 457889999886531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc----CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK----GNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~l  303 (362)
                                        .......+.+|+.+++.++||||+++++++.+....|+||||+++++|.+++...    ..+
T Consensus        60 ------------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  121 (285)
T 3is5_A           60 ------------------SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL  121 (285)
T ss_dssp             ------------------CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCC
T ss_pred             ------------------cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCC
Confidence                              1122456789999999999999999999999999999999999999999988543    579


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec---CCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~---~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.++.|++.||.|||++||+||||||+||+++   .++.+||+|||+++.+.
T Consensus       122 ~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999999999999999999999999999999994   46789999999997654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=7.2e-27  Score=214.44  Aligned_cols=155  Identities=23%  Similarity=0.326  Sum_probs=120.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCC--CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPS--RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|++.+.||+|+||.||++.+....+  ..+|+|.+....                                     
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------------------------------------   63 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI-------------------------------------   63 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-----------------------------------------
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc-------------------------------------
Confidence            45789999999999999999998654322  378999875431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceE------EEEEeccCCcchHHHHH
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILR  298 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~  298 (362)
                                          ........+.+|+.+++.++||||+++++++......      +++|||+++++|.+++.
T Consensus        64 --------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~  123 (323)
T 3qup_A           64 --------------------IASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL  123 (323)
T ss_dssp             ----------------------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHH
T ss_pred             --------------------cCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHH
Confidence                                1122346688999999999999999999998876654      99999999999999986


Q ss_pred             hcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        299 DKG------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       299 ~~~------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ...      .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       124 ~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             HHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             hhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccc
Confidence            532      589999999999999999999999999999999999999999999999999987643

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=1.7e-26  Score=213.07  Aligned_cols=154  Identities=25%  Similarity=0.407  Sum_probs=133.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecC------CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG------DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      ..++|.+.+.||+|+||.||++.+.+      ..+..+|+|.+...                                  
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~----------------------------------   78 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----------------------------------   78 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT----------------------------------
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC----------------------------------
Confidence            45789999999999999999998653      34567999987542                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              ........+.+|+.+++.+ +||||+++++++...+.+|+||||+++++|.+++..
T Consensus        79 ------------------------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  134 (334)
T 2pvf_A           79 ------------------------ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA  134 (334)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHT
T ss_pred             ------------------------CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHH
Confidence                                    1122345688999999999 899999999999999999999999999999999986


Q ss_pred             cC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 KG----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..                .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  209 (334)
T 2pvf_A          135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN  209 (334)
T ss_dssp             TSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTT
T ss_pred             hccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccc
Confidence            43                388999999999999999999999999999999999999999999999999987654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=9.9e-27  Score=216.11  Aligned_cols=148  Identities=29%  Similarity=0.448  Sum_probs=123.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~----------------------------------------   90 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQK-GTQKPYALKVLKKTV----------------------------------------   90 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEC------------------------------------------
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEEC-CCCcEEEEEEeccch----------------------------------------
Confidence            457999999999999999999865 457889999885431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                           ....+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++...+.+++..
T Consensus        91 ---------------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  149 (349)
T 2w4o_A           91 ---------------------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD  149 (349)
T ss_dssp             -----------------------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHH
T ss_pred             ---------------------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHH
Confidence                                 12346789999999999999999999999999999999999999999998877899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+|||++.   ++.+||+|||+++...
T Consensus       150 ~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          150 AADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             HHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            9999999999999999999999999999999975   8899999999998654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=1.4e-26  Score=215.89  Aligned_cols=154  Identities=28%  Similarity=0.467  Sum_probs=137.0

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .....++|++.+.||+|+||.||++.+. .+++.+|+|.+...                                     
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~va~K~~~~~-------------------------------------   69 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLE-------------------------------------   69 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECC-------------------------------------
T ss_pred             cccccccceeeeeecCCCCeEEEEEEEC-CCCcEEEEEEeccc-------------------------------------
Confidence            3456788999999999999999999865 45788999987543                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                           ........+.+|+.+++.++||||+++++++..++.+|+||||+++++|.+++...+.+
T Consensus        70 ---------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  128 (360)
T 3eqc_A           70 ---------------------IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI  128 (360)
T ss_dssp             ---------------------CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSC
T ss_pred             ---------------------cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCC
Confidence                                 11223456889999999999999999999999999999999999999999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++..+..++.|++.||.|||+. ||+||||||+||+++.++.++|+|||+++.+
T Consensus       129 ~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          129 PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            9999999999999999999996 9999999999999999999999999998643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.94  E-value=1.3e-26  Score=208.51  Aligned_cols=153  Identities=26%  Similarity=0.426  Sum_probs=124.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|++.+.||+|+||.||++.+...  .+..+|+|.+...                                      
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--------------------------------------   54 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--------------------------------------   54 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--------------------------------------
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--------------------------------------
Confidence            467899999999999999999986542  2446888876532                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l  303 (362)
                                          ........+.+|+.+++.++||||+++++++. .+..|+||||+++++|.+++...+ .+
T Consensus        55 --------------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~  113 (281)
T 1mp8_A           55 --------------------TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSL  113 (281)
T ss_dssp             --------------------TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTS
T ss_pred             --------------------CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCC
Confidence                                11223456889999999999999999999985 456899999999999999998654 69


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       114 ~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A          114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            9999999999999999999999999999999999999999999999999987643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=2.8e-26  Score=210.65  Aligned_cols=148  Identities=29%  Similarity=0.469  Sum_probs=130.9

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .|.....||+|+||.||++... .+++.+|+|.+....                                          
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~-~~g~~vavK~~~~~~------------------------------------------   82 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRK------------------------------------------   82 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTT------------------------------------------
T ss_pred             hhhccEEeccCCCeEEEEEEEC-CCCcEEEEEEEeccc------------------------------------------
Confidence            3677789999999999999855 458899999885431                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                       ......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++.. ..+++..+.
T Consensus        83 -----------------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~  144 (321)
T 2c30_A           83 -----------------QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIA  144 (321)
T ss_dssp             -----------------CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHH
T ss_pred             -----------------hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHH
Confidence                             11234578999999999999999999999999999999999999999998865 569999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       145 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          145 TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            9999999999999999999999999999999999999999999987643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.8e-26  Score=215.75  Aligned_cols=150  Identities=21%  Similarity=0.385  Sum_probs=125.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||.+.+. .+++.+|+|.+.+..                                        
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~----------------------------------------   62 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPF----------------------------------------   62 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEET-TTCCEEEEEECSSTT----------------------------------------
T ss_pred             cceEEEeEEeeecCCeEEEEEEEC-CCCCEEEEEEeCccc----------------------------------------
Confidence            578999999999999999999854 568899999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       .......++.+|+.+++.++||||+++++++...      ..+|+||||+ +++|.+++.. .
T Consensus        63 -----------------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~  123 (367)
T 1cm8_A           63 -----------------QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-E  123 (367)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-C
T ss_pred             -----------------cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-C
Confidence                             1123345688999999999999999999998765      3469999999 8999999876 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       124 ~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          124 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            79999999999999999999999999999999999999999999999999998764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.94  E-value=2.4e-26  Score=208.79  Aligned_cols=150  Identities=35%  Similarity=0.611  Sum_probs=130.6

Q ss_pred             cccCcEEE-EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        147 RLSDLRVI-TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       147 ~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+++|.+. +.||+|+||.||++.+. .+++.+|+|.+...                                       
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~---------------------------------------   54 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDC---------------------------------------   54 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECS---------------------------------------
T ss_pred             cccchhhcCcccccCCCeEEEEEEEc-CCCcEEEEEEeccc---------------------------------------
Confidence            46788888 77999999999999865 45889999987432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHH-hhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIM-GEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                               ....+|+.++ +..+||||+++++++..    ...+|+||||+++++|.+++...
T Consensus        55 -------------------------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (299)
T 3m2w_A           55 -------------------------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR  109 (299)
T ss_dssp             -------------------------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHC
T ss_pred             -------------------------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhc
Confidence                                     2356788887 55699999999999876    77899999999999999999875


Q ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCCCCC
Q psy14740        301 G--NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGPRY  361 (362)
Q Consensus       301 ~--~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~~~~  361 (362)
                      .  .+++..++.++.|++.||.|||++||+||||||+||+++.   ++.++|+|||+++...+..|
T Consensus       110 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (299)
T 3m2w_A          110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY  175 (299)
T ss_dssp             TTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGG
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccC
Confidence            4  5999999999999999999999999999999999999998   78899999999998876554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=1.2e-26  Score=208.03  Aligned_cols=150  Identities=28%  Similarity=0.468  Sum_probs=134.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   44 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKR----------------------------------------   44 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             ecceEEEEEeecCCCcEEEEEEEC-CCCcEEEEEEeeecc----------------------------------------
Confidence            578999999999999999999855 457889999885431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .......+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++.....+++..
T Consensus        45 ------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  106 (276)
T 2yex_A           45 ------------------AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD  106 (276)
T ss_dssp             ------------------CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHH
T ss_pred             ------------------chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHH
Confidence                              11233567899999999999999999999999999999999999999999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+
T Consensus       107 ~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A          107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            9999999999999999999999999999999999999999999999765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.94  E-value=9.7e-27  Score=213.92  Aligned_cols=150  Identities=23%  Similarity=0.353  Sum_probs=128.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+.+.||+|+||.||++.+. .+++.+|+|.+.....                                       
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~---------------------------------------   40 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSK-LTDNLVALKEIRLEHE---------------------------------------   40 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECC------------------------------------------
T ss_pred             CCceEEEEEEcCCCCEEEEEEEEC-CCCcEEEEEEEecccc---------------------------------------
Confidence            468999999999999999999865 4578899998854310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~  306 (362)
                                         ......+.+|+.+++.++||||+++++++...+.+|+||||++ ++|.+++...+ .+++.
T Consensus        41 -------------------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~  100 (324)
T 3mtl_A           41 -------------------EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH  100 (324)
T ss_dssp             ----------------------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHH
T ss_pred             -------------------cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHH
Confidence                               1111234568999999999999999999999999999999995 68998887654 58999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       101 ~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A          101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            999999999999999999999999999999999999999999999997654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=4.2e-27  Score=220.92  Aligned_cols=152  Identities=16%  Similarity=0.079  Sum_probs=124.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~----------------------------------------  110 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTE----------------------------------------  110 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC--CCCCEEEEEEEEECC----------------------------------------
T ss_pred             CceEEEcceeecCCCEEEEEEEEC-CCCcEEEEEEEeecc----------------------------------------
Confidence            467999999999999999999854 458899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHH---HHhhcCCcceeeee-------eeeeccc-----------------e
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKE---IMGEANCDFIVKLY-------KTFKDKK-----------------Y  280 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~~i~~~~-------~~~~~~~-----------------~  280 (362)
                                      .......+.+.+|+.   +++.++||||++++       +++..++                 .
T Consensus       111 ----------------~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  174 (377)
T 3byv_A          111 ----------------RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS  174 (377)
T ss_dssp             -----------------CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEES
T ss_pred             ----------------ccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEE
Confidence                            112234466889994   45556899999998       5554442                 3


Q ss_pred             EEEEEeccCCcchHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        281 LYMLMESCLGGELWTILRDKGNFDD-------ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       281 ~~lv~e~~~~~~L~~~l~~~~~l~~-------~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      .|++|||+ +|+|.+++...+.+++       ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence            89999999 7899999987655555       778889999999999999999999999999999999999999999999


Q ss_pred             eecC
Q psy14740        354 KKLI  357 (362)
Q Consensus       354 ~~~~  357 (362)
                      +...
T Consensus       254 ~~~~  257 (377)
T 3byv_A          254 VRDG  257 (377)
T ss_dssp             EETT
T ss_pred             eecC
Confidence            8643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=1e-26  Score=221.22  Aligned_cols=158  Identities=30%  Similarity=0.459  Sum_probs=130.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|++.+......                                    
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~------------------------------------  176 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIG------------------------------------  176 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGGTTC------------------------------------
T ss_pred             hccEEEEeEEeeCCCeEEEEEEEC-CCCcEEEEEEEEechhccc------------------------------------
Confidence            468999999999999999999855 5688999999876422110                                    


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     ..........+.+|+.+|+.++||||+++++++.. ...|+||||+++++|.+++...+.+++..
T Consensus       177 ---------------~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~  240 (419)
T 3i6u_A          177 ---------------SAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEAT  240 (419)
T ss_dssp             -----------------------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCCCHHH
T ss_pred             ---------------ccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCCCHHH
Confidence                           00111223457899999999999999999999865 45899999999999999988878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC---cEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG---YVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~---~~kl~DFG~a~~~~~  358 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++   .+||+|||+|+.+..
T Consensus       241 ~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~  294 (419)
T 3i6u_A          241 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE  294 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC
Confidence            999999999999999999999999999999997544   599999999986543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=1.5e-26  Score=212.48  Aligned_cols=148  Identities=21%  Similarity=0.237  Sum_probs=128.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+.   ++.||+|.+....                                       
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~---------------------------------------   59 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL---NEYVAVKIFPIQD---------------------------------------   59 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET---TEEEEEEEECGGG---------------------------------------
T ss_pred             chhhchhhheecccCceEEEEEEEC---CCEEEEEEeecCc---------------------------------------
Confidence            4678999999999999999999854   6789999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                           ........|+.+++.++||||+++++++....    .+|+||||+++++|.+++.. ..
T Consensus        60 ---------------------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~  117 (322)
T 3soc_A           60 ---------------------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NV  117 (322)
T ss_dssp             ---------------------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CC
T ss_pred             ---------------------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cC
Confidence                                 11233456888899999999999999987643    47999999999999999976 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHC----------CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSR----------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~----------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||++          ||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       118 ~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~  183 (322)
T 3soc_A          118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA  183 (322)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccccc
Confidence            99999999999999999999999          999999999999999999999999999987643

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.94  E-value=1.1e-26  Score=209.50  Aligned_cols=152  Identities=25%  Similarity=0.390  Sum_probs=135.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. ..+..+|+|.+...                                        
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~----------------------------------------   49 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKED----------------------------------------   49 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEG-GGTEEEEEEEECSC----------------------------------------
T ss_pred             cccceeEEeecCCCCceeEEEeEec-CCCEEEEEEecCcC----------------------------------------
Confidence            5678999999999999999999965 45778999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                          ......+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++...  ..++
T Consensus        50 --------------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~  109 (288)
T 3kfa_A           50 --------------------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS  109 (288)
T ss_dssp             --------------------STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSC
T ss_pred             --------------------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCcc
Confidence                                112356789999999999999999999999999999999999999999999864  3489


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++....+
T Consensus       110 ~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A          110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             HhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            9999999999999999999999999999999999999999999999999866543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.5e-26  Score=218.65  Aligned_cols=152  Identities=25%  Similarity=0.333  Sum_probs=131.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+.+.||+|+||.||++.+. .+++.+|+|.+.....                                       
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~---------------------------------------   47 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISF---------------------------------------   47 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGG---------------------------------------
T ss_pred             CCceEEEEEEEcCCCeEEEEEEEC-CCCcEEEEEEeccccc---------------------------------------
Confidence            467999999999999999999865 4588999999864311                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--eEEEEEeccCCcchHHHHHhcC---C
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDKG---N  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~---~  302 (362)
                                         ......+.+|+.+++.++||||+++++++...+  ..|+||||+++++|.+++....   .
T Consensus        48 -------------------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~  108 (396)
T 4eut_A           48 -------------------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG  108 (396)
T ss_dssp             -------------------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTC
T ss_pred             -------------------cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccC
Confidence                               112345678999999999999999999987654  7899999999999999997643   3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe----cCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~----~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.+..
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~  168 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence            9999999999999999999999999999999999999    6777899999999987643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=2.2e-26  Score=211.18  Aligned_cols=158  Identities=31%  Similarity=0.461  Sum_probs=129.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+......                                    
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~------------------------------------   51 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIG------------------------------------   51 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECC------------------------------------------
T ss_pred             hhceeEeeEEecCCCEEEEEEEEc-CCCcEEEEEEeehhhhhhc------------------------------------
Confidence            367999999999999999999855 4578999999866421100                                    


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                     ..........+.+|+.+++.++||||+++++++..++ .|+||||+++++|.+++.....+++..
T Consensus        52 ---------------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~  115 (322)
T 2ycf_A           52 ---------------SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEAT  115 (322)
T ss_dssp             ------------------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHH
T ss_pred             ---------------ccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHH
Confidence                           0011123345789999999999999999999987665 899999999999999998878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc---EEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~---~kl~DFG~a~~~~~  358 (362)
                      ++.++.|++.||.|||++||+||||||+||+++.++.   +||+|||+++.+..
T Consensus       116 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  169 (322)
T 2ycf_A          116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE  169 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc
Confidence            9999999999999999999999999999999987654   99999999987643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.94  E-value=8.7e-27  Score=226.34  Aligned_cols=152  Identities=24%  Similarity=0.380  Sum_probs=134.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. ..+..+|+|.+....                                       
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~---------------------------------------  257 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDT---------------------------------------  257 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEG-GGTEEEEEEECCSSS---------------------------------------
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEc-CCCeEEEEEEecCcc---------------------------------------
Confidence            4578999999999999999999865 347789999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           .....+.+|+.+|+.++||||+++++++...+.+|+||||+++++|.+++...  ..++
T Consensus       258 ---------------------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~  316 (495)
T 1opk_A          258 ---------------------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS  316 (495)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSC
T ss_pred             ---------------------cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCC
Confidence                                 12356889999999999999999999999999999999999999999999864  3589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.+.
T Consensus       317 ~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  371 (495)
T 1opk_A          317 AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD  371 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence            9999999999999999999999999999999999999999999999999876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.94  E-value=1.9e-26  Score=222.09  Aligned_cols=151  Identities=24%  Similarity=0.369  Sum_probs=125.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.+.                                        
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~----------------------------------------   98 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRP----------------------------------------   98 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEESG----------------------------------------
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEECcc----------------------------------------
Confidence            3678999999999999999999855 45888999998653                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                       ........++.+|+.+++.++||||+++++++...      ..+|+||||++ ++|.+.+.. 
T Consensus        99 -----------------~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~-~~l~~~~~~-  159 (464)
T 3ttj_A           99 -----------------FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM-  159 (464)
T ss_dssp             -----------------GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS-EEHHHHHTS-
T ss_pred             -----------------ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCC-CCHHHHHhh-
Confidence                             11223345678999999999999999999998654      46899999995 567776653 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                       .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       160 -~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          160 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             -cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence             499999999999999999999999999999999999999999999999999987643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.94  E-value=2.6e-26  Score=217.18  Aligned_cols=146  Identities=35%  Similarity=0.584  Sum_probs=125.8

Q ss_pred             cccCcEEE-EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        147 RLSDLRVI-TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       147 ~~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+++|.+. +.||.|+||.||++.+. .+++.+|+|.+...                                       
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~-~~~~~vAiK~~~~~---------------------------------------   98 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDC---------------------------------------   98 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECS---------------------------------------
T ss_pred             ccccceeccceeeeccCeEEEEEEEC-CCCCEEEEEEeCcc---------------------------------------
Confidence            46778887 68999999999999854 56889999987432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                               ..+.+|+.++.. .+||||+++++++..    ..++|+||||+++++|.+++...
T Consensus        99 -------------------------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  153 (400)
T 1nxk_A           99 -------------------------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR  153 (400)
T ss_dssp             -------------------------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC
T ss_pred             -------------------------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHh
Confidence                                     235678887744 589999999998875    67799999999999999999864


Q ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecC
Q psy14740        301 G--NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~--~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~  357 (362)
                      +  .+++..++.++.|++.||.|||++||+||||||+|||++.   ++.+||+|||+++...
T Consensus       154 ~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          154 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             ---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence            3  5999999999999999999999999999999999999987   7889999999998764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=3.9e-26  Score=210.00  Aligned_cols=153  Identities=31%  Similarity=0.480  Sum_probs=133.3

Q ss_pred             cccCcEEEEEecccceecEEEEEe---cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQI---AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ..++|++.+.||+|+||.||++..   ....++.+|+|.+...                                     
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-------------------------------------   63 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-------------------------------------   63 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-------------------------------------
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-------------------------------------
Confidence            457899999999999999999985   2345778999987543                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--ccceEEEEEeccCCcchHHHHHhc-
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--DKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                            .....+.+.+|+.+++.++||||+++++++.  ....+|+||||+++++|.+++... 
T Consensus        64 ----------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  121 (327)
T 3lxl_A           64 ----------------------GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR  121 (327)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG
T ss_pred             ----------------------CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc
Confidence                                  1223356889999999999999999999875  556799999999999999999863 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       122 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          122 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            4699999999999999999999999999999999999999999999999999987643

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=6.8e-27  Score=230.10  Aligned_cols=108  Identities=15%  Similarity=0.197  Sum_probs=99.9

Q ss_pred             hhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q psy14740        248 RQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN  326 (362)
Q Consensus       248 ~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~  326 (362)
                      ...+.+.+|+++|+++ .||||+++++++++++.+||||||++|++|.+++.+.+++++.   .|+.||+.||.|+|++|
T Consensus       283 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          283 RNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQG  359 (569)
T ss_dssp             HHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCC
Confidence            4556799999999999 7999999999999999999999999999999999988888765   47899999999999999


Q ss_pred             cEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        327 IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       327 iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ||||||||+|||++.+|.+||+|||+|+.+..
T Consensus       360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            99999999999999999999999999987654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=3.3e-26  Score=206.95  Aligned_cols=154  Identities=25%  Similarity=0.371  Sum_probs=132.7

Q ss_pred             cccCcEEEE-EecccceecEEEEEec-CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVIT-TLGVGGFGRVELVQIA-GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~-~lg~G~~g~v~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+|.+.+ .||+|+||.||++.+. ...++.+|+|.+....                                     
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------------------------------------   56 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-------------------------------------   56 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------------------------------------
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-------------------------------------
Confidence            457899998 9999999999999643 3446789999886431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                          ........+.+|+.+++.++||||+++++++ ..+..|+||||+++++|.+++...+.++
T Consensus        57 --------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~  115 (291)
T 1xbb_A           57 --------------------NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK  115 (291)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCC
T ss_pred             --------------------cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCC
Confidence                                1122346688999999999999999999998 5567899999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       116 ~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (291)
T 1xbb_A          116 DKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  169 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence            999999999999999999999999999999999999999999999999987643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=4.6e-26  Score=206.49  Aligned_cols=161  Identities=24%  Similarity=0.362  Sum_probs=137.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.....-..                                   
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~-----------------------------------   58 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSF-----------------------------------   58 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTC-----------------------------------
T ss_pred             hhhccceeeeecCCCceEEEEEEEc-CcCceEEEEEEeccccccc-----------------------------------
Confidence            4688999999999999999999865 4578999999865411000                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                     ...........+.+|+.+++.+. ||||+++++++...+..|+||||+++++|.+++.....+++
T Consensus        59 ---------------~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  123 (298)
T 1phk_A           59 ---------------SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE  123 (298)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             ---------------CHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCH
Confidence                           00011223456789999999995 99999999999999999999999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       124 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  176 (298)
T 1phk_A          124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  176 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence            99999999999999999999999999999999999999999999999987643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.94  E-value=3e-26  Score=212.33  Aligned_cols=150  Identities=26%  Similarity=0.428  Sum_probs=131.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-.+|++.+.||+|+||.||++.+.  +++.+|+|.+....                                       
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~---------------------------------------   45 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEE---------------------------------------   45 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTT---------------------------------------
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccc---------------------------------------
Confidence            4567999999999999999999853  47789999886431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC--cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC--DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        ........+.+|+.++..++|  |||+++++++.....+|+|||+ .+++|.+++...+.++
T Consensus        46 ------------------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~  106 (343)
T 3dbq_A           46 ------------------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSID  106 (343)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCC
T ss_pred             ------------------cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCC
Confidence                              112234568899999999976  9999999999999999999995 5899999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||+++.+.
T Consensus       107 ~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A          107 PWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            999999999999999999999999999999999996 6789999999998653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=2.8e-26  Score=212.91  Aligned_cols=151  Identities=28%  Similarity=0.407  Sum_probs=131.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                         
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~-----------------------------------------   91 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSG-----------------------------------------   91 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEESCS-----------------------------------------
T ss_pred             hheeeeeEEccCCCEEEEEEEEc-cCCeEEEEEEEcccc-----------------------------------------
Confidence            45899999999999999999854 457889999886431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                     .........+.+|+.+++.++||||+++++++..++..|+||||++ |+|.+++.. ...+++..
T Consensus        92 ---------------~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~  155 (348)
T 1u5q_A           92 ---------------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE  155 (348)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHH
T ss_pred             ---------------ccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHH
Confidence                           1122334568899999999999999999999999999999999995 688887754 45799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       156 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            99999999999999999999999999999999999999999999997654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=5.1e-26  Score=207.52  Aligned_cols=157  Identities=23%  Similarity=0.417  Sum_probs=129.9

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ....+.+|++.+.||+|+||.||++... .+++.+|+|.+....                                    
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~------------------------------------   69 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFD------------------------------------   69 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEET-TTCCEEEEEEECTTS------------------------------------
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEc-CCCceEEEEeeehhh------------------------------------
Confidence            3346789999999999999999999855 457899999886531                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----  299 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----  299 (362)
                                          .........+.+|+.+++.++||||+++++++...+..++||||+++++|.+++..    
T Consensus        70 --------------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  129 (310)
T 2wqm_A           70 --------------------LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ  129 (310)
T ss_dssp             --------------------SCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHT
T ss_pred             --------------------ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhccc
Confidence                                11223446688999999999999999999999999999999999999999998864    


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+.
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            3468999999999999999999999999999999999999999999999999987654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=3.6e-26  Score=212.35  Aligned_cols=152  Identities=22%  Similarity=0.400  Sum_probs=129.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   54 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMEN---------------------------------------   54 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEET-TTCCEEEEEECCCSS---------------------------------------
T ss_pred             cccceeEEEEEecCCCcEEEEEEEC-CCCCEEEEEEEeccc---------------------------------------
Confidence            5789999999999999999999965 457899999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--------cceEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--------KKYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~  298 (362)
                                        ........+.+|+.+++.++||||+++++++..        .+.+|+||||++ ++|.+.+.
T Consensus        55 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~  115 (351)
T 3mi9_A           55 ------------------EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLS  115 (351)
T ss_dssp             ------------------CSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHH
T ss_pred             ------------------ccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHh
Confidence                              111223456789999999999999999999876        456899999995 57777666


Q ss_pred             hc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        299 DK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       116 ~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          116 NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence            43 569999999999999999999999999999999999999999999999999998764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=2.4e-26  Score=210.25  Aligned_cols=149  Identities=24%  Similarity=0.449  Sum_probs=129.8

Q ss_pred             ccCcEEE-EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        148 LSDLRVI-TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       148 ~~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+.|.+. +.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   50 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQP---------------------------------------   50 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECS-SSCCEEEEEEEECCS---------------------------------------
T ss_pred             ceeEEecCceecCCceEEEEEEEEc-CCCcEEEEEEEeeCc---------------------------------------
Confidence            4578885 67999999999999854 468899999985431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                          ......+.+|+.++..+ +||||+++++++.+++.+|+||||+++++|.+++...+.+++
T Consensus        51 --------------------~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  110 (316)
T 2ac3_A           51 --------------------GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE  110 (316)
T ss_dssp             --------------------SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             --------------------chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCH
Confidence                                11235678899999885 799999999999999999999999999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc---EEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~---~kl~DFG~a~~~  356 (362)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.   +||+|||+++.+
T Consensus       111 ~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A          111 LEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            999999999999999999999999999999999987765   999999998765

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.94  E-value=2.4e-26  Score=211.55  Aligned_cols=153  Identities=23%  Similarity=0.389  Sum_probs=125.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCce----eeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSF----ALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      +..++|++.+.||+|+||.||++.+.. +++.+    |+|.+...                                   
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~-----------------------------------   55 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREA-----------------------------------   55 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC--------------------------------------
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcC-CCceEEEEEEEeecccc-----------------------------------
Confidence            456889999999999999999998653 34445    55544321                                   


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                             ........+.+|+.+++.++||||+++++++..+. .+++++++++++|.+++... 
T Consensus        56 -----------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~  111 (327)
T 3poz_A           56 -----------------------TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK  111 (327)
T ss_dssp             ---------------------------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHST
T ss_pred             -----------------------cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcC
Confidence                                   11223456889999999999999999999998765 78899999999999999864 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       112 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A          112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence            5699999999999999999999999999999999999999999999999999986643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=2.4e-26  Score=211.29  Aligned_cols=157  Identities=21%  Similarity=0.282  Sum_probs=128.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.. +++.+++|+..+.-.                                     
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~~K~~~-------------------------------------   51 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIE-------------------------------------   51 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECC-TTCSCCEEEEEEEEC-------------------------------------
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcC-CCceEEEEEEEEecc-------------------------------------
Confidence            356789999999999999999998654 455544443322100                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                       ..........+.+|+.+++.++||||+++++++. .+..++||||+++++|.+++... +.++
T Consensus        52 -----------------~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~  113 (325)
T 3kex_A           52 -----------------DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALG  113 (325)
T ss_dssp             -----------------CTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSC
T ss_pred             -----------------ccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCC
Confidence                             0011122345678999999999999999999886 45689999999999999999764 4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       114 ~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  167 (325)
T 3kex_A          114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP  167 (325)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence            999999999999999999999999999999999999999999999999987643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=2.1e-26  Score=211.86  Aligned_cols=156  Identities=25%  Similarity=0.444  Sum_probs=133.4

Q ss_pred             hhhhhccccCcEEEEEecccceecEEEEEecCCCCCc--eeeeeeccccccccccccccceeeeCCCCceEEEeehhhHH
Q psy14740        141 EEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRS--FALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFN  218 (362)
Q Consensus       141 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~  218 (362)
                      ..++....++|++.+.||+|+||.||++.+.. ++..  +++|.+...                                
T Consensus        17 ~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~~v~iK~~~~~--------------------------------   63 (327)
T 1fvr_A           17 TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEY--------------------------------   63 (327)
T ss_dssp             CCSSBCCGGGCEEEEEEECGGGCEEEEEEEEE-TTEEEEEEEEEEECC--------------------------------
T ss_pred             cccccccHHHccceeeeecCCCceEEEEEEcc-CCcccceeeeeeccc--------------------------------
Confidence            34566678999999999999999999998654 3443  488876532                                


Q ss_pred             hhccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHH
Q psy14740        219 QLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL  297 (362)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  297 (362)
                                                ........+.+|+.+++.+ +||||+++++++.+.+.+|+||||+++++|.+++
T Consensus        64 --------------------------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l  117 (327)
T 1fvr_A           64 --------------------------ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL  117 (327)
T ss_dssp             --------------------------------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHH
T ss_pred             --------------------------cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHH
Confidence                                      1112335578999999999 9999999999999999999999999999999999


Q ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        298 RDKG----------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       298 ~~~~----------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ...+                .+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~  191 (327)
T 1fvr_A          118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG  191 (327)
T ss_dssp             HTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             HhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcc
Confidence            7653                689999999999999999999999999999999999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.94  E-value=3.5e-26  Score=209.00  Aligned_cols=151  Identities=24%  Similarity=0.361  Sum_probs=126.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                         
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~-----------------------------------------   94 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPF-----------------------------------------   94 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTSCEEEEEEESSSC-----------------------------------------
T ss_pred             hheeeeheeccCCCeEEEEEEEC-CCCeEEEEEEecccc-----------------------------------------
Confidence            57999999999999999999865 458899999875431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                      ...........|+..+..+ +||||+++++++.+++.+|+||||+ +++|.+++... ..+++.
T Consensus        95 ----------------~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~  157 (311)
T 3p1a_A           95 ----------------RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEA  157 (311)
T ss_dssp             ----------------CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHH
T ss_pred             ----------------cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHH
Confidence                            1111223344555555554 9999999999999999999999999 77898888764 459999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       158 ~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          158 QVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999999999999999999999999999999999999999999999987643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=5.1e-26  Score=207.42  Aligned_cols=155  Identities=24%  Similarity=0.338  Sum_probs=126.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+......                                     
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~-------------------------------------   48 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVPNGG-------------------------------------   48 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECT-TTCCEEEEEEEEEECCC-------------------------------------
T ss_pred             cccceEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEeccccc-------------------------------------
Confidence            4578999999999999999999854 45889999998653110                                     


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~  298 (362)
                                       .........+.+|+.+++.+   +||||+++++++....     .++++||+++ ++|.+++.
T Consensus        49 -----------------~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~  110 (308)
T 3g33_A           49 -----------------GGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLD  110 (308)
T ss_dssp             -----------------TTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHH
T ss_pred             -----------------ccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHh
Confidence                             01111223456777777766   5999999999987654     5899999995 69999998


Q ss_pred             hcCC--CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        299 DKGN--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~~~~--l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ....  +++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+|+.+.
T Consensus       111 ~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  171 (308)
T 3g33_A          111 KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS  171 (308)
T ss_dssp             TCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTST
T ss_pred             hccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccC
Confidence            7544  9999999999999999999999999999999999999999999999999997654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.94  E-value=4.1e-26  Score=219.08  Aligned_cols=148  Identities=29%  Similarity=0.483  Sum_probs=131.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++...   ++.+|+|.+....                                      
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~vavK~~~~~~--------------------------------------  228 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDA--------------------------------------  228 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEESSCT--------------------------------------
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec---CCeEEEEEeCCch--------------------------------------
Confidence            45788999999999999999999864   5689999885431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-eEEEEEeccCCcchHHHHHhcCC--
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-YLYMLMESCLGGELWTILRDKGN--  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~--  302 (362)
                                             ..+.+.+|+.+|+.++||||+++++++.... .+|+||||+++++|.+++...+.  
T Consensus       229 -----------------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~  285 (450)
T 1k9a_A          229 -----------------------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV  285 (450)
T ss_dssp             -----------------------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTT
T ss_pred             -----------------------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCC
Confidence                                   2356889999999999999999999876554 79999999999999999987543  


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            7999999999999999999999999999999999999999999999999998653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.8e-26  Score=210.12  Aligned_cols=154  Identities=25%  Similarity=0.358  Sum_probs=129.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCC---CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDP---SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ...++|.+.+.||+|+||.||++......   +..+|+|.+....                                   
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-----------------------------------   85 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-----------------------------------   85 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-----------------------------------
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-----------------------------------
Confidence            35678999999999999999999865433   2358999875421                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-C
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-G  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~  301 (362)
                                             .......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++... .
T Consensus        86 -----------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  142 (333)
T 1mqb_A           86 -----------------------TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG  142 (333)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCC
Confidence                                   1223456889999999999999999999999999999999999999999999764 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       143 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          143 EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            69999999999999999999999999999999999999999999999999998764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=3.7e-26  Score=206.37  Aligned_cols=147  Identities=13%  Similarity=0.031  Sum_probs=127.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~----------------------------------------   68 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDT-ALDRQVALTFVDPQG----------------------------------------   68 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEET-TTTEEEEEEESCTTC----------------------------------------
T ss_pred             cCcEEEEEEEcccCCeEEEEEEec-CCCceEEEEEECccc----------------------------------------
Confidence            367999999999999999999864 457899999986541                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                      .........+.+|+.+++.++||||+++++++...+..|+||||++|++|.++++..  .....
T Consensus        69 ----------------~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~  130 (286)
T 3uqc_A           69 ----------------VLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVG  130 (286)
T ss_dssp             ----------------CSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC--CCHHH
T ss_pred             ----------------ccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC--CChHH
Confidence                            111234466889999999999999999999999999999999999999999999642  46667


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccc
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFA  353 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a  353 (362)
                      +..++.|++.||.|||++||+||||||+|||++.+|.+||+++|..
T Consensus       131 ~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~  176 (286)
T 3uqc_A          131 AIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATM  176 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecccc
Confidence            8889999999999999999999999999999999999999987754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=5e-26  Score=213.19  Aligned_cols=147  Identities=27%  Similarity=0.465  Sum_probs=122.9

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      ...+.||+|+||.||++... .+++.+|+|++....                                            
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~-~~g~~vavK~~~~~~--------------------------------------------  126 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEET-ATGLKLAAKIIKTRG--------------------------------------------  126 (373)
T ss_dssp             EEEEECC-----CEEEEEET-TTCCEEEEEEEECCS--------------------------------------------
T ss_pred             ecceEEecCcCEEEEEEEEc-CCCcEEEEEEEcccc--------------------------------------------
Confidence            33678999999999999855 457899999886431                                            


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHHHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRF  310 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~  310 (362)
                                     ......+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++... ..+++..+..
T Consensus       127 ---------------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~  191 (373)
T 2x4f_A          127 ---------------MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL  191 (373)
T ss_dssp             ---------------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHH
T ss_pred             ---------------cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHH
Confidence                           122356789999999999999999999999999999999999999999988654 4699999999


Q ss_pred             HHHHHHHHHHHHHHCCcEeecCCCCcEEe--cCCCcEEEEecccceecCC
Q psy14740        311 YTACVVEAFDYLHSRNIIYRDLKPENLLL--STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       311 ~~~ql~~al~~lH~~~iiHrDikp~NIl~--~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++.|++.||.|||++||+||||||+|||+  +.++.+||+|||+++.+..
T Consensus       192 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~  241 (373)
T 2x4f_A          192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP  241 (373)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred             HHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence            99999999999999999999999999999  4667899999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=5.6e-26  Score=212.33  Aligned_cols=159  Identities=25%  Similarity=0.387  Sum_probs=136.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.||+|++........                                    
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~------------------------------------  135 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLS------------------------------------  135 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEETTSSCCC------------------------------------
T ss_pred             hhhcccceEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccccC------------------------------------
Confidence            467999999999999999999864 4588999999865410000                                    


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                     ..........+.+|+.+++.+ +||||+++++++......|+||||+++++|.+++.....+++.
T Consensus       136 ---------------~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~  200 (365)
T 2y7j_A          136 ---------------PEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK  200 (365)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHH
Confidence                           001122345678999999999 8999999999999999999999999999999999887889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.+..
T Consensus       201 ~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            9999999999999999999999999999999999999999999999987654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=9.3e-26  Score=210.21  Aligned_cols=150  Identities=29%  Similarity=0.448  Sum_probs=130.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|++...                                        
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------------------   71 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNI----------------------------------------   71 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSC----------------------------------------
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEEC-CCCeEEEEEEeccc----------------------------------------
Confidence            3478999999999999999999965 45789999988532                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-----CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-----CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                          .........|+.+++.+.     ||||+++++++...+..|+|||++ +++|.+++....
T Consensus        72 --------------------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A           72 --------------------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             --------------------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcC
Confidence                                112344667889998885     999999999999999999999999 999999998754


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-------------------------CCcEEEEecccce
Q psy14740        302 --NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-------------------------SGYVKLVDFGFAK  354 (362)
Q Consensus       302 --~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-------------------------~~~~kl~DFG~a~  354 (362)
                        .+++..++.++.|++.||.|||++||+||||||+|||++.                         ++.+||+|||+|+
T Consensus       131 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~  210 (360)
T 3llt_A          131 YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT  210 (360)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCce
Confidence              4999999999999999999999999999999999999975                         7889999999998


Q ss_pred             ecCC
Q psy14740        355 KLIG  358 (362)
Q Consensus       355 ~~~~  358 (362)
                      ....
T Consensus       211 ~~~~  214 (360)
T 3llt_A          211 FKSD  214 (360)
T ss_dssp             ETTS
T ss_pred             ecCC
Confidence            6543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=1.8e-26  Score=211.64  Aligned_cols=153  Identities=23%  Similarity=0.390  Sum_probs=132.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||++.+.+    .+++.+|+|.+....                                   
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-----------------------------------   67 (322)
T 1p4o_A           23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-----------------------------------   67 (322)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-----------------------------------
T ss_pred             hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-----------------------------------
Confidence            45789999999999999999998653    346679999875421                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                             .......+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...  
T Consensus        68 -----------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  124 (322)
T 1p4o_A           68 -----------------------SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP  124 (322)
T ss_dssp             -----------------------CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHH
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhch
Confidence                                   1223345889999999999999999999999999999999999999999998753  


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                              ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       125 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~  189 (322)
T 1p4o_A          125 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  189 (322)
T ss_dssp             HHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGG
T ss_pred             hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccc
Confidence                    346899999999999999999999999999999999999999999999999997653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=2.3e-26  Score=214.76  Aligned_cols=162  Identities=19%  Similarity=0.318  Sum_probs=129.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++.+...    .++.+|+|.+.....                           .+.+-+ 
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~e~-   84 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---------------------------PLFTEL-   84 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH---------------------------HHHHHH-
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch---------------------------hHHHHH-
Confidence            345899999999999999999986543    357899998765310                           000000 


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc----ceEEEEEeccCCcchHHHHH
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~  298 (362)
                                          .............|...+..++||||+++++++...    .+.|+||||+ +++|.+++.
T Consensus        85 --------------------~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~  143 (364)
T 3op5_A           85 --------------------KFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE  143 (364)
T ss_dssp             --------------------HHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHH
T ss_pred             --------------------HHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHH
Confidence                                001111223456788888999999999999998764    5689999999 999999998


Q ss_pred             hc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec--CCCcEEEEecccceecC
Q psy14740        299 DK-GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS--TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       299 ~~-~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~--~~~~~kl~DFG~a~~~~  357 (362)
                      .. +.+++..+..++.|++.||.|||++||+||||||+|||++  .++.+||+|||+|+.+.
T Consensus       144 ~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~  205 (364)
T 3op5_A          144 ANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYC  205 (364)
T ss_dssp             HTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESS
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecc
Confidence            75 5799999999999999999999999999999999999999  88999999999998763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=1.3e-26  Score=214.71  Aligned_cols=154  Identities=29%  Similarity=0.484  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|++.+....                                      
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~--------------------------------------   65 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIR--------------------------------------   65 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHH--------------------------------------
T ss_pred             hhheeecceeeecCCeEEEEEEEC-CCCceEEEeehhhhhhc--------------------------------------
Confidence            467999999999999999999854 55788999998654210                                      


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-------
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-------  300 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------  300 (362)
                                      .........+.+|+.+++.++||||+++++++.+.+..|+||||+++++|.+++...       
T Consensus        66 ----------------~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  129 (345)
T 3hko_A           66 ----------------QINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK  129 (345)
T ss_dssp             ----------------C---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTE
T ss_pred             ----------------ccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccc
Confidence                            012234467889999999999999999999999999999999999999999988520       


Q ss_pred             ---------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC--cE
Q psy14740        301 ---------------------------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG--YV  345 (362)
Q Consensus       301 ---------------------------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~--~~  345 (362)
                                                       ..+++..++.++.|++.||.|||++||+||||||+||+++.++  .+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~  209 (345)
T 3hko_A          130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI  209 (345)
T ss_dssp             EEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCE
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceE
Confidence                                             1136778889999999999999999999999999999998766  89


Q ss_pred             EEEecccceec
Q psy14740        346 KLVDFGFAKKL  356 (362)
Q Consensus       346 kl~DFG~a~~~  356 (362)
                      ||+|||+++.+
T Consensus       210 kl~Dfg~a~~~  220 (345)
T 3hko_A          210 KLVDFGLSKEF  220 (345)
T ss_dssp             EECCCTTCEEG
T ss_pred             EEeeccccccc
Confidence            99999999865

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=4.6e-26  Score=207.30  Aligned_cols=150  Identities=29%  Similarity=0.488  Sum_probs=132.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   46 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSP----------------------------------------   46 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECC-----------------------------------------
T ss_pred             hccceeeeeccCCCCceEEEEEEC-CCCCEEEEEEEeccc----------------------------------------
Confidence            457999999999999999999865 457899999986431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ......+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.+++...+.+++..
T Consensus        47 -------------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  107 (304)
T 2jam_A           47 -------------------AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKD  107 (304)
T ss_dssp             ------------------------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHH
T ss_pred             -------------------ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHH
Confidence                               0112357789999999999999999999999999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.|++.||.|||++||+||||||+||++   +.++.++|+|||+++...
T Consensus       108 ~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            99999999999999999999999999999999   678899999999987543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=8.5e-26  Score=207.04  Aligned_cols=149  Identities=28%  Similarity=0.407  Sum_probs=129.3

Q ss_pred             cEEEEEecccceecEEEEEec---CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        151 LRVITTLGVGGFGRVELVQIA---GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      |++.+.||+|+||.||++...   ..+++.+|+|.+...                                         
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------------------------------------   71 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-----------------------------------------   71 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-----------------------------------------
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-----------------------------------------
Confidence            499999999999999987643   235778999998643                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                       ........+.+|+.+++.++||||+++++++.+  ...+|+||||+++++|.+++... .+++
T Consensus        72 -----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~  133 (318)
T 3lxp_A           72 -----------------AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGL  133 (318)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCH
T ss_pred             -----------------cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-CCCH
Confidence                             112234568899999999999999999999877  46799999999999999999764 5999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       134 ~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          134 AQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence            99999999999999999999999999999999999999999999999987654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=3.9e-26  Score=210.46  Aligned_cols=153  Identities=27%  Similarity=0.433  Sum_probs=132.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCC----CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDP----SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|.+.+.||+|+||.||.+.+.+..    ...+|+|.+...                                    
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------------------------------------   87 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST------------------------------------   87 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT------------------------------------
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc------------------------------------
Confidence            5678999999999999999999865432    246888887542                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                            ........+.+|+.+++.+ +||||+++++++...+.+|+||||+++++|.+++... 
T Consensus        88 ----------------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  145 (333)
T 2i1m_A           88 ----------------------AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS  145 (333)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHH
T ss_pred             ----------------------cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhc
Confidence                                  1122345688999999999 8999999999999999999999999999999998753 


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 -------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 -------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  215 (333)
T 2i1m_A          146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM  215 (333)
T ss_dssp             HHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGG
T ss_pred             ccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccc
Confidence                         357999999999999999999999999999999999999999999999999998653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=5.3e-26  Score=206.17  Aligned_cols=154  Identities=19%  Similarity=0.287  Sum_probs=128.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCC--CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPS--RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+|++.+.||+|+||.||++......+  ..+++|.+.+.                                      
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--------------------------------------   64 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--------------------------------------   64 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--------------------------------------
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--------------------------------------
Confidence            45679999999999999999998654332  35788876532                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeee-eeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                          ........+.+|+.+++.++||||++++++ +..++..|++|||+++++|.+++... ..
T Consensus        65 --------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~  124 (298)
T 3f66_A           65 --------------------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN  124 (298)
T ss_dssp             --------------------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCC
T ss_pred             --------------------CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccC
Confidence                                122334568899999999999999999998 45667899999999999999999763 45


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       125 ~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          125 PTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            89999999999999999999999999999999999999999999999999986643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=3.9e-26  Score=204.13  Aligned_cols=153  Identities=23%  Similarity=0.380  Sum_probs=124.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.   ++.+|+|.+.....                                     
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~-------------------------------------   43 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWI---GDEVAVKAARHDPD-------------------------------------   43 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEET---TEEEEEEEC------------------------------------------
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEc---CCeEEEEEEecCCc-------------------------------------
Confidence            45789999999999999999999854   66899998765310                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                        .......+.+.+|+.+++.++||||+++++++..++..|+||||+++++|.+++.. +.+++
T Consensus        44 ------------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~  104 (271)
T 3dtc_A           44 ------------------EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPP  104 (271)
T ss_dssp             -----------------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS-SCCCH
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc-CCCCH
Confidence                              01122345688999999999999999999999999999999999999999998864 57999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC---cEeecCCCCcEEecC--------CCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRN---IIYRDLKPENLLLST--------SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~---iiHrDikp~NIl~~~--------~~~~kl~DFG~a~~~~  357 (362)
                      ..++.++.|++.||.|||++|   |+||||||+||+++.        ++.++|+|||+++.+.
T Consensus       105 ~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~  167 (271)
T 3dtc_A          105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH  167 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence            999999999999999999999   999999999999986        6789999999997654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=8.2e-26  Score=206.74  Aligned_cols=150  Identities=23%  Similarity=0.363  Sum_probs=129.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++... .+++.+|+|.+...                                        
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------------------   65 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGL-HDGHFYALKRILCH----------------------------------------   65 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEES----------------------------------------
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEec-CCCcEEEEEEEecC----------------------------------------
Confidence            4578999999999999999999864 45789999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee----ccceEEEEEeccCCcchHHHHHh---
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK----DKKYLYMLMESCLGGELWTILRD---  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~---  299 (362)
                                         .......+.+|+.+++.++||||+++++++.    .....|+||||+++++|.+++..   
T Consensus        66 -------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  126 (317)
T 2buj_A           66 -------------------EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD  126 (317)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHT
T ss_pred             -------------------CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHh
Confidence                               1223456789999999999999999999986    34579999999999999999875   


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        300 -KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       300 -~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                       ...+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus       127 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          127 KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence             356999999999999999999999999999999999999999999999999988764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.93  E-value=8.7e-26  Score=204.02  Aligned_cols=151  Identities=24%  Similarity=0.363  Sum_probs=131.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ...|++...||+|+||.||++.+. .++..+|+|.+....                                        
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~va~k~~~~~~----------------------------------------   63 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRK----------------------------------------   63 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             ceeEEeeeeccCCCCeEEEEeEec-CCceEEEEEEecchh----------------------------------------
Confidence            345889999999999999999855 557889999876431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                       ........+.+|+.+++.++||||+++++++..    ...+|+||||+++++|.+++...+.+
T Consensus        64 -----------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  126 (290)
T 1t4h_A           64 -----------------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM  126 (290)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             -----------------hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCC
Confidence                             122334668899999999999999999998765    46799999999999999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEec-CCCcEEEEecccceec
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLS-TSGYVKLVDFGFAKKL  356 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~  356 (362)
                      ++..++.++.|++.||.|||+++  |+||||||+||+++ .++.+||+|||++...
T Consensus       127 ~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          127 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            99999999999999999999999  99999999999997 7899999999999644

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=4.9e-26  Score=202.92  Aligned_cols=148  Identities=26%  Similarity=0.373  Sum_probs=132.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||.+.+.  +++.+|+|.+....                                       
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vaiK~~~~~~---------------------------------------   44 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGA---------------------------------------   44 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTT---------------------------------------
T ss_pred             chhheeeeeEecCCCceeEEEEEec--CCCeEEEEEccccC---------------------------------------
Confidence            3578999999999999999999865  35679999886531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                           ...+.+.+|+.+++.++||||+++++++..++..|++|||+++++|.+++... ..+++
T Consensus        45 ---------------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  103 (267)
T 3t9t_A           45 ---------------------MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA  103 (267)
T ss_dssp             ---------------------BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCH
T ss_pred             ---------------------CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCH
Confidence                                 01245788999999999999999999999999999999999999999999865 45899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++..
T Consensus       104 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccc
Confidence            999999999999999999999999999999999999999999999999765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.93  E-value=8.7e-26  Score=203.06  Aligned_cols=147  Identities=27%  Similarity=0.444  Sum_probs=129.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.||+|+||.||++.+. .+++.+|+|.+...                                         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~-----------------------------------------   47 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYN-----------------------------------------   47 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEET-TTCCEEEEEEEECC-----------------------------------------
T ss_pred             ccccceeeeeccCCceEEEEEEEc-CCCeEEEEEEeccc-----------------------------------------
Confidence            367999999999999999999865 45789999987542                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----------------cceEEEEEeccCCc
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----------------KKYLYMLMESCLGG  291 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~  291 (362)
                                            ...+.+|+.+++.++||||+++++++..                ...+|+||||++++
T Consensus        48 ----------------------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  105 (284)
T 2a19_B           48 ----------------------NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG  105 (284)
T ss_dssp             ----------------------SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSC
T ss_pred             ----------------------cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCC
Confidence                                  1246789999999999999999998754                45689999999999


Q ss_pred             chHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        292 ELWTILRDK--GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       292 ~L~~~l~~~--~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       106 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  174 (284)
T 2a19_B          106 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN  174 (284)
T ss_dssp             BHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSC
T ss_pred             CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccc
Confidence            999999754  5699999999999999999999999999999999999999999999999999987654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=5.8e-26  Score=206.03  Aligned_cols=145  Identities=19%  Similarity=0.288  Sum_probs=124.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+   +++.+|+|.+...                                        
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~----------------------------------------   42 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSR----------------------------------------   42 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGG----------------------------------------
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEeccc----------------------------------------
Confidence            467899999999999999999985   3678999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhh--cCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE--ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                            ....+..|.+++..  ++||||+++++++..    ...+|+||||+++++|.++++. 
T Consensus        43 ----------------------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-   99 (301)
T 3q4u_A           43 ----------------------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-   99 (301)
T ss_dssp             ----------------------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-
T ss_pred             ----------------------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-
Confidence                                  12334566777666  799999999998543    4569999999999999999965 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH--------HCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLH--------SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH--------~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..+..++.|++.||.|||        +++|+||||||+|||++.++.+||+|||+|+...
T Consensus       100 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~  164 (301)
T 3q4u_A          100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS  164 (301)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecc
Confidence            57999999999999999999999        9999999999999999999999999999997653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.93  E-value=5.4e-26  Score=214.24  Aligned_cols=150  Identities=27%  Similarity=0.461  Sum_probs=130.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. . ++.+|+|.+....                                       
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~-~-~~~vaiK~~~~~~---------------------------------------   92 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNE-K-KQIYAIKYVNLEE---------------------------------------   92 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT-T-CCEEEEEEEECTT---------------------------------------
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcC-C-CCEEEEEEEeccc---------------------------------------
Confidence            3456999999999999999999854 3 7889999886531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        ........+.+|+.+++.++  ||||+++++++...+.+|+||| +.+++|.+++.....++
T Consensus        93 ------------------~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~  153 (390)
T 2zmd_A           93 ------------------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID  153 (390)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCC
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCC
Confidence                              11233466889999999996  5999999999999999999999 55899999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||+++.+.
T Consensus       154 ~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          154 PWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            999999999999999999999999999999999995 6899999999998764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.93  E-value=5.8e-26  Score=205.93  Aligned_cols=151  Identities=25%  Similarity=0.405  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   40 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDT----------------------------------------   40 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC--------------------------------------------
T ss_pred             cchhhhhhhhccCCCeeEEEEEEc-CCCceEEEEEeecCc----------------------------------------
Confidence            678999999999999999999865 457899999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~  305 (362)
                                       ........+.+|+.+++.++||||+++++++..++..|+||||++ ++|.+++...  ..+++
T Consensus        41 -----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~  102 (299)
T 2r3i_A           41 -----------------ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPL  102 (299)
T ss_dssp             ---------------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCH
T ss_pred             -----------------cchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCH
Confidence                             011223557889999999999999999999999999999999995 7999998765  46899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       103 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A          103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  154 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence            9999999999999999999999999999999999999999999999987653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=1.3e-25  Score=204.15  Aligned_cols=151  Identities=27%  Similarity=0.453  Sum_probs=134.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .+.|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   59 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEE----------------------------------------   59 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEETTT----------------------------------------
T ss_pred             HHHHHHhhhhcccCCeEEEEEEEC-CCCcEEEEEEecccc----------------------------------------
Confidence            466999999999999999999855 457899999886431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                        .......+.+|+.+++.++||||+++++++.....+|+||||+++++|.+++.. +++++..
T Consensus        60 ------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~  120 (303)
T 3a7i_A           60 ------------------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQ  120 (303)
T ss_dssp             ------------------CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHH
T ss_pred             ------------------cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHH
Confidence                              112345688999999999999999999999999999999999999999999875 5799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.+..
T Consensus       121 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            999999999999999999999999999999999999999999999987644

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=6e-26  Score=204.96  Aligned_cols=155  Identities=30%  Similarity=0.430  Sum_probs=126.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|++.+.||+|+||.||++.+...+++  .+|+|.+....                                     
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------------------------------------   58 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV-------------------------------------   58 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC------------------------------------------
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCc-------------------------------------
Confidence            457899999999999999999986544343  68999876531                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                         .........+.+|+.+++.++||||+++++++..+. .++|||++++++|.+++... ..+
T Consensus        59 -------------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~  118 (291)
T 1u46_A           59 -------------------LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHF  118 (291)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGS
T ss_pred             -------------------cCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCc
Confidence                               112234466889999999999999999999998765 88999999999999998764 569


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||+++.+..
T Consensus       119 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A          119 LLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            9999999999999999999999999999999999999999999999999987643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.5e-26  Score=212.09  Aligned_cols=155  Identities=26%  Similarity=0.419  Sum_probs=126.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|.+.....                                      
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--------------------------------------   48 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHR--------------------------------------   48 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECS-SCCSEEEEEEC-------------------------------------------
T ss_pred             HhcccEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEEecCCc--------------------------------------
Confidence            4678999999999999999999854 4588999999865311                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                      ..........+.+|+.+++.++||||+++++++.+.+..|+||||++ ++|.+++.... .+++
T Consensus        49 ----------------~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~  111 (346)
T 1ua2_A           49 ----------------SEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTP  111 (346)
T ss_dssp             -----------------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS-EEHHHHHTTCCSSCCS
T ss_pred             ----------------chhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC-CCHHHHHHhcCcCCCH
Confidence                            00111223457889999999999999999999999999999999995 58988887643 5899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       112 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A          112 SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            9999999999999999999999999999999999999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=7.2e-26  Score=208.42  Aligned_cols=156  Identities=22%  Similarity=0.339  Sum_probs=126.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.. +++.+++|+..+.-.                                     
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~iK~~~-------------------------------------   53 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELR-------------------------------------   53 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECC-TTCSCCEEEEEEEEC-------------------------------------
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcC-CCceEEEEEEEEeec-------------------------------------
Confidence            456889999999999999999998654 455665554332100                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                       ..........+.+|+.+++.++||||+++++++..+. .+++++++++++|.+++... ..++
T Consensus        54 -----------------~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~  115 (327)
T 3lzb_A           54 -----------------EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG  115 (327)
T ss_dssp             -----------------CCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCC
T ss_pred             -----------------cccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCC
Confidence                             0111223456889999999999999999999998765 78899999999999999764 4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       116 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A          116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            99999999999999999999999999999999999999999999999998664

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=3.5e-26  Score=219.81  Aligned_cols=149  Identities=27%  Similarity=0.416  Sum_probs=130.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||++.+..  +..+|+|.+....                                      
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~~~~~--------------------------------------  224 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGS--------------------------------------  224 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETT--TEEEEEEEECTTS--------------------------------------
T ss_pred             echHHeEEEEEcccCCceEEEEEEECC--ccEEEEEEecCCC--------------------------------------
Confidence            345789999999999999999998653  5679999886431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l  303 (362)
                                            ...+.+.+|+.+|+.++||||+++++++. .+.+|+||||+++|+|.+++...  ..+
T Consensus       225 ----------------------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~  281 (454)
T 1qcf_A          225 ----------------------MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQ  281 (454)
T ss_dssp             ----------------------BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTC
T ss_pred             ----------------------ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCC
Confidence                                  12356889999999999999999999986 56789999999999999999754  368


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +...+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++.+.
T Consensus       282 ~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          282 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            999999999999999999999999999999999999999999999999998654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.93  E-value=5.1e-26  Score=207.80  Aligned_cols=155  Identities=24%  Similarity=0.292  Sum_probs=125.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|.+.+.||+|+||.||++....+  +++.+|+|.+....                                     
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------------------------------------   74 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-------------------------------------   74 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-------------------------------------
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-------------------------------------
Confidence            457899999999999999999986543  34579999875431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHHh
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~  299 (362)
                                          ........+.+|+.+++.++||||+++++++...+     ..|++|||+++++|.+++..
T Consensus        75 --------------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~  134 (313)
T 3brb_A           75 --------------------SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY  134 (313)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHH
T ss_pred             --------------------cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHH
Confidence                                11223456889999999999999999999987654     35999999999999999843


Q ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 ------KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ------~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                            ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+..
T Consensus       135 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          135 SRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS  199 (313)
T ss_dssp             TTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----
T ss_pred             hhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccc
Confidence                  34599999999999999999999999999999999999999999999999999986643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=4.6e-26  Score=204.51  Aligned_cols=153  Identities=28%  Similarity=0.494  Sum_probs=131.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+++|.+....                                       
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   43 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGS---------------------------------------   43 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEECTT---------------------------------------
T ss_pred             chhheeeehhccCCCCcEEEEEEEC-CCCcEEEEEEEEccc---------------------------------------
Confidence            5689999999999999999999865 457899999886431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeee--eccceEEEEEeccCCcchHHHHHhc----
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF--KDKKYLYMLMESCLGGELWTILRDK----  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~----  300 (362)
                                        ......+.+.+|+.+++.++||||+++++++  .....+|+||||+++++|.+++...    
T Consensus        44 ------------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  105 (279)
T 2w5a_A           44 ------------------MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER  105 (279)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTT
T ss_pred             ------------------CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccC
Confidence                              1122345688999999999999999999977  4467899999999999999998753    


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC-----cEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~-----iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..++.++.|++.||.|||+++     |+||||||+||+++.++.+||+|||+++.+.
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~  167 (279)
T 2w5a_A          106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  167 (279)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeec
Confidence            24999999999999999999999999     9999999999999999999999999997654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=3.9e-26  Score=208.59  Aligned_cols=154  Identities=31%  Similarity=0.441  Sum_probs=132.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                      ...++|++.+.||+|+||.||++.+.+    .+++.+|+|.+.+..                                  
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------------------------   69 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------------------------------   69 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----------------------------------
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC----------------------------------
Confidence            356789999999999999999998532    456789999886431                                  


Q ss_pred             cchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeecc-ceEEEEEeccCCcchHHHHHh
Q psy14740        222 SSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDK-KYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              .......+.+|+.++..+ +||||+++++++... ..+|++|||+++++|.+++..
T Consensus        70 ------------------------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  125 (316)
T 2xir_A           70 ------------------------THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS  125 (316)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHT
T ss_pred             ------------------------CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHh
Confidence                                    122335688999999999 799999999998765 459999999999999999986


Q ss_pred             cCC----------------CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KGN----------------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~~----------------l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...                +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  199 (316)
T 2xir_A          126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY  199 (316)
T ss_dssp             CTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred             cccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccc
Confidence            543                7899999999999999999999999999999999999999999999999998664

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.93  E-value=2.5e-26  Score=210.79  Aligned_cols=150  Identities=22%  Similarity=0.271  Sum_probs=132.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++...||+|+||.||++.+.  +++.+|+|.+...                                        
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~----------------------------------------   74 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPE----------------------------------------   74 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSC----------------------------------------
T ss_pred             HHhccCccceeecCCCeeEEEEEEC--CCCEEEEEEeccc----------------------------------------
Confidence            4578999999999999999999843  4788999976542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC----C
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG----N  302 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~  302 (362)
                                         .......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++....    .
T Consensus        75 -------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  135 (321)
T 2qkw_B           75 -------------------SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS  135 (321)
T ss_dssp             -------------------CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCC
T ss_pred             -------------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccc
Confidence                               11234568899999999999999999999999999999999999999999886543    4


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             cCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            8999999999999999999999999999999999999999999999999998653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.93  E-value=5.2e-26  Score=204.29  Aligned_cols=149  Identities=24%  Similarity=0.409  Sum_probs=130.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++...  .+..+|+|.+....                                       
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~---------------------------------------   49 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGS---------------------------------------   49 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTS---------------------------------------
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc--CCcEEEEEEecCCc---------------------------------------
Confidence            4578999999999999999999854  35679999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~  304 (362)
                                           .....+.+|+.+++.++||||+++++++.. +..|+||||+++++|.+++....  .++
T Consensus        50 ---------------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~  107 (279)
T 1qpc_A           50 ---------------------MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLT  107 (279)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCC
T ss_pred             ---------------------ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCC
Confidence                                 113457899999999999999999999864 45899999999999999997543  699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++....
T Consensus       108 ~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A          108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            999999999999999999999999999999999999999999999999987654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=204.52  Aligned_cols=151  Identities=28%  Similarity=0.451  Sum_probs=128.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|.+.+.||+|+||.||.+.+. .+++.+|+|.+....                                      
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~--------------------------------------   66 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK-ETGQIVAIKQVPVES--------------------------------------   66 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET-TTCCEEEEEEEETTS--------------------------------------
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC-CCCCEEEEEecCchH--------------------------------------
Confidence            34678999999999999999999855 458899999875421                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                             ....+.+|+.+++.++||||+++++++...+.+|+||||+++++|.+++.. ...++
T Consensus        67 -----------------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  123 (314)
T 3com_A           67 -----------------------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT  123 (314)
T ss_dssp             -----------------------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCC
T ss_pred             -----------------------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCC
Confidence                                   124578899999999999999999999999999999999999999999874 45799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.+..
T Consensus       124 ~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          124 EDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            999999999999999999999999999999999999999999999999987643

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.93  E-value=1.1e-25  Score=202.43  Aligned_cols=154  Identities=28%  Similarity=0.364  Sum_probs=130.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ...++|.+.+.||+|+||.||++.+....  +..+|+|.+.+..                                    
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~------------------------------------   52 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC------------------------------------   52 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS------------------------------------
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc------------------------------------
Confidence            35678999999999999999999865433  3458999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-C
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-N  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~  302 (362)
                                            .......+.+|+.+++.++||||+++++++..+ ..|+||||+++++|.+++...+ .
T Consensus        53 ----------------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~  109 (281)
T 3cc6_A           53 ----------------------TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNS  109 (281)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTT
T ss_pred             ----------------------CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhcccc
Confidence                                  122346688999999999999999999998754 4689999999999999997654 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus       110 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A          110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            99999999999999999999999999999999999999999999999999986543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=9.4e-26  Score=212.13  Aligned_cols=147  Identities=33%  Similarity=0.438  Sum_probs=123.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.||+|+||.||++.+. .+++.||+|.+....                                       
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~---------------------------------------   44 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDP---------------------------------------   44 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEET-TTCCEEEEEEEECCT---------------------------------------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEecCc---------------------------------------
Confidence            3578999999999999999999855 468899999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee------------------------------
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK------------------------------  276 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------------------------------  276 (362)
                                              ....+|+.+++.++||||+++++++.                              
T Consensus        45 ------------------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (383)
T 3eb0_A           45 ------------------------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHH  100 (383)
T ss_dssp             ------------------------TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------------------
T ss_pred             ------------------------chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccccccccccc
Confidence                                    11236999999999999999999983                              


Q ss_pred             --------ccceEEEEEeccCCcchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCC
Q psy14740        277 --------DKKYLYMLMESCLGGELWTILR----DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSG  343 (362)
Q Consensus       277 --------~~~~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~  343 (362)
                              ...++++||||++ ++|.+.+.    ....+++..++.++.|++.||.|||++||+||||||+||+++ .++
T Consensus       101 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~  179 (383)
T 3eb0_A          101 KSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN  179 (383)
T ss_dssp             ---------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTT
T ss_pred             ccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCC
Confidence                    3445899999996 67776665    346799999999999999999999999999999999999998 688


Q ss_pred             cEEEEecccceecCC
Q psy14740        344 YVKLVDFGFAKKLIG  358 (362)
Q Consensus       344 ~~kl~DFG~a~~~~~  358 (362)
                      .+||+|||+|+.+..
T Consensus       180 ~~kl~Dfg~a~~~~~  194 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIP  194 (383)
T ss_dssp             EEEECCCTTCEECCT
T ss_pred             cEEEEECCCCcccCC
Confidence            999999999987643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=1.4e-25  Score=202.43  Aligned_cols=153  Identities=27%  Similarity=0.497  Sum_probs=134.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~valK~~~~~~----------------------------------------   59 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKAS----------------------------------------   59 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGG----------------------------------------
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEc-CCCcEEEEEEecccc----------------------------------------
Confidence            568999999999999999999865 457889999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+.+++.++||||+++++++...+..|++||++++++|.+++...+.+++..
T Consensus        60 -----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  122 (287)
T 2wei_A           60 -----------------AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD  122 (287)
T ss_dssp             -----------------BSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             -----------------cchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHH
Confidence                             112234568899999999999999999999999999999999999999999998878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC---CcEEEEecccceecCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS---GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~---~~~kl~DFG~a~~~~~  358 (362)
                      +..++.|++.||.|||++|++|+||||+||+++.+   +.+||+|||+++....
T Consensus       123 ~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A          123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence            99999999999999999999999999999999754   4699999999976543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=9e-26  Score=204.98  Aligned_cols=148  Identities=26%  Similarity=0.483  Sum_probs=129.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~---------------------------------------   56 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKS---------------------------------------   56 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEET-TTCCEEEEEEEC------------------------------------------
T ss_pred             CccceeecceeccCCCeEEEEEEEc-CCCcEEEEEEecCCC---------------------------------------
Confidence            3578999999999999999999965 457889999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~  305 (362)
                                          ......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++.. ...+++
T Consensus        57 --------------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~  116 (302)
T 2j7t_A           57 --------------------EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE  116 (302)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCH
T ss_pred             --------------------HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCH
Confidence                                12235678899999999999999999999999999999999999999998875 456999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.
T Consensus       117 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A          117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA  165 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence            9999999999999999999999999999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=8.4e-26  Score=204.69  Aligned_cols=152  Identities=22%  Similarity=0.289  Sum_probs=128.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...|.+.+.||+|+||.||++.+...  .+..+|+|.+...                                       
T Consensus        20 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---------------------------------------   60 (298)
T 3pls_A           20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI---------------------------------------   60 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC---------------------------------------
T ss_pred             ceEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc---------------------------------------
Confidence            34567779999999999999986543  2236888887542                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceE-EEEEeccCCcchHHHHHh-cCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL-YMLMESCLGGELWTILRD-KGNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~-~~~l  303 (362)
                                         ........+.+|+.+++.++||||+++++++...+.. +++|||+.+++|.+++.. ...+
T Consensus        61 -------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~  121 (298)
T 3pls_A           61 -------------------TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP  121 (298)
T ss_dssp             -------------------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCC
T ss_pred             -------------------ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCC
Confidence                               1123346688999999999999999999999766554 999999999999999986 3468


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       122 ~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          122 TVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            999999999999999999999999999999999999999999999999997553

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.93  E-value=1.6e-25  Score=206.02  Aligned_cols=146  Identities=23%  Similarity=0.391  Sum_probs=129.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|++...                                        
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------------------   72 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKPV----------------------------------------   72 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSC----------------------------------------
T ss_pred             CCCceEEEEEecccCCeEEEEEEEC-CCCcEEEEEEeccc----------------------------------------
Confidence            4578999999999999999999855 45789999987532                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                            ....+.+|+.+++.++ ||||+++++++.+  ....++||||+++++|.+++..   +
T Consensus        73 ----------------------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~  127 (330)
T 3nsz_A           73 ----------------------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---L  127 (330)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---C
T ss_pred             ----------------------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---C
Confidence                                  1245788999999996 9999999999987  6779999999999999998853   8


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~  358 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+|+.+..
T Consensus       128 ~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999999999999999999999999999999776 899999999987643

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.3e-25  Score=206.43  Aligned_cols=154  Identities=27%  Similarity=0.410  Sum_probs=132.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEe---cCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQI---AGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ....+|++.+.||+|+||.||++..   ...+++.+|+|.+...                                    
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~------------------------------------   81 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------------------------------------   81 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC------------------------------------
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC------------------------------------
Confidence            3457899999999999999999985   2345788999987542                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc--eEEEEEeccCCcchHHHHHhc
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK--YLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                             .......+.+|+.+++.++||||+++++++...+  .+++||||+++++|.+++...
T Consensus        82 -----------------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  138 (326)
T 2w1i_A           82 -----------------------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH  138 (326)
T ss_dssp             -----------------------CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHS
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc
Confidence                                   1223456889999999999999999999876543  789999999999999999875


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        301 -GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 -~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                       ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus       139 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          139 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence             3599999999999999999999999999999999999999999999999999987643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=9.9e-26  Score=204.36  Aligned_cols=149  Identities=33%  Similarity=0.570  Sum_probs=130.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||.+.+. .+++.+|+|.+...                                         
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~-----------------------------------------   42 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHT-----------------------------------------   42 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEEE-----------------------------------------
T ss_pred             cccchhhheeccCCcEEEEEEEEc-CCCeEEEEEEEecc-----------------------------------------
Confidence            357999999999999999999855 45789999987432                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-------------cceEEEEEeccCCcchH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-------------KKYLYMLMESCLGGELW  294 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~  294 (362)
                                         ......+.+|+.+++.++||||+++++++.+             ....|+||||+++++|.
T Consensus        43 -------------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  103 (303)
T 1zy4_A           43 -------------------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY  103 (303)
T ss_dssp             -------------------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHH
T ss_pred             -------------------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHH
Confidence                               1223567899999999999999999998754             46799999999999999


Q ss_pred             HHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        295 TILRDKG-NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       295 ~~l~~~~-~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++.... .+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       104 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A          104 DLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             HHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             HhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            9998643 57889999999999999999999999999999999999999999999999998654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.93  E-value=1.2e-25  Score=210.59  Aligned_cols=150  Identities=25%  Similarity=0.363  Sum_probs=126.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   62 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPF---------------------------------------   62 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECTT---------------------------------------
T ss_pred             hhhheeEeeeeEecCCEEEEEEEEC-CCCceEEEEEecccc---------------------------------------
Confidence            4678999999999999999999854 457889999886421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------eEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ........+.+|+.+++.++||||+++++++...+      .+|+||||++ ++|.+.+.  
T Consensus        63 ------------------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--  121 (371)
T 2xrw_A           63 ------------------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ--  121 (371)
T ss_dssp             ------------------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH--
T ss_pred             ------------------CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHh--
Confidence                              11233456789999999999999999999987654      7899999995 68888885  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       122 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          122 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            459999999999999999999999999999999999999999999999999998654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=3.8e-26  Score=211.67  Aligned_cols=166  Identities=23%  Similarity=0.417  Sum_probs=136.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+   +++.+|+|.+..............                             
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~-----------------------------   76 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKS-----------------------------   76 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCC-----------------------------
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccc-----------------------------
Confidence            468999999999999999999996   588999999876432111000000                             


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHH------HHh-
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI------LRD-  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~-  299 (362)
                                   .............+.+|+.+++.++||||+++++++.+.+.+|+||||+++++|.++      +.. 
T Consensus        77 -------------~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~  143 (348)
T 2pml_X           77 -------------NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN  143 (348)
T ss_dssp             -------------SSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS
T ss_pred             -------------cchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc
Confidence                         000111122336789999999999999999999999999999999999999999998      655 


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 -KGNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 -~~~l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                       ...+++..++.++.|++.||.|||+ +||+||||||+||+++.++.++|+|||+++.+.
T Consensus       144 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  203 (348)
T 2pml_X          144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV  203 (348)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECB
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccc
Confidence             4579999999999999999999999 999999999999999999999999999998754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.6e-25  Score=202.03  Aligned_cols=152  Identities=28%  Similarity=0.431  Sum_probs=130.1

Q ss_pred             cccCcEEEE-EecccceecEEEEEec-CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVIT-TLGVGGFGRVELVQIA-GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~-~lg~G~~g~v~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|.+.+ .||+|+||.||++.+. ...+..+|+|.+...                                      
T Consensus         7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--------------------------------------   48 (287)
T 1u59_A            7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--------------------------------------   48 (287)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--------------------------------------
T ss_pred             cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--------------------------------------
Confidence            346788887 9999999999999753 335678999988643                                      


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCC
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF  303 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l  303 (362)
                                          ......+.+.+|+.+++.++||||+++++++ ..+..|+|||++++++|.+++... ..+
T Consensus        49 --------------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~  107 (287)
T 1u59_A           49 --------------------TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI  107 (287)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTS
T ss_pred             --------------------cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccC
Confidence                                1123345688999999999999999999999 455699999999999999998654 459


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       108 ~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A          108 PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            999999999999999999999999999999999999999999999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=4.6e-26  Score=218.88  Aligned_cols=149  Identities=23%  Similarity=0.391  Sum_probs=128.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+.+  +..+|+|.+....                                       
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~---------------------------------------  220 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT---------------------------------------  220 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTS---------------------------------------
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC--CceEEEEEeccCC---------------------------------------
Confidence            45789999999999999999998654  4569999886431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           ...+.+.+|+.+|+.++||||+++++++.. +..|+||||+++++|.+++...  ..++
T Consensus       221 ---------------------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~  278 (452)
T 1fmk_A          221 ---------------------MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR  278 (452)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCC
T ss_pred             ---------------------CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCC
Confidence                                 112457899999999999999999999876 6689999999999999999753  4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       279 ~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            999999999999999999999999999999999999999999999999987644

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.93  E-value=5.2e-26  Score=212.64  Aligned_cols=150  Identities=21%  Similarity=0.406  Sum_probs=116.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~----------------------------------------   66 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPF----------------------------------------   66 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEET-TTTEEEEEEECSSTT----------------------------------------
T ss_pred             CCceEEeeEEeecCCeEEEEEEEC-CCCCEEEEEEeCccc----------------------------------------
Confidence            478999999999999999999855 568899999885421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ........+.+|+.+++.++||||+++++++...      ..+|++||++ +++|.+++.. .
T Consensus        67 -----------------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~  127 (367)
T 2fst_X           67 -----------------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-Q  127 (367)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------C
T ss_pred             -----------------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-C
Confidence                             1122345678999999999999999999998653      5689999999 8999998876 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       128 ~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            79999999999999999999999999999999999999999999999999998653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=4.3e-26  Score=206.99  Aligned_cols=151  Identities=26%  Similarity=0.441  Sum_probs=119.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||.+.+. .+++.+|+|.+....                                       
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   52 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINLEK---------------------------------------   52 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC------------------------------------------
T ss_pred             chhhhhhhheeccccceEEEEEEEC-CCCcEEEEEEEEhhh---------------------------------------
Confidence            4688999999999999999999854 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-------
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-------  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-------  299 (362)
                                         .......+.+|+.+++.++||||+++++++...+..|+||||+++++|.+++..       
T Consensus        53 -------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  113 (303)
T 2vwi_A           53 -------------------CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH  113 (303)
T ss_dssp             --------------------------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTT
T ss_pred             -------------------cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhcccc
Confidence                               011234577899999999999999999999999999999999999999999874       


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        300 -KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       300 -~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                       ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+
T Consensus       114 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A          114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             TTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence             345899999999999999999999999999999999999999999999999998754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.93  E-value=6.9e-26  Score=208.35  Aligned_cols=158  Identities=23%  Similarity=0.357  Sum_probs=130.8

Q ss_pred             hhhhhccccCcEEEEEecccceecEEEEEec----CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhh
Q psy14740        141 EEFRSLRLSDLRVITTLGVGGFGRVELVQIA----GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQET  216 (362)
Q Consensus       141 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~  216 (362)
                      ..+.....++|++.+.||+|+||.||++...    ..+++.+|+|.+...                              
T Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------------------------------   71 (327)
T 2yfx_A           22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV------------------------------   71 (327)
T ss_dssp             GGSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS------------------------------
T ss_pred             hhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc------------------------------
Confidence            3445556789999999999999999999843    235678999987532                              


Q ss_pred             HHhhccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHH
Q psy14740        217 FNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTI  296 (362)
Q Consensus       217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  296 (362)
                                                  ........+.+|+.+++.++||||+++++++...+..|+||||+++++|.++
T Consensus        72 ----------------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  123 (327)
T 2yfx_A           72 ----------------------------CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF  123 (327)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHH
T ss_pred             ----------------------------cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHH
Confidence                                        1122345678899999999999999999999999999999999999999999


Q ss_pred             HHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceec
Q psy14740        297 LRDKG-------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL  356 (362)
Q Consensus       297 l~~~~-------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~  356 (362)
                      +....       .+++..+..++.|++.||.|||++||+||||||+||+++.   +..++|+|||+++.+
T Consensus       124 l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~  193 (327)
T 2yfx_A          124 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  193 (327)
T ss_dssp             HHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             HHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence            98653       3889999999999999999999999999999999999984   446999999998754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.93  E-value=2.4e-25  Score=201.68  Aligned_cols=149  Identities=20%  Similarity=0.287  Sum_probs=131.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   47 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRS---------------------------------------   47 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCT---------------------------------------
T ss_pred             cccceEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeccCC---------------------------------------
Confidence            4578999999999999999999854 458899999875321                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                            ....+.+|+.+++.+ +|||++++++++......|+||||+ +++|.+++...+ +++
T Consensus        48 ----------------------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~  104 (298)
T 1csn_A           48 ----------------------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFS  104 (298)
T ss_dssp             ----------------------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCC
T ss_pred             ----------------------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCC
Confidence                                  123477899999999 8999999999999999999999999 999999998654 599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc-----EEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-----VKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~-----~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.     +||+|||+++.+..
T Consensus       105 ~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A          105 VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            9999999999999999999999999999999999987765     99999999987654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.93  E-value=1e-25  Score=203.37  Aligned_cols=153  Identities=26%  Similarity=0.450  Sum_probs=122.1

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                      
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--------------------------------------   44 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATV--------------------------------------   44 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEC-----------------------------------------
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEec-CCCeEEEEEEeeccc--------------------------------------
Confidence            35688999999999999999999865 457899999885431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh----cC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD----KG  301 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~  301 (362)
                                         ........+..+...++.++||||+++++++.+++..|+||||++ ++|.+++..    ..
T Consensus        45 -------------------~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~  104 (290)
T 3fme_A           45 -------------------NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQ  104 (290)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTC
T ss_pred             -------------------CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCC
Confidence                               011122334455556788899999999999999999999999995 688777653    45


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..++.++.|++.||.|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A          105 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            799999999999999999999998 99999999999999999999999999997653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=4.2e-26  Score=209.55  Aligned_cols=151  Identities=23%  Similarity=0.309  Sum_probs=131.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++...  +++.+|+|.+.....                                      
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~--------------------------------------   67 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERT--------------------------------------   67 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC-----------------------------------------
T ss_pred             HhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccC--------------------------------------
Confidence            5678999999999999999999743  478899999865310                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC----C
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG----N  302 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~  302 (362)
                                          ......+.+|+.+++.++||||+++++++..++..++||||+++++|.+++....    .
T Consensus        68 --------------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  127 (326)
T 3uim_A           68 --------------------QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP  127 (326)
T ss_dssp             ----------------------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCC
T ss_pred             --------------------chHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCC
Confidence                                1112357899999999999999999999999999999999999999999998643    3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSR---NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~---~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++   ||+||||||+||+++.++.+||+|||+++.+.
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence            89999999999999999999999   99999999999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=4.6e-26  Score=213.39  Aligned_cols=152  Identities=19%  Similarity=0.284  Sum_probs=122.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..|.+.+.||+|+||.||++......  ...+|+|.+...                                        
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----------------------------------------  128 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----------------------------------------  128 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC----------------------------------------
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC----------------------------------------
Confidence            45788999999999999999865433  245788876432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeee-eccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                        ........+.+|+.+++.++||||+++++++ ..++..|+||||+++++|.+++.... .++
T Consensus       129 ------------------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~  190 (373)
T 3c1x_A          129 ------------------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT  190 (373)
T ss_dssp             ------------------SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCB
T ss_pred             ------------------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCC
Confidence                              1123446688999999999999999999985 45568899999999999999997643 588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       191 ~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          191 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence            999999999999999999999999999999999999999999999999986543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.93  E-value=2e-25  Score=208.48  Aligned_cols=149  Identities=22%  Similarity=0.369  Sum_probs=129.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.||+|+||.||++.+. .+++.+|+|.+...                                         
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~-----------------------------------------   63 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPF-----------------------------------------   63 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCT-----------------------------------------
T ss_pred             cccEEEEEEeecCCCeEEEEEEEC-CCCeEEEEEEeccc-----------------------------------------
Confidence            358999999999999999999855 45788999988542                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                       ........+.+|+.+++.++||||+++++++...     ...|+|||++ +++|.+++.. +.
T Consensus        64 -----------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~-~~~L~~~l~~-~~  124 (364)
T 3qyz_A           64 -----------------EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKT-QH  124 (364)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC-SEEHHHHHHH-CC
T ss_pred             -----------------cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc-CcCHHHHHHh-CC
Confidence                             1122345678999999999999999999998654     4699999999 5699998876 56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       125 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            9999999999999999999999999999999999999999999999999998654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.93  E-value=6.1e-26  Score=203.77  Aligned_cols=148  Identities=29%  Similarity=0.477  Sum_probs=125.0

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.   ++.+|+|.+...                                       
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~---------------------------------------   55 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND---------------------------------------   55 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET---TEEEEEEECCCC---------------------------------------
T ss_pred             CChhhceEEeEEecCCCceEEEEEEc---CCEEEEEEecch---------------------------------------
Confidence            45789999999999999999999854   678999987532                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhcCC--
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKGN--  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~--  302 (362)
                                            ...+.+.+|+.+++.++||||+++++++.. .+.+|+||||+++++|.+++...+.  
T Consensus        56 ----------------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  113 (278)
T 1byg_A           56 ----------------------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV  113 (278)
T ss_dssp             ----------------------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHH
T ss_pred             ----------------------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccccc
Confidence                                  123457889999999999999999998654 4579999999999999999986543  


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            8999999999999999999999999999999999999999999999999997654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.93  E-value=3e-25  Score=200.13  Aligned_cols=159  Identities=25%  Similarity=0.354  Sum_probs=131.9

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      +....++|++.+.||+|+||.||++.+. .+++.+|+|.+.......                                 
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~---------------------------------   59 (287)
T 4f0f_A           14 PTLADNEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEG---------------------------------   59 (287)
T ss_dssp             CBCCSTTEEEEEECCCCSSSCEEEEEET-TTCCEEEEEECCCCTTTC---------------------------------
T ss_pred             hhhhhccceehhccccCCceeEEEEEEc-CCceEEEEEEeecccccc---------------------------------
Confidence            3456689999999999999999999865 457889999886542100                                 


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                         ........+.+.+|+.+++.++||||+++++++.+..  ++||||+++++|.+.+... ..
T Consensus        60 -------------------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~  118 (287)
T 4f0f_A           60 -------------------ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHP  118 (287)
T ss_dssp             -------------------CHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSC
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCC
Confidence                               0001112356889999999999999999999997766  6999999999998887654 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCc-----EEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGY-----VKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~-----~kl~DFG~a~~~~  357 (362)
                      +++..+..++.|++.||.|||++|  |+||||||+||+++.++.     +||+|||+++...
T Consensus       119 ~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~  180 (287)
T 4f0f_A          119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV  180 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccc
Confidence            999999999999999999999999  999999999999988776     9999999997543

>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*

Probab=99.93  E-value=6.7e-25  Score=208.09  Aligned_cols=220  Identities=20%  Similarity=0.311  Sum_probs=169.3

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|++| +++++..|+..+..+.|++|++||++||+++.||||++|.|+|+. ..+ +.+..+..+++|++|||+
T Consensus       146 ~L~~~~lF~~L-~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~-~~~-G~~~~v~~l~~G~~fGe~  222 (416)
T 3tnp_B          146 ACKDILLFKNL-DPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCD-GVGRCVGNYDNRGSFGEL  222 (416)
T ss_dssp             HHTTSHHHHTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEE-ECS-SCEEEEEEEESCCEECGG
T ss_pred             HHhCCHhHhcC-CHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEE-ecC-CCEEEEEEecCCCEEeeH
Confidence            47889999999 999999999999999999999999999999999999999999998 444 556889999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhhc---cccCcEEEEE------
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSL---RLSDLRVITT------  156 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------  156 (362)
                      +++.+.||++||+|.  ++|++|.|++++|..++..+|.....++..+.....+...+...   .+........      
T Consensus       223 all~~~pr~atv~A~--~d~~l~~i~r~~f~~ll~~~~~~~~~~~~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~  300 (416)
T 3tnp_B          223 ALMYNTPKAATITAT--SPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQ  300 (416)
T ss_dssp             GGTSCCCCSSEEEES--SSEEEEEEEHHHHHHHHHHHHHHHSSSSSSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCE
T ss_pred             HHhcCCCcccEEEEc--cCeEEEEEeehhhhhhhhcchhHHHHHHHHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCE
Confidence            999999999999999  56999999999999999999999877665554443333222111   1111111122      


Q ss_pred             -ecccce---------ecEEEEEecCCC------CCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehh
Q psy14740        157 -LGVGGF---------GRVELVQIAGDP------SRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQE  215 (362)
Q Consensus       157 -lg~G~~---------g~v~~~~~~~~~------~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~  215 (362)
                       +-+|.-         |.|...... ..      ++...+..+.++++||.     +.++.+++.|.++  +.|+.|+++
T Consensus       301 I~~eGd~~~~~yiI~sG~v~v~~~~-~~~~~~~~g~~~~l~~l~~G~~fGE~all~~~~r~~tv~A~~~--~~ll~I~~~  377 (416)
T 3tnp_B          301 IIAQGDLADSFFIVESGEVKITMKR-KGKSEVEENGAVEIARCFRGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQ  377 (416)
T ss_dssp             EECTTSCCCEEEEEEEEEEEEECC-------------CEEEEECTTCEESGGGGTCCSCCSSEEEEEEE--EEEEEEEHH
T ss_pred             EEeCCCcCCEEEEEEeCEEEEEEec-CCcccccCCceeEEEEeCCCCEecHHHHhCCCCceeEEEEcCC--eEEEEEEHH
Confidence             222222         444433321 22      55678889999999993     5788899999864  999999999


Q ss_pred             hHHhhccchHHhhhhccc
Q psy14740        216 TFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       216 ~f~~~~~~~~~~~~~~~~  233 (362)
                      .|.++++...++..+...
T Consensus       378 ~f~~ll~~~p~i~~~~~~  395 (416)
T 3tnp_B          378 AFERLLGPCMEIMKRNIA  395 (416)
T ss_dssp             HHHHHHCCHHHHHTCC--
T ss_pred             HHHHHhcchHHHHHHHHH
Confidence            999999999888765443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.93  E-value=1.5e-25  Score=223.47  Aligned_cols=145  Identities=26%  Similarity=0.398  Sum_probs=126.5

Q ss_pred             EEecccceecEEEEEec-CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        155 TTLGVGGFGRVELVQIA-GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      +.||+|+||.||++.+. ...++.+|+|++....                                              
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~----------------------------------------------  408 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA----------------------------------------------  408 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG----------------------------------------------
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc----------------------------------------------
Confidence            47999999999999653 3345789999886531                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                 ........+.+|+.+|+.++||||+++++++.. +.+++||||+++++|.+++...+.+++..+..++.
T Consensus       409 -----------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~  476 (635)
T 4fl3_A          409 -----------NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVH  476 (635)
T ss_dssp             -----------GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHH
T ss_pred             -----------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHH
Confidence                       112234668999999999999999999999865 45899999999999999998888899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      |++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       477 qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~  520 (635)
T 4fl3_A          477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  520 (635)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred             HHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence            99999999999999999999999999999999999999998664

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.93  E-value=1.4e-25  Score=200.29  Aligned_cols=151  Identities=11%  Similarity=0.149  Sum_probs=132.4

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.   ++.+|+|.+....                                      
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~avK~~~~~~--------------------------------------   45 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRD--------------------------------------   45 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEET---TEEEEEEEECCTT--------------------------------------
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEEC---CeeEEEEEecccc--------------------------------------
Confidence            46789999999999999999999864   6779999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc--ceEEEEEeccCCcchHHHHHhcC--
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK--KYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                         ........+.+|+.+++.++||||+++++++.+.  ..+++||||+++++|.+++....  
T Consensus        46 -------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  106 (271)
T 3kmu_A           46 -------------------WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF  106 (271)
T ss_dssp             -------------------CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSC
T ss_pred             -------------------cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccC
Confidence                               1122345688999999999999999999999877  78999999999999999998754  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .+++..+..++.|++.||.|||+++  ++||||||+||+++.++.++|+|||++...
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A          107 VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            4899999999999999999999999  999999999999999999999999887544

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=6.6e-26  Score=210.19  Aligned_cols=161  Identities=19%  Similarity=0.283  Sum_probs=126.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..++|.+.+.||+|+||.||++.+..  ..+..+|+|........                           +.+-.   
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---------------------------~~~e~---   84 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP---------------------------LFSEL---   84 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CH---------------------------HHHHH---
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc---------------------------hHHHH---
Confidence            45789999999999999999999754  24678899987653110                           00000   


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                        ..........+.+|+.+++.++||||+++++++..    ....|+||||+ +++|.+++...
T Consensus        85 ------------------~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  145 (345)
T 2v62_A           85 ------------------KFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN  145 (345)
T ss_dssp             ------------------HHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG
T ss_pred             ------------------HHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc
Confidence                              00111123457789999999999999999999877    78899999999 99999999877


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC--cEEEEecccceec
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG--YVKLVDFGFAKKL  356 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~--~~kl~DFG~a~~~  356 (362)
                      +.+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+.+
T Consensus       146 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~  203 (345)
T 2v62_A          146 GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRY  203 (345)
T ss_dssp             GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEES
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceec
Confidence            7899999999999999999999999999999999999999877  9999999999876

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=1e-25  Score=209.46  Aligned_cols=145  Identities=17%  Similarity=0.252  Sum_probs=124.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC-------CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD-------PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      .++|.+.+.||+|+||.||++.+...       .++.+|+|.+.+.                                  
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------------------------------   86 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------------------------------   86 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------------------------------
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------------------------------
Confidence            47899999999999999999997643       4788999987532                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceee---------------eeeeeec-cceEEEE
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVK---------------LYKTFKD-KKYLYML  284 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~---------------~~~~~~~-~~~~~lv  284 (362)
                                                    ..+.+|+.+++.++||||++               +++++.. ...+|+|
T Consensus        87 ------------------------------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv  136 (352)
T 2jii_A           87 ------------------------------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLV  136 (352)
T ss_dssp             ------------------------------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEE
T ss_pred             ------------------------------chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEE
Confidence                                          34778999999999999988               4555544 6789999


Q ss_pred             EeccCCcchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC--cEEEEecccceecC
Q psy14740        285 MESCLGGELWTILRDK--GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG--YVKLVDFGFAKKLI  357 (362)
Q Consensus       285 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~--~~kl~DFG~a~~~~  357 (362)
                      |||+ +++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.+.
T Consensus       137 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~  212 (352)
T 2jii_A          137 LPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYC  212 (352)
T ss_dssp             EECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSS
T ss_pred             ecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeecc
Confidence            9999 99999999875  6799999999999999999999999999999999999999988  89999999997653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.4e-25  Score=204.78  Aligned_cols=158  Identities=24%  Similarity=0.384  Sum_probs=126.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+........                                   
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~-----------------------------------   72 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRL-TDRLQVAIKVIPRNRVLGW-----------------------------------   72 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECT-TTCCEEEEEECCSTTTC-------------------------------------
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEc-cCCeEEEEEEEeccccccc-----------------------------------
Confidence            3568999999999999999999854 4578999999865422110                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc----CCcceeeeeeeeeccceEEEEEec-cCCcchHHHHHhcC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA----NCDFIVKLYKTFKDKKYLYMLMES-CLGGELWTILRDKG  301 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h~~i~~~~~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~  301 (362)
                                        ........+.+|+.++..+    +||||+++++++...+..+++||+ +.+++|.+++...+
T Consensus        73 ------------------~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~  134 (312)
T 2iwi_A           73 ------------------SPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG  134 (312)
T ss_dssp             ------------------------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC
T ss_pred             ------------------ccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC
Confidence                              0011234466788888888    899999999999999999999999 78999999999888


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..++.++.|++.||.|||++||+||||||+||+++ .++.++|+|||+++.+..
T Consensus       135 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~  192 (312)
T 2iwi_A          135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD  192 (312)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhccc
Confidence            899999999999999999999999999999999999999 789999999999987654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=3.4e-25  Score=204.28  Aligned_cols=148  Identities=26%  Similarity=0.399  Sum_probs=123.3

Q ss_pred             hccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        145 SLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       145 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ...+++|++.+.||+|+||.||++..   +++.+|+|++....                                     
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~-------------------------------------   48 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFAN-------------------------------------   48 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGG-------------------------------------
T ss_pred             CcChHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccc-------------------------------------
Confidence            45689999999999999999999975   36789999875431                                     


Q ss_pred             HHhhhhccchhhhhccccccccchhhhhhHHHHHH--HhhcCCcceeeeeeee-----eccceEEEEEeccCCcchHHHH
Q psy14740        225 DEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEI--MGEANCDFIVKLYKTF-----KDKKYLYMLMESCLGGELWTIL  297 (362)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l  297 (362)
                                               ...+..|.++  +..++||||+++++.+     .....+|+||||+++++|.+++
T Consensus        49 -------------------------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  103 (336)
T 3g2f_A           49 -------------------------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL  103 (336)
T ss_dssp             -------------------------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHH
T ss_pred             -------------------------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHH
Confidence                                     1223344444  4458999999999743     2344689999999999999999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        298 RDKGNFDDATTRFYTACVVEAFDYLHSR---------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       298 ~~~~~l~~~~~~~~~~ql~~al~~lH~~---------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ... ..++..+..++.|++.||.|||++         ||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       104 ~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~  172 (336)
T 3g2f_A          104 SLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG  172 (336)
T ss_dssp             HHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             hhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeeccc
Confidence            764 468899999999999999999999         999999999999999999999999999987653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=2.1e-25  Score=205.26  Aligned_cols=152  Identities=26%  Similarity=0.444  Sum_probs=130.0

Q ss_pred             cCcEEE-EEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        149 SDLRVI-TTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       149 ~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ++|.+. +.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   66 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKRR----------------------------------------   66 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESEE----------------------------------------
T ss_pred             hEEeeccceeCCCCCeEEEEEEEC-CCCCEEEEEEEehhh----------------------------------------
Confidence            456676 78999999999999865 458899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                       ........+.+|+.+++.+ .||||+++++++...+.+|+||||+++++|.+++...  ..++
T Consensus        67 -----------------~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  129 (327)
T 3lm5_A           67 -----------------RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS  129 (327)
T ss_dssp             -----------------TTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCC
T ss_pred             -----------------cchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCC
Confidence                             1112345678899999998 5699999999999999999999999999999988643  5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.|++.||.|||++||+||||||+||+++.   ++.+||+|||+++.+..
T Consensus       130 ~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  186 (327)
T 3lm5_A          130 ENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH  186 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence            9999999999999999999999999999999999987   78999999999987643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=1.6e-25  Score=202.25  Aligned_cols=150  Identities=24%  Similarity=0.333  Sum_probs=123.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..-++|++.+.||+|+||.||++.+.    ..+|+|.+....                                      
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~--------------------------------------   58 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTA--------------------------------------   58 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSS--------------------------------------
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccC--------------------------------------
Confidence            45578999999999999999999743    248999875431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ......+.+.+|+.+++.++||||++++++. .....++||||+++++|.+++... ..++
T Consensus        59 -------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  118 (289)
T 3og7_A           59 -------------------PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFE  118 (289)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CC
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCC
Confidence                               1223346688999999999999999999965 556689999999999999998643 4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       119 ~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A          119 MKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccc
Confidence            99999999999999999999999999999999999999999999999997543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=3.5e-25  Score=203.31  Aligned_cols=150  Identities=23%  Similarity=0.411  Sum_probs=130.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~---------------------------------------   61 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTG---------------------------------------   61 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCS---------------------------------------
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEEC-CCCCeEEEEEEecCc---------------------------------------
Confidence            4578999999999999999999865 457899999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHh
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                           .....+.+|+.+++.+ +||||+++++++..      .+.+|+||||+++++|.+++..
T Consensus        62 ---------------------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  120 (326)
T 2x7f_A           62 ---------------------DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN  120 (326)
T ss_dssp             ---------------------STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHH
T ss_pred             ---------------------ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHh
Confidence                                 1224578899999998 89999999999876      4689999999999999999986


Q ss_pred             c--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 K--GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~--~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .  ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..+.
T Consensus       121 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          121 TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             SGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            4  469999999999999999999999999999999999999999999999999987653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.93  E-value=3.1e-25  Score=203.51  Aligned_cols=159  Identities=23%  Similarity=0.364  Sum_probs=135.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+........                                   
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~-----------------------------------   84 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDW-----------------------------------   84 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEET-TTTEEEEEEEEEGGGCCCE-----------------------------------
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEecccchhh-----------------------------------
Confidence            4678999999999999999999855 4578999999876422110                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCC-cchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~l  303 (362)
                                        ........+.+|+.+++.++  ||||+++++++..++..+++||++.+ ++|.+++...+.+
T Consensus        85 ------------------~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l  146 (320)
T 3a99_A           85 ------------------GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL  146 (320)
T ss_dssp             ------------------EECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSC
T ss_pred             ------------------hhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCC
Confidence                              01112345678999999995  59999999999999999999999976 8999999988889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~~~  359 (362)
                      ++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||+++.+...
T Consensus       147 ~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~  203 (320)
T 3a99_A          147 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT  203 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc
Confidence            9999999999999999999999999999999999999 7899999999999876543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=3.9e-25  Score=205.27  Aligned_cols=150  Identities=23%  Similarity=0.383  Sum_probs=130.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+. .+++.+|+|.+...                                        
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~----------------------------------------   47 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPF----------------------------------------   47 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCC----------------------------------------
T ss_pred             cccceEEeeEEcCCCCeEEEEEEEC-CCCcEEEEEeeccc----------------------------------------
Confidence            4578999999999999999999855 45788999988532                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                        ........+.+|+.+++.++||||+++++++...     ...|++||++ +++|.+++.. +
T Consensus        48 ------------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~  107 (353)
T 2b9h_A           48 ------------------DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIST-Q  107 (353)
T ss_dssp             ------------------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC-SEEHHHHHHH-C
T ss_pred             ------------------ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc-CccHHHHHhh-c
Confidence                              1122345577899999999999999999987653     6799999999 4799998876 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       108 ~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A          108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            79999999999999999999999999999999999999999999999999998764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=2.3e-25  Score=202.61  Aligned_cols=153  Identities=26%  Similarity=0.475  Sum_probs=127.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||.+.+. .+++.+|+|++.+...                                       
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~---------------------------------------   43 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDS-ETLCRRAVKILKKKKL---------------------------------------   43 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBT-TTCCEEEEEEECHHHH---------------------------------------
T ss_pred             ccceeEeeEEecCCCeEEEEEEEC-CCCcEEEEEEeccccc---------------------------------------
Confidence            578999999999999999999854 5678999999865411                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeee--eccceEEEEEeccCCcchHHHHHh--cCCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF--KDKKYLYMLMESCLGGELWTILRD--KGNF  303 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~--~~~l  303 (362)
                                      .........+.+|+.+++.++||||+++++++  ......|+||||++++ |.+++..  ...+
T Consensus        44 ----------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~  106 (305)
T 2wtk_C           44 ----------------RRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRF  106 (305)
T ss_dssp             ----------------HHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSC
T ss_pred             ----------------cccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCccccc
Confidence                            00112345688999999999999999999998  4556899999999655 7777765  3469


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.+.
T Consensus       107 ~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C          107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            999999999999999999999999999999999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.2e-25  Score=204.42  Aligned_cols=145  Identities=22%  Similarity=0.355  Sum_probs=125.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+.   ++.+|+|.+...                                        
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~----------------------------------------   71 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTT----------------------------------------   71 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEEEGG----------------------------------------
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC---CceEEEEEEecc----------------------------------------
Confidence            3578999999999999999999854   678999987432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc--CCcceeeeeeeeecc----ceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA--NCDFIVKLYKTFKDK----KYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                            .......|.+++...  +||||+++++++...    ..+|+||||+++++|.++++. 
T Consensus        72 ----------------------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-  128 (337)
T 3mdy_A           72 ----------------------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-  128 (337)
T ss_dssp             ----------------------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-
T ss_pred             ----------------------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-
Confidence                                  112244556666554  999999999998776    789999999999999999976 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHC--------CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSR--------NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~--------~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+++..+..++.|++.||.|||++        ||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       129 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~  193 (337)
T 3mdy_A          129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI  193 (337)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeec
Confidence            4699999999999999999999999        99999999999999999999999999997664

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.93  E-value=1.4e-25  Score=219.80  Aligned_cols=149  Identities=23%  Similarity=0.397  Sum_probs=130.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.+  +..+|+|.+....                                      
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~--------------------------------------  303 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT--------------------------------------  303 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT--TEEEEEEEECTTS--------------------------------------
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC--CceEEEEEeCCCC--------------------------------------
Confidence            345789999999999999999998654  4569999886531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNF  303 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l  303 (362)
                                            ...+.+.+|+.+|+.++||||+++++++.. ..+|+||||+++++|.+++...  ..+
T Consensus       304 ----------------------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l  360 (535)
T 2h8h_A          304 ----------------------MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL  360 (535)
T ss_dssp             ----------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTC
T ss_pred             ----------------------CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCC
Confidence                                  112458899999999999999999999876 6689999999999999999753  469


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++.+.
T Consensus       361 ~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          361 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  414 (535)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence            999999999999999999999999999999999999999999999999998654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.93  E-value=4.5e-25  Score=202.51  Aligned_cols=152  Identities=24%  Similarity=0.390  Sum_probs=128.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+...+++.+|+|.+.....                                       
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~---------------------------------------   50 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---------------------------------------   50 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC---------------------------------------
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcc---------------------------------------
Confidence            47899999999999999999997656688899998865310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHh
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                        .......+.+|+.+++.+   +||||+++++++.     ....+++||||++ ++|.+++..
T Consensus        51 ------------------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  111 (326)
T 1blx_A           51 ------------------EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK  111 (326)
T ss_dssp             ------------------TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHH
T ss_pred             ------------------cccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHh
Confidence                              111223456777777766   8999999999986     5678999999996 699999986


Q ss_pred             cC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KG--NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~--~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus       112 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  171 (326)
T 1blx_A          112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  171 (326)
T ss_dssp             SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCC
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccccc
Confidence            43  48999999999999999999999999999999999999999999999999997653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=1.5e-25  Score=209.88  Aligned_cols=152  Identities=16%  Similarity=0.153  Sum_probs=111.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                         
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~-----------------------------------------   99 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMGA-----------------------------------------   99 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECCS-----------------------------------------
T ss_pred             eeeeeeeeccCCCCEEEEEEEEC-CCCceeEEEEEEecc-----------------------------------------
Confidence            45999999999999999999965 457899999987641                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc--CCcceeeeeee-------eecc-----------------ceEE
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA--NCDFIVKLYKT-------FKDK-----------------KYLY  282 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~~i~~~~~~-------~~~~-----------------~~~~  282 (362)
                                     .........+.+|+.+++.+  +||||++++..       +..+                 ..+|
T Consensus       100 ---------------~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (371)
T 3q60_A          100 ---------------ENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYL  164 (371)
T ss_dssp             ---------------TTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEE
T ss_pred             ---------------cccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEE
Confidence                           11223344567785555544  69998886533       3221                 4489


Q ss_pred             EEEeccCCcchHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        283 MLMESCLGGELWTILRDK-GNFDDATT------RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       283 lv~e~~~~~~L~~~l~~~-~~l~~~~~------~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      +||||++ ++|.+++... ..++....      ..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus       165 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~  243 (371)
T 3q60_A          165 LLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWK  243 (371)
T ss_dssp             EEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEE
T ss_pred             EEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeee
Confidence            9999997 8999999864 33444444      56779999999999999999999999999999999999999999987


Q ss_pred             cCC
Q psy14740        356 LIG  358 (362)
Q Consensus       356 ~~~  358 (362)
                      ...
T Consensus       244 ~~~  246 (371)
T 3q60_A          244 VGT  246 (371)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=6.2e-25  Score=202.31  Aligned_cols=151  Identities=25%  Similarity=0.362  Sum_probs=130.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+...+++.+|+|++...                                        
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----------------------------------------   51 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----------------------------------------   51 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----------------------------------------
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----------------------------------------
Confidence            3478999999999999999999875666889999987542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcc------eeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF------IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                          ......+.+|+.+++.++|++      ++++++++...+.+|+||||+ +++|.+++...
T Consensus        52 --------------------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~  110 (339)
T 1z57_A           52 --------------------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKEN  110 (339)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             --------------------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhc
Confidence                                112345678888888887664      999999999999999999999 89999999876


Q ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-------------------CCcEEEEecccceecCC
Q psy14740        301 G--NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-------------------SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 ~--~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-------------------~~~~kl~DFG~a~~~~~  358 (362)
                      +  ++++..+..++.|++.||.|||++||+||||||+||+++.                   ++.+||+|||+++....
T Consensus       111 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          111 GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc
Confidence            5  5899999999999999999999999999999999999987                   66799999999986543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.92  E-value=3.8e-25  Score=206.24  Aligned_cols=159  Identities=18%  Similarity=0.274  Sum_probs=127.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||++.+.  .++.+|+|.+........                                   
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~-----------------------------------   62 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGR-----------------------------------   62 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTS-----------------------------------
T ss_pred             hccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccc-----------------------------------
Confidence            3578999999999999999999854  378899999865421100                                   


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHhc-
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                   ...........+.+.+|+.+++.++||||+++++++.     ....+|+||||++ ++|.+.+... 
T Consensus        63 -------------~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~  128 (362)
T 3pg1_A           63 -------------TVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR  128 (362)
T ss_dssp             -------------CEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT
T ss_pred             -------------hhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc
Confidence                         0001122334467899999999999999999999983     3457999999995 7888877654 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       129 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (362)
T 3pg1_A          129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED  184 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC----
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccc
Confidence            36999999999999999999999999999999999999999999999999999754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.92  E-value=5.8e-25  Score=201.00  Aligned_cols=148  Identities=26%  Similarity=0.442  Sum_probs=122.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+...                                         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~-----------------------------------------   47 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLT-----------------------------------------   47 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEET-TTTEEEEEEEEECC-----------------------------------------
T ss_pred             CCceeEEEEeccCCCeEEEEEEEC-CCCeEEEEEEEecC-----------------------------------------
Confidence            478999999999999999999865 45789999987532                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--------------ccceEEEEEeccCCcch
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--------------DKKYLYMLMESCLGGEL  293 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------------~~~~~~lv~e~~~~~~L  293 (362)
                                        .......+.+|+.+++.++||||+++++++.              .....|+||||++ ++|
T Consensus        48 ------------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L  108 (320)
T 2i6l_A           48 ------------------DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDL  108 (320)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEH
T ss_pred             ------------------ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCH
Confidence                              1223456789999999999999999998873              3467999999995 799


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecC
Q psy14740        294 WTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       294 ~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~  357 (362)
                      .+++.. +++++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||+++.+.
T Consensus       109 ~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~  172 (320)
T 2i6l_A          109 ANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD  172 (320)
T ss_dssp             HHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC-
T ss_pred             HHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccC
Confidence            998865 5799999999999999999999999999999999999997 56799999999998653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.92  E-value=3.6e-25  Score=201.58  Aligned_cols=148  Identities=22%  Similarity=0.273  Sum_probs=127.9

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      ...+.||+|+||.||++..   .++.+|+|.+....                                            
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~--------------------------------------------   66 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMV--------------------------------------------   66 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES---SSCEEEEEEECCCT--------------------------------------------
T ss_pred             ccCCccccCCCeEEEEEEE---CCceEEEEEEeccc--------------------------------------------
Confidence            3447899999999999984   36789999886431                                            


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh---cCCCCHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD---KGNFDDATT  308 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~  308 (362)
                                 ..........+.+|+.+++.++||||+++++++.+.+..|++|||+++++|.+++..   ..++++..+
T Consensus        67 -----------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  135 (307)
T 2nru_A           67 -----------DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR  135 (307)
T ss_dssp             -----------TSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHH
T ss_pred             -----------CcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHH
Confidence                       111223446688999999999999999999999999999999999999999999874   245899999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus       136 ~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  184 (307)
T 2nru_A          136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE  184 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccc
Confidence            9999999999999999999999999999999999999999999998654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=3.1e-25  Score=220.61  Aligned_cols=150  Identities=28%  Similarity=0.426  Sum_probs=128.3

Q ss_pred             cCcEEEE-EecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        149 SDLRVIT-TLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       149 ~~~~~~~-~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      +++.+.+ .||+|+||.||++.+.. ..+..||+|.+.+..                                       
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---------------------------------------  375 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---------------------------------------  375 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---------------------------------------
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---------------------------------------
Confidence            4456666 79999999999997653 235679999986431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                         .......+.+|+.+|+.++||||+++++++.. +.+|+||||+++++|.+++... ..+++
T Consensus       376 -------------------~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~  435 (613)
T 2ozo_A          376 -------------------EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPV  435 (613)
T ss_dssp             -------------------SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCH
T ss_pred             -------------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCH
Confidence                               12234668899999999999999999999876 5699999999999999998754 45999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       436 ~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~  487 (613)
T 2ozo_A          436 SNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG  487 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence            9999999999999999999999999999999999999999999999998653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.92  E-value=5.4e-25  Score=199.07  Aligned_cols=150  Identities=29%  Similarity=0.478  Sum_probs=128.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ++++.....||+|+||.||++.+. .+++.+|+|.+...+                                        
T Consensus        21 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~----------------------------------------   59 (295)
T 2clq_A           21 YDENGDRVVLGKGTYGIVYAGRDL-SNQVRIAIKEIPERD----------------------------------------   59 (295)
T ss_dssp             BCTTSSBCEEEECSSSEEEEEEET-TTCCEEEEEEEECCC----------------------------------------
T ss_pred             ccCCCCcEEEeecCcEEEEEEEEC-CCCeEEEEEEccCCc----------------------------------------
Confidence            444555568999999999999865 457889999875431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC---CCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG---NFD  304 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~  304 (362)
                                         ......+.+|+.+++.++||||+++++++...+..++||||+++++|.+++....   .++
T Consensus        60 -------------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  120 (295)
T 2clq_A           60 -------------------SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN  120 (295)
T ss_dssp             -------------------C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTC
T ss_pred             -------------------hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCcc
Confidence                               1223567899999999999999999999999999999999999999999998642   467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+|+||||+||+++. ++.++|+|||+++.+.
T Consensus       121 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A          121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            8999999999999999999999999999999999987 8999999999998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.92  E-value=8.9e-25  Score=208.48  Aligned_cols=149  Identities=25%  Similarity=0.405  Sum_probs=127.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|++.+.||+|+||.||++.+. .+++.||+|.+...                                         
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~-~~~~~vAvK~~~~~-----------------------------------------  133 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDH-KVHQHVALKMVRNE-----------------------------------------  133 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEET-TTTEEEEEEEECSC-----------------------------------------
T ss_pred             cCcEEEEEEcccCccEEEEEEEEC-CCCcEEEEEEECCc-----------------------------------------
Confidence            357999999999999999999855 45789999998543                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc------CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA------NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                         ......+.+|+.+++.+      +||||+++++++...+.+++|||++ +++|.+++....
T Consensus       134 -------------------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~  193 (429)
T 3kvw_A          134 -------------------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNK  193 (429)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             -------------------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc-CCCHHHHHHhcc
Confidence                               11224456677777765      6789999999999999999999999 579999887653


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc--EEEEecccceecCC
Q psy14740        302 --NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY--VKLVDFGFAKKLIG  358 (362)
Q Consensus       302 --~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~--~kl~DFG~a~~~~~  358 (362)
                        .+++..++.++.|++.||.|||++||+||||||+|||++.++.  +||+|||+|+....
T Consensus       194 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~  254 (429)
T 3kvw_A          194 FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ  254 (429)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence              4999999999999999999999999999999999999999887  99999999976544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.92  E-value=5.1e-25  Score=209.61  Aligned_cols=145  Identities=28%  Similarity=0.438  Sum_probs=120.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.||+|+||.||++.+. .+++.||+|.+.+..                                        
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~~vaiK~~~~~~----------------------------------------   91 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDK----------------------------------------   91 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECCT----------------------------------------
T ss_pred             cceEEeeeEEeeCCCEEEEEEEEC-CCCcEEEEEEecccc----------------------------------------
Confidence            457999999999999999999965 457899999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHh--
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRD--  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~--  299 (362)
                                             ....+|+++|+.++||||+++++++..      ..++++||||++ ++|.+++..  
T Consensus        92 -----------------------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~  147 (420)
T 1j1b_A           92 -----------------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYS  147 (420)
T ss_dssp             -----------------------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-EEHHHHHHHHH
T ss_pred             -----------------------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc-ccHHHHHHHHh
Confidence                                   112369999999999999999998743      235789999995 566665542  


Q ss_pred             --cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-CcEEEEecccceecC
Q psy14740        300 --KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-GYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 --~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-~~~kl~DFG~a~~~~  357 (362)
                        ...+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus       148 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          148 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence              4569999999999999999999999999999999999999965 678999999998764

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.92  E-value=2.3e-25  Score=224.43  Aligned_cols=150  Identities=26%  Similarity=0.403  Sum_probs=127.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+...+++.+|+|.+....                                        
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~----------------------------------------  118 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG----------------------------------------  118 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC----------------------------------------
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC----------------------------------------
Confidence            4789999999999999999999765467889999875421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccce-----EEEEEeccCCcchHHHHHhcCC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY-----LYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                        .......+.+|+.+++.++||||+++++++...+.     .|+||||++|++|.+++..  .
T Consensus       119 ------------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~  178 (681)
T 2pzi_A          119 ------------------DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--K  178 (681)
T ss_dssp             ------------------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--C
T ss_pred             ------------------CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--C
Confidence                              12234567899999999999999999999887655     7999999999999998764  6


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||++||+||||||+|||++.+ .+||+|||+++.+..
T Consensus       179 l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS  233 (681)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence            9999999999999999999999999999999999999875 899999999987653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=7.2e-25  Score=201.81  Aligned_cols=150  Identities=32%  Similarity=0.419  Sum_probs=128.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-.+|++.+.||+|+||.||++.+. .+++.+|+|.+...                                        
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~----------------------------------------   64 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLSN----------------------------------------   64 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEES----------------------------------------
T ss_pred             cCceEEEEEEEccCCceEEEEEEEC-CCCcEEEEEEecCC----------------------------------------
Confidence            3458999999999999999999965 45789999987432                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeee--------eccceEEEEEeccCCcchHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTF--------KDKKYLYMLMESCLGGELWTIL  297 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l  297 (362)
                                         .......+.+|+.+++.+. ||||+++++++        .....++++|||+ +|+|.+++
T Consensus        65 -------------------~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l  124 (337)
T 3ll6_A           65 -------------------EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFL  124 (337)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECC-SEEHHHHH
T ss_pred             -------------------chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEec-CCCHHHHH
Confidence                               1223355788999999995 99999999988        3455689999999 58999888


Q ss_pred             Hh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        298 RD---KGNFDDATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       298 ~~---~~~l~~~~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..   .+.+++..++.++.|++.||.|||++|  |+||||||+|||++.++.+||+|||+++.+.
T Consensus       125 ~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  189 (337)
T 3ll6_A          125 KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS  189 (337)
T ss_dssp             HHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred             HHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence            65   456999999999999999999999999  9999999999999999999999999998664

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.92  E-value=3.8e-25  Score=207.09  Aligned_cols=149  Identities=21%  Similarity=0.359  Sum_probs=126.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|.+.+.||+|+||.||++.+. .+++.+|+|.+.+..                                        
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~----------------------------------------   79 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPF----------------------------------------   79 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTT----------------------------------------
T ss_pred             cccEEEEeEEecCCCeEEEEEEEC-CCCCEEEEEEecccc----------------------------------------
Confidence            368999999999999999999855 468899999886431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceE------EEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL------YMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ........+.+|+.+++.++||||+++++++...+..      |+||||+ .++|.+++.  .
T Consensus        80 -----------------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~--~  139 (371)
T 4exu_A           80 -----------------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMG--M  139 (371)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECC-CEEHHHHTT--S
T ss_pred             -----------------cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccc-cccHHHHhh--c
Confidence                             1223346678999999999999999999999876654      9999999 478988874  3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       140 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            59999999999999999999999999999999999999999999999999997653

>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}

Probab=99.92  E-value=8.4e-25  Score=205.28  Aligned_cols=216  Identities=20%  Similarity=0.342  Sum_probs=170.3

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|++| +++++..|+.++..+.|++|++||++||+++.+|+|++|.|++++.    +  ..+..+++|++|||+
T Consensus       131 ~l~~~~lF~~L-~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~----~--~~v~~l~~G~~fGe~  203 (381)
T 4din_B          131 AISKNVLFAHL-DDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVN----G--EWVTNISEGGSFGEL  203 (381)
T ss_dssp             HHTTCTTSSSC-CHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEET----T--EEEEEEESSCCBCGG
T ss_pred             HHhCChhhhcC-CHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEEC----C--eEeeeCCCCCEEEch
Confidence            47889999999 9999999999999999999999999999999999999999999952    2  468899999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhh---------ccccCcEEEEE
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRS---------LRLSDLRVITT  156 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  156 (362)
                      +++.+.||++||+|.  ++|++|.|+++.|.+++..+|.+..+++..+..+......+..         .....|.-.+.
T Consensus       204 all~~~~r~atv~A~--~~~~l~~i~~~~f~~ll~~~~~~~~~~~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~  281 (381)
T 4din_B          204 ALIYGTPRAATVKAK--TDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEK  281 (381)
T ss_dssp             GGTSCCBCSSEEEES--SSCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCB
T ss_pred             HHhcCCCcceEEEEC--CCEEEEEEchHHHHHhhhhhhHHHHHHHHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCE
Confidence            999999999999999  5699999999999999999999988777666554433332211         11122221111


Q ss_pred             -ecccce---------ecEEEEEecCCCCCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        157 -LGVGGF---------GRVELVQIAGDPSRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       157 -lg~G~~---------g~v~~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                       +.+|.-         |.|.......+.++...+..+.++++||.     +.++.+++.|.++  +.|+.|+++.|.+++
T Consensus       282 I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~--~~ll~i~~~~f~~ll  359 (381)
T 4din_B          282 IVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGP--LKCVKLDRPRFERVL  359 (381)
T ss_dssp             SSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSC--BEEEEEEHHHHHHHH
T ss_pred             EEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCC--EEEEEEeHHHHHHHH
Confidence             222332         44444432223344667888999999983     5788999999765  999999999999999


Q ss_pred             cchHHhhhhcc
Q psy14740        222 SSLDEIRTKYV  232 (362)
Q Consensus       222 ~~~~~~~~~~~  232 (362)
                      +...++..+..
T Consensus       360 ~~~~~i~~~~~  370 (381)
T 4din_B          360 GPCSEILKRNI  370 (381)
T ss_dssp             CCHHHHHHTTH
T ss_pred             hhhHHHHHHHH
Confidence            99988876533

>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}

Probab=99.92  E-value=4.2e-24  Score=194.05  Aligned_cols=217  Identities=26%  Similarity=0.381  Sum_probs=166.8

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|..+ +++++..|+..++.+.|++|++||++||+++.+|+|++|.|++...      ...+..+.||++|||+
T Consensus        40 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~------g~~~~~~~~G~~fGe~  112 (299)
T 3shr_A           40 AILDNDFMKNL-ELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKE------GVKLCTMGPGKVFGEL  112 (299)
T ss_dssp             HHHTCTTTTTS-CHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEEET------TEEEEEECTTCEESCS
T ss_pred             HHhhCHHHHcC-CHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEEC------CEEEEEeCCCCeeeHh
Confidence            46889999999 9999999999999999999999999999999999999999999642      2679999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhhc---cccCcEEEEEecc---
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSL---RLSDLRVITTLGV---  159 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~lg~---  159 (362)
                      +++.+.||++||+|.  ++|++|.|++++|..++...|.........+.....+...+...   .+........+..   
T Consensus       113 ~ll~~~~~~~tv~a~--~~~~l~~i~~~~~~~i~~~~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~  190 (299)
T 3shr_A          113 AILYNCTRTATVKTL--VNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEY  190 (299)
T ss_dssp             GGGTTTBCCSEEEES--SCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCE
T ss_pred             HHhcCCCCCcEEEEc--CCeEEEEEcHHHHHHHhhHhHHHHHHHHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCE
Confidence            999999999999999  55999999999999999999987765544443332222222110   1111112222222   


Q ss_pred             ----cce---------ecEEEEEecCCCCCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehhhHHhhc
Q psy14740        160 ----GGF---------GRVELVQIAGDPSRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQETFNQLI  221 (362)
Q Consensus       160 ----G~~---------g~v~~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~  221 (362)
                          |.-         |.|.........++...+..+.+++++|.     +.++.+++.|.  +.+.++.++++.|.+++
T Consensus       191 I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~--~~~~l~~i~~~~f~~ll  268 (299)
T 3shr_A          191 IIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLI  268 (299)
T ss_dssp             EECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEES--SSEEEEEEEHHHHHHHH
T ss_pred             EEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEEC--CCEEEEEEeHHHHHHHH
Confidence                322         44544443324567788889999999984     56788888885  45999999999999999


Q ss_pred             cchHHhhhhccc
Q psy14740        222 SSLDEIRTKYVD  233 (362)
Q Consensus       222 ~~~~~~~~~~~~  233 (362)
                      ...+++......
T Consensus       269 ~~~p~~~~~~~~  280 (299)
T 3shr_A          269 GGLDDVSNKAYE  280 (299)
T ss_dssp             TTCCCCCHHHHH
T ss_pred             ccHHHHHHHHHH
Confidence            887766554433

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=8.3e-25  Score=202.12  Aligned_cols=145  Identities=19%  Similarity=0.261  Sum_probs=128.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|.+.+.||+|+||.||++.+.   ++.+|+|.+...                                         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~-----------------------------------------   76 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-----------------------------------------   76 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEECGG-----------------------------------------
T ss_pred             cccEEEEeeecCCCCcEEEEEEEc---CccEEEEEeCch-----------------------------------------
Confidence            468999999999999999999863   678999987532                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhh--cCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE--ANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                           ....+.+|.+++..  ++||||+++++++....    .+|+||||+++++|.+++.+ .
T Consensus        77 ---------------------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~  134 (342)
T 1b6c_B           77 ---------------------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-Y  134 (342)
T ss_dssp             ---------------------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-C
T ss_pred             ---------------------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-c
Confidence                                 12346778888887  79999999999988775    89999999999999999976 4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH--------HCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLH--------SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH--------~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..++.++.|++.||.|||        ++||+||||||+||+++.++.+||+|||+++....
T Consensus       135 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  199 (342)
T 1b6c_B          135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  199 (342)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccc
Confidence            6999999999999999999999        89999999999999999999999999999977643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.92  E-value=5.9e-25  Score=200.46  Aligned_cols=146  Identities=29%  Similarity=0.491  Sum_probs=123.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.   ++.+|+|.+...                                       
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~---------------------------------------   42 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESE---------------------------------------   42 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET---TEEEEEEECSST---------------------------------------
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC---CeeEEEEEecCh---------------------------------------
Confidence            45688999999999999999999864   567999987432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC---C
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG---N  302 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~  302 (362)
                                            .....+.+|+.+++.++||||+++++++.+  ..|+||||+++++|.+++....   .
T Consensus        43 ----------------------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~   98 (307)
T 2eva_A           43 ----------------------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPY   98 (307)
T ss_dssp             ----------------------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEEC
T ss_pred             ----------------------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCc
Confidence                                  123567899999999999999999998874  4799999999999999998654   3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH---CCcEeecCCCCcEEecCCCc-EEEEecccceecC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHS---RNIIYRDLKPENLLLSTSGY-VKLVDFGFAKKLI  357 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~---~~iiHrDikp~NIl~~~~~~-~kl~DFG~a~~~~  357 (362)
                      ++...+..++.|++.||.|||+   +||+||||||+||+++.++. +||+|||+++.+.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            7889999999999999999999   89999999999999998886 7999999997653

>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}

Probab=99.92  E-value=2.1e-24  Score=189.99  Aligned_cols=216  Identities=19%  Similarity=0.272  Sum_probs=162.9

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|.++ +++++..|+..++.+.|++|++|+++||+++.+|+|++|.|+++.   + +  ..+..++||++|||
T Consensus         7 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~---~-~--~~~~~~~~g~~fGe   79 (246)
T 3of1_A            7 KSIRNNFLFNKL-DSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV---N-D--NKVNSSGPGSSFGE   79 (246)
T ss_dssp             HHHHTCTTTTTS-CHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEES---T-T--SCCEEECTTCEECH
T ss_pred             HHHhcCHhhHhC-CHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE---C-C--EEEEecCCCCeeeh
Confidence            357899999999 999999999999999999999999999999999999999999984   2 2  23689999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhhc---cccCcEEEEE-----
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRSL---RLSDLRVITT-----  156 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----  156 (362)
                      ++++.+.||++|++|.  ++|++|.|++++|..++..+|.....+...+.........+...   .+........     
T Consensus        80 ~~l~~~~~~~~tv~a~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~  157 (246)
T 3of1_A           80 LALMYNSPRAATVVAT--SDCLLWALDRLTFRKILLGSSFKKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGE  157 (246)
T ss_dssp             HHHHHTCCCSSEEEES--SCEEEEEEEHHHHHHTTTTTTSHHHHHSHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTC
T ss_pred             hHHhcCCCCCcEEEEC--CCeEEEEEEhHHHHHHHHHhHHHHHHHHHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCC
Confidence            9999999999999999  55999999999999999999988776665555443333322111   1111111122     


Q ss_pred             --ecccceecEEEEEecCC-----CCCceeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        157 --LGVGGFGRVELVQIAGD-----PSRSFALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       157 --lg~G~~g~v~~~~~~~~-----~~~~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                        +.+|.-+.-......|.     .... .+..+.+++++|     .+.++.+++.|..  .+.++.++++.|.++++..
T Consensus       158 ~i~~~g~~~~~~y~I~~G~v~v~~~~~~-~~~~l~~g~~fGe~~~~~~~~~~~~v~a~~--~~~~~~i~~~~f~~ll~~~  234 (246)
T 3of1_A          158 TIIREGDQGENFYLIEYGAVDVSKKGQG-VINKLKDHDYFGEVALLNDLPRQATVTATK--RTKVATLGKSGFQRLLGPA  234 (246)
T ss_dssp             EEECTTSBCCEEEEEEECEEEEEETTTE-EEEEEETTCEECHHHHHHTCBCSSEEEESS--CEEEEEEEHHHHHHHCTTH
T ss_pred             EEEeCCCcCCEEEEEEecEEEEEEcCCc-eEEEcCCCCcccHHHHhCCCCcccEEEECC--CEEEEEEeHHHHHHHhccH
Confidence              22233222211111210     0111 567788899998     3678899999985  4999999999999999998


Q ss_pred             HHhhhhcc
Q psy14740        225 DEIRTKYV  232 (362)
Q Consensus       225 ~~~~~~~~  232 (362)
                      +++..+..
T Consensus       235 ~~~~~~~~  242 (246)
T 3of1_A          235 VDVLKLND  242 (246)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhccC
Confidence            88876543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.92  E-value=8.1e-25  Score=218.99  Aligned_cols=152  Identities=26%  Similarity=0.427  Sum_probs=130.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC--CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD--PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .++|.+.+.||+|+||.||++.+...  .+..+|+|.+...                                       
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---------------------------------------  429 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---------------------------------------  429 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---------------------------------------
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---------------------------------------
Confidence            46799999999999999999986532  3456888876432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                         ........+.+|+.+++.++||||+++++++. .+..|+||||+++++|.+++...+ .++
T Consensus       430 -------------------~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~  489 (656)
T 2j0j_A          430 -------------------TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLD  489 (656)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCC
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCC
Confidence                               11223456889999999999999999999985 456899999999999999998654 689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       490 ~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            999999999999999999999999999999999999999999999999987644

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.92  E-value=1.4e-24  Score=198.25  Aligned_cols=150  Identities=27%  Similarity=0.459  Sum_probs=129.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .-.+|++.+.||+|+||.||++.+.  +++.+|+|.+....                                       
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~---------------------------------------   64 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEE---------------------------------------   64 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSS---------------------------------------
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEecccc---------------------------------------
Confidence            4567999999999999999999854  37789999886431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                        ........+.+|+.++..++  ||||+++++++...+.+|++|| +.+++|.+++...+.++
T Consensus        65 ------------------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~  125 (313)
T 3cek_A           65 ------------------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID  125 (313)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCC
T ss_pred             ------------------ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCC
Confidence                              11223456889999999997  5999999999999999999999 45899999999888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++ ++.+||+|||+++.+.
T Consensus       126 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          126 PWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  177 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccccc
Confidence            999999999999999999999999999999999996 5899999999998654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.92  E-value=1.3e-24  Score=205.00  Aligned_cols=146  Identities=29%  Similarity=0.421  Sum_probs=119.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|++.+.||+|+||.||++.+..  +..+|+|.+.+..                                       
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~--~~~~aikk~~~~~---------------------------------------   76 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVE--SDEVAIKKVLQDK---------------------------------------   76 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETT--TEEEEEEEEECCT---------------------------------------
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECC--CCeEEEEEEecCc---------------------------------------
Confidence            34679999999999999999998653  3348888764321                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc------ceEEEEEeccCCcchHHHHH--
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK------KYLYMLMESCLGGELWTILR--  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~--  298 (362)
                                              ....+|+.+++.++||||+++++++...      .++|+||||++++ +.+.+.  
T Consensus        77 ------------------------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~  131 (394)
T 4e7w_A           77 ------------------------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHY  131 (394)
T ss_dssp             ------------------------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEE-HHHHHHHH
T ss_pred             ------------------------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCcc-HHHHHHHH
Confidence                                    1123699999999999999999998443      3489999999654 444332  


Q ss_pred             --hcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec-CCCcEEEEecccceecCC
Q psy14740        299 --DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-TSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       299 --~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~~  358 (362)
                        ....+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||+|+.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          132 AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA  194 (394)
T ss_dssp             HHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             HhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence              245799999999999999999999999999999999999999 799999999999987643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.92  E-value=6.6e-25  Score=204.00  Aligned_cols=149  Identities=20%  Similarity=0.351  Sum_probs=127.3

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      ..+|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~----------------------------------------   61 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPF----------------------------------------   61 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEESSTT----------------------------------------
T ss_pred             CceEEEeeeEecCCCeEEEEEEEC-CCCCEEEEEEecccc----------------------------------------
Confidence            468999999999999999999855 468899999886431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccce------EEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKY------LYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ........+.+|+.+++.++||||+++++++...+.      +|++|||++ ++|.+++..  
T Consensus        62 -----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--  121 (353)
T 3coi_A           62 -----------------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL--  121 (353)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS--
T ss_pred             -----------------cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC--
Confidence                             112234567899999999999999999999877643      599999995 788887753  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus       122 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            59999999999999999999999999999999999999999999999999997643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.92  E-value=1.8e-24  Score=203.77  Aligned_cols=134  Identities=26%  Similarity=0.394  Sum_probs=113.1

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+...                                         
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~-----------------------------------------   73 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDI-QGKKFVAMKVVKSA-----------------------------------------   73 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSC-----------------------------------------
T ss_pred             CCeEEEEEEeeecCCeeEEEEEec-CCCeEEEEEEEecC-----------------------------------------
Confidence            478999999999999999999855 45788999998542                                         


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC--------Ccceeeeeeeee----ccceEEEEEeccCCcchHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--------CDFIVKLYKTFK----DKKYLYMLMESCLGGELWT  295 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~  295 (362)
                                         ......+.+|+.+++.+.        ||||+++++++.    ....+|+||||+ +++|.+
T Consensus        74 -------------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~  133 (397)
T 1wak_A           74 -------------------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLK  133 (397)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHH
T ss_pred             -------------------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHH
Confidence                               112345778999998884        888999999987    567899999999 666666


Q ss_pred             HHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCC
Q psy14740        296 ILRDK--GNFDDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSG  343 (362)
Q Consensus       296 ~l~~~--~~l~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~  343 (362)
                      .+...  ..+++..++.++.|++.||.|||++ ||+||||||+|||++.++
T Consensus       134 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          134 WIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            66543  4699999999999999999999998 999999999999998775

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.92  E-value=2.8e-24  Score=194.29  Aligned_cols=148  Identities=24%  Similarity=0.350  Sum_probs=123.7

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                        
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----------------------------------------   46 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT----------------------------------------   46 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEC------------------------------------------
T ss_pred             CCceEEeeeecCCCCeEEEEEEEc-CCCceEEEEeecccc----------------------------------------
Confidence            468999999999999999999855 457889999754321                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeee-eeccceEEEEEeccCCcchHHHHHh-cCCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRD-KGNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~  305 (362)
                                           ....+.+|+.+++.++|++++..+.. +...+..+++|||+ +++|.+++.. ...+++
T Consensus        47 ---------------------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~  104 (296)
T 4hgt_A           47 ---------------------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSL  104 (296)
T ss_dssp             ----------------------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCH
T ss_pred             ---------------------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCH
Confidence                                 12347889999999988776665554 56778899999999 9999999985 456999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+++.+..
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  160 (296)
T 4hgt_A          105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence            9999999999999999999999999999999999   7889999999999987654

>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*

Probab=99.92  E-value=2.1e-23  Score=188.54  Aligned_cols=212  Identities=21%  Similarity=0.373  Sum_probs=168.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|+++ +++++..|+..++.+.|++|++|+++||+++.+|+|++|.|++..   + +  ..+..++||++|||.
T Consensus        40 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~-g--~~~~~l~~G~~fGe~  112 (291)
T 2qcs_B           40 AIEKNVLFSHL-DDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---N-N--EWATSVGEGGSFGEL  112 (291)
T ss_dssp             HTTTCHHHHTS-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE---T-T--EEEEEECTTCEECGG
T ss_pred             HHhcChhhhhC-CHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE---C-C--eEEEEcCCCCccchH
Confidence            47899999999 999999999999999999999999999999999999999999987   2 2  569999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhhhhh------------ccccCcEE
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEEFRS------------LRLSDLRV  153 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~  153 (362)
                      +++.+.||++|++|.  ++|++|.|++++|..++..+|.+...++..+..+..+...++.            ..+..-.+
T Consensus       113 ~l~~~~~~~~tv~a~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~  190 (291)
T 2qcs_B          113 ALIYGTPRAATVKAK--TNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQK  190 (291)
T ss_dssp             GGTCCCBCSSEEEES--SCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCE
T ss_pred             HHhcCCCCceEEEEC--CCEEEEEEEhHHHHHHHhhhHHHHHHHHHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCE
Confidence            999999999999999  5599999999999999999999988777665554433322211            11111112


Q ss_pred             EEEecccce---------ecEEEEEecCCCCCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehhhHHh
Q psy14740        154 ITTLGVGGF---------GRVELVQIAGDPSRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQETFNQ  219 (362)
Q Consensus       154 ~~~lg~G~~---------g~v~~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~~f~~  219 (362)
                      +  +-+|.-         |.|.......+.++...+..+.+++.||.     +.++.++++|..+  +.++.++++.|.+
T Consensus       191 i--~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~--~~~~~i~~~~f~~  266 (291)
T 2qcs_B          191 I--VVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPKAATVVARGP--LKCVKLDRPRFER  266 (291)
T ss_dssp             E--ECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSGGGTCCCCCSSEEEEEEE--EEEEEEEHHHHHH
T ss_pred             E--EeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHHHHcCCCCcceEEEECCc--EEEEEEcHHHHHH
Confidence            1  222221         55555443333335578888999999994     4678889999865  9999999999999


Q ss_pred             hccchHHhhhh
Q psy14740        220 LISSLDEIRTK  230 (362)
Q Consensus       220 ~~~~~~~~~~~  230 (362)
                      ++...+++..+
T Consensus       267 ~l~~~p~~~~~  277 (291)
T 2qcs_B          267 VLGPCSDILKR  277 (291)
T ss_dssp             HHCCHHHHHTT
T ss_pred             HhccHHHHHHH
Confidence            99988776654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=2e-24  Score=198.55  Aligned_cols=152  Identities=24%  Similarity=0.474  Sum_probs=126.5

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                      
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~--------------------------------------   59 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTV--------------------------------------   59 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEET-TTTEEEEEEEEECCC--------------------------------------
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEc-CCCCEEEEEEeeccc--------------------------------------
Confidence            45689999999999999999999855 457899999885431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHH-HHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-----
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKE-IMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-----  299 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----  299 (362)
                                          .......+..|.. +++.++||||+++++++..++..|+||||++ ++|.+++..     
T Consensus        60 --------------------~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~  118 (327)
T 3aln_A           60 --------------------DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVL  118 (327)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTT
T ss_pred             --------------------CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-CChHHHHHHHHhhh
Confidence                                1112233455555 6777899999999999999999999999995 588887763     


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        300 KGNFDDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       300 ~~~l~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ...+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          119 DDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             cccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            45699999999999999999999999 99999999999999999999999999997654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.91  E-value=9.7e-25  Score=206.72  Aligned_cols=145  Identities=23%  Similarity=0.448  Sum_probs=114.3

Q ss_pred             cEEE-EEecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        151 LRVI-TTLGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       151 ~~~~-~~lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      |.+. +.||+|+||.||++.+.. ..++.+|+|.+....                                         
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-----------------------------------------   60 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-----------------------------------------   60 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-----------------------------------------
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-----------------------------------------
Confidence            4543 479999999999998643 357789999885431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee--ccceEEEEEeccCCcchHHHHHhc------
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK--DKKYLYMLMESCLGGELWTILRDK------  300 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~------  300 (362)
                                          ....+.+|+.+|+.++||||+++++++.  ....+|+||||+ +++|.+++...      
T Consensus        61 --------------------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~  119 (405)
T 3rgf_A           61 --------------------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-EHDLWHIIKFHRASKAN  119 (405)
T ss_dssp             --------------------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECC-SEEHHHHHHHHHHHC--
T ss_pred             --------------------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCC-CCCHHHHHHHhcccccc
Confidence                                1134678999999999999999999984  477899999999 56888877632      


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe----cCCCcEEEEecccceecC
Q psy14740        301 ---GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL----STSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ---~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~----~~~~~~kl~DFG~a~~~~  357 (362)
                         ..+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+.+.
T Consensus       120 ~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  183 (405)
T 3rgf_A          120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  183 (405)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC---
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecC
Confidence               148999999999999999999999999999999999999    677899999999998654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.91  E-value=3.8e-24  Score=198.40  Aligned_cols=150  Identities=20%  Similarity=0.290  Sum_probs=127.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+....++.+|+|++...                                        
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----------------------------------------   56 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----------------------------------------   56 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----------------------------------------
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----------------------------------------
Confidence            3478999999999999999999976555578999998542                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcc------eeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF------IVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                          ......+.+|+.+++.++|++      ++.+++++...+.+|+||||+ ++++.+.+...
T Consensus        57 --------------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~  115 (355)
T 2eu9_A           57 --------------------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKEN  115 (355)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             --------------------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhc
Confidence                                112345678999999887766      999999999999999999999 66777776654


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe-------------------cCCCcEEEEecccceecC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL-------------------STSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~-------------------~~~~~~kl~DFG~a~~~~  357 (362)
                        ..+++..++.++.|++.||.|||++||+||||||+|||+                   +.++.+||+|||+++...
T Consensus       116 ~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~  193 (355)
T 2eu9_A          116 NFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH  193 (355)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc
Confidence              369999999999999999999999999999999999999                   567899999999998654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.91  E-value=1.5e-24  Score=201.90  Aligned_cols=150  Identities=27%  Similarity=0.363  Sum_probs=113.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.+|+|.+.+..                                       
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   60 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQDP---------------------------------------   60 (360)
T ss_dssp             HHTTEEEC----------CEEEEET-TTCCEEEEEEEECCT---------------------------------------
T ss_pred             hccceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEecCc---------------------------------------
Confidence            5789999999999999999999865 457899999874421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-------eEEEEEeccCCcchHHHHH-
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-------YLYMLMESCLGGELWTILR-  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~~~lv~e~~~~~~L~~~l~-  298 (362)
                                           .......+++..+..++||||+++++++...+       ++++||||+++ +|...+. 
T Consensus        61 ---------------------~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~  118 (360)
T 3e3p_A           61 ---------------------RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRN  118 (360)
T ss_dssp             ---------------------TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHH
T ss_pred             ---------------------cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHH
Confidence                                 11234567778888899999999999986533       38999999965 4444333 


Q ss_pred             ---hcCCCCHHHHHHHHHHHHHHHHHHH--HCCcEeecCCCCcEEecC-CCcEEEEecccceecCC
Q psy14740        299 ---DKGNFDDATTRFYTACVVEAFDYLH--SRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       299 ---~~~~l~~~~~~~~~~ql~~al~~lH--~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~~  358 (362)
                         ....+++..++.++.|++.||.|||  ++||+||||||+|||++. ++.+||+|||+++.+..
T Consensus       119 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~  184 (360)
T 3e3p_A          119 YYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP  184 (360)
T ss_dssp             HHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred             HhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence               4456899999999999999999999  999999999999999996 89999999999987643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.91  E-value=4.7e-24  Score=192.95  Aligned_cols=149  Identities=24%  Similarity=0.350  Sum_probs=126.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~---------------------------------------   46 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT---------------------------------------   46 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEEESCS---------------------------------------
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEc-CCCcEEEEEEecCCc---------------------------------------
Confidence            3578999999999999999999854 457899999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeee-eeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYK-TFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                            ....+.+|+.+++.++|++++..+. ++...+..++||||+ +++|.+++.. ...++
T Consensus        47 ----------------------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~  103 (296)
T 3uzp_A           47 ----------------------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFS  103 (296)
T ss_dssp             ----------------------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCC
T ss_pred             ----------------------chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCC
Confidence                                  1234788999999998877655555 446678899999999 9999999974 45699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+++.+..
T Consensus       104 ~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A          104 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            99999999999999999999999999999999999   4788999999999987654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=4.3e-24  Score=197.23  Aligned_cols=148  Identities=30%  Similarity=0.454  Sum_probs=120.9

Q ss_pred             cccCcEEEE-EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        147 RLSDLRVIT-TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       147 ~~~~~~~~~-~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..++|.+.. .||+|+||.||++.+. .+++.+|+|++....                                      
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~--------------------------------------   66 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHR-RTGQKCALKLLYDSP--------------------------------------   66 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESSH--------------------------------------
T ss_pred             ccceeEecceeeeeCCCeEEEEEEEC-CCCCEEEEEEecCcH--------------------------------------
Confidence            457899965 5999999999999865 458899999875420                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                               .........++.++||||+++++++..    ...+|+||||+++++|.+++....
T Consensus        67 -------------------------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~  121 (336)
T 3fhr_A           67 -------------------------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG  121 (336)
T ss_dssp             -------------------------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-
T ss_pred             -------------------------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcC
Confidence                                     011122233556799999999999876    556999999999999999998653


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCC
Q psy14740        302 --NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 --~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~  358 (362)
                        .+++..++.++.|++.||.|||++||+||||||+||+++.   ++.+||+|||+++....
T Consensus       122 ~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          122 DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence              5999999999999999999999999999999999999976   45599999999986643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.91  E-value=5.2e-24  Score=194.68  Aligned_cols=153  Identities=27%  Similarity=0.502  Sum_probs=119.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||+|+||.||++.+. .+++.+|+|.+....                                      
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--------------------------------------   62 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSG--------------------------------------   62 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEET-TTCCEEEEEEEETTS--------------------------------------
T ss_pred             hhhccccccceeeecCCeeEEEEEEe-cCCeEEEEEEecccc--------------------------------------
Confidence            35789999999999999999999865 457899999986531                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                         ........+..+..+++.++||||+++++++..++.+|+||||+ ++.+..+... ...++
T Consensus        63 -------------------~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~  122 (318)
T 2dyl_A           63 -------------------NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIP  122 (318)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCC
T ss_pred             -------------------cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCC
Confidence                               00111233445556778889999999999999999999999999 6677666654 45799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus       123 ~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          123 ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            999999999999999999995 99999999999999999999999999997653

>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}

Probab=99.91  E-value=7e-24  Score=170.58  Aligned_cols=131  Identities=15%  Similarity=0.287  Sum_probs=117.3

Q ss_pred             CCCcccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceE---EEEec
Q psy14740          1 MSKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY---IRTLY   77 (362)
Q Consensus         1 m~~~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~---~~~l~   77 (362)
                      |.....|+++|+|+++ +++++..++..++.+.|++|++|+++|++++.+|+|++|.|+++..+.+ +++..   +..++
T Consensus         2 M~~~~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~~~   79 (142)
T 3mdp_A            2 MISPERLRVYRFFASL-TDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGG-AGSAANSTVCSVV   79 (142)
T ss_dssp             CCCTTGGGGSHHHHTS-CHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC----------CEEEEEC
T ss_pred             CccHHHHhhCchhccC-CHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCC-CCceEeeeEEEec
Confidence            7778899999999999 9999999999999999999999999999999999999999999988877 44467   99999


Q ss_pred             CCCeeecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         78 KGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        78 ~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      ||++|||.+++.+.|++++++|.  ++|+++.|++++|.+++..+|.+...+++.+..
T Consensus        80 ~G~~fG~~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~l~~  135 (142)
T 3mdp_A           80 PGAIFGVSSLIKPYHYTSSARAT--KPVRVVDINGARLREMSENNQALGQVLMNNVAA  135 (142)
T ss_dssp             TTCEECGGGSSTTCBCSSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CCCEechHHHcCCCCceEEEEEC--CcEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence            99999999999999999999999  559999999999999999999999888877664

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.91  E-value=4e-25  Score=202.25  Aligned_cols=149  Identities=23%  Similarity=0.387  Sum_probs=126.3

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ...++|++.+.||+|+||.||++.+.+    .+++|.+....                                      
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~----~~avk~~~~~~--------------------------------------   67 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG----EVAIRLIDIER--------------------------------------   67 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS----SEEEEECCCCS--------------------------------------
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC----eEEEEEeecCC--------------------------------------
Confidence            457899999999999999999998542    48999876431                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~  304 (362)
                                         ........+.+|+.+++.++||||+++++++...+.++++|||+++++|.+++...+ .++
T Consensus        68 -------------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~  128 (319)
T 2y4i_B           68 -------------------DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLD  128 (319)
T ss_dssp             -------------------CCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCC
T ss_pred             -------------------CCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCC
Confidence                               011123446678899999999999999999999999999999999999999998754 699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      +..+..++.|++.||.|||++||+||||||+||+++ ++.++|+|||+++..
T Consensus       129 ~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            999999999999999999999999999999999998 689999999997654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.91  E-value=4.5e-24  Score=205.99  Aligned_cols=149  Identities=21%  Similarity=0.324  Sum_probs=127.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.||+|++....                                       
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~---------------------------------------   44 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKT---------------------------------------   44 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEET-TTCCEEEEEEEETTC---------------------------------------
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEEC-CCCcEEEEEEecccc---------------------------------------
Confidence            3578999999999999999999855 457899999765421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~  304 (362)
                                            ....+..|+.+++.++| ++++.+..++...+..++||||+ +++|.+++.. .+.++
T Consensus        45 ----------------------~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~  101 (483)
T 3sv0_A           45 ----------------------KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLS  101 (483)
T ss_dssp             ----------------------SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCC
T ss_pred             ----------------------ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCC
Confidence                                  12347889999999976 56666667777888999999999 9999999985 45799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEe---cCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLL---STSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~---~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.+..
T Consensus       102 ~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A          102 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            99999999999999999999999999999999999   5789999999999987654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.90  E-value=7.5e-24  Score=202.12  Aligned_cols=144  Identities=25%  Similarity=0.348  Sum_probs=119.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|.+.+.||+|+||.|+....  .+++.||+|.+.+..                                         
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~--~~~~~vAvK~~~~~~-----------------------------------------   60 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGM--FDNRDVAVKRILPEC-----------------------------------------   60 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEE--SSSSEEEEEEECTTT-----------------------------------------
T ss_pred             EEEecCCeeecCcCEEEEEEEE--eCCeEEEEEEECHHH-----------------------------------------
Confidence            4589999999999999765432  347889999885431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~  306 (362)
                                           .....+|+.+++.+ +||||+++++++.+....|+|||++ +++|.+++.... .+++.
T Consensus        61 ---------------------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~-~g~L~~~l~~~~~~~~~~  118 (432)
T 3p23_A           61 ---------------------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGL  118 (432)
T ss_dssp             ---------------------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC-SEEHHHHHHSSSCCCCSS
T ss_pred             ---------------------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC-CCCHHHHHHhcCCCccch
Confidence                                 12356799999998 8999999999999999999999999 579999997653 45666


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---C--CcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---S--GYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~--~~~kl~DFG~a~~~~  357 (362)
                      .+..++.|++.||.|||++||+||||||+|||++.   +  ..+||+|||+|+.+.
T Consensus       119 ~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             hHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            77899999999999999999999999999999953   2  358899999998764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=1.5e-24  Score=214.70  Aligned_cols=154  Identities=29%  Similarity=0.427  Sum_probs=128.6

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      ..+++|++.+.||.|+||.||++.+. .+++.+|+|.+...                                       
T Consensus        11 ~~~grY~i~~~LG~G~fG~Vyla~~~-~tg~~VAVKvi~~~---------------------------------------   50 (676)
T 3qa8_A           11 QTCGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQE---------------------------------------   50 (676)
T ss_dssp             ------CCCCCCCBCSSSBCCCCCCT-TTTCCEEECCCCSC---------------------------------------
T ss_pred             CCCCCeEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEeccc---------------------------------------
Confidence            35688999999999999999999854 55889999987542                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHh
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                         ........+.+|+.+++.++||||+++++++..      ++..|+||||+++++|.+++..
T Consensus        51 -------------------~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~  111 (676)
T 3qa8_A           51 -------------------LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ  111 (676)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHS
T ss_pred             -------------------CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHh
Confidence                               112234568899999999999999999998765      6778999999999999999986


Q ss_pred             cC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCc---EEEEecccceecCC
Q psy14740        300 KG---NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY---VKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~~---~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~---~kl~DFG~a~~~~~  358 (362)
                      ..   .+++..++.++.|++.||.|||++||+||||||+||+++.++.   ++|+|||+++.+..
T Consensus       112 ~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A          112 FENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             SSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence            43   5899999999999999999999999999999999999997664   99999999987644

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.90  E-value=1.1e-23  Score=201.15  Aligned_cols=145  Identities=27%  Similarity=0.361  Sum_probs=117.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|.+.+.||+|+||+||....  .+++.||+|.+...                                          
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~--~~g~~vAvK~~~~~------------------------------------------   50 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGS--FQGRPVAVKRMLID------------------------------------------   50 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEE--SSSSEEEEEEEEGG------------------------------------------
T ss_pred             heeeccCeEeeCCCeEEEEEEE--ECCeEEEEEEEcHH------------------------------------------
Confidence            3455668899999999987543  34789999987432                                          


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCC----
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF----  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l----  303 (362)
                                          ....+.+|+.+++.+ +||||+++++++.+++.+|+||||+ +++|.+++......    
T Consensus        51 --------------------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~-~gsL~~~l~~~~~~~~~~  109 (434)
T 2rio_A           51 --------------------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENL  109 (434)
T ss_dssp             --------------------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHTC-------
T ss_pred             --------------------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC-CCCHHHHHhccCCCchhh
Confidence                                113457899999876 8999999999999999999999999 57999999865432    


Q ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC-------------CcEEEEecccceecCC
Q psy14740        304 ---DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS-------------GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ---~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~-------------~~~kl~DFG~a~~~~~  358 (362)
                         ++..+..++.|++.||.|||++||+||||||+|||++.+             +.+||+|||+|+.+..
T Consensus       110 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~  180 (434)
T 2rio_A          110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS  180 (434)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC
T ss_pred             hhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCC
Confidence               223456799999999999999999999999999999754             4899999999987654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.90  E-value=1.3e-23  Score=196.51  Aligned_cols=150  Identities=23%  Similarity=0.337  Sum_probs=126.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ...+|.+.+.||+|+||.||++.+. .+++.+|+|.+....                                       
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   56 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDK---------------------------------------   56 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCH---------------------------------------
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEec-CCCcEEEEEEecCCc---------------------------------------
Confidence            4578999999999999999999855 457899999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-----------Ccceeeeeeeeeccc----eEEEEEeccCCc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-----------CDFIVKLYKTFKDKK----YLYMLMESCLGG  291 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~i~~~~~~~~~~~----~~~lv~e~~~~~  291 (362)
                                           .....+.+|+.+++.++           ||||+++++++...+    .++++||++ ++
T Consensus        57 ---------------------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~  114 (373)
T 1q8y_A           57 ---------------------VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GE  114 (373)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CE
T ss_pred             ---------------------cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CC
Confidence                                 12244677888888775           899999999987654    799999999 99


Q ss_pred             chHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcEeecCCCCcEEecC------CCcEEEEecccceecCC
Q psy14740        292 ELWTILRDK--GNFDDATTRFYTACVVEAFDYLHSR-NIIYRDLKPENLLLST------SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       292 ~L~~~l~~~--~~l~~~~~~~~~~ql~~al~~lH~~-~iiHrDikp~NIl~~~------~~~~kl~DFG~a~~~~~  358 (362)
                      +|.+++...  ..+++..+..++.|++.||.|||++ ||+||||||+|||++.      .+.+||+|||+++.+..
T Consensus       115 ~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~  190 (373)
T 1q8y_A          115 NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE  190 (373)
T ss_dssp             EHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             CHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC
Confidence            999999863  4599999999999999999999998 9999999999999953      34799999999987643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.90  E-value=2.5e-23  Score=195.54  Aligned_cols=150  Identities=27%  Similarity=0.364  Sum_probs=125.7

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.+|+|++....                                       
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---------------------------------------   91 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDR-VEQEWVAIKIIKNKK---------------------------------------   91 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSSH---------------------------------------
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEc-CCCcEEEEEEEeccH---------------------------------------
Confidence            3578999999999999999999855 457889999985431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Cc-----ceeeeeeeeeccceEEEEEeccCCcchHHHHHhc
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CD-----FIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                           .....+..|+.+++.++ |+     +|+++++++...+.+|+||||+ +++|.+++...
T Consensus        92 ---------------------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  149 (382)
T 2vx3_A           92 ---------------------AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNT  149 (382)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC-CCCHHHHHhhc
Confidence                                 12244567777777764 34     5999999999999999999999 56999998865


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHH--HCCcEeecCCCCcEEec--CCCcEEEEecccceecCC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLH--SRNIIYRDLKPENLLLS--TSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH--~~~iiHrDikp~NIl~~--~~~~~kl~DFG~a~~~~~  358 (362)
                        +.+++..++.++.|++.||.|||  +.||+||||||+|||++  .++.+||+|||+|+.+..
T Consensus       150 ~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          150 NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence              35899999999999999999999  57999999999999995  477899999999987654

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.90  E-value=2.9e-23  Score=186.81  Aligned_cols=152  Identities=16%  Similarity=0.070  Sum_probs=109.9

Q ss_pred             EEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      +.+.||+|+||.||++.+  .+++.+|+|.+..+.........                                     
T Consensus        94 ~~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~-------------------------------------  134 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKE-------------------------------------  134 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------------------------------------
T ss_pred             ecCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhh-------------------------------------
Confidence            339999999999999996  55889999998654210000000                                     


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                          .+.+....-.......+.+|+.+|+.++  | +++++++.. +..|+||||++|++|.+ +..      .....++
T Consensus       135 ----~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~  199 (282)
T 1zar_A          135 ----KRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVL  199 (282)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHH
T ss_pred             ----hhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHH
Confidence                0000000000023456889999999998  4 566665543 45699999999999988 421      2345799


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .|++.||.|||++||+||||||+|||++ ++.+||+|||+|+....+
T Consensus       200 ~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~~  245 (282)
T 1zar_A          200 DMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEE  245 (282)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETTST
T ss_pred             HHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCCC
Confidence            9999999999999999999999999999 999999999999977544

>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*

Probab=99.88  E-value=1.7e-22  Score=166.40  Aligned_cols=122  Identities=23%  Similarity=0.340  Sum_probs=112.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++++..|+..++.+.|++|++|+++||+++.+|+|++|.|+++. +.+ |++..+..++||++|||+
T Consensus        39 ~l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~-g~~~~~~~~~~G~~fGe~  115 (161)
T 3idb_B           39 ACKDILLFKNL-DPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCD-GVGRCVGNYDNRGSFGEL  115 (161)
T ss_dssp             HHTTCHHHHTS-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-EET-TEEEEEEEEESCCEECGG
T ss_pred             HHhCCHhhhcC-CHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEE-cCC-CCeEEEEEcCCCCEechH
Confidence            47889999999 999999999999999999999999999999999999999999998 555 666899999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE  132 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~  132 (362)
                      +++.+.+++++|+|.  ++|+++.|++++|.+++..+|.++.+++..
T Consensus       116 ~~~~~~~~~~~v~A~--~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~  160 (161)
T 3idb_B          116 ALMYNTPRAATITAT--SPGALWGLDRVTFRRIIVKNNAKKRKMYES  160 (161)
T ss_dssp             GGTCCCCCSSEEEES--SSEEEEEEEHHHHHHHHHHHHHTSCCC---
T ss_pred             HHHcCCCcccEEEEC--CCeEEEEEeHHHHHHHHHHCHHHHHHHHhc
Confidence            999999999999999  559999999999999999999988766543

>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}

Probab=99.88  E-value=6.2e-22  Score=160.36  Aligned_cols=129  Identities=21%  Similarity=0.333  Sum_probs=120.0

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|..+ +++++..++..++.+.|++|++|+++|++++.+|+|++|.|+++..+.+ |++..+..++||++|||
T Consensus         5 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~G~   82 (149)
T 2pqq_A            5 DVLRRNPLFAAL-DDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPD-GRENMLAVVGPSELIGE   82 (149)
T ss_dssp             GGGTSSTTTTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTT-SSEEEEEEECTTCEESG
T ss_pred             HHhhhChhhhcC-CHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCC-CcEEEEEEcCCcCEech
Confidence            468899999999 9999999999999999999999999999999999999999999998887 55588999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      .+++.+.|+.++++|.  ++|+++.|++++|..++..+|.+...+...+..+.
T Consensus        83 ~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l  133 (149)
T 2pqq_A           83 LSLFDPGPRTATGTAL--TEVKLLALGHGDLQPWLNVRPEVATALLRAVARRL  133 (149)
T ss_dssp             GGGTSCEECSSEEEES--SCEEEEEEEGGGHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcceEEEEc--cceEEEEEeHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            9999999999999999  55999999999999999999999988887766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.88  E-value=5.8e-23  Score=200.99  Aligned_cols=141  Identities=16%  Similarity=0.130  Sum_probs=106.9

Q ss_pred             EEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        154 ITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       154 ~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      .+.||+|+||.||++...   ++.+++|.........                                           
T Consensus       341 ~~~LG~G~fg~Vy~~~~~---~~~~~~k~~~~~~~~~-------------------------------------------  374 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL---DFDVIIKERVKKGYRD-------------------------------------------  374 (540)
T ss_dssp             -------CCEEEEEEECS---SCEEEEEEECCCTTSC-------------------------------------------
T ss_pred             CCEEeeCCCEEEEEEEEC---CCeEEEEEEecccccc-------------------------------------------
Confidence            457999999999999533   5678888764321100                                           


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                              +........+++.+|+++++.++||||+++..++...+..|+||||+++++|.+++..        +..++.
T Consensus       375 --------~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~  438 (540)
T 3en9_A          375 --------ERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAY  438 (540)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHH
T ss_pred             --------hhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHH
Confidence                    0111122345689999999999999999555554466667999999999999999875        568999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      |++.||.|||++||+||||||+|||++.  .+||+|||+|+.+..
T Consensus       439 qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          439 KIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             HHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             HHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            9999999999999999999999999998  999999999998754

>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}

Probab=99.87  E-value=1e-21  Score=165.96  Aligned_cols=122  Identities=18%  Similarity=0.258  Sum_probs=115.5

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++++..++..++.+.|++|++|+++|++++.+|+|++|.|+++..+.+ |++..+..++||++|||+
T Consensus        40 ~L~~~~~f~~l-~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~-g~~~~~~~~~~G~~fGe~  117 (187)
T 3gyd_A           40 IVNKIKLFGDF-SNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPN-KGIQTIAKVGAGAIIGEM  117 (187)
T ss_dssp             HHTTCCSSCCC-CHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETT-TEEEEEEEEETTCEESHH
T ss_pred             HHhcCHhhhcC-CHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCC-CCeEEEEEccCCCeeeeH
Confidence            57899999999 9999999999999999999999999999999999999999999999887 556889999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  131 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~  131 (362)
                      +++.+.|++++|+|.  ++|+++.|++++|.+++..+|.+...++.
T Consensus       118 ~~l~~~~~~~~v~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~l~~  161 (187)
T 3gyd_A          118 SMIDGMPRSASCVAS--LPTDFAVLSRDALYQLLANMPKLGNKVLI  161 (187)
T ss_dssp             HHHHCCCCSSEEEEE--EEEEEEEEEHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHhCCCCeeEEEEEC--CCeEEEEEcHHHHHHHHHHChHHHHHHHH
Confidence            999999999999999  55999999999999999999999988773

>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}

Probab=99.87  E-value=8.6e-22  Score=160.53  Aligned_cols=128  Identities=18%  Similarity=0.238  Sum_probs=115.9

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|..+ +++++..++..++.+.|++|++|+++|++++.+|+|++|.|+++..+.+ +++..+..++||++|||.
T Consensus        13 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~G~~~G~~   90 (154)
T 2z69_A           13 LLQSHHLFEPL-SPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPE-GQEKILEVTNERNTFAEA   90 (154)
T ss_dssp             HHTTSTTTTTS-CHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC------CCEEECTTEEESGG
T ss_pred             HhhcChhhcCC-CHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCC-CCEEEEEEccCCCeeccH
Confidence            47899999999 9999999999999999999999999999999999999999999988777 555789999999999999


Q ss_pred             cccCCCc-ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         86 ALQGDDL-RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        86 ~l~~~~~-r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      +++.+.+ +.++++|.  ++|+++.|++++|..++..+|.+...++..+..+.
T Consensus        91 ~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~~~~rl  141 (154)
T 2z69_A           91 MMFMDTPNYVATAQAV--VPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRL  141 (154)
T ss_dssp             GGGSSCSBCSSEEEES--SSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             hhccCCCCCceEEEEc--cceEEEEECHHHHHHHHHHChHHHHHHHHHHHHHH
Confidence            9999988 99999999  55999999999999999999999998888776543

>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E

Probab=99.87  E-value=9.6e-21  Score=198.30  Aligned_cols=118  Identities=25%  Similarity=0.358  Sum_probs=107.8

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCC-CcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNS-TEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~-~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++.+|+++ ++.++..|+.++....|++|++||+|||++++||||++|.|.|.....++ +.+..+..++||+.|||
T Consensus        43 ~Lk~~~~f~~l-~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFGE  121 (999)
T 4f7z_A           43 RLKGVKAFEKF-HPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE  121 (999)
T ss_dssp             HHTTCTTTTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEECG
T ss_pred             HHhCCHhhhcC-CHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchhh
Confidence            47889999999 99999999999999999999999999999999999999999999865442 44678999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  127 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~  127 (362)
                       +++++.||+|||+|.  ++|++|+|++++|+.++..+|+...
T Consensus       122 -all~n~pRtaTv~a~--~~s~l~~l~r~~F~~i~~~~~e~~~  161 (999)
T 4f7z_A          122 -SILDNTPRHATIVTR--ESSELLRIEQEDFKALWEKYRQYMA  161 (999)
T ss_dssp             -GGGGTCCCSSEEEES--SSEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred             -hhccCCCcceEEEec--cceEEEEEEHHHHHHHHHhChHHHH
Confidence             899999999999999  5599999999999999988876544

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.86  E-value=5.6e-22  Score=188.19  Aligned_cols=151  Identities=15%  Similarity=0.056  Sum_probs=110.9

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ..|...+.||+|+||.||++.+. .+++.+|+|++....                                         
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~~~~~~-----------------------------------------  115 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTE-----------------------------------------  115 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEECCSC-----------------------------------------
T ss_pred             eeEEEecccccCCCEEEEEEEec-CCCCceEEEEEecCC-----------------------------------------
Confidence            45788899999999999999965 458899999876331                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cce---------------------eeeeeeeec-----cceE
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFI---------------------VKLYKTFKD-----KKYL  281 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i---------------------~~~~~~~~~-----~~~~  281 (362)
                                     .......+.+.+|+.+++.+.| +|.                     ..+...+..     ...+
T Consensus       116 ---------------~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (413)
T 3dzo_A          116 ---------------RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSR  180 (413)
T ss_dssp             ---------------C----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSE
T ss_pred             ---------------CccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccce
Confidence                           1111223557778888887765 211                     111111111     1236


Q ss_pred             EEEEeccCCcchHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        282 YMLMESCLGGELWTILRD-------KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       282 ~lv~e~~~~~~L~~~l~~-------~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      +++|+++ +++|.+++..       ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       181 ~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~  259 (413)
T 3dzo_A          181 FFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV  259 (413)
T ss_dssp             EEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecccee
Confidence            7888876 8999998852       2237788889999999999999999999999999999999999999999999998


Q ss_pred             ecC
Q psy14740        355 KLI  357 (362)
Q Consensus       355 ~~~  357 (362)
                      ...
T Consensus       260 ~~~  262 (413)
T 3dzo_A          260 RDG  262 (413)
T ss_dssp             ETT
T ss_pred             ecC
Confidence            653

>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}

Probab=99.86  E-value=3.2e-21  Score=166.37  Aligned_cols=126  Identities=24%  Similarity=0.378  Sum_probs=115.5

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA   86 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~   86 (362)
                      |+++|+|+++ +++++..++..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++..+..++||++|||.+
T Consensus         1 L~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~G~~~   78 (216)
T 4ev0_A            1 MKGSPLFHGL-APEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLG-GQERTLALLGPGELFGEMS   78 (216)
T ss_dssp             ---CGGGTTC-CHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSS-SCEEEEEEECTTCEECHHH
T ss_pred             CCCChhhcCC-CHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCC-CCEEEEEEecCCCEEeehh
Confidence            5789999999 9999999999999999999999999999999999999999999999888 5558999999999999999


Q ss_pred             ccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         87 LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        87 l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      ++.+.|++++++|.  ++|+++.|++++|..++..+|.+...+...+..+
T Consensus        79 ~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  126 (216)
T 4ev0_A           79 LLDEGERSASAVAV--EDTELLALFREDYLALIRRLPLVAHNLAALLARR  126 (216)
T ss_dssp             HHHCCBCSSEEEES--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hcCCCCcceEEEEc--CCEEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHH
Confidence            99999999999999  5599999999999999999999998877666544

>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}

Probab=99.86  E-value=2.7e-21  Score=164.04  Aligned_cols=129  Identities=12%  Similarity=0.124  Sum_probs=117.7

Q ss_pred             cccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeee
Q psy14740          4 NPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFG   83 (362)
Q Consensus         4 ~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fG   83 (362)
                      ..-++.+|+|.++ ++++++.++..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++.++..++||++||
T Consensus         6 ~~l~~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~-G~e~~~~~~~~g~~~g   83 (194)
T 3dn7_A            6 TALINHIRKFIFL-TDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEK-GIEQTTQFAIENWWLS   83 (194)
T ss_dssp             HHHHHHHHTTSCC-CHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTT-SCEEEEEEEETTCEEC
T ss_pred             HHHHHHHHHhCCC-CHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCC-CCEEEEEEccCCcEEe
Confidence            3456889999999 9999999999999999999999999999999999999999999999888 5568899999999999


Q ss_pred             cc-cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         84 EK-ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        84 E~-~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      |+ +++.+.|++++++|+  ++|+++.|++++|.+++..+|.+...+...+..+
T Consensus        84 e~~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~  135 (194)
T 3dn7_A           84 DYMAFQKQQPADFYIQSV--ENCELLSITYTEQENLFERIPALERYFRLVYQKS  135 (194)
T ss_dssp             CHHHHHHTCBCSSEEEES--SCEEEEEEEHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred             ehHHHhcCCCCceEEEEE--CCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            98 678999999999999  5699999999999999999999988776655443

>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}

Probab=99.86  E-value=3e-21  Score=168.41  Aligned_cols=132  Identities=17%  Similarity=0.331  Sum_probs=120.4

Q ss_pred             CCcccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCe
Q psy14740          2 SKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF   81 (362)
Q Consensus         2 ~~~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~   81 (362)
                      .....|+++|+|.++ +++++..++..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++.++..++||++
T Consensus         3 ~~~~~L~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~   80 (231)
T 3e97_A            3 GRLDDLKRSPLFQNV-PEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLG-GRERVLGDIYAPGV   80 (231)
T ss_dssp             CCHHHHHTSGGGTTC-CHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC---CEEEEEEEESSEE
T ss_pred             hHHHHHhcChhhccC-CHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCC-CceEEEEecCCCCE
Confidence            344578999999999 9999999999999999999999999999999999999999999999888 55588999999999


Q ss_pred             eecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         82 FGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        82 fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      |||.+++.+.|++++++|.  ++|+++.|+++.|..++..+|.+...++..+..+.
T Consensus        81 ~G~~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l  134 (231)
T 3e97_A           81 VGETAVLAHQERSASVRAL--TPVRTLMLHREHFELILRRHPRVLWNLAEMLARRV  134 (231)
T ss_dssp             ESTTTTTCCCCCCEEEEES--SCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             EeeHHHhCCCCceEEEEEC--CcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence            9999999999999999999  55999999999999999999999988887766543

>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2

Probab=99.86  E-value=9.2e-21  Score=165.57  Aligned_cols=129  Identities=18%  Similarity=0.182  Sum_probs=119.7

Q ss_pred             ccccccccccccCCHHHHHHHHhh--cceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYF--SSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~--~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      ..|+++|+|..+ ++++++.|+..  ++.+.|++|++|+++||+++.+|+|++|.|+++..+.+ |++..+..++||++|
T Consensus        18 ~~l~~~~lf~~l-~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~-G~~~~l~~~~~G~~f   95 (232)
T 1zyb_A           18 DTLLQLPLFQGL-CHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKE-NIYTVIEQIEAPYLI   95 (232)
T ss_dssp             TTGGGSGGGTTC-CHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGG-GSCEEEEEEESSEEE
T ss_pred             HHHhcCccccCC-CHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCC-CCEEEEEEccCCCee
Confidence            468999999999 99999999998  99999999999999999999999999999999998887 555899999999999


Q ss_pred             ecccccCCCc-ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         83 GEKALQGDDL-RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        83 GE~~l~~~~~-r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      ||.+++.+.+ ++++++|.  ++|+++.|++++|..++..+|.+...++..+..+.
T Consensus        96 G~~~~~~~~~~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l  149 (232)
T 1zyb_A           96 EPQSLFGMNTNYASSYVAH--TEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRA  149 (232)
T ss_dssp             CGGGGSSSCCBCSSEEEES--SCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHH
T ss_pred             eehHHhCCCCCCceEEEEc--cceEEEEEEHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence            9999999988 99999999  56999999999999999999999998887766543

>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*

Probab=99.85  E-value=2.5e-21  Score=155.23  Aligned_cols=115  Identities=24%  Similarity=0.335  Sum_probs=100.7

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++++..|+..++.+.|++|++|+++|++++.+|+|++|.|++..   + +  ..+..+++|++|||+
T Consensus        24 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~-g--~~~~~~~~G~~fGe~   96 (139)
T 3ocp_A           24 AILDNDFMKNL-ELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---E-G--VKLCTMGPGKVFGEL   96 (139)
T ss_dssp             HHHHCTTTTTS-CHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE---T-T--EEEEEECTTCEESCH
T ss_pred             HHhcCHhhhcC-CHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE---C-C--EEEEEeCCCCEeccH
Confidence            46789999999 999999999999999999999999999999999999999999964   2 2  578999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  129 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~  129 (362)
                      +++.+.+++++++|.  ++|+++.|++++|.+++..+|.++++.
T Consensus        97 ~~l~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~r~~  138 (139)
T 3ocp_A           97 AILYNCTRTATVKTL--VNVKLWAIDRQCFQTIMMRTGLIKHTE  138 (139)
T ss_dssp             HHHHCCCCSSEEEES--SCEEEEEEEHHHHHHHHTC--------
T ss_pred             HHHCCCCcceEEEEC--cceEEEEEcHHHHHHHHhhChHhhhhc
Confidence            999999999999999  559999999999999999999987653

>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*

Probab=99.85  E-value=4.5e-21  Score=166.81  Aligned_cols=128  Identities=21%  Similarity=0.365  Sum_probs=119.3

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|.++ +++++..++..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++..+..++||++|||
T Consensus         6 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~G~~~G~   83 (227)
T 3d0s_A            6 EILARAGIFQGV-EPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPD-GRENLLTIMGPSDMFGE   83 (227)
T ss_dssp             HHHTTSSTTSSC-CSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTT-SCEEEEEEECTTCEESC
T ss_pred             HHHhcChhhcCC-CHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCC-CcEEEEEEecCCCEEee
Confidence            368999999999 9999999999999999999999999999999999999999999999888 55588999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.|++++++|.  ++|+++.|++++|..++..+|.+...++..+..+
T Consensus        84 ~~~~~~~~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  133 (227)
T 3d0s_A           84 LSIFDPGPRTSSATTI--TEVRAVSMDRDALRSWIADRPEISEQLLRVLARR  133 (227)
T ss_dssp             HHHHSCSCCSSEEEES--SCEEEEEEEHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCceeEEEEc--ccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence            9999999999999999  5599999999999999999999998887766544

>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*

Probab=99.85  E-value=1e-20  Score=165.66  Aligned_cols=128  Identities=16%  Similarity=0.193  Sum_probs=119.6

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|.++ +++++..|+..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++..+..++||++|||
T Consensus        11 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~G~~~G~   88 (237)
T 3fx3_A           11 AIARNSLLIRSL-PEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPT-GSEAVVSVFTRGESFGE   88 (237)
T ss_dssp             HHHTTSHHHHTS-CHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTT-SCEEEEEEEETTEEECH
T ss_pred             HHHhCCHhhccC-CHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCC-CCEEEEEEeCCCCEech
Confidence            458999999999 9999999999999999999999999999999999999999999998888 55689999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.|++++++|.  ++|+++.|++++|..++..+|.+...++..+..+
T Consensus        89 ~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  138 (237)
T 3fx3_A           89 AVALRNTPYPVSAEAV--TPCEVMHIPSPVFVSLMRRDPEICISILATTFGH  138 (237)
T ss_dssp             HHHHHTCCCSSEEEES--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCceEEEC--CceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            9999999999999999  5599999999999999999999998887766654

>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}

Probab=99.85  E-value=8.2e-21  Score=155.79  Aligned_cols=119  Identities=18%  Similarity=0.286  Sum_probs=110.9

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|+++ +++++..++..++.+.|++|++|+++|++++.+|+|.+|.|+++.      .+..+..++||++|||.
T Consensus        28 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~------~~~~~~~~~~G~~fG~~  100 (160)
T 4f8a_A           28 VFKEHPAFRLA-SDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ------DDEVVAILGKGDVFGDV  100 (160)
T ss_dssp             HHTTCGGGTTC-CHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEE------TTEEEEEEETTCEEECC
T ss_pred             HHHhCHhhhhC-CHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE------CCEEEEEecCCCEeCcH
Confidence            57889999999 999999999999999999999999999999999999999999985      23689999999999999


Q ss_pred             cccCC--CcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhh
Q psy14740         86 ALQGD--DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  133 (362)
Q Consensus        86 ~l~~~--~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~  133 (362)
                      +++.+  .+++++++|.  ++|+++.|++++|.+++..+|.+...+++.+
T Consensus       101 ~~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l  148 (160)
T 4f8a_A          101 FWKEATLAQSCANVRAL--TYCDLHVIKRDALQKVLEFYTAFSHSFSRNL  148 (160)
T ss_dssp             TTTCSSCCBCSSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHC
T ss_pred             HHhcCcccceEEEEEEC--CceEEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988  7999999999  5599999999999999999999998877665

>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}

Probab=99.85  E-value=2.6e-20  Score=161.09  Aligned_cols=128  Identities=12%  Similarity=0.125  Sum_probs=118.1

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCe--e
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDF--F   82 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~--f   82 (362)
                      ..|+++|+|.++ ++++++.++..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++..+..++||++  |
T Consensus         3 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~G~~~~~   80 (220)
T 3dv8_A            3 SFENYFPLWNDL-NTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDE-GREITLYRLFDMDMCLL   80 (220)
T ss_dssp             --CCSCGGGGTS-CHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTT-SCEEEEEEECTTCEESG
T ss_pred             chHHhChhhhcC-CHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCC-CCEEEEEecCCCCeeeh
Confidence            468999999999 9999999999999999999999999999999999999999999999888 55589999999999  8


Q ss_pred             ecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         83 GEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        83 GE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      ||.+++.+.|++++++|.  ++|+++.|++++|..++..+|.+...+...+..+
T Consensus        81 g~~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  132 (220)
T 3dv8_A           81 SASCIMRSIQFEVTIEAE--KDTDLWIIPAEIYKGIMKDSAPVANYTNELMATR  132 (220)
T ss_dssp             GGGGGCTTCCCCCEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hHHHHhCCCCCceEEEEe--eeeEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            999999999999999999  5599999999999999999999998877666544

>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}

Probab=99.84  E-value=9.2e-21  Score=161.48  Aligned_cols=122  Identities=21%  Similarity=0.427  Sum_probs=112.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++.+..|+..++.+.|++|++|+++||+++.+|+|.+|.|++..  .+ |.  .+..+++|++|||.
T Consensus        72 ~l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~--~~-g~--~~~~l~~G~~fGe~  145 (198)
T 2ptm_A           72 LVASVPFFVGA-DSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM--SD-GV--IATSLSDGSYFGEI  145 (198)
T ss_dssp             HHHHCGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEEEEC--TT-SC--EEEEECTTCEESCH
T ss_pred             HHhcCcchhcC-CHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe--cC-Ce--EEEEecCCCEechH
Confidence            46789999999 999999999999999999999999999999999999999999986  33 33  78999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      +++.+.|++++|+|.  ++|+++.|++++|..++..+|.+...+...+..
T Consensus       146 ~~~~~~~~~~~~~a~--~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~  193 (198)
T 2ptm_A          146 CLLTRERRVASVKCE--TYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVR  193 (198)
T ss_dssp             HHHHSSCCSSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred             HHcCCCccceEEEEe--eEEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence            999999999999999  559999999999999999999999887766543

>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}

Probab=99.84  E-value=3.4e-20  Score=161.45  Aligned_cols=128  Identities=19%  Similarity=0.245  Sum_probs=109.0

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+..++|.+| ++++++.++..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++.++..++||++|||
T Consensus        11 ~~lr~~~lf~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~g~~~G~   88 (230)
T 3iwz_A           11 TTVRNATPSLTL-DAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDD-DRELVLGYFGSGEFVGE   88 (230)
T ss_dssp             -----------C-CHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTT-SCEEEEEEECTTCEESC
T ss_pred             hhhhhcchhccC-CHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCC-CCEEEEEEecCCCEEEe
Confidence            468999999999 9999999999999999999999999999999999999999999999888 55689999999999999


Q ss_pred             ccccCCC-cceeeEEecCCCCeEEEEEehhhHHHHhhch-----HHHHHhhhhhhhHH
Q psy14740         85 KALQGDD-LRTANIVAADPEGVSCLVIDQETFNQLISSL-----DEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~-~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~-----p~~~~~~~~~~~~~  136 (362)
                      .+++.+. |++++++|.  ++|+++.|++++|..++..+     |.+...++..+..+
T Consensus        89 ~~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~  144 (230)
T 3iwz_A           89 MGLFIESDTREVILRTR--TQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKR  144 (230)
T ss_dssp             GGGTSCCSBCCSEEEES--SCEEEEEEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhcCCCCceeEEEEc--CcEEEEEEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHH
Confidence            9999874 899999999  55999999999999999999     99998887776654

>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2

Probab=99.84  E-value=1.5e-21  Score=155.99  Aligned_cols=121  Identities=16%  Similarity=0.311  Sum_probs=106.5

Q ss_pred             CCcccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEE--EecCC
Q psy14740          2 SKNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIR--TLYKG   79 (362)
Q Consensus         2 ~~~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~--~l~~G   79 (362)
                      +....|+++|+|+.+ +++++..|+..++.+.|++|++|+++||+++.+|+|++|.|++. .+.+ +++..+.  .++||
T Consensus         3 ~~~~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~-~~~~-g~~~~~~~~~l~~G   79 (137)
T 1wgp_A            3 SGSSGVRRVPLFENM-DERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESV-TTDG-GRSGFYNRSLLKEG   79 (137)
T ss_dssp             CCSCSCSSCSGGGSC-CHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEE-CCSS-CSSSSSCEEECCTT
T ss_pred             chHHHHHcCcchhhC-CHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-EcCC-CcceeeeeeeecCC
Confidence            445679999999999 99999999999999999999999999999999999999999965 5555 4444555  99999


Q ss_pred             Ceeecccc---cCCCc------ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHH
Q psy14740         80 DFFGEKAL---QGDDL------RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  127 (362)
Q Consensus        80 ~~fGE~~l---~~~~~------r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~  127 (362)
                      ++|||+++   +.+.|      ++++|+|.  ++|+++.|++++|.+++.++|.++.
T Consensus        80 ~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~--~~~~~~~i~~~~~~~l~~~~p~l~~  134 (137)
T 1wgp_A           80 DFCGDELLTWALDPKSGSNLPSSTRTVKAL--TEVEAFALIADELKFVASQFRRSGP  134 (137)
T ss_dssp             CBSSTHHHHHHHCSSCCSSSCBCSSEEEES--SCBEEEEEEHHHHHHHHHHHCCCTT
T ss_pred             CEecHHHHHHHhccccccccccceeEEEEe--EEEEEEEECHHHHHHHHHHCHhhHh
Confidence            99999995   77774      68999999  5599999999999999999988754

>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B

Probab=99.84  E-value=3.2e-20  Score=159.84  Aligned_cols=121  Identities=21%  Similarity=0.384  Sum_probs=112.0

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|.++|+|.++ +++.+..|+..++.+.|++|++|+++||+++.+|+|.+|.|++..   +   +..+..++||++|||.
T Consensus        76 ~l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~---~~~~~~l~~G~~fGe~  148 (212)
T 3ukn_A           76 ELLQLPLFESA-SRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK---D---NTVLAILGKGDLIGSD  148 (212)
T ss_dssp             GGGGSGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEES---S---SCEEEEECTTCEEECS
T ss_pred             HHHhcHHhhcC-CHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEEE---C---CeEEEEecCCCCcCcH
Confidence            45689999999 999999999999999999999999999999999999999999984   2   2679999999999999


Q ss_pred             cccCCC--cceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         86 ALQGDD--LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        86 ~l~~~~--~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      +++.+.  +++++|+|.  ++|+++.|++++|..++..+|.+...++..+..
T Consensus       149 ~~~~~~~~~~~~~v~a~--~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~  198 (212)
T 3ukn_A          149 SLTKEQVIKTNANVKAL--TYCDLQYISLKGLREVLRLYPEYAQKFVSEIQH  198 (212)
T ss_dssp             CCSSSSCCBBCSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             HhccCCCCCcceEEEEc--ccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHH
Confidence            999998  999999999  559999999999999999999999988877654

>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*

Probab=99.84  E-value=9.6e-21  Score=154.67  Aligned_cols=115  Identities=24%  Similarity=0.413  Sum_probs=105.2

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++++..|+..++.+.|++|++|+++|++++.+|+|++|.|+++.   + +  ..+..+++|++|||.
T Consensus        39 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~-~--~~~~~~~~G~~fGe~  111 (154)
T 3pna_A           39 AIEKNVLFSHL-DDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---N-N--EWATSVGEGGSFGEL  111 (154)
T ss_dssp             HHHHCGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE---T-T--EEEEEECTTCEECCH
T ss_pred             HHHhChhhhhC-CHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE---C-C--EEEEEecCCCEeeeh
Confidence            47889999999 999999999999999999999999999999999999999999996   2 2  468899999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  129 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~  129 (362)
                      +++.+.+++++++|.  ++|+++.|++++|.+++..+|.+++++
T Consensus       112 ~~~~~~~~~~~v~A~--~~~~~~~i~~~~~~~ll~~~~~~~~~~  153 (154)
T 3pna_A          112 ALIYGTPRAATVKAK--TNVKLWGIDRDSYRRILMGSTLRKRKM  153 (154)
T ss_dssp             HHHHCCCCSSEEEES--SCEEEEEEEHHHHHHHTHHHHHHC---
T ss_pred             HhhcCCCcceEEEEC--cceEEEEEeHHHHHHHHHhChHHHhhc
Confidence            999999999999999  559999999999999999999987654

>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A

Probab=99.84  E-value=1.2e-20  Score=151.00  Aligned_cols=121  Identities=31%  Similarity=0.403  Sum_probs=110.9

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|.++ +++++..|+..++.+.|++|++|+++|++++.+|+|.+|.|+++..+        ...++||++|||
T Consensus        11 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~--------~~~~~~G~~~G~   81 (138)
T 1vp6_A           11 QLVAAVPLFQKL-GPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--------PVELGPGAFFGE   81 (138)
T ss_dssp             HHHTTCGGGGGC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS--------CEEECTTCEECH
T ss_pred             HHHHhChhhhcC-CHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC--------cceECCCCEeee
Confidence            357899999999 99999999999999999999999999999999999999999997443        247899999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.+++++++|.  ++|+++.|++++|..++..+|.+...+...+..+
T Consensus        82 ~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~r  131 (138)
T 1vp6_A           82 MALISGEPRSATVSAA--TTVSLLSLHSADFQMLCSSSPEIAEIFRKTALER  131 (138)
T ss_dssp             HHHHHCCCCSSCEEES--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hHhccCCCceeEEEEC--CCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHh
Confidence            9999999999999999  5599999999999999999999998888776654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.83  E-value=8.5e-21  Score=168.56  Aligned_cols=164  Identities=16%  Similarity=0.098  Sum_probs=110.0

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCc--eeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRS--FALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      |.+...||+|+||.||++.+. .+++.  +|+|++......                           |..        .
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~-~~g~~~~vAvK~~~~~~~~---------------------------~~~--------~   92 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGV-FDGKPVAMAVKIYRIETSE---------------------------FDK--------M   92 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCC------------------------------------------
T ss_pred             hhhCCEEeecceEEEEEEEEc-CCCcEeeEEEEEEECCccc---------------------------hhh--------H
Confidence            678899999999999999863 23677  999987553110                           000        0


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcce--eeeeeeeeccceEEEEEeccCC-c----chHHHHHhcC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFI--VKLYKTFKDKKYLYMLMESCLG-G----ELWTILRDKG  301 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~  301 (362)
                      .++......-..............+.+|+.+|..+.|+++  +.++..    +..++||||+.+ |    +|.+....  
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--  166 (258)
T 1zth_A           93 DEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--  166 (258)
T ss_dssp             GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--
T ss_pred             HHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--
Confidence            0000000000000000011123457889999999988764  334432    356899999932 3    67665432  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH-HCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLH-SRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH-~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                       .++..+..++.|++.+|.||| ++||+||||||+|||++.  .++|+|||+|.....+
T Consensus       167 -~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~  222 (258)
T 1zth_A          167 -LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHP  222 (258)
T ss_dssp             -GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred             -cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence             345567889999999999999 999999999999999988  9999999999887654

>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}

Probab=99.83  E-value=6.4e-21  Score=165.75  Aligned_cols=128  Identities=18%  Similarity=0.243  Sum_probs=118.5

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|.++ ++++++.++..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++..+..++||++|||
T Consensus         9 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~g~~~G~   86 (227)
T 3dkw_A            9 QLLQSHHLFEPL-SPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPE-GQEKILEVTNERNTFAE   86 (227)
T ss_dssp             HHHTTSTTTSSS-CHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGG-GCCBCCCEECTTEEESC
T ss_pred             HHHhcChhhcCC-CHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCC-CCEEEEEEcCCCCEeee
Confidence            358999999999 9999999999999999999999999999999999999999999988887 55578999999999999


Q ss_pred             ccccCCCc-ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDL-RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~-r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.| ++++++|.  ++|+++.|++++|..++..+|.+...++..+..+
T Consensus        87 ~~~~~~~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  137 (227)
T 3dkw_A           87 AMMFMDTPNYVATAQAV--VPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTR  137 (227)
T ss_dssp             TTTTTTCSBCSSCEEES--SCCEEEEEESHHHHHHHSSCTHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCceEEEEc--CcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            99999999 99999999  5599999999999999999999998877766544

>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2

Probab=99.83  E-value=2.8e-20  Score=162.37  Aligned_cols=126  Identities=17%  Similarity=0.228  Sum_probs=112.8

Q ss_pred             cccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccc
Q psy14740          8 KLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKAL   87 (362)
Q Consensus         8 ~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l   87 (362)
                      ..+|+|..+ ++++++.|+..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++.++..++||++|||.++
T Consensus        13 ~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~-g~~~~~~~~~~G~~~G~~~~   90 (232)
T 2gau_A           13 LLRDVWSLL-NEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVY-GRFHISRIVKPGQFFGMRPY   90 (232)
T ss_dssp             GSHHHHTTC-CHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC------CCCEEEEECTTCEESHHHH
T ss_pred             cccHhhhcC-CHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCC-CCEEEEEEeCCCCEeeeehh
Confidence            468999999 9999999999999999999999999999999999999999999988877 55588999999999999999


Q ss_pred             cCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         88 QGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        88 ~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      +.+.|++++++|.  ++|+++.|++++|..++..+|.+...++..+..+.
T Consensus        91 ~~~~~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l  138 (232)
T 2gau_A           91 FAEETCSSTAIAV--ENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKEL  138 (232)
T ss_dssp             HHTSCCSSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             hCCCCcceEEEEe--cceEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence            9999999999999  55999999999999999999999988877765543

>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*

Probab=99.83  E-value=2.9e-20  Score=171.29  Aligned_cols=126  Identities=18%  Similarity=0.269  Sum_probs=117.2

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      ..|+++|+|++| +++++..|+..++.+.|++|++||++||+++.+|+|.+|.|++++.+.+| ++ .+..++||++|||
T Consensus        13 ~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g-~~-~~~~~~~G~~fGe   89 (333)
T 4ava_A           13 EDLAGMDVFQGC-PAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDG-VA-IIARALPGMIVGE   89 (333)
T ss_dssp             HHHTTSGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTC-CE-EEEEECTTCEESH
T ss_pred             HHHhCCHhHhcC-CHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCC-cE-EEEEecCCCEeeH
Confidence            357899999999 99999999999999999999999999999999999999999999998874 43 8999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      ++++.+.||+++|+|+  ++|+++.|++++|.+++ ++|.+...++..+..+
T Consensus        90 ~~l~~~~~~~~~v~A~--~~~~~~~i~~~~~~~l~-~~p~~~~~~~~~~~~~  138 (333)
T 4ava_A           90 IALLRDSPRSATVTTI--EPLTGWTGGRGAFATMV-HIPGVGERLLRTARQR  138 (333)
T ss_dssp             HHHHHTCBCSSEEEES--SCEEEEEECHHHHHHHH-HSTTHHHHHHHHHHHH
T ss_pred             HHhcCCCCceEEEEEe--cCEEEEEEcHHHHHHHH-hChHHHHHHHHHHHHH
Confidence            9999999999999999  55999999999999999 8999999888776654

>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2

Probab=99.83  E-value=1.2e-19  Score=175.05  Aligned_cols=117  Identities=26%  Similarity=0.342  Sum_probs=109.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCc-ceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE-EKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~-~~~~~~l~~G~~fGE   84 (362)
                      .|+++++|.++ +++++..|+..+..+.|++|++||++||+++.+|+|++|.|+++..+.+|.+ +..+..++||++|||
T Consensus        43 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe  121 (469)
T 1o7f_A           43 RLKGVKAFEKF-HPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE  121 (469)
T ss_dssp             HHTTCTTTTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred             HHhCCHhhhcC-CHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence            47889999999 9999999999999999999999999999999999999999999998888542 588999999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  126 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~  126 (362)
                      ++ +.+.|++++|+|.  ++|++|.|++++|..++..+|.+.
T Consensus       122 ~~-l~~~~~~~tv~A~--~~~~l~~i~~~~~~~l~~~~p~~~  160 (469)
T 1o7f_A          122 SI-LDNTPRHATIVTR--ESSELLRIEQEDFKALWEKYRQYM  160 (469)
T ss_dssp             GG-GGTCBCSSEEEES--SSEEEEEEEHHHHHHHHHHHGGGT
T ss_pred             hh-hCCCCccceEEEc--cceeEEEEcHHHHHHHHHhCHHHH
Confidence            99 9999999999999  569999999999999998888744

>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}

Probab=99.82  E-value=2.7e-20  Score=168.87  Aligned_cols=134  Identities=48%  Similarity=0.808  Sum_probs=122.3

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+..|+|..+ +++++..++..+..+.|++|++|+++||+++.+|+|.+|.|+++......+++..+..+++|++|||+
T Consensus       158 ~l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~  236 (299)
T 3shr_A          158 FLKSVPTFQSL-PEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEK  236 (299)
T ss_dssp             HHTTSHHHHHS-CHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGG
T ss_pred             HHhhCHHhhhC-CHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChH
Confidence            46788999999 99999999999999999999999999999999999999999999987333666899999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhhhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRLNEE  142 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~  142 (362)
                      +++.+.||+++|+|.  ++|+++.|++++|.+++..+|.+..++++.+..+....+.
T Consensus       237 ~ll~~~~~~~tv~a~--~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~r~~~~~~  291 (299)
T 3shr_A          237 ALQGEDVRTANVIAA--EAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAE  291 (299)
T ss_dssp             GGSSSEECSSEEEES--SSEEEEEEEHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCcceEEEEC--CCEEEEEEeHHHHHHHHccHHHHHHHHHHHHhhhhhcchh
Confidence            999999999999999  6699999999999999999999999888888776555543

>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*

Probab=99.82  E-value=1.3e-19  Score=163.64  Aligned_cols=126  Identities=25%  Similarity=0.411  Sum_probs=117.1

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA   86 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~   86 (362)
                      ++++++|..+ +++++..++..++.+.|++|++|+++||+++.+|+|.+|.|++.+...+|++...+..++||++|||++
T Consensus       159 l~~~~lf~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~~  237 (291)
T 2qcs_B          159 LSKVSILESL-DKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIA  237 (291)
T ss_dssp             HHTCGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSGG
T ss_pred             HhhchHhhhC-CHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHHH
Confidence            5678999999 999999999999999999999999999999999999999999998887766678899999999999999


Q ss_pred             ccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         87 LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        87 l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      ++.+.||++||+|.  ++|+++.|++++|.+++..+|.+..+.+..+..
T Consensus       238 ll~~~~~~~tv~a~--~~~~~~~i~~~~f~~~l~~~p~~~~~~~~~~~~  284 (291)
T 2qcs_B          238 LLMNRPKAATVVAR--GPLKCVKLDRPRFERVLGPCSDILKRNIQQYNS  284 (291)
T ss_dssp             GTCCCCCSSEEEEE--EEEEEEEEEHHHHHHHHCCHHHHHTTSHHHHHH
T ss_pred             HcCCCCcceEEEEC--CcEEEEEEcHHHHHHHhccHHHHHHHHHHHHHH
Confidence            99999999999999  559999999999999999999998887766554

>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*

Probab=99.82  E-value=5.1e-20  Score=157.36  Aligned_cols=122  Identities=23%  Similarity=0.410  Sum_probs=109.9

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|.++ +++.+..|+..++.+.|++|++|+++||+++.+|+|.+|.|++..  .+ +.+.   ++++|++|||.
T Consensus        73 ~l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~--~~-g~~~---~l~~G~~fGe~  145 (202)
T 3bpz_A           73 LVASMPLFANA-DPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLT--KG-NKEM---KLSDGSYFGEI  145 (202)
T ss_dssp             HHHTCHHHHTS-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEC--TT-SCCE---EEETTCEECHH
T ss_pred             HHhcCCchhcC-CHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEEEEE--CC-CeEE---EEcCCCEeccH
Confidence            47789999999 999999999999999999999999999999999999999999974  33 3332   68999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +++.+.|++++|+|.  ++|+++.|++++|..++..+|.+...+...+..+
T Consensus       146 ~~~~~~~~~~~v~a~--~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~r  194 (202)
T 3bpz_A          146 CLLTRGRRTASVRAD--TYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDR  194 (202)
T ss_dssp             HHHHCSBCSSEEEES--SCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHHH
T ss_pred             HHhcCCCcccEEEEe--eEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            999999999999999  5599999999999999999999988777665543

>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...

Probab=99.81  E-value=2.3e-19  Score=153.94  Aligned_cols=122  Identities=24%  Similarity=0.313  Sum_probs=109.2

Q ss_pred             ccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCC
Q psy14740         11 AYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD   90 (362)
Q Consensus        11 ~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~   90 (362)
                      +++..+ ++++++.++..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++..+..++||++|||.+++.+
T Consensus         2 ~l~~~l-~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~G~~~~~~~   79 (210)
T 3ryp_A            2 VLGKPQ-TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEE-GKEMILSYLNQGDFIGELGLFEE   79 (210)
T ss_dssp             -----C-CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTT-CCEEEEEEEETTCEESCTTTTST
T ss_pred             cCCCcC-CHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCC-CCEEEEEEcCCCCEeeeHHHhcC
Confidence            456667 9999999999999999999999999999999999999999999999888 55689999999999999999998


Q ss_pred             C-cceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         91 D-LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        91 ~-~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      . |++++++|.  ++|+++.|+++.|..++..+|.+...++..+..+
T Consensus        80 ~~~~~~~~~a~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  124 (210)
T 3ryp_A           80 GQERSAWVRAK--TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR  124 (210)
T ss_dssp             TCBCSSEEEES--SCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEC--CcEEEEEEcHHHHHHHHHHChHHHHHHHHHHHHH
Confidence            7 899999999  5599999999999999999999998887766554

>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2

Probab=99.81  E-value=4.8e-19  Score=151.56  Aligned_cols=117  Identities=26%  Similarity=0.342  Sum_probs=106.9

Q ss_pred             CCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCC----c
Q psy14740         17 VNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD----L   92 (362)
Q Consensus        17 ~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~----~   92 (362)
                      |++++++.|+..++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+ |++..+..++||++|||.+++.+.    |
T Consensus         1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~g~~~G~~~~~~~~~~~~~   79 (207)
T 2oz6_A            1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDD-GREMIIGYLNSGDFFGELGLFEKEGSEQE   79 (207)
T ss_dssp             CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTT-SCEEEEEEEETTCEESCTTTCC-----CB
T ss_pred             CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCC-CCEEEEEEcCCCCCcccHHHhcCCCCCCC
Confidence            48999999999999999999999999999999999999999999999888 555899999999999999999988    8


Q ss_pred             ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        93 r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      ++++++|.  ++|+++.|++++|..++..+|.+...++..+..+
T Consensus        80 ~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  121 (207)
T 2oz6_A           80 RSAWVRAK--VECEVAEISYAKFRELSQQDSEILYTLGSQMADR  121 (207)
T ss_dssp             CCSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cceEEEEC--CcEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            99999999  5599999999999999999999998887766544

>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}

Probab=99.80  E-value=7.5e-20  Score=171.54  Aligned_cols=129  Identities=25%  Similarity=0.384  Sum_probs=119.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .++++++|..+ +++++..|+..+..+.|++|++|+++|++++.+|||.+|.|++++...+|++...+..+++|++|||+
T Consensus       249 ~L~~v~~f~~L-s~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~  327 (381)
T 4din_B          249 FLSKVSILESL-EKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEI  327 (381)
T ss_dssp             HHHHCSTTTTC-CTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTT
T ss_pred             HhhhhHHHHhc-cHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechH
Confidence            35778999999 99999999999999999999999999999999999999999999988776767789999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      +++.+.||++||+|.  ++|+++.|++++|.+++..+|++..+.+..+....
T Consensus       328 all~~~~r~~tv~A~--~~~~ll~i~~~~f~~ll~~~~~i~~~~~~~~~~~l  377 (381)
T 4din_B          328 ALLLNRPRAATVVAR--GPLKCVKLDRPRFERVLGPCSEILKRNIQRYNSFI  377 (381)
T ss_dssp             GGGSCCBCSSEEEES--SCBEEEEEEHHHHHHHHCCHHHHHHTTHHHHHHHH
T ss_pred             HHhCCCCceeEEEEc--CCEEEEEEeHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            999999999999999  55999999999999999999999988877665543

>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}

Probab=99.79  E-value=1.3e-18  Score=154.65  Aligned_cols=119  Identities=24%  Similarity=0.335  Sum_probs=107.4

Q ss_pred             cccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCC-c
Q psy14740         14 VHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD-L   92 (362)
Q Consensus        14 ~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~-~   92 (362)
                      ..+ ++++++.|+..++.+.|++|++|+++|++++.+|+|++|.|+++..+.+ |++.++..++||++|||.+++.+. |
T Consensus        55 ~~l-~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~-G~e~~~~~~~~G~~~Ge~~~~~~~~~  132 (260)
T 3kcc_A           55 KPQ-TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEE-GKEMILSYLNQGDFIGELGLFEEGQE  132 (260)
T ss_dssp             -----CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTT-CCEEEEEEEETTCEESCTTTTSTTCB
T ss_pred             CCC-CHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCC-CCEEEEEEcCCCCEEeehHHhCCCCC
Confidence            556 9999999999999999999999999999999999999999999999888 555899999999999999999988 8


Q ss_pred             ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        93 r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      ++++++|+  ++|+++.|+++.|..++..+|.+...++..+..+
T Consensus       133 ~~~~~~A~--~~~~l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~  174 (260)
T 3kcc_A          133 RSAWVRAK--TACEVAEISYKKFRQLIQVNPDILMRLSAQMARR  174 (260)
T ss_dssp             CCSEEEES--SCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred             CceEEEEC--CCeEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            99999999  5599999999999999999999998887766554

>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}

Probab=99.78  E-value=7.5e-19  Score=154.37  Aligned_cols=116  Identities=26%  Similarity=0.389  Sum_probs=107.3

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA   86 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~   86 (362)
                      +++.++|..+ +++++..++..+..+.|++|++|+++|++++.+|+|.+|.|++++...+     .+..+++|++|||++
T Consensus       127 l~~~~~f~~l-~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~-----~~~~l~~g~~fGe~~  200 (246)
T 3of1_A          127 LKSMPVLKSL-TTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQG-----VINKLKDHDYFGEVA  200 (246)
T ss_dssp             HHHCGGGTTC-CHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTE-----EEEEEETTCEECHHH
T ss_pred             HhhChhhhcC-CHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCc-----eEEEcCCCCcccHHH
Confidence            5678999999 9999999999999999999999999999999999999999999876431     789999999999999


Q ss_pred             ccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhh
Q psy14740         87 LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  130 (362)
Q Consensus        87 l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~  130 (362)
                      ++.+.||+++|+|.  ++|+++.|++++|.+++...|++..+..
T Consensus       201 ~~~~~~~~~~v~a~--~~~~~~~i~~~~f~~ll~~~~~~~~~~~  242 (246)
T 3of1_A          201 LLNDLPRQATVTAT--KRTKVATLGKSGFQRLLGPAVDVLKLND  242 (246)
T ss_dssp             HHHTCBCSSEEEES--SCEEEEEEEHHHHHHHCTTHHHHHHHTC
T ss_pred             HhCCCCcccEEEEC--CCEEEEEEeHHHHHHHhccHHHHHhccC
Confidence            99999999999999  5699999999999999999999876543

>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*

Probab=99.78  E-value=7.1e-19  Score=152.15  Aligned_cols=121  Identities=17%  Similarity=0.208  Sum_probs=110.6

Q ss_pred             cccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeee
Q psy14740          4 NPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFG   83 (362)
Q Consensus         4 ~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fG   83 (362)
                      +..|+++|+|..+ +++++..++..++.+.|++|++|+++||+++.+|+|.+|.|+++ .+.+ |++..+..++||++||
T Consensus         3 ~~~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~-G~~~~~~~~~~G~~~G   79 (220)
T 2fmy_A            3 QMRLTDTNLLEVL-NSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVY-LAYE-DKEFTLAILEAGDIFC   79 (220)
T ss_dssp             TTCSCSSCHHHHT-TSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEE-EECS-SCEEEEEEEETTCEEE
T ss_pred             hhhhhcChhhhcC-CHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEE-ECCC-CCEEEEEEcCCCCEeC
Confidence            4578999999999 99999999999999999999999999999999999999999995 6666 5668999999999999


Q ss_pred             cccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         84 EKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        84 E~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      |       |++++++|.  ++|+++.|++++|..++..+|.+...++..+..+
T Consensus        80 ~-------~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~  123 (220)
T 2fmy_A           80 T-------HTRAFIQAM--EDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDL  123 (220)
T ss_dssp             S-------CSSSEEEES--SSEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred             C-------ccceEEEEc--CcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            9       899999999  5599999999999999999999998877766544

>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2

Probab=99.78  E-value=7.2e-19  Score=151.44  Aligned_cols=125  Identities=16%  Similarity=0.198  Sum_probs=106.7

Q ss_pred             ccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc
Q psy14740          9 LRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ   88 (362)
Q Consensus         9 ~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~   88 (362)
                      +-|.|... ++.+...++..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++..+..++||++|||++++
T Consensus         3 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~-G~~~~~~~~~~G~~~G~~~~~   80 (213)
T 1o5l_A            3 SDKIHHHH-HHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSEN-GKTLEIDEIKPVQIIASGFIF   80 (213)
T ss_dssp             -----------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTT-SCEEEEEEECSSEESSGGGTT
T ss_pred             ccccchhh-ccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCC-CCEEEEEEecCCCEeeeHHHh
Confidence            45778888 9999999999999999999999999999999999999999999999887 555899999999999999999


Q ss_pred             CCC-cceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         89 GDD-LRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        89 ~~~-~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      .+. ++.++++|.  ++|+++.|+++.|..++..+|.+...++..+..+.
T Consensus        81 ~~~~~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~  128 (213)
T 1o5l_A           81 SSEPRFPVNVVAG--ENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEHF  128 (213)
T ss_dssp             SSSCBCSSEEEES--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             cCCCCceEEEEEc--cceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence            876 999999999  56999999999999999999999988877766543

>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*

Probab=99.78  E-value=1.2e-18  Score=165.18  Aligned_cols=128  Identities=30%  Similarity=0.500  Sum_probs=109.5

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCC-----CCcceEEEEecCC
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPN-----STEEKYIRTLYKG   79 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~-----~~~~~~~~~l~~G   79 (362)
                      ..++++++|..+ +++++..|+..+..+.|++|++|+++|++++.+|||.+|.|++++...+     .+++..+..+++|
T Consensus       267 ~~L~~v~lf~~L-s~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G  345 (416)
T 3tnp_B          267 SFIESLPFLKSL-EVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRG  345 (416)
T ss_dssp             SSGGGCGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTT
T ss_pred             HHHhhchHhhcC-CHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCC
Confidence            357889999999 9999999999999999999999999999999999999999999977654     1445789999999


Q ss_pred             CeeecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         80 DFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        80 ~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      ++|||++++.+.||++||+|.  ++|+++.|++++|.+++..+|.+..+.+..+..
T Consensus       346 ~~fGE~all~~~~r~~tv~A~--~~~~ll~I~~~~f~~ll~~~p~i~~~~~~~~~~  399 (416)
T 3tnp_B          346 QYFGELALVTNKPRAASAHAI--GTVKCLAMDVQAFERLLGPCMEIMKRNIATYEE  399 (416)
T ss_dssp             CEESGGGGTCCSCCSSEEEEE--EEEEEEEEEHHHHHHHHCCHHHHHTCC------
T ss_pred             CEecHHHHhCCCCceeEEEEc--CCeEEEEEEHHHHHHHhcchHHHHHHHHHHHHH
Confidence            999999999999999999999  569999999999999999999998876655443

>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}

Probab=99.78  E-value=3.3e-19  Score=141.95  Aligned_cols=110  Identities=15%  Similarity=0.330  Sum_probs=99.6

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEec-CCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYK-EGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~-~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++++|..+ +++++..|+..++.+.|+ +|++|+++|++++.+|+|++|.|+++.  .+ ++.   ..+++|++|||
T Consensus        17 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~-g~~---~~l~~G~~fG~   89 (134)
T 2d93_A           17 FMHQLPAFANM-TMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISH--PD-GKV---ENLFMGNSFGI   89 (134)
T ss_dssp             HHHHSSTTTSS-CHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEEC--SS-SCE---EEECTTCEESC
T ss_pred             HHhCCcchhhC-CHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEc--CC-CcE---EEecCCCccCh
Confidence            47889999999 999999999999999999 999999999999999999999999984  33 332   56899999999


Q ss_pred             ccccCCCcceeeE-EecCCCCeEEEEEehhhHHHHhhchHH
Q psy14740         85 KALQGDDLRTANI-VAADPEGVSCLVIDQETFNQLISSLDE  124 (362)
Q Consensus        85 ~~l~~~~~r~~~~-~A~~~~~~~~~~i~~~~f~~l~~~~p~  124 (362)
                      .+++.+.++.+++ +|.  ++|+++.|++++|..++...+.
T Consensus        90 ~~~~~~~~~~~~~~~a~--~~~~~~~i~~~~~~~l~~~~~~  128 (134)
T 2d93_A           90 TPTLDKQYMHGIVRTKV--DDCQFVCIAQQDYWRILNHVEK  128 (134)
T ss_dssp             CSSSCCEECCSEEEESS--SSEEEEEEEHHHHHHHSSCCSS
T ss_pred             hHhcCCCcceeEEEEEe--cceEEEEEeHHHHHHHHHHHHh
Confidence            9999999999999 999  5699999999999999877553

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.76  E-value=6.2e-19  Score=163.39  Aligned_cols=158  Identities=13%  Similarity=0.043  Sum_probs=100.9

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.+...||.|+||.||.+...  .++.+|+|+++.+.....    ...                                
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr----~v~--------------------------------  138 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFR----TVK--------------------------------  138 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCC----CCC--------------------------------
T ss_pred             EEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHH----HHH--------------------------------
Confidence            789999999999999999853  488999999865421100    000                                


Q ss_pred             ccchhhhhccccc--cccchhh--hhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        231 YVDETSERRRAPQ--IVETRQQ--QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       231 ~~~~~~~~~~~~~--~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                           ..+++...  ..+....  -....|...|..+.++++.... .+... ..++||||++|++|.++..      .+
T Consensus       139 -----~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~-p~~~~-~~~LVME~i~G~~L~~l~~------~~  205 (397)
T 4gyi_A          139 -----ANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE-PIAQS-RHTIVMSLVDALPMRQVSS------VP  205 (397)
T ss_dssp             -------CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC-EEEEE-TTEEEEECCSCEEGGGCCC------CS
T ss_pred             -----HHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeecc-CceEEEEecCCccHhhhcc------cH
Confidence                 00000000  0000000  1123455566665443332111 11111 2379999999988865432      22


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----------cEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----------YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----------~~kl~DFG~a~~~~~~  359 (362)
                      ....++.|++.+|.+||++|||||||||.|||++.+|          .+.|+||+-+.....|
T Consensus       206 ~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp  268 (397)
T 4gyi_A          206 DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHP  268 (397)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence            3467889999999999999999999999999998776          3899999988765544

>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1

Probab=99.76  E-value=1.3e-18  Score=150.82  Aligned_cols=118  Identities=14%  Similarity=0.072  Sum_probs=108.0

Q ss_pred             ccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccc
Q psy14740          7 LKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA   86 (362)
Q Consensus         7 L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~   86 (362)
                      |+++|+|..+ +++++..|+..++.+.|++|++||++|++++.+|+|.+|.|+++ .+.+ |++..+..++||++||   
T Consensus         2 l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~-G~~~~~~~~~~G~~fG---   75 (222)
T 1ft9_A            2 PPRFNIANVL-LSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGE-EREISLFYLTSGDMFC---   75 (222)
T ss_dssp             CCCCCTHHHH-TSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEET-TEEEEEEEEETTCEEE---
T ss_pred             cccchhhhcC-CHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCC-CCEEEEEEcCCCCEec---
Confidence            6889999999 99999999999999999999999999999999999999999997 6666 5668999999999999   


Q ss_pred             ccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         87 LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        87 l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                          .|++++++|.  ++|+++.|+++.|..++..+|.+...++..+..+
T Consensus        76 ----~~~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  119 (222)
T 1ft9_A           76 ----MHSGCLVEAT--ERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRA  119 (222)
T ss_dssp             ----SCSSCEEEES--SCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred             ----CCCCEEEEEc--cceEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence                7899999999  5599999999999999999999988777665543

>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A

Probab=99.75  E-value=5.9e-18  Score=149.36  Aligned_cols=122  Identities=10%  Similarity=0.102  Sum_probs=109.7

Q ss_pred             ccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc
Q psy14740          9 LRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ   88 (362)
Q Consensus         9 ~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~   88 (362)
                      ....|..+ ++++++.|+..++.+.|++|++|+++|++++.+|+|.+|.|+++..+.+ |++.++..++||++|||  ++
T Consensus        13 ~~~p~~~l-~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~-G~~~~~~~~~~G~~~G~--~l   88 (250)
T 3e6c_C           13 AIIPDNFF-PIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFED-GSEKLLYYAGGNSLIGK--LY   88 (250)
T ss_dssp             CSSSBSCS-CCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTT-SCEEEEEEECTTCEECC--CS
T ss_pred             hccchhhC-CHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCC-CCEEEEEEecCCCEEee--ec
Confidence            33334777 9999999999999999999999999999999999999999999999888 55689999999999999  77


Q ss_pred             CCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         89 GDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        89 ~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                      .+. ++++++|.  ++|+++.|+++.|..++..+|.+...++..+..+.
T Consensus        89 ~~~-~~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l  134 (250)
T 3e6c_C           89 PTG-NNIYATAM--EPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKV  134 (250)
T ss_dssp             CCS-CCEEEEES--SSEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred             CCC-CceEEEEc--ccEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence            778 99999999  55999999999999999999999988877665543

>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A

Probab=99.74  E-value=2.7e-17  Score=144.08  Aligned_cols=118  Identities=13%  Similarity=0.085  Sum_probs=104.1

Q ss_pred             ccCCHHHHHHHHh--hcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCc
Q psy14740         15 HLVNQGVILTIVY--FSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL   92 (362)
Q Consensus        15 ~l~~~~~~~~l~~--~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~   92 (362)
                      ++ +++++..++.  .++.+.|++|++||++||+++.+|+|.+|.|+++..+.+ |++.++..+ ||++|||++++.+.+
T Consensus         3 ~l-~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~-G~e~~~~~~-~G~~~Ge~~~~~~~~   79 (238)
T 2bgc_A            3 NA-QAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISEN-GTIMNLQYY-KGAFVIMSGFIDTET   79 (238)
T ss_dssp             -C-HHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTT-SCEEEEEEE-ESSEEEESBCTTTCC
T ss_pred             CC-CHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCC-CCEEEEEEc-CCCEecchhhhcCCC
Confidence            56 8999999985  589999999999999999999999999999999999888 555889999 999999999999887


Q ss_pred             c--eeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         93 R--TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        93 r--~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +  .++++|++ ++|+++.|+++.|..++..+|.+...++..+..+
T Consensus        80 ~~~~~~~~a~~-~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~  124 (238)
T 2bgc_A           80 SVGYYNLEVIS-EQATAYVIKINELKELLSKNLTHFFYVFQTLQKQ  124 (238)
T ss_dssp             BSCCCEEEECS-SEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cCcceeEEEEE-cceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            5  67788874 3599999999999999999999998887766544

>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*

Probab=99.72  E-value=5.3e-17  Score=142.65  Aligned_cols=115  Identities=20%  Similarity=0.198  Sum_probs=104.3

Q ss_pred             HHHHHHHHhhcc---eeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCc--c
Q psy14740         19 QGVILTIVYFSS---QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL--R   93 (362)
Q Consensus        19 ~~~~~~l~~~~~---~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~--r   93 (362)
                      ++.++.|+..+.   .+.|++|++|+++|++++.+|+|++|.|+++..+.+ |++.++..++||++|||.+++.+.|  +
T Consensus        30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~-G~~~~l~~~~~g~~~G~~~~~~~~~~~~  108 (243)
T 3la7_A           30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEA-GEEITVALLRENSVFGVLSLLTGNKSDR  108 (243)
T ss_dssp             HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTT-CCEEEEEEECTTCEESCHHHHSSCCSBC
T ss_pred             HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCC-CCEEEEEEecCCCEEcchHHhCCCCCcc
Confidence            577888888888   999999999999999999999999999999999888 5558999999999999999998876  5


Q ss_pred             eeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         94 TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        94 ~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .++++|+  ++|+++.|+++.|..++..+|.+...++..+..+
T Consensus       109 ~~~~~A~--~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~  149 (243)
T 3la7_A          109 FYHAVAF--TPVELLSAPIEQVEQALKENPELSMLMLRGLSSR  149 (243)
T ss_dssp             CEEEEES--SSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             eEEEEEc--cceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            6999999  5699999999999999999999998887766554

>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2

Probab=99.70  E-value=3.9e-17  Score=157.31  Aligned_cols=118  Identities=30%  Similarity=0.419  Sum_probs=103.6

Q ss_pred             cccccccccccCCHHHHHHHHhhcce-eEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQ-TFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~-~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++|+|.++ +++++..|+..+.. +.|++|++|+++||+++.+|||.+|.|+++...   .  ..+..+++|++|||
T Consensus       338 ~l~~~~~f~~l-~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~---~--~~~~~l~~G~~fGe  411 (469)
T 1o7f_A          338 ELLHIKALSHL-STTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG---K--GVVCTLHEGDDFGK  411 (469)
T ss_dssp             HHTTCGGGTTS-CHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETT---T--EEEEEEETTCEECG
T ss_pred             HHhcCHhhhhC-CHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEEcC---C--eeEEEecCCCEEEE
Confidence            46789999999 99999999999985 589999999999999999999999999998642   2  37999999999999


Q ss_pred             ccccCCCcceeeEEecCCC-CeEEEEEehhhHHHHhhchHHHHHhhhh
Q psy14740         85 KALQGDDLRTANIVAADPE-GVSCLVIDQETFNQLISSLDEIRTKYVD  131 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~-~~~~~~i~~~~f~~l~~~~p~~~~~~~~  131 (362)
                      ++++.+.||++||+|.  + +|+++.|++++|.+++..+|.+..++.+
T Consensus       412 ~~ll~~~~~~~tv~a~--~~~~~~~~i~~~~f~~ll~~~p~~~~~l~e  457 (469)
T 1o7f_A          412 LALVNDAPRAASIVLR--EDNCHFLRVDKEDFNRILRDVEANTVRLKE  457 (469)
T ss_dssp             GGGTCCSCCSSEEEES--SSSEEEEEEEHHHHHHHHHHTTCC------
T ss_pred             ehhhcCCCceEEEEEe--cCCEEEEEEcHHHHHHHHHHChHHHHHHHh
Confidence            9999999999999999  5 5999999999999999999998776543

>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A

Probab=99.66  E-value=6.3e-16  Score=131.00  Aligned_cols=96  Identities=16%  Similarity=0.258  Sum_probs=86.4

Q ss_pred             eeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEEEE
Q psy14740         31 QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVI  110 (362)
Q Consensus        31 ~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i  110 (362)
                      ++.|++|++||++||+++.+|+|.+|.|+++..+.+ |++..+..++||++||| +++.+.|++++++|.  ++|+++.|
T Consensus         1 i~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~G~~~Ge-~~~~~~~~~~~~~A~--~~~~v~~i   76 (195)
T 3b02_A            1 MKRFARKETIYLRGEEARTLYRLEEGLVRVVELLPD-GRLITLRHVLPGDYFGE-EALEGKAYRYTAEAM--TEAVVQGL   76 (195)
T ss_dssp             CEEECTTCEEECTTSBCCCEEEEEESCEEEEEECTT-SCEEEEEEECTTCEECG-GGGTCSBCSSEEEES--SSEEEEEE
T ss_pred             CeEcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCC-CCEEEEEEecCCCEech-hhhCCCCceeEEEEC--CcEEEEEE
Confidence            368999999999999999999999999999998887 55588999999999999 999999999999999  55999999


Q ss_pred             ehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740        111 DQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus       111 ~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      +++.|.      |.+...++..+..+
T Consensus        77 ~~~~~~------p~~~~~~~~~l~~~   96 (195)
T 3b02_A           77 EPRAMD------HEALHRVARNLARQ   96 (195)
T ss_dssp             CGGGCC------HHHHHHHHHHHHHH
T ss_pred             cHHHcC------HHHHHHHHHHHHHH
Confidence            999997      88887777666544

>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E

Probab=99.64  E-value=9.9e-16  Score=160.40  Aligned_cols=110  Identities=30%  Similarity=0.398  Sum_probs=98.2

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeE-ecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTF-YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~-~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++|+|+++ +...+..|+..+.... +++|++|++|||.++.+|||++|.|.|++..     ...+..+++||.|||
T Consensus       338 ~L~~i~~f~~L-s~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~~~-----~~~v~~L~~Gd~FGE  411 (999)
T 4f7z_A          338 ELLHIKALSHL-STTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGK  411 (999)
T ss_dssp             HHTTCGGGTTS-CHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEETT-----TEEEEEEETTCEECG
T ss_pred             HHHhhHHHhcC-CHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEEcC-----CcceEEecCCCcccc
Confidence            47889999999 9999999999998655 5789999999999999999999999998632     246899999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhch
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  122 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~  122 (362)
                      +|++.+.||.|||+|.+ .+|.++.|++++|.+++...
T Consensus       412 lALL~~~PR~aTV~a~~-d~c~fl~i~k~df~~il~~~  448 (999)
T 4f7z_A          412 LALVNDAPRAASIVLRE-DNCHFLRVDKEDGNRILRDV  448 (999)
T ss_dssp             GGGTCSCBCSSEEEESS-SSEEEEEEEHHHHHHHHHHH
T ss_pred             hhhccCCCeeEEEEEec-CceEEEEeeHHHHHHHHhHH
Confidence            99999999999999984 25999999999999988653

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*

Probab=99.63  E-value=2e-17  Score=153.58  Aligned_cols=121  Identities=31%  Similarity=0.403  Sum_probs=0.4

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      +.+++.|+|+++ ++++++.++..++.+.|++||+|++|||+++.+|+|.+|.|++...+        ...++||++|||
T Consensus       228 ~~l~~~~lf~~l-s~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~--------~~~l~~G~~fGe  298 (355)
T 3beh_A          228 QLVAAVPLFQKL-GPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--------PVELGPGAFFGE  298 (355)
T ss_dssp             C-------------------------------------------------------------------------------
T ss_pred             hhhhcccccccC-CHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC--------eeEECCCCEEee
Confidence            357889999999 99999999999999999999999999999999999999999998653        247899999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.|++++++|.  ++|+++.+++++|.+++.++|++...+.+....+
T Consensus       299 ~~~l~~~~~~~~~~A~--~~~~l~~i~~~~f~~ll~~~p~~~~~l~~~l~~r  348 (355)
T 3beh_A          299 MALISGEPRSATVSAA--TTVSLLSLHSADFQMLCSSSPEIAEIFRKTALER  348 (355)
T ss_dssp             ----------------------------------------------------
T ss_pred             hHHhCCCCcceEEEEC--ccEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence            9999999999999999  5599999999999999999999998877665543

>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}

Probab=99.62  E-value=1.1e-15  Score=152.72  Aligned_cols=116  Identities=30%  Similarity=0.436  Sum_probs=106.8

Q ss_pred             cccccccccccCCHHHHHHHHhhcc-eeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSS-QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~-~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++++|.++ +++++..|+..+. .+.|++|++||++||+++.+|+|++|.|++++..   +  .++..++||++|||
T Consensus        33 ~L~~~~lF~~L-s~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g---~--~il~~l~~Gd~fGe  106 (694)
T 3cf6_E           33 ELLHIKALSHL-STTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG---K--GVVCTLHEGDDFGK  106 (694)
T ss_dssp             HHTTCGGGTTS-CHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEETT---T--EEEEEEETTCEECH
T ss_pred             HHHcChhhccC-CHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEeC---C--EEEEEeCCCCEeeh
Confidence            47889999999 9999999999998 7899999999999999999999999999998642   2  58999999999999


Q ss_pred             ccccCCCcceeeEEecCCC-CeEEEEEehhhHHHHhhchHHHHHhh
Q psy14740         85 KALQGDDLRTANIVAADPE-GVSCLVIDQETFNQLISSLDEIRTKY  129 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~-~~~~~~i~~~~f~~l~~~~p~~~~~~  129 (362)
                      .+++.+.+++++|+|.  + +|+++.|++++|.+++..+|.+..++
T Consensus       107 ~al~~~~~~~~tv~A~--edd~~ll~I~~~~f~~ll~~~p~l~~~l  150 (694)
T 3cf6_E          107 LALVNDAPRAASIVLR--EDNCHFLRVDKEDFNRILRDVEANTVRL  150 (694)
T ss_dssp             HHHHHTCBCSSEEEEC--SSSEEEEEEEHHHHHHHTTTTCCCCEEE
T ss_pred             HHHhCCCCceEEEEEe--eCceEEEEEeHHHHHHHHHHCHHHHHHH
Confidence            9999999999999999  6 49999999999999999999876544

>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}

Probab=99.57  E-value=6.9e-15  Score=125.25  Aligned_cols=100  Identities=22%  Similarity=0.288  Sum_probs=85.2

Q ss_pred             HHhhcceeEecCCCEEEecCCCC--CeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCC
Q psy14740         25 IVYFSSQTFYKEGDYIIRQGARG--DTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADP  102 (362)
Q Consensus        25 l~~~~~~~~~~~g~~i~~~g~~~--~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~  102 (362)
                      |...++.+.|++|++|+++||++  +.+|+|.+|.|+++..+.+ |++..+..++||++||| +++.+.|++++++|+  
T Consensus         1 l~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~-G~~~~~~~~~~g~~~G~-~~l~~~~~~~~~~A~--   76 (202)
T 2zcw_A            1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEE-GNALTLRLVRPGGFFGE-EALFGQERIYFAEAA--   76 (202)
T ss_dssp             -----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTT-SCEEEEEEECTTCEECT-HHHHTCCBCSEEEES--
T ss_pred             CCccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCC-CcEEEEEEecCCCEeee-hhcCCCCcceEEEEc--
Confidence            35677899999999999999999  9999999999999999888 55589999999999999 989999999999999  


Q ss_pred             CCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740        103 EGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus       103 ~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      ++|+++.| ++.|.      |.+...++..+..
T Consensus        77 ~~~~v~~i-~~~~~------p~~~~~~~~~l~~  102 (202)
T 2zcw_A           77 TDVRLEPL-PENPD------PELLKDLAQHLSQ  102 (202)
T ss_dssp             SCEEEEEC-CSSCC------HHHHHHHHHHHHH
T ss_pred             ccEEEEEE-hHhcC------HHHHHHHHHHHHH
Confidence            55999999 99886      7777766665544

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.39  E-value=2.9e-12  Score=113.42  Aligned_cols=142  Identities=14%  Similarity=0.099  Sum_probs=111.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+..|.+....+.|+.+.||++...   ++.+++|......                                       
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~---~~~~vlK~~~~~~---------------------------------------   49 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGE---NENLYLKMTDSRY---------------------------------------   49 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECS---SCEEEEEEECGGG---------------------------------------
T ss_pred             HhccceeEeeccCCCCCeEEEEECC---CCcEEEEeCCccc---------------------------------------
Confidence            4567899999999999999999732   5679999875421                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                          ......+.+|+.+++.+ .+..++++++++...+..|+|||+++|.+|.+...     +.
T Consensus        50 --------------------~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~  104 (263)
T 3tm0_A           50 --------------------KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DE  104 (263)
T ss_dssp             --------------------TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TT
T ss_pred             --------------------CCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----Cc
Confidence                                01123578899999988 46788999999888889999999999999987531     12


Q ss_pred             HHHHHHHHHHHHHHHHHHH-----------------------------------------------------------CC
Q psy14740        306 ATTRFYTACVVEAFDYLHS-----------------------------------------------------------RN  326 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~-----------------------------------------------------------~~  326 (362)
                      .....++.++..+|..||+                                                           ..
T Consensus       105 ~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  184 (263)
T 3tm0_A          105 QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELV  184 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEE
T ss_pred             ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCce
Confidence            2234677889999999998                                                           45


Q ss_pred             cEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        327 IIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       327 iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ++|+|++|.|||++.++.+.|+||+.+..
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            89999999999998765567999998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.26  E-value=2.1e-11  Score=107.45  Aligned_cols=97  Identities=11%  Similarity=0.159  Sum_probs=72.7

Q ss_pred             hhhHHHHHHHhhcCCcc--eeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q psy14740        251 QHIMSEKEIMGEANCDF--IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRN--  326 (362)
Q Consensus       251 ~~~~~E~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~--  326 (362)
                      ..+..|+.+++.+.+.+  +++++.+...++..|+|||+++|.+|.  ..   ..+.   ..++.++...|..||+..  
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~---~~~~---~~~~~~l~~~l~~lh~~~~~  129 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS---HLAP---AEKVSIMADAMRRLHTLDPA  129 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS---CCCH---HHHHHHHHHHHHHHTTSCGG
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC---cCCH---hHHHHHHHHHHHHHhCCCCC
Confidence            34678999998885433  677888888878899999999999884  21   1221   245566666777777543  


Q ss_pred             --------------------------------------------------------cEeecCCCCcEEecCCCcEEEEec
Q psy14740        327 --------------------------------------------------------IIYRDLKPENLLLSTSGYVKLVDF  350 (362)
Q Consensus       327 --------------------------------------------------------iiHrDikp~NIl~~~~~~~kl~DF  350 (362)
                                                                              ++|+|++|.||+++.++.+.|+||
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~  209 (264)
T 1nd4_A          130 TCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDC  209 (264)
T ss_dssp             GCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCC
T ss_pred             CCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcc
Confidence                                                                    999999999999987666679999


Q ss_pred             cccee
Q psy14740        351 GFAKK  355 (362)
Q Consensus       351 G~a~~  355 (362)
                      |.|..
T Consensus       210 ~~a~~  214 (264)
T 1nd4_A          210 GRLGV  214 (264)
T ss_dssp             TTCEE
T ss_pred             hhccc
Confidence            99864

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.15  E-value=2.1e-10  Score=106.27  Aligned_cols=103  Identities=17%  Similarity=0.270  Sum_probs=82.1

Q ss_pred             hhhHHHHHHHhhcC--Ccceeeeeeeeecc---ceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-
Q psy14740        251 QHIMSEKEIMGEAN--CDFIVKLYKTFKDK---KYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS-  324 (362)
Q Consensus       251 ~~~~~E~~~l~~l~--h~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~-  324 (362)
                      ..+.+|..+++.+.  +..+++++.++.+.   +..|+|||+++|..+.+..  ...++......++.++...|..||+ 
T Consensus        81 ~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~  158 (359)
T 3dxp_A           81 HAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTV  158 (359)
T ss_dssp             -CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence            45778999999886  45688888887766   4589999999988775411  1246788888899999999999997 


Q ss_pred             ---------------------------------------------------------CCcEeecCCCCcEEecCCCc--E
Q psy14740        325 ---------------------------------------------------------RNIIYRDLKPENLLLSTSGY--V  345 (362)
Q Consensus       325 ---------------------------------------------------------~~iiHrDikp~NIl~~~~~~--~  345 (362)
                                                                               .+++|+|++|.|||++.++.  +
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~  238 (359)
T 3dxp_A          159 DYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVL  238 (359)
T ss_dssp             CTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEE
T ss_pred             CchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEE
Confidence                                                                     36999999999999987653  6


Q ss_pred             EEEeccccee
Q psy14740        346 KLVDFGFAKK  355 (362)
Q Consensus       346 kl~DFG~a~~  355 (362)
                      .|+||+.|..
T Consensus       239 ~viDwe~a~~  248 (359)
T 3dxp_A          239 AVLDWELSTL  248 (359)
T ss_dssp             EECCCTTCEE
T ss_pred             EEECcccccc
Confidence            8999998863

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.56  E-value=1.9e-07  Score=84.12  Aligned_cols=103  Identities=19%  Similarity=0.208  Sum_probs=75.6

Q ss_pred             hhhHHHHHHHhhc-CCcc--eeeeeeeeeccc---eEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14740        251 QHIMSEKEIMGEA-NCDF--IVKLYKTFKDKK---YLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS  324 (362)
Q Consensus       251 ~~~~~E~~~l~~l-~h~~--i~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~  324 (362)
                      ..+.+|..+|+.+ .+..  +++++......+   ..|+||++++|.++.....  ..++..+...++.|+...+..||+
T Consensus        55 ~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           55 TNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             HHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHc
Confidence            4578899998877 3332  455555543333   4589999999998875432  246777777788888888888875


Q ss_pred             ----------------------------------------------------------CCcEeecCCCCcEEecC--CCc
Q psy14740        325 ----------------------------------------------------------RNIIYRDLKPENLLLST--SGY  344 (362)
Q Consensus       325 ----------------------------------------------------------~~iiHrDikp~NIl~~~--~~~  344 (362)
                                                                                ..++|+|++|.||+++.  .+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~  212 (304)
T 3sg8_A          133 INISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTI  212 (304)
T ss_dssp             SCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEE
T ss_pred             CCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCE
Confidence                                                                      23799999999999998  456


Q ss_pred             EEEEeccccee
Q psy14740        345 VKLVDFGFAKK  355 (362)
Q Consensus       345 ~kl~DFG~a~~  355 (362)
                      +.++||+.+..
T Consensus       213 ~~~iD~~~~~~  223 (304)
T 3sg8_A          213 CGIIDFGDAAI  223 (304)
T ss_dssp             EEECCCTTCEE
T ss_pred             EEEEeCCCCcc
Confidence            78999998864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.55  E-value=1.4e-06  Score=78.68  Aligned_cols=103  Identities=17%  Similarity=0.106  Sum_probs=68.8

Q ss_pred             hhhHHHHHHHhhcCCc---ceeeeeeeee-ccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--
Q psy14740        251 QHIMSEKEIMGEANCD---FIVKLYKTFK-DKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS--  324 (362)
Q Consensus       251 ~~~~~E~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~--  324 (362)
                      ..+.+|..+|+.+.+.   .+++++.+.. ..+..|++|++++|.++.+..-  ..++......+..++...|..||+  
T Consensus        54 ~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~  131 (306)
T 3tdw_A           54 DELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFP  131 (306)
T ss_dssp             HHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            4578899999998642   3666666653 4566889999999988876321  123333333444444444444432  


Q ss_pred             ----------------------------------------------------------CCcEeecCCCCcEEecC---CC
Q psy14740        325 ----------------------------------------------------------RNIIYRDLKPENLLLST---SG  343 (362)
Q Consensus       325 ----------------------------------------------------------~~iiHrDikp~NIl~~~---~~  343 (362)
                                                                                ..++|+|++|.||+++.   ++
T Consensus       132 ~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~  211 (306)
T 3tdw_A          132 VETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQT  211 (306)
T ss_dssp             HHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSC
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCC
Confidence                                                                      24699999999999987   45


Q ss_pred             c-EEEEeccccee
Q psy14740        344 Y-VKLVDFGFAKK  355 (362)
Q Consensus       344 ~-~kl~DFG~a~~  355 (362)
                      . +.|+||+.+..
T Consensus       212 ~~~~~iD~~~a~~  224 (306)
T 3tdw_A          212 PLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEEECCCTTCEE
T ss_pred             ceEEEEehhhcCC
Confidence            5 48999998763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.45  E-value=3.3e-06  Score=74.43  Aligned_cols=101  Identities=12%  Similarity=0.158  Sum_probs=71.3

Q ss_pred             hhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-----
Q psy14740        251 QHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS-----  324 (362)
Q Consensus       251 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~-----  324 (362)
                      ..+..|...|+.+. +--+++++.+..+.+..|+|||+++|.++.+.....    ......+..++...|.-||.     
T Consensus        64 ~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~  139 (272)
T 4gkh_A           64 NDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCN  139 (272)
T ss_dssp             HHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGG
T ss_pred             hHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCccc
Confidence            34677888888773 334778888888889999999999998877654321    11122344444445555552     


Q ss_pred             -----------------------------------------------------CCcEeecCCCCcEEecCCCcEEEEecc
Q psy14740        325 -----------------------------------------------------RNIIYRDLKPENLLLSTSGYVKLVDFG  351 (362)
Q Consensus       325 -----------------------------------------------------~~iiHrDikp~NIl~~~~~~~kl~DFG  351 (362)
                                                                           ..++|+|+.|.|||++.++.+-|+||+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe  219 (272)
T 4gkh_A          140 CPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG  219 (272)
T ss_dssp             CCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCT
T ss_pred             CCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECc
Confidence                                                                 127999999999999987777899999


Q ss_pred             ccee
Q psy14740        352 FAKK  355 (362)
Q Consensus       352 ~a~~  355 (362)
                      .+..
T Consensus       220 ~a~~  223 (272)
T 4gkh_A          220 RVGI  223 (272)
T ss_dssp             TCEE
T ss_pred             cccc
Confidence            8753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.05  E-value=7.4e-06  Score=75.32  Aligned_cols=31  Identities=16%  Similarity=0.270  Sum_probs=26.1

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ..++|+|++|.|||++.++.+.|+||+.|..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            5799999999999998644578999998763

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.02  E-value=2.3e-05  Score=73.16  Aligned_cols=30  Identities=27%  Similarity=0.359  Sum_probs=25.7

Q ss_pred             HCCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       324 ~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ...++|+|+.|.||+++.+ .++++||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            3579999999999999765 48999998775

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.01  E-value=4.5e-05  Score=69.32  Aligned_cols=30  Identities=20%  Similarity=0.283  Sum_probs=27.6

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .+++|+|++|.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999888889999999875

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.65  E-value=0.00033  Score=65.84  Aligned_cols=32  Identities=16%  Similarity=0.355  Sum_probs=27.8

Q ss_pred             HHCCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        323 HSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       323 H~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      +...++|+|++|.|||++.++ +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            456799999999999998776 99999998763

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.56  E-value=0.00071  Score=60.88  Aligned_cols=77  Identities=12%  Similarity=0.097  Sum_probs=57.3

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      .-++.++.|....+|++..   .+..+++|.....                                             
T Consensus        39 ~~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~---------------------------------------------   70 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND---EVQTVFVKINERS---------------------------------------------   70 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES---SSCEEEEEEEEGG---------------------------------------------
T ss_pred             eeeEEeCCccceeeeEEEE---CCCeEEEEeCCcc---------------------------------------------
Confidence            3457789999999999973   2557888875321                                             


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcC---CcceeeeeeeeeccceEEEEEeccCCcch
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEAN---CDFIVKLYKTFKDKKYLYMLMESCLGGEL  293 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  293 (362)
                                       ....+..|...|+.+.   ...+++++.+....+..|+|||+++|..+
T Consensus        71 -----------------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           71 -----------------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             -----------------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             -----------------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence                             1244678888888773   35788888888777889999999988654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.29  E-value=0.00082  Score=60.01  Aligned_cols=28  Identities=25%  Similarity=0.260  Sum_probs=24.5

Q ss_pred             CcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .++|+|+.|.||+ ..++.+.++||..|.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            4899999999999 566778999998875

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.99  E-value=0.0041  Score=55.81  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=26.4

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .+++|+|++|.|||++.++.+.++||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            4699999999999998776668999988753

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.88  E-value=0.0058  Score=54.98  Aligned_cols=28  Identities=21%  Similarity=0.137  Sum_probs=24.7

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      ..++|+|++|.|||++ + .+.++||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4589999999999998 4 89999998775

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.87  E-value=0.0036  Score=57.85  Aligned_cols=99  Identities=19%  Similarity=0.211  Sum_probs=61.2

Q ss_pred             hhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHH--------------HHHh---c-----CCCC--HH
Q psy14740        252 HIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWT--------------ILRD---K-----GNFD--DA  306 (362)
Q Consensus       252 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~--------------~l~~---~-----~~l~--~~  306 (362)
                      ...+|..+++.+. +.-.+++++.+.++    +||||++|.+|..              .+.+   -     +...  ..
T Consensus        99 ~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~  174 (379)
T 3feg_A           99 SLVLESVMFAILAERSLGPQLYGVFPEG----RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFG  174 (379)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHH
Confidence            3457888887763 33346677666542    8999998765431              1111   0     0111  24


Q ss_pred             HHHHHHHHHHH-------------------HHHHHH----H----CCcEeecCCCCcEEecCC----CcEEEEecccce
Q psy14740        307 TTRFYTACVVE-------------------AFDYLH----S----RNIIYRDLKPENLLLSTS----GYVKLVDFGFAK  354 (362)
Q Consensus       307 ~~~~~~~ql~~-------------------al~~lH----~----~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~  354 (362)
                      ++..+..++-.                   .+.+|.    .    ..++|+|+.+.|||++.+    +.+.++||..|.
T Consensus       175 ~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          175 TMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            55555544422                   233332    1    258999999999999876    789999998875

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.66  E-value=0.017  Score=50.90  Aligned_cols=34  Identities=12%  Similarity=0.159  Sum_probs=26.5

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeec
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMK  184 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~  184 (362)
                      .+..-+..+|.|..+.||++...  +++.+.+|...
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~--DG~~~~vK~~~   48 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELA--DGTPLFVKALP   48 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEET--TSCEEEEEECC
T ss_pred             CCeEEEEecCCCCCeEEEEEEEC--CCCEEEEEEeC
Confidence            44566788999999999999843  36789999754

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.63  E-value=0.0074  Score=56.76  Aligned_cols=29  Identities=31%  Similarity=0.528  Sum_probs=24.3

Q ss_pred             CcEeecCCCCcEEecCC----------------------------CcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTS----------------------------GYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~----------------------------~~~kl~DFG~a~  354 (362)
                      .++|+|+.+.|||++.+                            +.+.++||..|.
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~  306 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  306 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence            58999999999999875                            678999998775

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.61  E-value=0.0092  Score=54.74  Aligned_cols=28  Identities=21%  Similarity=0.483  Sum_probs=23.8

Q ss_pred             CcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      +++|+|++|.|||++.++ +.++||..|.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            589999999999997654 8999998775

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.47  E-value=0.0089  Score=53.95  Aligned_cols=32  Identities=31%  Similarity=0.391  Sum_probs=27.4

Q ss_pred             HCCcEeecCCCCcEEecCC----CcEEEEeccccee
Q psy14740        324 SRNIIYRDLKPENLLLSTS----GYVKLVDFGFAKK  355 (362)
Q Consensus       324 ~~~iiHrDikp~NIl~~~~----~~~kl~DFG~a~~  355 (362)
                      ...++|+|+.|.||+++.+    +.+.++||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            3479999999999999874    6799999998863

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.94  E-value=0.041  Score=52.11  Aligned_cols=32  Identities=6%  Similarity=-0.007  Sum_probs=20.8

Q ss_pred             EEEEecccceecEEEEEecCCCCCceeeeeecc
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPSRSFALKQMKK  185 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~  185 (362)
                      -+..++.|--..+|++...+ .+..+.+|+..+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g~  143 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMS-KQAKYLIRLYGP  143 (458)
T ss_dssp             EEEEECC--CEEEEEEEETT-TTEEEEEEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECC-CCceEEEEECCC
Confidence            45678888889999998542 235678887643

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=94.48  E-value=0.24  Score=46.21  Aligned_cols=28  Identities=25%  Similarity=0.559  Sum_probs=25.3

Q ss_pred             CcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .++|+|+.+.||+ +.++.+.++||..|.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            4899999999999 778899999998875

>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*

Probab=92.07  E-value=0.1  Score=41.26  Aligned_cols=63  Identities=16%  Similarity=0.210  Sum_probs=46.5

Q ss_pred             ecEEEEEecCCCCCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        163 GRVELVQIAGDPSRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       163 g~v~~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      |.|....  ...++...+..+.+++.+|.     +.++.+++.|..+  +.++.++++.|.+++...+.+..
T Consensus        88 G~v~~~~--~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~--~~~~~i~~~~~~~l~~~~p~~~~  155 (161)
T 3idb_B           88 GTFDIYV--KCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSP--GALWGLDRVTFRRIIVKNNAKKR  155 (161)
T ss_dssp             SEEEEEE--EETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSS--EEEEEEEHHHHHHHHHHHHHTSC
T ss_pred             CEEEEEE--cCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCC--eEEEEEeHHHHHHHHHHCHHHHH
Confidence            4444443  23466778888888988884     5667788888765  99999999999999877666543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=89.90  E-value=0.19  Score=45.43  Aligned_cols=31  Identities=13%  Similarity=0.226  Sum_probs=27.3

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      ..++|+|+.|.||+++.++.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4699999999999998888899999987753

>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}

Probab=86.62  E-value=4.6  Score=33.80  Aligned_cols=68  Identities=16%  Similarity=0.289  Sum_probs=50.2

Q ss_pred             ceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc-CCCcceeeEEecCCCCeEEE
Q psy14740         30 SQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ-GDDLRTANIVAADPEGVSCL  108 (362)
Q Consensus        30 ~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~-~~~~r~~~~~A~~~~~~~~~  108 (362)
                      ....+.+|+.+=..--+.+.+++|++|++.++..    ++   ...+.+||++    .+ .+.|+  .+.|.  ++++++
T Consensus        40 ~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~----~~---~~~l~~Gd~~----~~p~~~~H--~~~a~--~~~~~l  104 (227)
T 3rns_A           40 SLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIE----NN---KKTISNGDFL----EITANHNY--SIEAR--DNLKLI  104 (227)
T ss_dssp             EEEEECTTCEEEECSCSSCEEEEEEESEEEEEES----SC---EEEEETTEEE----EECSSCCE--EEEES--SSEEEE
T ss_pred             EEEEECCCCccCccccCCCEEEEEEeCEEEEEEC----CE---EEEECCCCEE----EECCCCCE--EEEEC--CCcEEE
Confidence            4667899999988888999999999999999853    23   2578898874    23 23444  45677  558888


Q ss_pred             EEeh
Q psy14740        109 VIDQ  112 (362)
Q Consensus       109 ~i~~  112 (362)
                      .|..
T Consensus       105 ~i~~  108 (227)
T 3rns_A          105 EIGE  108 (227)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            7733

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=85.36  E-value=3.3  Score=34.59  Aligned_cols=87  Identities=13%  Similarity=0.038  Sum_probs=60.2

Q ss_pred             CCcceeeeeeeeeccceEEEEEeccCCc-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC
Q psy14740        264 NCDFIVKLYKTFKDKKYLYMLMESCLGG-ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS  342 (362)
Q Consensus       264 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~  342 (362)
                      .||++  --.+-.+++.+.+.++.-+++ +... ++   .++...-+.++.+++.... -|...-+|--+.|+||+++.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~---~~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR---KTTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH---TSCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH---hcCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeCC
Confidence            57777  334446778888877765333 4443 33   3677777777777655433 133556788899999999999


Q ss_pred             CcEEEEecccceecC
Q psy14740        343 GYVKLVDFGFAKKLI  357 (362)
Q Consensus       343 ~~~kl~DFG~a~~~~  357 (362)
                      +.+++.-.|+-..+.
T Consensus       121 ~~p~i~hRGi~~~lp  135 (219)
T 4ano_A          121 LEPFFLHVGVKESLP  135 (219)
T ss_dssp             CCEEESCCEETTTBS
T ss_pred             CcEEEEEcCCcccCC
Confidence            999999999865553

>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}

Probab=83.27  E-value=7.7  Score=28.34  Aligned_cols=65  Identities=18%  Similarity=0.265  Sum_probs=43.7

Q ss_pred             ceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEE
Q psy14740         30 SQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCL  108 (362)
Q Consensus        30 ~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~  108 (362)
                      ....+++|..+-..--+.+.+++|++|++.+...    ++   ...+.+||.+=   +=.+.++  ++.+.+  ++.++
T Consensus        39 ~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~----~~---~~~l~~Gd~i~---ip~~~~H--~~~~~~--~~~~~  103 (114)
T 3fjs_A           39 MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVD----GA---QRRLHQGDLLY---LGAGAAH--DVNAIT--NTSLL  103 (114)
T ss_dssp             EEEEECTTCEEEEECCSSCEEEEEEESCEEEEET----TE---EEEECTTEEEE---ECTTCCE--EEEESS--SEEEE
T ss_pred             EEEEECCCCccCceeCCCcEEEEEEECEEEEEEC----CE---EEEECCCCEEE---ECCCCcE--EEEeCC--CcEEE
Confidence            4567889998877766778999999999999743    22   35789998862   2233444  445553  35443

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=82.19  E-value=3.4  Score=34.37  Aligned_cols=88  Identities=9%  Similarity=0.097  Sum_probs=62.1

Q ss_pred             CCcceeeeeeeeeccceEEEEEeccC-CcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC
Q psy14740        264 NCDFIVKLYKTFKDKKYLYMLMESCL-GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS  342 (362)
Q Consensus       264 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~  342 (362)
                      .||+.+.. .+-...+.+.+.++.-+ +.+... ++   .++...-+.++.+++....  |...-+|--+.|+||+++.+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik---~~~~~eKlr~l~ni~~l~~--~~~~r~tf~L~P~NL~f~~~  115 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK---SFTKNEKLRYLLNIKNLEE--VNRTRYTFVLAPDELFFTRD  115 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG---GSCHHHHHHHHHHGGGGGG--GGGSSEECCCSGGGEEECTT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH---hcCHHHHHHHHHHHHHHHH--HhcCceEEEEecceEEEcCC
Confidence            57877765 56666777777777644 334444 32   3677777888888766553  33445778899999999999


Q ss_pred             CcEEEEecccceecCC
Q psy14740        343 GYVKLVDFGFAKKLIG  358 (362)
Q Consensus       343 ~~~kl~DFG~a~~~~~  358 (362)
                      +.+++.-.|+-..+.+
T Consensus       116 ~~p~i~~RGik~~l~P  131 (215)
T 4ann_A          116 GLPIAKTRGLQNVVDP  131 (215)
T ss_dssp             SCEEESCCEETTTBSC
T ss_pred             CCEEEEEccCccCCCC
Confidence            9999999887655433

>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A

Probab=80.52  E-value=2.1  Score=34.49  Aligned_cols=51  Identities=14%  Similarity=0.271  Sum_probs=38.6

Q ss_pred             cceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740         29 SSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus        29 ~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      +....+++|...-..-..++.+++|++|++.+...+.++ .  ....+++||++
T Consensus        43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~-~--~~~~l~~GDv~   93 (178)
T 1dgw_A           43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDG-R--DTYKLDQGDAI   93 (178)
T ss_dssp             EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTE-E--EEEEEETTEEE
T ss_pred             EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCC-c--EEEEECCCCEE
Confidence            446678999876555344689999999999998877653 2  35689999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	362
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-31
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-30
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-30
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-28
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-28
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-28
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-27
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-26
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-25
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-25
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-25
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-24
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-24
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-24
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-24
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-24
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-23
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-23
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-23
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-22
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-22
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-22
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-22
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-21
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-21
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-20
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-20
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-19
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-19
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-18
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-18
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-17
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-17
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-16
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-15
d1cx4a2	147	b.82.3.2 (A:266-412) Regulatory subunit of Protein	6e-15
d1cx4a2	147	b.82.3.2 (A:266-412) Regulatory subunit of Protein	2e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-14
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-13
d1i5za2	132	b.82.3.2 (A:6-137) Catabolite gene activator prote	1e-11
d1ne6a2	132	b.82.3.2 (A:245-376) Regulatory subunit of Protein	2e-10
d1o7fa3	124	b.82.3.2 (A:322-445) Regulatory domain of Epac2, d	6e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-09
d1ne6a1	136	b.82.3.2 (A:109-244) Regulatory subunit of Protein	2e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-09
d1cx4a1	136	b.82.3.2 (A:130-265) Regulatory subunit of Protein	3e-09
d2oz6a2	134	b.82.3.2 (A:9-142) Cyclic AMP receptor-like protei	5e-09
d1vp6a_	133	b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizo	7e-08
d2gaua2	142	b.82.3.2 (A:10-151) Transcriptional regulator PG03	7e-07
d1o5la1	129	b.82.3.2 (A:1-129) CRP-like transcriptional regula	1e-05
d1o7fa2	155	b.82.3.2 (A:13-167) Regulatory domain of Epac2, do	3e-05
d1q3ea_	193	b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus mu	6e-05
d1wgpa_	137	b.82.3.2 (A:) Probable cyclic nucleotide-gated ion	7e-05
d2zcwa2	112	b.82.3.2 (A:6-117) Transcriptional regulator TTHA1	0.002

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 2e-31
 Identities = 37/119 (31%), Positives = 62/119 (52%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           Q+ +   +  +  E EI        I++LY  F D   +Y+++E    G ++  L+    
Sbjct: 43  QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 102

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
           FD+  T  Y   +  A  Y HS+ +I+RD+KPENLLL ++G +K+ DFG++      R 
Sbjct: 103 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 161

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 5e-30
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDA 306
            + +  M E +I+   +   IVKL   F  +  L++L+E C GG +  ++ +      ++
Sbjct: 51  EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES 110

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
             +      ++A +YLH   II+RDLK  N+L +  G +KL DFG + K    
Sbjct: 111 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 163

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 6e-30
 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFD 304
           ++   +  I+ E +++ E N  +IV  Y  F     + + ME   GG L  +L+  G   
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102

Query: 305 DATTRFYTACVVEAFDYLHSRN-IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           +      +  V++   YL  ++ I++RD+KP N+L+++ G +KL DFG + +LI    +
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 1e-28
 Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 57/211 (27%)

Query: 144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAAD 203
           R  R  D +    LG G F  V L +                       +L T+   A  
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLAR-----------------------ELATSREYAI- 38

Query: 204 PEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA 263
                                     K +++         I++  +  ++  E+++M   
Sbjct: 39  --------------------------KILEKR-------HIIKENKVPYVTRERDVMSRL 65

Query: 264 NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLH 323
           +  F VKLY TF+D + LY  +     GEL   +R  G+FD+  TRFYTA +V A +YLH
Sbjct: 66  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125

Query: 324 SRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            + II+RDLKPEN+LL+   ++++ DFG AK
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAK 156

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  110 bits (277), Expect = 1e-28
 Identities = 31/117 (26%), Positives = 51/117 (43%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
                    + Q I+ E   + +      ++    +  +   +++ME CLG     +   
Sbjct: 49  SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH 108

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           K    +      T   ++   YLHS N+I+RD+K  N+LLS  G VKL DFG A  +
Sbjct: 109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  110 bits (276), Expect = 5e-28
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 54/211 (25%)

Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPE 205
           L ++D  V   +G GGFG V   + A D  + +A+K + K ++        A        
Sbjct: 1   LTMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLA-------- 51

Query: 206 GVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC 265
                             L+E                                ++   +C
Sbjct: 52  ------------------LNERI---------------------------MLSLVSTGDC 66

Query: 266 DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
            FIV +   F     L  +++   GG+L   L   G F +A  RFY A ++   +++H+R
Sbjct: 67  PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 126

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            ++YRDLKP N+LL   G+V++ D G A   
Sbjct: 127 FVVYRDLKPANILLDEHGHVRISDLGLACDF 157

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 6e-28
 Identities = 32/111 (28%), Positives = 51/111 (45%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
                ++I  E  I    N + +VK Y   ++    Y+ +E C GGEL+  +       +
Sbjct: 43  AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE 102

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
              + +   ++    YLH   I +RD+KPENLLL     +K+ DFG A   
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 153

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  106 bits (265), Expect = 4e-27
 Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 52/208 (25%)

Query: 150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSC 209
           +      LG G    V          + +A+K +  +   +        +          
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQEL---------- 52

Query: 210 LVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFI 268
                                                   ++  + E +I+ + +    I
Sbjct: 53  ----------------------------------------REATLKEVDILRKVSGHPNI 72

Query: 269 VKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           ++L  T++   + +++ +    GEL+  L +K    +  TR     ++E    LH  NI+
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 132

Query: 329 YRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +RDLKPEN+LL     +KL DFGF+ +L
Sbjct: 133 HRDLKPENILLDDDMNIKLTDFGFSCQL 160

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  104 bits (261), Expect = 5e-26
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDA 306
             ++ +  E + M       +V L+  F+D   + M+ E   GGEL+  + D+ N   + 
Sbjct: 65  SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED 124

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
               Y   V +   ++H  N ++ DLKPEN++ +T  S  +KL+DFG    L
Sbjct: 125 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 176

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (254), Expect = 2e-25
 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 23/166 (13%)

Query: 213 DQETFNQL--ISSLDEIRTKY-----------------VDETSERRRAPQIVETRQQ--- 250
           D+E   +L  I S+ + + KY                 +D  + +  A + +  +QQ   
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61

Query: 251 QHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRF 310
           + I++E  +M E     IV    ++     L+++ME   GG L  ++  +   D+     
Sbjct: 62  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA 120

Query: 311 YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                ++A ++LHS  +I+RD+K +N+LL   G VKL DFGF  ++
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  100 bits (251), Expect = 6e-25
 Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 57/215 (26%)

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           L D +++ TLG G FGRV L++                               A      
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIR-----------------------SRHNGRYYA------ 33

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
              V+ +E                            +V  +Q +H   E+ ++      F
Sbjct: 34  -MKVLKKE---------------------------IVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           I++++ TF+D + ++M+M+   GGEL+++LR    F +   +FY A V  A +YLHS++I
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 125

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           IYRDLKPEN+LL  +G++K+ DFGFAK +    Y+
Sbjct: 126 IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (252), Expect = 7e-25
 Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 58/243 (23%)

Query: 120 SSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFA 179
            S+ E   K  ++  ++     +  + +L     I TLG G FGRV LV+          
Sbjct: 13  ESVKEFLAKAKEDFLKKWETPSQ-NTAQLDQFDRIKTLGTGSFGRVMLVK---------- 61

Query: 180 LKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR 239
                           + N  A                            K +D+     
Sbjct: 62  -------------HKESGNHYAM---------------------------KILDKQ---- 77

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
              ++V+ +Q +H ++EK I+   N  F+VKL  +FKD   LYM+ME   GGE+++ LR 
Sbjct: 78  ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
            G F +   RFY A +V  F+YLHS ++IYRDLKPENLL+   GY+++ DFGFAK++ G 
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194

Query: 360 RYS 362
            ++
Sbjct: 195 TWT 197

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 230 KYVDETSERRRAPQIV--ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMES 287
           + V+ +S++    + V  +   Q  +  E  I+  A    I+ L+++F+  + L M+ E 
Sbjct: 23  RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82

Query: 288 CLGGELWTILRDKGN-FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGY-- 344
             G +++  +       ++     Y   V EA  +LHS NI + D++PEN++  T     
Sbjct: 83  ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142

Query: 345 VKLVDFGFAKKL 356
           +K+++FG A++L
Sbjct: 143 IKIIEFGQARQL 154

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 2e-24
 Identities = 46/221 (20%), Positives = 80/221 (36%), Gaps = 69/221 (31%)

Query: 147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEG 206
           R  D  V+ T+G G +GR + ++                             I+      
Sbjct: 2   RAEDYEVLYTIGTGSYGRCQKIR-----------------------RKSDGKILV----- 33

Query: 207 VSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCD 266
                              E+    + E              ++Q ++SE  ++ E    
Sbjct: 34  -----------------WKELDYGSMTE-------------AEKQMLVSEVNLLRELKHP 63

Query: 267 FIVKLYKTFKDK--KYLYMLMESCLGGELWTIL----RDKGNFDDATTRFYTACVVEAFD 320
            IV+ Y    D+    LY++ME C GG+L +++    +++   D+         +  A  
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 321 YLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             H R+     +++RDLKP N+ L     VKL DFG A+ L
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 164

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (244), Expect = 3e-24
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTF----KDKKYLYMLMESCLGGELWTILRDKGNFD 304
           ++Q    E E++       IV+ Y ++    K KK + ++ E    G L T L+      
Sbjct: 51  ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK 110

Query: 305 DATTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLL-STSGYVKLVDFGFAK 354
               R +   +++   +LH+R   II+RDLK +N+ +   +G VK+ D G A 
Sbjct: 111 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 99.4 bits (247), Expect = 4e-24
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-FDDA 306
             +  + +E  IM + +   ++ L+  F+DK  + +++E   GGEL+  +  +     +A
Sbjct: 68  LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA 127

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKL 356
               Y     E   ++H  +I++ D+KPEN++  T  +  VK++DFG A KL
Sbjct: 128 EVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 179

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.7 bits (245), Expect = 4e-24
 Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 56/210 (26%)

Query: 148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGV 207
           + D  +   LG G FG+V L +     ++ FA+K +KK  V+  DD+             
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDDVE------------ 47

Query: 208 SCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF 267
                                                  T  ++ ++S           F
Sbjct: 48  --------------------------------------CTMVEKRVLSLA-----WEHPF 64

Query: 268 IVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNI 327
           +  ++ TF+ K+ L+ +ME   GG+L   ++    FD +   FY A ++    +LHS+ I
Sbjct: 65  LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 124

Query: 328 IYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
           +YRDLK +N+LL   G++K+ DFG  K+ +
Sbjct: 125 VYRDLKLDNILLDKDGHIKIADFGMCKENM 154

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (242), Expect = 7e-24
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA 306
           +Q Q   +E  ++ +     I+     +     L ++ + C G  L+  L   +  F+  
Sbjct: 46  QQLQAFKNEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                     +  DYLH+++II+RDLK  N+ L     VK+ DFG A   
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 1e-23
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTF-KDKKYLYMLMESCLGGELWTILRDKG 301
            I      Q  ++E  +M +     +V+L     ++K  LY++ E    G L   LR +G
Sbjct: 37  CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 96

Query: 302 N--FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                      ++  V EA +YL   N ++RDL   N+L+S     K+ DFG  K+ 
Sbjct: 97  RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 16/120 (13%)

Query: 146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQ--------VMNLDDLRTA 197
           L + +L+++ T+G G FG V L    G      A+K +K              +  LR +
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRG---NKVAVKCIKNDATAQAFLAEASVMTQLRHS 60

Query: 198 NIVA-----ADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQH 252
           N+V       + +G   +V +      L+  L       +      + +  + E  +   
Sbjct: 61  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.3 bits (239), Expect = 2e-23
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL--RDKGNF 303
           +T + +  + E  +M E     +V+L      +   Y++ E    G L   L   ++   
Sbjct: 53  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
                 +    +  A +YL  +N I+RDL   N L+  +  VK+ DFG ++ + G  Y+
Sbjct: 113 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.6 bits (237), Expect = 3e-23
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG 301
            +  +   +  +++E  +M + +  +IV++    + + +  ++ME    G L   L+   
Sbjct: 44  NEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNR 102

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           +  D         V     YL   N ++RDL   N+LL T  Y K+ DFG +K L
Sbjct: 103 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.6 bits (237), Expect = 4e-23
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
           +Q++  +SE  IMG+ +   ++ L         + ++ E    G L + LR   G F   
Sbjct: 69  KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 128

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL   N ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 129 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 178

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 4e-23
 Identities = 42/123 (34%), Positives = 66/123 (53%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD 299
           R   I+   +  H ++E  ++      F+  L   F+    L  +ME   GGEL+  L  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
           +  F +   RFY A +V A +YLHSR+++YRD+K ENL+L   G++K+ DFG  K+ I  
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158

Query: 360 RYS 362
             +
Sbjct: 159 GAT 161

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 1e-22
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 65/248 (26%)

Query: 117 QLISSLDEIRTKYVDETSERRRLNEEFRSLRLSDLRVITTLGVGGFGRVELVQIAGDPS- 175
           QL++   E+RT  +   +E+         + + +  ++  LG G +G+V LV+       
Sbjct: 1   QLLTVKHELRTANLTGHAEK---------VGIENFELLKVLGTGAYGKVFLVRKISGHDT 51

Query: 176 -RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE 234
            + +A+K +KK+ ++                         E        L+ IR      
Sbjct: 52  GKLYAMKVLKKATIVQKAKTT-------------------EHTRTERQVLEHIR------ 86

Query: 235 TSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELW 294
                                           F+V L+  F+ +  L+++++   GGEL+
Sbjct: 87  -----------------------------QSPFLVTLHYAFQTETKLHLILDYINGGELF 117

Query: 295 TILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           T L  +  F +   + Y   +V A ++LH   IIYRD+K EN+LL ++G+V L DFG +K
Sbjct: 118 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 177

Query: 355 KLIGPRYS 362
           + +     
Sbjct: 178 EFVADETE 185

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.8 bits (232), Expect = 2e-22
 Identities = 30/113 (26%), Positives = 52/113 (46%)

Query: 250 QQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR 309
            +  + E +++ E +   I+ L   F  K  + ++ +         I  +      +  +
Sbjct: 44  NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIK 103

Query: 310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
            Y    ++  +YLH   I++RDLKP NLLL  +G +KL DFG AK    P  +
Sbjct: 104 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 2e-22
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 245 VETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNF 303
            E    + +M E +IM + +  +IV+L    + +  L ++ME   GG L   L  K    
Sbjct: 48  TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEI 106

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +        V     YL  +N ++RDL   N+LL    Y K+ DFG +K L
Sbjct: 107 PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 159

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 3e-22
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--F 303
            +      ++E  +M +     +V+LY     +  +Y++ E    G L   L+       
Sbjct: 48  GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKL 106

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
                    A + E   ++  RN I+RDL+  N+L+S +   K+ DFG A+ +    Y
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 4e-22
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD 304
            +  +   + E ++M   + + +V+LY     ++ ++++ E    G L   LR+    F 
Sbjct: 39  GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 98

Query: 305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
                     V EA +YL S+  ++RDL   N L++  G VK+ DFG ++ ++   Y+
Sbjct: 99  TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 92.3 bits (228), Expect = 5e-22
 Identities = 31/109 (28%), Positives = 51/109 (46%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT 307
                 + E  I+ E     IVKLY     KK L ++ E         +   +G  +  T
Sbjct: 42  GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101

Query: 308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
            + +   ++    Y H R +++RDLKP+NLL++  G +K+ DFG A+  
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF 150

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 2e-21
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 24/135 (17%)

Query: 246 ETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK---- 300
           ++ +++ +MSE ++M +  + + IV L         +Y++ E C  G+L   LR K    
Sbjct: 80  DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKF 139

Query: 301 -------------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST 341
                                        +   V +  ++L  ++ ++RDL   N+L++ 
Sbjct: 140 SEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 199

Query: 342 SGYVKLVDFGFAKKL 356
              VK+ DFG A+ +
Sbjct: 200 GKVVKICDFGLARDI 214

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 90.9 bits (225), Expect = 2e-21
 Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 3/111 (2%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT 308
           ++  + +E  ++ +     IV L   ++   +LY++M+   GGEL+  + +KG + +   
Sbjct: 50  KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 109

Query: 309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
                 V++A  YLH   I++RDLKPENLL  +      + + DFG +K  
Sbjct: 110 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 3e-21
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 10/119 (8%)

Query: 248 RQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGN 302
           +       E E+   A  C  IV++   +++    +K L ++ME   GGEL++ ++D+G+
Sbjct: 46  QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 105

Query: 303 --FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKL 356
             F +         + EA  YLHS NI +RD+KPENLL ++   +  +KL DFGFAK+ 
Sbjct: 106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 7e-21
 Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 59/219 (26%)

Query: 143 FRSLRLSDL-RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVA 201
           FR   + D       LG G F  V+  +        +A K +KK                
Sbjct: 3   FRQENVDDYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFIKK---------------- 45

Query: 202 ADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG 261
                                                RR         ++ I  E  I+ 
Sbjct: 46  -------------------------------------RRTKSSRRGVSREDIEREVSILK 68

Query: 262 EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDY 321
           E     ++ L++ +++K  + +++E   GGEL+  L +K +  +     +   ++    Y
Sbjct: 69  EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128

Query: 322 LHSRNIIYRDLKPENLLLSTSGY----VKLVDFGFAKKL 356
           LHS  I + DLKPEN++L         +K++DFG A K+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 1e-20
 Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 58/215 (26%)

Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
           +V   LG GGFG V       D +   A+K ++K ++ +  +L                 
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSD-NLPVAIKHVEKDRISDWGELP---------------- 49

Query: 212 IDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF--IV 269
                                                    +  E  ++ + +  F  ++
Sbjct: 50  -------------------------------------NGTRVPMEVVLLKKVSSGFSGVI 72

Query: 270 KLYKTFKDKKYLYMLMESCLGG-ELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNII 328
           +L   F+      +++E      +L+  + ++G   +   R +   V+EA  + H+  ++
Sbjct: 73  RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 132

Query: 329 YRDLKPENLLLSTS-GYVKLVDFGFAKKLIGPRYS 362
           +RD+K EN+L+  + G +KL+DFG    L    Y+
Sbjct: 133 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT 167

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 87.5 bits (216), Expect = 3e-20
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK----KYLYMLMESCLGGELWT 295
           RA    +         E +     N   IV +Y T + +       Y++ME   G  L  
Sbjct: 41  RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 100

Query: 296 ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKK 355
           I+  +G           A   +A ++ H   II+RD+KP N+++S +  VK++DFG A+ 
Sbjct: 101 IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA 160

Query: 356 L 356
           +
Sbjct: 161 I 161

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 3e-20
 Identities = 25/120 (20%), Positives = 46/120 (38%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
           +    +  + I+ E  +M   +   + +L           +      G  L  +   K N
Sbjct: 48  EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 107

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
                   +   + +  +YL  R +++RDL   N+L+ T  +VK+ DFG AK L      
Sbjct: 108 IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 3e-20
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 19/133 (14%)

Query: 249 QQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN----- 302
           +++ +MSE +++    N   IV L           ++ E C  G+L   LR K +     
Sbjct: 69  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128

Query: 303 -------------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
                         D      ++  V +   +L S+N I+RDL   N+LL+     K+ D
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188

Query: 350 FGFAKKLIGPRYS 362
           FG A+ +      
Sbjct: 189 FGLARDIKNDSNY 201

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 4e-20
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 1/118 (0%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
               ++  + E E+M + +   +V+LY    ++  + ++ E    G L   LR +     
Sbjct: 40  GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 99

Query: 306 ATTR-FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
           A T       V E   YL    +I+RDL   N L+  +  +K+ DFG  + ++  +Y+
Sbjct: 100 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 4e-20
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLY-----KTFKDKKYLYMLMESCLGGELWTILRDKGN 302
              Q  + E +I+     + I+ +       T +  K +Y++    +G +L+ +L+   +
Sbjct: 48  TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH-LMGADLYKLLK-TQH 105

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
             +    ++   ++    Y+HS N+++RDLKP NLLL+T+  +K+ DFG A+  
Sbjct: 106 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 159

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 5e-20
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 244 IVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTIL-RDKGN 302
           + +       + E   M   +   +++LY        + M+ E    G L   L + +G+
Sbjct: 49  LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGH 107

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           F   T   Y   V E   YL S+  I+RDL   NLLL+T   VK+ DFG  + L
Sbjct: 108 FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 2e-19
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-G 301
                  ++  + E   M + +   IVKL     +   ++++ME C  GEL + L+ +  
Sbjct: 45  NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKY 103

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
           + D A+   Y   +  A  YL S+  ++RD+   N+L+S++  VKL DFG ++ +
Sbjct: 104 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 86.0 bits (212), Expect = 2e-19
 Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 7/131 (5%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKD--KKYLYMLME 286
           + ++ T+  +   +I++  +++ I  E +I+        I+ L    KD   +   ++ E
Sbjct: 53  EAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112

Query: 287 SCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YV 345
                +   + +      D   RFY   +++A DY HS  I++RD+KP N+++      +
Sbjct: 113 HVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 169

Query: 346 KLVDFGFAKKL 356
           +L+D+G A+  
Sbjct: 170 RLIDWGLAEFY 180

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (210), Expect = 2e-19
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKD--------KKYLYMLMESCLGGELWTILRD 299
                 + E +I+     + +V L +  +         K  +Y++ + C       +   
Sbjct: 51  GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 110

Query: 300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
              F  +  +     ++    Y+H   I++RD+K  N+L++  G +KL DFG A+     
Sbjct: 111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 170

Query: 360 RYS 362
           + S
Sbjct: 171 KNS 173

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 3e-19
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTF------KDKKYLYMLMESCLGGELWTIL---R 298
           + ++    E +IM + +   IV+L   F      KD+ YL ++++              R
Sbjct: 55  QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114

Query: 299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKL 356
            K        + Y   +  +  Y+HS  I +RD+KP+NLLL      +KL DFG AK+L
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (205), Expect = 7e-19
 Identities = 30/114 (26%), Positives = 55/114 (48%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD 305
           +       + E  ++ E     IV+L+      K L ++ E C            G+ D 
Sbjct: 41  DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP 100

Query: 306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
              + +   +++   + HSRN+++RDLKP+NLL++ +G +KL +FG A+    P
Sbjct: 101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.4 bits (205), Expect = 1e-18
 Identities = 47/250 (18%), Positives = 70/250 (28%), Gaps = 80/250 (32%)

Query: 139 LNEEFRSLRL--SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRT 196
           LN +  SL    +++  +  +G G FGRV   +  G                  L     
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPG------------------LLPYEP 42

Query: 197 ANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSE 256
             +VA                            K + E +             Q     E
Sbjct: 43  FTMVAV---------------------------KMLKEEAS---------ADMQADFQRE 66

Query: 257 KEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN-------------- 302
             +M E +   IVKL       K + +L E    G+L   LR                  
Sbjct: 67  AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 126

Query: 303 ----------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGF 352
                        A        V     YL  R  ++RDL   N L+  +  VK+ DFG 
Sbjct: 127 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL 186

Query: 353 AKKLIGPRYS 362
           ++ +    Y 
Sbjct: 187 SRNIYSADYY 196

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 1e-18
 Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN--F 303
            T   +  + E ++M +   + +V+LY    ++  +Y++ E    G L   L+ +     
Sbjct: 52  GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYL 110

Query: 304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRYS 362
                    A +     Y+   N ++RDL+  N+L+  +   K+ DFG A+ +    Y+
Sbjct: 111 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 1e-18
 Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 17/132 (12%)

Query: 240 RAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR 298
           R  +       +    E E++ +  +   I+ L    + + YLY+ +E    G L   LR
Sbjct: 44  RMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 103

Query: 299 DK----------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS 342
                                       + A V    DYL  +  I+RDL   N+L+  +
Sbjct: 104 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 163

Query: 343 GYVKLVDFGFAK 354
              K+ DFG ++
Sbjct: 164 YVAKIADFGLSR 175

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 3e-18
 Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 60/209 (28%)

Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
             +  +G G +G+V   +   +  R  ALK+++                           
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT------------------------ 45

Query: 212 IDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKL 271
            ++      I  +  +R                               +       +V+L
Sbjct: 46  GEEGMPLSTIREVAVLR------------------------------HLETFEHPNVVRL 75

Query: 272 YKTFKDKK-----YLYMLMESCLGGEL-WTILRDKGNFDDATTRFYTACVVEAFDYLHSR 325
           +      +      L ++ E        +     +      T +     ++   D+LHS 
Sbjct: 76  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 135

Query: 326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
            +++RDLKP+N+L+++SG +KL DFG A+
Sbjct: 136 RVVHRDLKPQNILVTSSGQIKLADFGLAR 164

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 3e-18
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA 306
           +Q+   + E  IMG+ +   I++L       K + ++ E    G L   LR+K G F   
Sbjct: 51  KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 110

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL 356
                   +     YL + N ++RDL   N+L++++   K+ DFG ++ L
Sbjct: 111 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 160

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 78.7 bits (193), Expect = 3e-17
 Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)

Query: 244 IVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN 302
                    +  E       A C  I  +Y   ++  +  ++++         +      
Sbjct: 38  EPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK 97

Query: 303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS-----TSGYVKLVDFGFAKKLI 357
           F   T       ++     +H ++++YRD+KP+N L+       +  + +VDFG  K   
Sbjct: 98  FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 157

Query: 358 GP 359
            P
Sbjct: 158 DP 159

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 7e-17
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 244 IVETRQQQHIMSEKEIMGEANCD--FIVKLYKTFKDK----KYLYMLMESCLGGELWTIL 297
           I  +R+++    E EI          I+               L+++ +    G L+  L
Sbjct: 33  IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92

Query: 298 RDKGNFDDATTRFYTACVVEAFDYLHS--------RNIIYRDLKPENLLLSTSGYVKLVD 349
                  +   +           +LH           I +RDLK +N+L+  +G   + D
Sbjct: 93  NRYTVTVEGMIKLA-LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151

Query: 350 FGFAKKL 356
            G A + 
Sbjct: 152 LGLAVRH 158

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 9e-17
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 249 QQQHIMSEKEIMGEANCDFIVKLYK--TFKDKKYLYMLMESCLGGELWTILRDKGN---- 302
           + + +MSE +I+        V        K    L +++E C  G L T LR K N    
Sbjct: 59  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 118

Query: 303 ------------FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
                               Y+  V +  ++L SR  I+RDL   N+LLS    VK+ DF
Sbjct: 119 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 178

Query: 351 GFAKKL 356
           G A+ +
Sbjct: 179 GLARDI 184

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 1e-16
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESC-LGGELWTILRDKGNFDDA 306
                 + E  ++ E N   IVKL      +  LY++ E      + +            
Sbjct: 43  GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102

Query: 307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP 359
             + Y   +++   + HS  +++RDLKP+NLL++T G +KL DFG A+    P
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (185), Expect = 5e-16
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNF---- 303
           R++   ++E  +M E NC  +V+L       +   ++ME    G+L + LR         
Sbjct: 65  RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

Query: 304 ------DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI 357
                   +        + +   YL++   ++RDL   N +++    VK+ DFG  + + 
Sbjct: 125 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 184

Query: 358 GPRYS 362
              Y 
Sbjct: 185 ETDYY 189

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.9 bits (183), Expect = 9e-16
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 4/118 (3%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYK-TFKDKKYLYMLMESCLGGELWTILRDKG 301
                 +   +  E +I         +   +    +  Y  M+ME               
Sbjct: 39  LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR 98

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLV---DFGFAKKL 356
            F   T       ++   +Y+HS+N I+RD+KP+N L+       LV   DFG AKK 
Sbjct: 99  KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 9e-16
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 248 RQQQHIMSEKEIMGE-ANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG----- 301
           +    ++SE E+M        I+ L         LY+++E    G L   L+ +      
Sbjct: 60  KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 119

Query: 302 -----------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDF 350
                                   V    +YL S+  I+RDL   N+L++    +K+ DF
Sbjct: 120 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 179

Query: 351 GFAKKL 356
           G A+ +
Sbjct: 180 GLARDI 185

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 1e-15
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 8/121 (6%)

Query: 248 RQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDKG 301
              +    E  ++     + ++ L   F   +        Y++M     G     L    
Sbjct: 59  LFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHE 116

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
              +   +F    +++   Y+H+  II+RDLKP NL ++    +K++DFG A++      
Sbjct: 117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT 176

Query: 362 S 362
            
Sbjct: 177 G 177

>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 147

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.1 bits (168), Expect = 6e-15
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 22  ILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTE-----EKYIRTL 76
            L +V       Y +G+ II QG   D+FFI+  G+V++TMK+   ++        I   
Sbjct: 18  RLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARC 77

Query: 77  YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER 136
            +G +FGE AL  +  R A+  A     V CL +D + F +L+    EI  + +    E+
Sbjct: 78  LRGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQ 135

Query: 137 RR 138
             
Sbjct: 136 LV 137

>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 147

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 189 MNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRA 241
           +  +  R A+  A     V CL +D + F +L+    EI  + +    E+  A
Sbjct: 88  LVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVA 138

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-14
 Identities = 22/122 (18%), Positives = 52/122 (42%), Gaps = 2/122 (1%)

Query: 243 QIVETRQQQHIMSEKEIMGEANCDFIVKLYKT-FKDKKYLYMLMESCLGGELWTILRDKG 301
           +I +  +    ++E  IM + +   ++ L     + +    +++     G+L   +R++ 
Sbjct: 65  RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 124

Query: 302 NFDDATTRF-YTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR 360
           +         +   V +   +L S+  ++RDL   N +L     VK+ DFG A+ +    
Sbjct: 125 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184

Query: 361 YS 362
           + 
Sbjct: 185 FD 186

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 1e-13
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 4/121 (3%)

Query: 246 ETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYL----YMLMESCLGGELWTILRDKG 301
                +    E  ++     + ++ L   F   + L     + + + L G     +    
Sbjct: 57  SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116

Query: 302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPRY 361
              D   +F    ++    Y+HS +II+RDLKP NL ++    +K++DFG A+       
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176

Query: 362 S 362
            
Sbjct: 177 G 177

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 2e-13
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 242 PQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWT 295
                    +    E  +M   N   I+ L   F  +K       +Y++ME         
Sbjct: 52  RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV 111

Query: 296 ILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAK 354
           I   +   D     +    ++    +LHS  II+RDLKP N+++ +   +K++DFG A+
Sbjct: 112 I---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167

>d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 132

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Catabolite gene activator protein, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 59.5 bits (143), Expect = 1e-11
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDD-L 92
           Y     +I QG + +T + I KG V V +K     +E  +  L +GDF GE  L  +   
Sbjct: 18  YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEE-GKEMILSYLNQGDFIGELGLFEEGQE 76

Query: 93  RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSL 146
           R+A + A          I  + F QLI    +I  +   + + R +  +E+  +L
Sbjct: 77  RSAWVRAKTA--CEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNL 129

>d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 132

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +++G  I+ QG  GD FFII +G   V  ++  + E   +  L   D+FGE AL  +  R
Sbjct: 30  FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPR 89

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE 135
            A +VA  P  + C+ +D+  F +++    +I  + + + + 
Sbjct: 90  AATVVARGP--LKCVKLDRPRFERVLGPCSDILKRNIQQYNS 129

>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 124

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory domain of Epac2, domains 1 and 3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (130), Expect = 6e-10
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 27  YFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKA 86
               ++  K G  +  QG  G +++II KG V V +          + TL++GD FG+ A
Sbjct: 32  VLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKG-----VVCTLHEGDDFGKLA 86

Query: 87  LQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE 124
           L  D  R A+IV  + +    L +D+E FN+++  ++ 
Sbjct: 87  LVNDAPRAASIVLRE-DNCHFLRVDKEDFNRILRDVEA 123

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.2 bits (134), Expect = 2e-09
 Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 62/222 (27%)

Query: 152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLV 211
            ++  LG G F  V L +   + +   A+K ++  +V          ++           
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVN-NTHVAMKIVRGDKVYTEAAEDEIKLL----------- 63

Query: 212 IDQETFNQLISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKL 271
                                               ++     + KE       + I+KL
Sbjct: 64  ------------------------------------QRVNDADNTKEDS--MGANHILKL 85

Query: 272 YKTF----KDKKYLYMLMESCLGGELWTILRDK-GNFDDATTRFYTACVVEAFDYLH-SR 325
              F     +  ++ M+ E      L  I + +         +  +  ++   DY+H   
Sbjct: 86  LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC 145

Query: 326 NIIYRDLKPENLLLSTSGY------VKLVDFGFAKKLIGPRY 361
            II+ D+KPEN+L+           +K+ D G A        
Sbjct: 146 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT 187

>d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]} Length = 136

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 8/95 (8%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +  G+ +I+QG  GD F++I +G++ V +    +T             FGE AL     R
Sbjct: 48  FIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEG------GSFGELALIYGTPR 101

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK 128
            A + A     V    ID++++ +++      + K
Sbjct: 102 AATVKAKTN--VKLWGIDRDSYRRILMGSTLRKRK 134

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 54.4 bits (130), Expect = 2e-09
 Identities = 19/131 (14%), Positives = 40/131 (30%), Gaps = 4/131 (3%)

Query: 230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCL 289
           K+        +  +        H               + KL      K Y +    + +
Sbjct: 30  KFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE--GNAV 87

Query: 290 GGELWTILRDKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVD 349
             EL           +         ++E     + R I++ DL   N+L+S  G + ++D
Sbjct: 88  LMELIDAKELYRVRVE-NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIID 145

Query: 350 FGFAKKLIGPR 360
           F  + ++    
Sbjct: 146 FPQSVEVGEEG 156

>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 136

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.8 bits (126), Expect = 3e-09
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
            KEG+++I QG  GD F++I +G   + +K                  FGE AL  +  R
Sbjct: 44  VKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYD--NRGSFGELALMYNTPR 101

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIR 126
            A I A  P   +   +D+ TF ++I   +  +
Sbjct: 102 AATITATSP--GALWGLDRVTFRRIIVKNNAKK 132

>d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Cyclic AMP receptor-like protein Vfr
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.1 bits (124), Expect = 5e-09
 Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 4/116 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           Y     II  G R +T F I KG V + + + +   E  I  L  GDFFGE  L   +  
Sbjct: 17  YTAKSTIIYAGDRCETLFFIIKGSVTI-LIEDDDGREMIIGYLNSGDFFGELGLFEKEGS 75

Query: 94  TANIV--AADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSL 146
                             I    F +L     EI      + ++R R+   +   L
Sbjct: 76  EQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDL 131

>d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]} Length = 133

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Putative ion channel CnbD
species: Mesorhizobium loti [TaxId: 381]

 Score = 48.6 bits (115), Expect = 7e-08
 Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 3   KNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTM 62
           +N +L         +   V++ IV          G  I R G  GD  F + +G V V  
Sbjct: 8   RNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVAT 67

Query: 63  KQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSL 122
                        L  G FFGE AL   + R+A + AA    VS L +    F  L SS 
Sbjct: 68  --------PNPVELGPGAFFGEMALISGEPRSATVSAATT--VSLLSLHSADFQMLCSSS 117

Query: 123 DEIRTKYVDETSERR 137
            EI   +     ERR
Sbjct: 118 PEIAEIFRKTALERR 132

>d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]} Length = 142

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Transcriptional regulator PG0396, N-terminal domain
species: Porphyromonas gingivalis [TaxId: 837]

 Score = 46.0 bits (108), Expect = 7e-07
 Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 4/114 (3%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
            K+   +  +G   +  F + +GK+K+  +          R +  G FFG +    ++  
Sbjct: 29  CKKASTVFSEGDIPNNLFYLYEGKIKILREGVY-GRFHISRIVKPGQFFGMRPYFAEETC 87

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSL 146
           ++  +A +      L I  E    L+         ++   ++          +L
Sbjct: 88  SSTAIAVEN--SKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTL 139

>d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 129

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: CRP-like transcriptional regulator TM1171, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.3 bits (98), Expect = 1e-05
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 3/114 (2%)

Query: 34  YKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR 93
           +++G+ +  Q    +   I+ +G +K      N    +                  +   
Sbjct: 15  FRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRF 74

Query: 94  TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER-RRLNEEFRSL 146
             N+VA +   +    I +E F  L+    E+   ++ + SE  R ++E+   L
Sbjct: 75  PVNVVAGENSKILS--IPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFL 126

>d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 155

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory domain of Epac2, domains 1 and 3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 4/109 (3%)

Query: 18  NQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQ-PNSTEEKYIRTL 76
           +  ++  I         ++G  + RQG  G  ++ +  G + V + +  +  +   I TL
Sbjct: 36  HPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTL 95

Query: 77  YKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI 125
             G  FGE  L     R A IV  +      L I+QE F  L     + 
Sbjct: 96  GIGTAFGESILDNTP-RHATIVTRES--SELLRIEQEDFKALWEKYRQY 141

>d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]} Length = 193

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: HCN pacemaker channel
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (95), Expect = 6e-05
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 13  FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKY 72
                +   +  ++       ++ GDYIIR+G  G   + I  G V         T+   
Sbjct: 75  LFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVS------VLTKGNK 128

Query: 73  IRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDE 132
              L  G +FGE  L     RTA++ A          +  + FN+++     +R  +   
Sbjct: 129 EMKLSDGSYFGEICLLTRGRRTASVRADTY--CRLYSLSVDNFNEVLEEYPMMRRAFETV 186

Query: 133 TSERRR 138
             +R  
Sbjct: 187 AIDRLD 192

>d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 137

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Probable cyclic nucleotide-gated ion channel 6
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 7/111 (6%)

Query: 17  VNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTL 76
           +++ ++  I        + E  Y++R+G   +    I +G+++        +       L
Sbjct: 17  MDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLL 76

Query: 77  YKGDFFGEKALQGDDLRTANIVAADP-------EGVSCLVIDQETFNQLIS 120
            +GDF G++ L       +                V    +  +    + S
Sbjct: 77  KEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVAS 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	362
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.98
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.98
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1ne6a2	132	Regulatory subunit of Protein kinase A {Cow (Bos t	99.92
d1cx4a1	136	Regulatory subunit of Protein kinase A {Rat (Rattu	99.9
d1ne6a1	136	Regulatory subunit of Protein kinase A {Cow (Bos t	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d1cx4a2	147	Regulatory subunit of Protein kinase A {Rat (Rattu	99.9
d1zyba2	147	Probable transcription regulator BT4300, N-termina	99.89
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.88
d1wgpa_	137	Probable cyclic nucleotide-gated ion channel 6 {Th	99.88
d1vp6a_	133	Putative ion channel CnbD {Mesorhizobium loti [Tax	99.87
d2gaua2	142	Transcriptional regulator PG0396, N-terminal domai	99.86
d1o7fa2	155	Regulatory domain of Epac2, domains 1 and 3 {Mouse	99.86
d1o7fa3	124	Regulatory domain of Epac2, domains 1 and 3 {Mouse	99.86
d2oz6a2	134	Cyclic AMP receptor-like protein Vfr {Pseudomonas	99.85
d1i5za2	132	Catabolite gene activator protein, N-terminal doma	99.84
d1q3ea_	193	HCN pacemaker channel {Mouse (Mus musculus) [TaxId	99.82
d1o5la1	129	CRP-like transcriptional regulator TM1171, N-termi	99.82
d3e5ua2	139	Chlorophenol reduction protein CprK {Desulfitobact	99.81
d1ft9a2	132	CO-sensing protein CooA, N-terminal domain {Rhodos	99.79
d2zcwa2	112	Transcriptional regulator TTHA1359, N-terminal dom	99.77
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.55
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.93
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.87
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.73
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.36
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.1
d2bgca2	131	Listeriolysin regulatory protein PrfA, N-terminal	93.84
d1ne6a2	132	Regulatory subunit of Protein kinase A {Cow (Bos t	92.24
d1yhfa1	112	Hypothetical protein SPy1581 {Streptococcus pyogen	91.47
d2b8ma1	108	Hypothetical protein MJ0764 {Archaeon Methanococcu	90.36
d1cx4a2	147	Regulatory subunit of Protein kinase A {Rat (Rattu	88.75
d1o5ua_	88	Hypothetical protein TM1112 {Thermotoga maritima [	88.68
d1v70a_	105	Hypothetical protein TTHA0104 {Thermus thermophilu	86.23
d1fxza2	174	Seed storage 7S protein {Soybean (Glycine max), pr	85.62
d1od5a2	173	Seed storage 7S protein {Soybean (Glycine max), gl	85.2
d1o7fa3	124	Regulatory domain of Epac2, domains 1 and 3 {Mouse	84.86
d1cx4a1	136	Regulatory subunit of Protein kinase A {Rat (Rattu	83.99
d1vj2a_	114	Hypothetical protein TM1459 {Thermotoga maritima [	83.59
d1o4ta_	115	Hypothetical protein TM1287 {Thermotoga maritima [	82.52
g1dgw.1	168	Seed storage 7S protein {Jack bean (Canavalia ensi	82.1
d2phla2	162	Seed storage 7S protein {French bean (Phaseolus vu	80.18

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-36  Score=263.30  Aligned_cols=156  Identities=31%  Similarity=0.519  Sum_probs=140.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.||+|++.+..                                       
T Consensus         4 ~l~dy~i~~~iG~G~fg~Vy~~~~~-~~~~~vAiK~i~~~~---------------------------------------   43 (263)
T d2j4za1           4 ALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQ---------------------------------------   43 (263)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHH---------------------------------------
T ss_pred             chhHeEEEEEEecCCCcEEEEEEEC-CCCcEEEEEEEchHH---------------------------------------
Confidence            4689999999999999999999965 568899999986541                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       .........+.+|+.+++.++||||+++++++.+++.+|+||||+++|+|.+++.+.+.+++.
T Consensus        44 -----------------~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~  106 (263)
T d2j4za1          44 -----------------LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ  106 (263)
T ss_dssp             -----------------HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             -----------------ccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHH
Confidence                             111223456789999999999999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+...+.
T Consensus       107 ~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1         107 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            99999999999999999999999999999999999999999999999877554

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-36  Score=264.94  Aligned_cols=151  Identities=28%  Similarity=0.460  Sum_probs=134.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++.+.||+|+||.||++.+. .+++.+|+|.+.+...                                       
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~~---------------------------------------   43 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRA---------------------------------------   43 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC-----------------------------------------
T ss_pred             CcceEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEehhhc---------------------------------------
Confidence            678999999999999999999965 4588999999865310                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                         ....+.+.+|+.+|+.++||||+++++++.+++.+|+||||+++|+|.+++.+.+.+++..
T Consensus        44 -------------------~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~  104 (271)
T d1nvra_          44 -------------------VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD  104 (271)
T ss_dssp             ------------------------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHH
T ss_pred             -------------------chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHH
Confidence                               1122457899999999999999999999999999999999999999999998878899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       105 ~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_         105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             HHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            99999999999999999999999999999999999999999999998763

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-35  Score=267.22  Aligned_cols=156  Identities=34%  Similarity=0.637  Sum_probs=140.9

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      +.+++|++++.||+|+||.||++.+. .+++.||+|++.+...                                     
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~i~k~~~-------------------------------------   43 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVI-------------------------------------   43 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHH-------------------------------------
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEchhhc-------------------------------------
Confidence            35789999999999999999999855 5688999999976421                                     


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCH
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDD  305 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  305 (362)
                                         .......++.+|+.+|+.++||||+++++++.+++.+|+||||++||+|.+++.+.+.+++
T Consensus        44 -------------------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e  104 (337)
T d1o6la_          44 -------------------IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE  104 (337)
T ss_dssp             -------------------HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCH
T ss_pred             -------------------cCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcH
Confidence                               1222346688999999999999999999999999999999999999999999999889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       105 ~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_         105 ERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             HHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999999999999999999999999999999999999999999987654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-35  Score=261.10  Aligned_cols=153  Identities=39%  Similarity=0.653  Sum_probs=138.0

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||+|+||.||++.+. .+++.||+|++.+...                                       
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~---------------------------------------   46 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHI---------------------------------------   46 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH---------------------------------------
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehHHc---------------------------------------
Confidence            367999999999999999999965 4588999999876421                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       ........+.+|+++|+.++||||+++++++.+++.+|+||||++||+|.+++...+.+++..
T Consensus        47 -----------------~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~  109 (288)
T d1uu3a_          47 -----------------IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC  109 (288)
T ss_dssp             -----------------HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             -----------------cCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHH
Confidence                             112234568899999999999999999999999999999999999999999999888999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus       110 ~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_         110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecc
Confidence            99999999999999999999999999999999999999999999998764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-34  Score=261.62  Aligned_cols=156  Identities=41%  Similarity=0.767  Sum_probs=140.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++++.||+|+||.||++++. .+++.||+|++.+...                                      
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~-~~g~~vAvK~i~~~~~--------------------------------------   42 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIV--------------------------------------   42 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH--------------------------------------
T ss_pred             chhHeEEEEEEecCcCcEEEEEEEC-CCCCEEEEEEEchHHc--------------------------------------
Confidence            3678999999999999999999965 5688999999875411                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ......+.+.+|+.+|+.++||||+++++++.+++.+|+||||++|++|..++.....+++.
T Consensus        43 ------------------~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~  104 (316)
T d1fota_          43 ------------------VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP  104 (316)
T ss_dssp             ------------------HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHH
T ss_pred             ------------------cCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccccccccccccccc
Confidence                              11223466889999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus       105 ~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_         105 VAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             HHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            99999999999999999999999999999999999999999999999987544

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-34  Score=258.25  Aligned_cols=150  Identities=27%  Similarity=0.434  Sum_probs=134.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|++++.||+|+||.||++.+. .+++.||+|.+.+.+                                         
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~-~~~~~vAvK~~~~~~-----------------------------------------   57 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQ-----------------------------------------   57 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBT-TTCCEEEEEEEEGGG-----------------------------------------
T ss_pred             cccEEEEEEecCcCcEEEEEEEC-CCCCEEEEEEEeccc-----------------------------------------
Confidence            47999999999999999999855 558899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                        ....+.+.+|+.+|+.++||||+++++++.+++.+|+||||++||+|.+++.+ +.+++..+
T Consensus        58 ------------------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~  118 (293)
T d1yhwa1          58 ------------------QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQI  118 (293)
T ss_dssp             ------------------CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHH
T ss_pred             ------------------ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHH
Confidence                              11234588999999999999999999999999999999999999999998765 57999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus       119 ~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1         119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             HHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence            999999999999999999999999999999999999999999999987543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=263.53  Aligned_cols=151  Identities=28%  Similarity=0.454  Sum_probs=136.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++++.||+|+||.||++.+. .+++.||+|.+.+..                                       
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~---------------------------------------   43 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEI---------------------------------------   43 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEET-TTTEEEEEEEEECCC---------------------------------------
T ss_pred             CccCCEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEChhh---------------------------------------
Confidence            4578999999999999999999855 568899999986431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                         ......++.+|+.+|+.++||||++++++|.+++.+|+||||++||+|.+++.+.+.+++.
T Consensus        44 -------------------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~  104 (322)
T d1s9ja_          44 -------------------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ  104 (322)
T ss_dssp             -------------------CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHH
T ss_pred             -------------------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHH
Confidence                               1223456889999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        307 TTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      .++.++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+|+.+
T Consensus       105 ~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  155 (322)
T d1s9ja_         105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  155 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence            999999999999999997 59999999999999999999999999999865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-34  Score=254.96  Aligned_cols=148  Identities=30%  Similarity=0.484  Sum_probs=133.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|++++.||+|+||.||++.+. .+++.+|+|.+.+..                                         
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~-----------------------------------------   49 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKS-----------------------------------------   49 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECSS-----------------------------------------
T ss_pred             cCeEEeEEEeeCCCcEEEEEEEC-CCCeEEEEEEECcCC-----------------------------------------
Confidence            46899999999999999999965 568899999986431                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDAT  307 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~  307 (362)
                                        ....+.+.+|+++|+.++||||+++++++.+++.+|+||||+++|+|.+++.+ .+++++..
T Consensus        50 ------------------~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~  111 (288)
T d2jfla1          50 ------------------EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ  111 (288)
T ss_dssp             ------------------SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHH
T ss_pred             ------------------HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHH
Confidence                              12335688999999999999999999999999999999999999999998765 45699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                      ++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+
T Consensus       112 ~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~  160 (288)
T d2jfla1         112 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN  160 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhcc
Confidence            9999999999999999999999999999999999999999999999765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.3e-34  Score=260.66  Aligned_cols=156  Identities=46%  Similarity=0.828  Sum_probs=140.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++++.||+|+||.||++.+. .+++.||+|++.+...                                      
T Consensus        39 ~ld~y~i~~~lG~G~fg~Vy~a~~~-~~g~~~AvK~i~~~~~--------------------------------------   79 (350)
T d1rdqe_          39 QLDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKV--------------------------------------   79 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHH--------------------------------------
T ss_pred             CccCeEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEchHHc--------------------------------------
Confidence            5789999999999999999999965 5688999999865411                                      


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                        ......+.+.+|+.+|+.++||||+++++++.+...+|+||||+.+|+|.+++.+.+.+++.
T Consensus        80 ------------------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~  141 (350)
T d1rdqe_          80 ------------------VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP  141 (350)
T ss_dssp             ------------------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHH
T ss_pred             ------------------cCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcCCCCHH
Confidence                              11223456889999999999999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.+.
T Consensus       142 ~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            99999999999999999999999999999999999999999999999987654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.8e-34  Score=257.61  Aligned_cols=152  Identities=27%  Similarity=0.379  Sum_probs=135.7

Q ss_pred             CcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhh
Q psy14740        150 DLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRT  229 (362)
Q Consensus       150 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~  229 (362)
                      .|+.++.||+|+||.||++.+. .+++.||+|.+.+..                                          
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~------------------------------------------   52 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSG------------------------------------------   52 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEECCS------------------------------------------
T ss_pred             hcEeeEEEecCCCeEEEEEEEC-CCCcEEEEEEEchhh------------------------------------------
Confidence            4899999999999999999865 458899999986541                                          


Q ss_pred             hccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHH
Q psy14740        230 KYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTR  309 (362)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  309 (362)
                                    .......+.+.+|+.+|+.++||||+++++++.+++.+|+|||||++|+|..++...+++++..++
T Consensus        53 --------------~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~  118 (309)
T d1u5ra_          53 --------------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA  118 (309)
T ss_dssp             --------------SCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHH
T ss_pred             --------------ccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHH
Confidence                          122334466889999999999999999999999999999999999999998877777889999999


Q ss_pred             HHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        310 FYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       310 ~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       119 ~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_         119 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             HHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            9999999999999999999999999999999999999999999986643

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.3e-33  Score=251.50  Aligned_cols=160  Identities=24%  Similarity=0.371  Sum_probs=139.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.+|+|++.+.......                                   
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~~~AvK~i~~~~~~~~~-----------------------------------   45 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFS-----------------------------------   45 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTCC-----------------------------------
T ss_pred             cccCEEceEEecCcCeEEEEEEEC-CCCCEEEEEEEecccccchh-----------------------------------
Confidence            468999999999999999999854 56889999998765211000                                   


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                     ..........+.+|+.+++.++ ||||+++++++.+++.+|+||||+++|+|.+++..++++++.
T Consensus        46 ---------------~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~  110 (277)
T d1phka_          46 ---------------AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK  110 (277)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHH
Confidence                           0011223456889999999996 999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       111 ~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_         111 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence            9999999999999999999999999999999999999999999999998754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-33  Score=250.77  Aligned_cols=157  Identities=25%  Similarity=0.391  Sum_probs=137.8

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.||+|++.+.....                                      
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~-~~~~~~AvK~i~~~~~~~--------------------------------------   50 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKS--------------------------------------   50 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTT--------------------------------------
T ss_pred             cCEEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEEhhhcch--------------------------------------
Confidence            46999999999999999999965 568899999997652211                                      


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                     .......+.+.+|+.+|+.++||||+++++++.+++.+|+||||+++|+|.+++.+.+.+++..+
T Consensus        51 ---------------~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~  115 (293)
T d1jksa_          51 ---------------SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA  115 (293)
T ss_dssp             ---------------CSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             ---------------hhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHH
Confidence                           11122346688999999999999999999999999999999999999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC----cEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG----YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~----~~kl~DFG~a~~~~~~  359 (362)
                      +.++.|++.||.|||+++|+||||||+|||++.++    .+||+|||+|+.+..+
T Consensus       116 ~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~  170 (293)
T d1jksa_         116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG  170 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTS
T ss_pred             HHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCC
Confidence            99999999999999999999999999999998766    5999999999887543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-33  Score=254.64  Aligned_cols=151  Identities=27%  Similarity=0.417  Sum_probs=125.2

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      +.|++.+.||+|+||.||++.+. .+++.||+|.+.+...                                        
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~----------------------------------------   47 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKKAL----------------------------------------   47 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEET-TTCCEEEEEEEEC-------------------------------------------
T ss_pred             cceEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEchHHh----------------------------------------
Confidence            45999999999999999999865 5688999999875411                                        


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATT  308 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  308 (362)
                                        ......+.+|+.+|+.++||||+++++++.+++.+|+||||++||+|.+++.+.+.+++..+
T Consensus        48 ------------------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~  109 (307)
T d1a06a_          48 ------------------EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA  109 (307)
T ss_dssp             -------------------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHH
T ss_pred             ------------------hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHH
Confidence                              11124467899999999999999999999999999999999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEec---CCCcEEEEecccceecCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLS---TSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~---~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.|++.||.|||++||+||||||+|||+.   .++.+||+|||+|+....
T Consensus       110 ~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_         110 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             HHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999999999999999999999999995   478999999999986643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.6e-33  Score=258.97  Aligned_cols=159  Identities=29%  Similarity=0.514  Sum_probs=135.9

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.||+|++.+.....                                    
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~-~t~~~vAiK~i~~~~~~~------------------------------------   44 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKM------------------------------------   44 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHH------------------------------------
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEEC-CCCCEEEEEEEchHHcch------------------------------------
Confidence            5789999999999999999999955 568899999986542100                                    


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       ............|+.+++.++||||+++++++.+++.+|+||||++||+|.+++.+...+++.
T Consensus        45 -----------------~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~  107 (364)
T d1omwa3          45 -----------------KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA  107 (364)
T ss_dssp             -----------------HTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHH
T ss_pred             -----------------hhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHH
Confidence                             000111222344577778889999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus       108 ~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3         108 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             HHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence            99999999999999999999999999999999999999999999999987543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.3e-33  Score=256.99  Aligned_cols=153  Identities=25%  Similarity=0.418  Sum_probs=135.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++++.||+|+||.||++.+. .+++.||+|++.+..                                       
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~---------------------------------------   66 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPY---------------------------------------   66 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCS---------------------------------------
T ss_pred             cccceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEECCcc---------------------------------------
Confidence            3567999999999999999999865 458899999986531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                          ......+.+|+.+|+.++||||++++++|.+++.+|+||||++||+|.+.+...+ ++++
T Consensus        67 --------------------~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e  126 (352)
T d1koba_          67 --------------------PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE  126 (352)
T ss_dssp             --------------------HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCH
T ss_pred             --------------------hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCH
Confidence                                1123457889999999999999999999999999999999999999999876544 6999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEec--CCCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLS--TSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~--~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.||+.||.|||++||+||||||+|||++  .++.+||+|||+|+.+...
T Consensus       127 ~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         127 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence            99999999999999999999999999999999998  5789999999999987654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.7e-34  Score=254.10  Aligned_cols=152  Identities=24%  Similarity=0.385  Sum_probs=135.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+. .+++.||+|.+.+..                                       
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~---------------------------------------   54 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDT---------------------------------------   54 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEG-GGTEEEEEEECCTTC---------------------------------------
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEEC-CCCeEEEEEEECCcc---------------------------------------
Confidence            4568999999999999999999865 457889999875431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           ...+++.+|+.+|+.++||||+++++++.+++.+|+||||+++|+|.+++...  ..++
T Consensus        55 ---------------------~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~  113 (287)
T d1opja_          55 ---------------------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS  113 (287)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSC
T ss_pred             ---------------------chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchH
Confidence                                 12345889999999999999999999999999999999999999999998754  4689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+.+.
T Consensus       114 ~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_         114 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCC
Confidence            9999999999999999999999999999999999999999999999999876543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=249.80  Aligned_cols=153  Identities=28%  Similarity=0.489  Sum_probs=126.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++.+.||+|+||.||++.+. .+++.||+|.+.+...                                       
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~---------------------------------------   42 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSM---------------------------------------   42 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCTTS---------------------------------------
T ss_pred             chhCEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEChhhC---------------------------------------
Confidence            578999999999999999999855 4688999999865411                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--cceEEEEEeccCCcchHHHHHh----cC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRD----KG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~  301 (362)
                                        .....+.+.+|+.+|+.++||||+++++++.+  ++.+|+||||+++|+|.+++.+    .+
T Consensus        43 ------------------~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~  104 (269)
T d2java1          43 ------------------TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ  104 (269)
T ss_dssp             ------------------CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTC
T ss_pred             ------------------CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCC
Confidence                              12234568899999999999999999998854  4669999999999999999864    35


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC-----cEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRN-----IIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~-----iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..++.++.|++.||.|||+++     |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       105 ~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  166 (269)
T d2java1         105 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH  166 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeeccc
Confidence            6999999999999999999999976     99999999999999999999999999987643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.3e-33  Score=256.04  Aligned_cols=153  Identities=27%  Similarity=0.426  Sum_probs=135.2

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++.+.||+|+||.||++.+. .+++.||+|.+.+..                                       
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~-~~g~~vAvK~i~~~~---------------------------------------   63 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPH---------------------------------------   63 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECCCS---------------------------------------
T ss_pred             CccCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEcccc---------------------------------------
Confidence            3578999999999999999999865 568899999986531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~  305 (362)
                                          ....+.+.+|+.+|+.++||||+++++++.+++.+|+||||++||+|.+++.+ .+.+++
T Consensus        64 --------------------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e  123 (350)
T d1koaa2          64 --------------------ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE  123 (350)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCH
T ss_pred             --------------------hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCH
Confidence                                12235678999999999999999999999999999999999999999999854 457999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC--CCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST--SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~--~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+|+.+...
T Consensus       124 ~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         124 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            999999999999999999999999999999999964  678999999999987543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-33  Score=251.68  Aligned_cols=151  Identities=25%  Similarity=0.394  Sum_probs=134.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+.+.||+|+||.||++.+. .+++.||+|.+.+..                                        
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~-~~~~~~AiK~i~~~~----------------------------------------   42 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVKG----------------------------------------   42 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCT----------------------------------------
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEcCCc----------------------------------------
Confidence            678999999999999999999855 568899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~  306 (362)
                                          .....+.+|+.+|+.++||||++++++|.+++.+|+|||||+|++|.+++...+ ++++.
T Consensus        43 --------------------~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~  102 (321)
T d1tkia_          43 --------------------TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNER  102 (321)
T ss_dssp             --------------------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHH
T ss_pred             --------------------ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHH
Confidence                                112347789999999999999999999999999999999999999999998654 69999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCC--CcEEEEecccceecCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTS--GYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~--~~~kl~DFG~a~~~~~~  359 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.+  +.+||+|||+++.....
T Consensus       103 ~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_         103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            999999999999999999999999999999999854  57999999999887543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=244.64  Aligned_cols=149  Identities=24%  Similarity=0.383  Sum_probs=129.7

Q ss_pred             cEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        151 LRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       151 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |++...||+|+||.||++.+. .+++.+|+|.+....                                           
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~-~~~~~va~K~i~~~~-------------------------------------------   46 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRK-------------------------------------------   46 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGG-------------------------------------------
T ss_pred             EEeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhh-------------------------------------------
Confidence            367788999999999999865 457889999886531                                           


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                    ......+.+.+|+++|+.++||||+++++++.+    +..+|+||||+++|+|.+++.+.+.+++.
T Consensus        47 --------------~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~  112 (270)
T d1t4ha_          47 --------------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIK  112 (270)
T ss_dssp             --------------SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             --------------CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHH
Confidence                          112234568899999999999999999999864    45689999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCC--cEeecCCCCcEEec-CCCcEEEEecccceecC
Q psy14740        307 TTRFYTACVVEAFDYLHSRN--IIYRDLKPENLLLS-TSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~--iiHrDikp~NIl~~-~~~~~kl~DFG~a~~~~  357 (362)
                      .++.++.|++.||.|||+++  |+||||||+|||++ .++.+||+|||+|+...
T Consensus       113 ~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_         113 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            99999999999999999999  99999999999996 57899999999997543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=250.46  Aligned_cols=154  Identities=32%  Similarity=0.594  Sum_probs=135.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|.+.+.||+|+||.||++.+. .+++.||+|++.+...                                       
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~-~t~~~vAvK~i~k~~~---------------------------------------   40 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVV---------------------------------------   40 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHH---------------------------------------
T ss_pred             CCCeEEeeEEecCCCcEEEEEEEC-CCCCEEEEEEEchhhc---------------------------------------
Confidence            478999999999999999999965 5688999999876421                                       


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHh-hcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMG-EANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~-~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~  306 (362)
                                       ........+..|..++. .++||||+++++++.+++.+|+||||+++|+|.+++.....+++.
T Consensus        41 -----------------~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~  103 (320)
T d1xjda_          41 -----------------LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS  103 (320)
T ss_dssp             -----------------HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             -----------------cChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHH
Confidence                             11223345667777665 689999999999999999999999999999999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       104 ~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_         104 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccc
Confidence            9999999999999999999999999999999999999999999999987643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=1.1e-32  Score=248.39  Aligned_cols=155  Identities=24%  Similarity=0.368  Sum_probs=126.8

Q ss_pred             ccccCcEEEEEecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ...++|++.+.||+|+||.||++.+....+.  .+|+|.+...                                     
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-------------------------------------   65 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-------------------------------------   65 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS-------------------------------------
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc-------------------------------------
Confidence            3467899999999999999999986543222  4677766432                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                           ......+.+.+|+.+|+.++||||+++++++..++.+|+||||+++|+|.+++... +.
T Consensus        66 ---------------------~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~  124 (299)
T d1jpaa_          66 ---------------------YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ  124 (299)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTC
T ss_pred             ---------------------cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCC
Confidence                                 12233456899999999999999999999999999999999999999999988764 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+.+
T Consensus       125 l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         125 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            99999999999999999999999999999999999999999999999999987643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.6e-32  Score=243.00  Aligned_cols=149  Identities=26%  Similarity=0.382  Sum_probs=127.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||+|+||.||++.+.  +++.||+|.+.+..                                        
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~i~~~~----------------------------------------   41 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGA----------------------------------------   41 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET--TTEEEEEEECCSSS----------------------------------------
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC--CCCEEEEEEECCCc----------------------------------------
Confidence            368999999999999999999865  35679999886431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~  306 (362)
                                          ...+.+.+|+.+++.++||||+++++++..++.+|+||||+++|+|.+++... ..+++.
T Consensus        42 --------------------~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~  101 (263)
T d1sm2a_          42 --------------------MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE  101 (263)
T ss_dssp             --------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHH
T ss_pred             --------------------CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHH
Confidence                                12245889999999999999999999999999999999999999999988754 458899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+.+
T Consensus       102 ~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  153 (263)
T d1sm2a_         102 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  153 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-------
T ss_pred             HHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccC
Confidence            9999999999999999999999999999999999999999999999987644

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.7e-32  Score=245.00  Aligned_cols=152  Identities=24%  Similarity=0.392  Sum_probs=128.9

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++++.||+|+||.||++.+. .+++.||+|++....                                        
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~----------------------------------------   39 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDT----------------------------------------   39 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEC-------------------------------------------
T ss_pred             CCCCEeccEEecCcCeEEEEEEEC-CCCCEEEEEEEehhh----------------------------------------
Confidence            468999999999999999999965 457899999986431                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHH-h-cCCCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILR-D-KGNFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~-~~~l~~  305 (362)
                                       .......++.+|+.+|+.++||||+++++++.+++.+|+||||+.+ ++.+++. . .+.+++
T Consensus        40 -----------------~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e  101 (298)
T d1gz8a_          40 -----------------ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL  101 (298)
T ss_dssp             ---------------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCH
T ss_pred             -----------------cChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chhhhhhhhcccCCCH
Confidence                             1112345688999999999999999999999999999999999955 5444443 3 346999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       102 ~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_         102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccC
Confidence            99999999999999999999999999999999999999999999999976643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.6e-32  Score=241.01  Aligned_cols=146  Identities=25%  Similarity=0.397  Sum_probs=126.4

Q ss_pred             EEecccceecEEEEEec-CCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhccc
Q psy14740        155 TTLGVGGFGRVELVQIA-GDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVD  233 (362)
Q Consensus       155 ~~lg~G~~g~v~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~~  233 (362)
                      +.||+|+||.||++.+. ...++.||+|.+....                                              
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~----------------------------------------------   46 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA----------------------------------------------   46 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------------------------------------------------
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh----------------------------------------------
Confidence            46999999999999754 3445789999985431                                              


Q ss_pred             hhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHH
Q psy14740        234 ETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTA  313 (362)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~  313 (362)
                                 .+....+.+.+|+.+|++++||||+++++++..+ ..|+||||+++|+|.+++.+..++++..+..++.
T Consensus        47 -----------~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~  114 (277)
T d1xbba_          47 -----------NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVH  114 (277)
T ss_dssp             -------------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHH
T ss_pred             -----------CCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHH
Confidence                       1223346789999999999999999999998654 5789999999999999999888899999999999


Q ss_pred             HHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        314 CVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       314 ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      |++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       115 qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~  159 (277)
T d1xbba_         115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  159 (277)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             HHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccc
Confidence            999999999999999999999999999999999999999987654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=240.14  Aligned_cols=151  Identities=28%  Similarity=0.429  Sum_probs=129.2

Q ss_pred             cCcEEEEE-ecccceecEEEEEecC-CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        149 SDLRVITT-LGVGGFGRVELVQIAG-DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       149 ~~~~~~~~-lg~G~~g~v~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      +++.+.+. ||+|+||.||++.+.. ..+..||||.+.+.                                        
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~----------------------------------------   47 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----------------------------------------   47 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----------------------------------------
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh----------------------------------------
Confidence            56778875 9999999999997643 23457999998643                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                        ......+.+.+|+.+|+.++||||+++++++..+ .+|+||||+++|+|.+++... ..+++
T Consensus        48 ------------------~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~~l~~  108 (285)
T d1u59a_          48 ------------------TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPV  108 (285)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHTTCTTTSCH
T ss_pred             ------------------cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-eEEEEEEeCCCCcHHHHhhccccCCCH
Confidence                              1123346689999999999999999999998654 589999999999999987654 56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       109 ~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_         109 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccc
Confidence            99999999999999999999999999999999999999999999999998754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-32  Score=246.08  Aligned_cols=151  Identities=25%  Similarity=0.363  Sum_probs=127.5

Q ss_pred             EEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhcc
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  232 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~~  232 (362)
                      .++.||+|+||.||++.+. .+++.||+|++.....                                            
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~--------------------------------------------   36 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHR--------------------------------------------   36 (299)
T ss_dssp             EEEEEEEETTEEEEEEECS-SCCSEEEEEEC-------------------------------------------------
T ss_pred             cceEeccCcCeEEEEEEEC-CCCcEEEEEEEehhhh--------------------------------------------
Confidence            4678999999999999854 5688999999865421                                            


Q ss_pred             chhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHH
Q psy14740        233 DETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYT  312 (362)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  312 (362)
                                ..........+.+|+.+|+.++||||+++++++.+++.+|+||||+.++++..+......+++..++.++
T Consensus        37 ----------~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~  106 (299)
T d1ua2a_          37 ----------SEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM  106 (299)
T ss_dssp             -----------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHH
T ss_pred             ----------hhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHH
Confidence                      0111223456889999999999999999999999999999999999888887777666779999999999


Q ss_pred             HHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        313 ACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       313 ~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       107 ~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~  152 (299)
T d1ua2a_         107 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  152 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             HHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCC
Confidence            9999999999999999999999999999999999999999987654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-32  Score=241.19  Aligned_cols=150  Identities=24%  Similarity=0.393  Sum_probs=130.4

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+.  +++.||+|.+.+..                                       
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~---------------------------------------   49 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGS---------------------------------------   49 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTS---------------------------------------
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEEC--CCCEEEEEEEccCc---------------------------------------
Confidence            4478999999999999999999865  35689999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--CCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--GNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~  304 (362)
                                           ...+.+.+|+.+|+.++||||+++++++.+ +.+|+||||+++|+|.+++...  .+++
T Consensus        50 ---------------------~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~  107 (272)
T d1qpca_          50 ---------------------MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLT  107 (272)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCC
T ss_pred             ---------------------CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCC
Confidence                                 122458899999999999999999998754 5579999999999999977643  3599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      +..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+.+.
T Consensus       108 ~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~  162 (272)
T d1qpca_         108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCC
Confidence            9999999999999999999999999999999999999999999999999987543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.9e-32  Score=245.30  Aligned_cols=153  Identities=25%  Similarity=0.434  Sum_probs=129.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCC----CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPS----RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|++.+.||+|+||.||++.+.+...    ..+|+|.+.+.                                     
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~-------------------------------------   78 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK-------------------------------------   78 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------------------------------------
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccc-------------------------------------
Confidence            4689999999999999999998765332    25777776432                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-  301 (362)
                                           ........+.+|+.+|..+ +||||+++++++.+++.+|+||||+++|+|.+++.... 
T Consensus        79 ---------------------~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~  137 (325)
T d1rjba_          79 ---------------------ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKRE  137 (325)
T ss_dssp             --------------------------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT
T ss_pred             ---------------------cCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccC
Confidence                                 1122345688999999998 89999999999999999999999999999999997532 


Q ss_pred             ----------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 ----------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ----------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                                            .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+....
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~  216 (325)
T d1rjba_         138 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS  216 (325)
T ss_dssp             CC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGG
T ss_pred             CCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccC
Confidence                                  378899999999999999999999999999999999999999999999999987643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=1e-31  Score=239.56  Aligned_cols=152  Identities=26%  Similarity=0.375  Sum_probs=134.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.||+|++.+..                                         
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~-----------------------------------------   44 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDL-RLHRDVAVKVLRADL-----------------------------------------   44 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTT-----------------------------------------
T ss_pred             ceeEEeEEEeeCCCeEEEEEEEC-CCCCEEEEEEEchhh-----------------------------------------
Confidence            56999999999999999999965 458899999987541                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcCCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKGNFD  304 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~l~  304 (362)
                                     ..+......+.+|+.+++.++||||+++++++...+    .+|+||||++|++|.+++...++++
T Consensus        45 ---------------~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~  109 (277)
T d1o6ya_          45 ---------------ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT  109 (277)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCC
T ss_pred             ---------------ccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCC
Confidence                           122334567899999999999999999999987643    4899999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      +..++.++.|++.||.|||++||+||||||+|||++.++..+++|||.++...
T Consensus       110 ~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_         110 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhc
Confidence            99999999999999999999999999999999999999999999999987653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=6.4e-32  Score=242.11  Aligned_cols=153  Identities=27%  Similarity=0.425  Sum_probs=134.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++++.||+|+||.||++.+.  +++.||+|++....                                        
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~i~~~~----------------------------------------   38 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEK----------------------------------------   38 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET--TSCEEEEEEECCSS----------------------------------------
T ss_pred             CCCceeccEEecCCCcEEEEEEeC--CCCEEEEEEEehhh----------------------------------------
Confidence            468999999999999999999864  47899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       .......++.+|+.+|+.++||||+++++++.+++..|++|+++.++.+..+....+.+++..
T Consensus        39 -----------------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~  101 (286)
T d1ob3a_          39 -----------------EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT  101 (286)
T ss_dssp             -----------------GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHH
T ss_pred             -----------------cChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhh
Confidence                             112234668899999999999999999999999999999999997777777777677899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|.....+
T Consensus       102 ~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_         102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             hHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            9999999999999999999999999999999999999999999999776543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-32  Score=241.81  Aligned_cols=149  Identities=24%  Similarity=0.301  Sum_probs=127.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|.+.+.||+|+||.||+++..    ..+|+|++....                                       
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~----~~vAvK~~~~~~---------------------------------------   42 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTA---------------------------------------   42 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESS----SEEEEEECCCSS---------------------------------------
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEEC----CEEEEEEEEccc---------------------------------------
Confidence            4577899999999999999999743    259999986431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCCH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFDD  305 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~  305 (362)
                                        ......+.+.+|+.+|+.++||||++++++.. .+.+|+||||+++|+|.+++... ..+++
T Consensus        43 ------------------~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~  103 (276)
T d1uwha_          43 ------------------PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEM  103 (276)
T ss_dssp             ------------------CCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCCH
T ss_pred             ------------------CCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCCH
Confidence                              11223466889999999999999999999865 45689999999999999999754 56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+...
T Consensus       104 ~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_         104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             HHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            9999999999999999999999999999999999999999999999997653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=237.45  Aligned_cols=157  Identities=24%  Similarity=0.375  Sum_probs=133.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.||+|.+.+......                                     
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~~~~-------------------------------------   45 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDW-------------------------------------   45 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCCE-------------------------------------
T ss_pred             CeEEEeEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehHHccch-------------------------------------
Confidence            57999999999999999999965 4588999999876422110                                     


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCC-cchHHHHHhcCCCCH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLG-GELWTILRDKGNFDD  305 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~l~~  305 (362)
                                      .......++.+|+.+|+.++  ||||+++++++.+++.+|+|||++.+ +++.+++.+.+.+++
T Consensus        46 ----------------~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e  109 (273)
T d1xwsa_          46 ----------------GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE  109 (273)
T ss_dssp             ----------------EECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCH
T ss_pred             ----------------hhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCH
Confidence                            11112244678999999986  89999999999999999999999976 688888888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-CCcEEEEecccceecCCC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|+.....
T Consensus       110 ~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~  164 (273)
T d1xwsa_         110 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT  164 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccc
Confidence            999999999999999999999999999999999985 479999999999876543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=242.69  Aligned_cols=148  Identities=34%  Similarity=0.561  Sum_probs=127.6

Q ss_pred             cccCcEEEE-EecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        147 RLSDLRVIT-TLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       147 ~~~~~~~~~-~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .+++|.++. .||+|+||.||++.+. .+++.||+|++.+.                                       
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~---------------------------------------   48 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDC---------------------------------------   48 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECS---------------------------------------
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEEC-CCCCEEEEEEECCc---------------------------------------
Confidence            467899886 5999999999999965 45889999987542                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhh-cCCcceeeeeeeeec----cceEEEEEeccCCcchHHHHHhc
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGE-ANCDFIVKLYKTFKD----KKYLYMLMESCLGGELWTILRDK  300 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~  300 (362)
                                               ..+.+|+.++.+ .+||||++++++|.+    ..++|+|||||+||+|.+++.+.
T Consensus        49 -------------------------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~  103 (335)
T d2ozaa1          49 -------------------------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR  103 (335)
T ss_dssp             -------------------------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSC
T ss_pred             -------------------------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhc
Confidence                                     235678988765 489999999999865    46799999999999999999864


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCCC
Q psy14740        301 --GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       301 --~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~~  359 (362)
                        ..+++..++.++.|++.||.|||++||+||||||+|||++.   .+.+||+|||+|+.+...
T Consensus       104 ~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1         104 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             SCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCC
Confidence              36999999999999999999999999999999999999985   467999999999877543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=235.50  Aligned_cols=151  Identities=26%  Similarity=0.453  Sum_probs=133.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||+|+||+||++++.  +++.||+|.+.+..                                        
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~----------------------------------------   40 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGS----------------------------------------   40 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET--TTEEEEEEEEESSS----------------------------------------
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC--CCCEEEEEEECcCc----------------------------------------
Confidence            368889999999999999999964  46789999986541                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh-cCCCCHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD-KGNFDDA  306 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~  306 (362)
                                          ...+.+.+|+.+++.++||||+++++++.+++.+|+||||+++|+|.+++.. ...+++.
T Consensus        41 --------------------~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~  100 (258)
T d1k2pa_          41 --------------------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ  100 (258)
T ss_dssp             --------------------SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHH
T ss_pred             --------------------CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHH
Confidence                                1224588999999999999999999999999999999999999999998664 4568999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      .+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+|+.+....
T Consensus       101 ~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_         101 QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             HHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence            999999999999999999999999999999999999999999999998765443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.3e-31  Score=235.40  Aligned_cols=154  Identities=24%  Similarity=0.395  Sum_probs=138.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++++.||+|+||+||++.+. .+++.||+|+++...                                        
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~----------------------------------------   39 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDD----------------------------------------   39 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSC----------------------------------------
T ss_pred             CCCCEeeeEEecCcCeEEEEEEEC-CCCcEEEEEEEehhh----------------------------------------
Confidence            468999999999999999999965 568899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDAT  307 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  307 (362)
                                       .......++.+|+.+|+.++||||+++++++.+.+..+++|+++.+++|..++...+.+++..
T Consensus        40 -----------------~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~  102 (292)
T d1unla_          40 -----------------DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI  102 (292)
T ss_dssp             -----------------SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHH
T ss_pred             -----------------CChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccccccccccccccccchhH
Confidence                             122345678899999999999999999999999999999999999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        308 TRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       308 ~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.|+....+
T Consensus       103 ~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_         103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             HHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCC
Confidence            9999999999999999999999999999999999999999999999987543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-31  Score=235.90  Aligned_cols=154  Identities=25%  Similarity=0.354  Sum_probs=128.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCC---CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPS---RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .-++|.+.+.||+|+||.||++.+....+   ..||+|.+...                                     
T Consensus         5 ~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~-------------------------------------   47 (283)
T d1mqba_           5 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-------------------------------------   47 (283)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-------------------------------------
T ss_pred             CHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc-------------------------------------
Confidence            34678999999999999999998765432   36899987542                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~  302 (362)
                                           ........+.+|+.+|+.++||||+++++++.+.+..+++|||+.++++.+++... +.
T Consensus        48 ---------------------~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~  106 (283)
T d1mqba_          48 ---------------------YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE  106 (283)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTC
T ss_pred             ---------------------cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhccccc
Confidence                                 11223456889999999999999999999999999999999999999999987754 56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       107 ~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  162 (283)
T d1mqba_         107 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  162 (283)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             ccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccC
Confidence            99999999999999999999999999999999999999999999999999987643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-31  Score=234.59  Aligned_cols=154  Identities=31%  Similarity=0.430  Sum_probs=125.5

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCC--ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSR--SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      .++|++.+.||+|+||.||++.....+++  .||+|.+.+..                                      
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~--------------------------------------   48 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV--------------------------------------   48 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------------------------------------
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhh--------------------------------------
Confidence            46899999999999999999987655444  68999886541                                      


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                        .......+.+.+|+.+|+.++||||+++++++.++ .+++||||++++++.+.+... +.++
T Consensus        49 ------------------~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~  109 (273)
T d1u46a_          49 ------------------LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFL  109 (273)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHGGGSC
T ss_pred             ------------------cCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chheeeeeecCcchhhhhhcccCCCC
Confidence                              11223445689999999999999999999999764 578999999999999877653 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.+..
T Consensus       110 ~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_         110 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            999999999999999999999999999999999999999999999999998744

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.5e-31  Score=235.24  Aligned_cols=149  Identities=23%  Similarity=0.386  Sum_probs=127.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++.+..  ++.||+|.+....                                       
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~--~~~vAiK~l~~~~---------------------------------------   53 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT---------------------------------------   53 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTS---------------------------------------
T ss_pred             CHHHEEEeeEEeeCCCeEEEEEEECC--CCEEEEEEECccc---------------------------------------
Confidence            45789999999999999999998653  4579999985431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh--cCCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD--KGNFD  304 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~  304 (362)
                                           ...+.+.+|+.+|+.++||||+++++++.+ +.+|+||||+++|+|..++..  .+.++
T Consensus        54 ---------------------~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~  111 (285)
T d1fmka3          54 ---------------------MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR  111 (285)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCC
T ss_pred             ---------------------CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcccccch
Confidence                                 122568899999999999999999999855 557999999999999988764  35699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       112 ~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~  165 (285)
T d1fmka3         112 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  165 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             HHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccC
Confidence            999999999999999999999999999999999999999999999999986643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6e-31  Score=239.23  Aligned_cols=158  Identities=30%  Similarity=0.609  Sum_probs=139.2

Q ss_pred             ccccCcEEEEEecccceecEEEEEecC--CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        146 LRLSDLRVITTLGVGGFGRVELVQIAG--DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       146 ~~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      ..+++|++++.||+|+||.||++....  .+++.||+|.+.+....                                  
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~----------------------------------   66 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV----------------------------------   66 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE----------------------------------
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhc----------------------------------
Confidence            357889999999999999999998643  35788999998764211                                  


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCC
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                           .+....+.+.+|+.+|++++| |||+++++++.+...+|++|||+.+++|.+++...+.
T Consensus        67 ---------------------~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~  125 (322)
T d1vzoa_          67 ---------------------QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER  125 (322)
T ss_dssp             ---------------------EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC
T ss_pred             ---------------------cchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhccc
Confidence                                 112234567889999999976 8999999999999999999999999999999998888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++..++.++.|++.||.|+|+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       126 ~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence            99999999999999999999999999999999999999999999999999987643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-30  Score=231.09  Aligned_cols=152  Identities=26%  Similarity=0.402  Sum_probs=122.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCC--CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchH
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDP--SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  225 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~  225 (362)
                      -++|++.+.||+|+||.||++.+....  +..+|+|.+...                                       
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~---------------------------------------   46 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---------------------------------------   46 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---------------------------------------
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc---------------------------------------
Confidence            368999999999999999999876443  345777776432                                       


Q ss_pred             HhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-CCCC
Q psy14740        226 EIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-GNFD  304 (362)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~  304 (362)
                                         ........+.+|+.+|+.++||||+++++++. .+.+|+||||+++|+|.+++... ..++
T Consensus        47 -------------------~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~  106 (273)
T d1mp8a_          47 -------------------TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLD  106 (273)
T ss_dssp             -------------------TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSC
T ss_pred             -------------------cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCC
Confidence                               12234466889999999999999999999986 46789999999999999987654 4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        305 DATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       305 ~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+|+.+..
T Consensus       107 ~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_         107 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             HHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            999999999999999999999999999999999999999999999999987643

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.1e-30  Score=235.65  Aligned_cols=152  Identities=27%  Similarity=0.401  Sum_probs=133.2

Q ss_pred             ccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      .++|++++.||+|+||.||+++..+    .+++.||+|.+...                                     
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~-------------------------------------   54 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-------------------------------------   54 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-------------------------------------
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh-------------------------------------
Confidence            4689999999999999999998754    34568999987543                                     


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC--
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG--  301 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--  301 (362)
                                           ......+.+.+|+.+|+.++||||+++++++...+..+++||++++|+|.+++....  
T Consensus        55 ---------------------~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~  113 (301)
T d1lufa_          55 ---------------------ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPH  113 (301)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-
T ss_pred             ---------------------cChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCcc
Confidence                                 112234668999999999999999999999999999999999999999999986422  


Q ss_pred             ----------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        302 ----------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       302 ----------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                            .++...+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~  191 (301)
T d1lufa_         114 TVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  191 (301)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHT
T ss_pred             ccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheecc
Confidence                                  37888999999999999999999999999999999999999999999999998653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-30  Score=235.50  Aligned_cols=155  Identities=26%  Similarity=0.447  Sum_probs=131.4

Q ss_pred             hhccccCcEEEEEecccceecEEEEEecCCCC-CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        144 RSLRLSDLRVITTLGVGGFGRVELVQIAGDPS-RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       144 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      +...+++|++.+.||+|+||.||++.+.+... ..+|+|.+.+.                                    
T Consensus         5 ~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~------------------------------------   48 (309)
T d1fvra_           5 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY------------------------------------   48 (309)
T ss_dssp             SBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------
T ss_pred             CccCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc------------------------------------
Confidence            34567899999999999999999998764322 24677766432                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                            ......+.+.+|+.+|+.+ +||||+++++++.+++.+|+||||+++|+|.+++.+. 
T Consensus        49 ----------------------~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~  106 (309)
T d1fvra_          49 ----------------------ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR  106 (309)
T ss_dssp             ----------------------------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTC
T ss_pred             ----------------------cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhcc
Confidence                                  1122345689999999998 7999999999999999999999999999999998643 


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        301 ---------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       301 ---------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                                     ..+++..+..++.|++.||.|+|+++|+||||||+|||++.++.+||+|||+|+..
T Consensus       107 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~  177 (309)
T d1fvra_         107 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ  177 (309)
T ss_dssp             HHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESS
T ss_pred             ccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccc
Confidence                           45899999999999999999999999999999999999999999999999999754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.9e-30  Score=233.60  Aligned_cols=152  Identities=22%  Similarity=0.384  Sum_probs=125.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCC----ceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSR----SFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      +-++|++++.||+|+||.||++.+.. +++    .+|+|.+...                                    
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~-~~~~~~~~vavK~~~~~------------------------------------   49 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREA------------------------------------   49 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC-----CCEEEEEEEECC-------------------------------------
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcC-CCCEEEEEEEEEEeccc------------------------------------
Confidence            34689999999999999999998654 344    3566655332                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc-C
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK-G  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~  301 (362)
                                            ......+.+.+|+.+++.++||||+++++++.++. .+++|+++.+++|.+.+... .
T Consensus        50 ----------------------~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~~~~  106 (317)
T d1xkka_          50 ----------------------TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD  106 (317)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHTSS
T ss_pred             ----------------------cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-eeEEEEeccCCccccccccccc
Confidence                                  11223456899999999999999999999997654 67788888899999887764 4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       107 ~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_         107 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            699999999999999999999999999999999999999999999999999987643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.3e-30  Score=235.68  Aligned_cols=152  Identities=20%  Similarity=0.383  Sum_probs=126.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++++.||+|+||.||++.+. .+++.||+|.+.+..                                        
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~----------------------------------------   55 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPF----------------------------------------   55 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEET-TTCCEEEEEECSSTT----------------------------------------
T ss_pred             CCcEEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEchhh----------------------------------------
Confidence            468999999999999999999855 568899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc------eEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK------YLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       ......+.+.+|+.+|+.++||||++++++|...+      .+|+||||+ +.+|..+++. +
T Consensus        56 -----------------~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~  116 (346)
T d1cm8a_          56 -----------------QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-E  116 (346)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-C
T ss_pred             -----------------cChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHh-c
Confidence                             12234466889999999999999999999987654      579999999 7788887764 6


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      .+++..++.++.|++.||.|||++||+||||||+|||++.++.+|++|||+|+.....
T Consensus       117 ~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~  174 (346)
T d1cm8a_         117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE  174 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCc
Confidence            7999999999999999999999999999999999999999999999999999887543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-30  Score=235.72  Aligned_cols=147  Identities=27%  Similarity=0.393  Sum_probs=122.1

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|+..+.||+|+||+||++++. .+++.||+|.+.+..                                         
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~-----------------------------------------   57 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDK-----------------------------------------   57 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCS-----------------------------------------
T ss_pred             CCcEeeeEEeeCcCeEEEEEEEC-CCCCEEEEEEECccc-----------------------------------------
Confidence            36899999999999999999965 568899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHH---Hh
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTIL---RD  299 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l---~~  299 (362)
                                            ....+|+.+|+.++||||+++++++..      ..++|+||||++++.+..+.   ..
T Consensus        58 ----------------------~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~  115 (350)
T d1q5ka_          58 ----------------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA  115 (350)
T ss_dssp             ----------------------SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHT
T ss_pred             ----------------------hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhc
Confidence                                  112369999999999999999998843      34689999999655433332   23


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecCCC
Q psy14740        300 KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       300 ~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~~  359 (362)
                      ...+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+|||+|+.+...
T Consensus       116 ~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_         116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence            45699999999999999999999999999999999999999775 8999999999887543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=5.9e-30  Score=233.64  Aligned_cols=147  Identities=23%  Similarity=0.380  Sum_probs=127.5

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++++.||+|+||+||++.+. .+++.||+|++.+.                                        
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~-~~~~~vAiK~i~~~----------------------------------------   71 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKPV----------------------------------------   71 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSS----------------------------------------
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEECHH----------------------------------------
Confidence            4578999999999999999999855 46889999998543                                        


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcC-Ccceeeeeeeeec--cceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-CDFIVKLYKTFKD--KKYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                            ...++.+|+.+|+.+. ||||+++++++..  ...+|+||||+++++|..+.   +.+
T Consensus        72 ----------------------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l  126 (328)
T d3bqca1          72 ----------------------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTL  126 (328)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSC
T ss_pred             ----------------------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---cCC
Confidence                                  1245788999999995 9999999999874  45699999999999997754   469


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCC-cEEEEecccceecCCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSG-YVKLVDFGFAKKLIGP  359 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~-~~kl~DFG~a~~~~~~  359 (362)
                      ++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|+.+.+.
T Consensus       127 ~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            9999999999999999999999999999999999998655 6999999999877543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.4e-30  Score=235.44  Aligned_cols=148  Identities=22%  Similarity=0.412  Sum_probs=124.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.||+|.+.+..                                         
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~-----------------------------------------   45 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDN-VNKVRVAIKKISPFE-----------------------------------------   45 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEET-TTCSEEEEEEECCTT-----------------------------------------
T ss_pred             CCeEEEEEEeeccCeEEEEEEEC-CCCcEEEEEEEehhc-----------------------------------------
Confidence            57999999999999999999854 568899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccc-----eEEEEEeccCCcchHHHHHhcCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKK-----YLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                       ......++++|+.+|+.++||||+++++++....     .+|++|+ +.+++|.+++.. +++
T Consensus        46 -----------------~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~-~~~g~L~~~l~~-~~l  106 (345)
T d1pmea_          46 -----------------HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH-LMGADLYKLLKT-QHL  106 (345)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE-CCCEEHHHHHHH-CCC
T ss_pred             -----------------ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEe-ecCCchhhhhhc-CCC
Confidence                             1223456889999999999999999999986543     3556555 559999999975 479


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus       107 ~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_         107 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence            999999999999999999999999999999999999999999999999998664

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-29  Score=231.03  Aligned_cols=154  Identities=21%  Similarity=0.338  Sum_probs=129.3

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      .+++|++++.||+|+||.||++.+. .+++.||+|++.+..                                       
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~---------------------------------------   47 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMEN---------------------------------------   47 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC-------------------------------------------
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEehhh---------------------------------------
Confidence            4789999999999999999999965 568899999986531                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec--------cceEEEEEeccCCcchHHHHH
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD--------KKYLYMLMESCLGGELWTILR  298 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~  298 (362)
                                        .......++.+|+.+|+.++||||+++++++..        ++.+|++||++.++.+.....
T Consensus        48 ------------------~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~  109 (318)
T d3blha1          48 ------------------EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN  109 (318)
T ss_dssp             ------------------CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTC
T ss_pred             ------------------cchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhh
Confidence                              112234557899999999999999999998754        346899999997776666555


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        299 DKGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       299 ~~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ....+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus       110 ~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1         110 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred             cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence            566799999999999999999999999999999999999999999999999999987653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-29  Score=229.94  Aligned_cols=155  Identities=29%  Similarity=0.408  Sum_probs=135.0

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++.+.+    .+++.+|+|.+.+..                                   
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-----------------------------------   65 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-----------------------------------   65 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-----------------------------------
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-----------------------------------
Confidence            34789999999999999999998643    456689999886531                                   


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                             .......+.+|+.+++.+ +||||+++++++.+++.+|++|||+++|+|.+++.+..
T Consensus        66 -----------------------~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~  122 (311)
T d1t46a_          66 -----------------------HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR  122 (311)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             -----------------------CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhcc
Confidence                                   122345688999999998 79999999999999999999999999999999987532


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        302 ------------------NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       302 ------------------~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                                        .+++..+..++.|++.||.|||+++++||||||+||+++.++.++++|||+++.....
T Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~  198 (311)
T d1t46a_         123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND  198 (311)
T ss_dssp             TTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSC
T ss_pred             ccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCC
Confidence                              4889999999999999999999999999999999999999999999999999877543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-30  Score=226.57  Aligned_cols=148  Identities=28%  Similarity=0.464  Sum_probs=124.6

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHH
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  226 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~  226 (362)
                      ..++|++.+.||+|+||.||++...   +..+|+|.+.+..                                       
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~i~~~~---------------------------------------   42 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDA---------------------------------------   42 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET---TEEEEEEECCCCC---------------------------------------
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC---CeEEEEEEECcHH---------------------------------------
Confidence            4678999999999999999999864   5679999885431                                       


Q ss_pred             hhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeee-ccceEEEEEeccCCcchHHHHHhcC--CC
Q psy14740        227 IRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFK-DKKYLYMLMESCLGGELWTILRDKG--NF  303 (362)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~--~l  303 (362)
                                            ..+.+.+|+.++++++||||+++++++. ..+.+|+||||+++|+|.+++.+.+  .+
T Consensus        43 ----------------------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l  100 (262)
T d1byga_          43 ----------------------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL  100 (262)
T ss_dssp             ------------------------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHC
T ss_pred             ----------------------HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCC
Confidence                                  2245789999999999999999999874 4566899999999999999997543  48


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++...+
T Consensus       101 ~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_         101 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC
Confidence            9999999999999999999999999999999999999999999999999987543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.4e-30  Score=229.29  Aligned_cols=152  Identities=30%  Similarity=0.423  Sum_probs=119.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCC----CCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccc
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGD----PSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISS  223 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~  223 (362)
                      -++|++.+.||+|+||.||++.+.+.    +++.||+|.+....                                    
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~------------------------------------   55 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------------------------------   55 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----------------------------------------
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc------------------------------------
Confidence            47899999999999999999986542    34578999875431                                    


Q ss_pred             hHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhc-
Q psy14740        224 LDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDK-  300 (362)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-  300 (362)
                                            .......+.+|..++..+ +||||+.+++++.. +..+++||||+++|+|.+++... 
T Consensus        56 ----------------------~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~  113 (299)
T d1ywna1          56 ----------------------THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  113 (299)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTG
T ss_pred             ----------------------CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhcc
Confidence                                  122334567788877776 68999999998654 45789999999999999999753 


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 ---------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 ---------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                                     ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+...
T Consensus       114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~  185 (299)
T d1ywna1         114 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY  185 (299)
T ss_dssp             GGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CC
T ss_pred             ccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhcc
Confidence                           237899999999999999999999999999999999999999999999999998654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-29  Score=226.35  Aligned_cols=154  Identities=25%  Similarity=0.394  Sum_probs=127.1

Q ss_pred             cccCcEEEEEecccceecEEEEEecCCC------CCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhh
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAGDP------SRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQL  220 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~------~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~  220 (362)
                      ..++|.+.+.||+|+||.||++...+..      +..||+|.+.+.                                  
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~----------------------------------   56 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----------------------------------   56 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT----------------------------------
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc----------------------------------
Confidence            3478999999999999999999865422      236899987543                                  


Q ss_pred             ccchHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcchHHHHHh
Q psy14740        221 ISSLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                              ........+.+|...+..+ +||||+++++++.+++.+|+||||+++|+|.+++..
T Consensus        57 ------------------------~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~  112 (299)
T d1fgka_          57 ------------------------ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA  112 (299)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHT
T ss_pred             ------------------------cChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHh
Confidence                                    1123345678888888887 899999999999999999999999999999999974


Q ss_pred             c----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        300 K----------------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       300 ~----------------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .                ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++...+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~  187 (299)
T d1fgka_         113 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH  187 (299)
T ss_dssp             TSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGG
T ss_pred             hcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccc
Confidence            3                2489999999999999999999999999999999999999999999999999987644

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-29  Score=228.70  Aligned_cols=153  Identities=23%  Similarity=0.390  Sum_probs=132.8

Q ss_pred             cccCcEEEEEecccceecEEEEEecC----CCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhcc
Q psy14740        147 RLSDLRVITTLGVGGFGRVELVQIAG----DPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLIS  222 (362)
Q Consensus       147 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~  222 (362)
                      ..++|++.+.||+|+||.||++.+.+    .++..||+|.+.+.                                    
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~------------------------------------   61 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------------------------------   61 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT------------------------------------
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc------------------------------------
Confidence            45889999999999999999998643    23467999987543                                    


Q ss_pred             chHHhhhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhc--
Q psy14740        223 SLDEIRTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDK--  300 (362)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--  300 (362)
                                            ........+.+|+.+++.++||||+++++++..++..++||||+++|+|.+++...  
T Consensus        62 ----------------------~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~  119 (308)
T d1p4oa_          62 ----------------------ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP  119 (308)
T ss_dssp             ----------------------SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHH
T ss_pred             ----------------------cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhccc
Confidence                                  11223456889999999999999999999999999999999999999999988642  


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecC
Q psy14740        301 --------GNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLI  357 (362)
Q Consensus       301 --------~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~  357 (362)
                              ..++...+..++.|++.||.|||+++|+||||||+|||++.++++||+|||+|+.+.
T Consensus       120 ~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~  184 (308)
T d1p4oa_         120 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  184 (308)
T ss_dssp             HHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGG
T ss_pred             ccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceecc
Confidence                    236889999999999999999999999999999999999999999999999998664

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=226.15  Aligned_cols=152  Identities=22%  Similarity=0.357  Sum_probs=125.6

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      .++|++++.||+|+||.||++.+....++.||+|.+....                                        
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~----------------------------------------   45 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT----------------------------------------   45 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEB----------------------------------------
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhh----------------------------------------
Confidence            4789999999999999999999766657789999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhc---CCcceeeeeeeee-----ccceEEEEEeccCCcchHHHHHh
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEA---NCDFIVKLYKTFK-----DKKYLYMLMESCLGGELWTILRD  299 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~  299 (362)
                                       ........+.+|+.+|+.+   +||||+++++++.     ....+|++||+++++++......
T Consensus        46 -----------------~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  108 (305)
T d1blxa_          46 -----------------GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV  108 (305)
T ss_dssp             -----------------CTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHS
T ss_pred             -----------------ccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhc
Confidence                             1111223456788877765   7999999999874     34579999999988776554443


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceec
Q psy14740        300 -KGNFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKL  356 (362)
Q Consensus       300 -~~~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~  356 (362)
                       ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       109 ~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~  166 (305)
T d1blxa_         109 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  166 (305)
T ss_dssp             CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence             346999999999999999999999999999999999999999999999999998755

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-29  Score=231.03  Aligned_cols=151  Identities=21%  Similarity=0.374  Sum_probs=124.7

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++.+. .+++.||+|++.+..                                         
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~-----------------------------------------   55 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPF-----------------------------------------   55 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEET-TTTEEEEEEECSCTT-----------------------------------------
T ss_pred             CCeEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEECchh-----------------------------------------
Confidence            57999999999999999999855 468899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeecc-----ceEEEEEeccCCcchHHHHHhcCCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDK-----KYLYMLMESCLGGELWTILRDKGNF  303 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~l  303 (362)
                                      .+.....++.+|+.+|+.++||||+++++++...     ...+++|+++.+++|.+++.. +++
T Consensus        56 ----------------~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l  118 (348)
T d2gfsa1          56 ----------------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKL  118 (348)
T ss_dssp             ----------------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCC
T ss_pred             ----------------cChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccc
Confidence                            1223345678999999999999999999998533     234555666779999999865 579


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        304 DDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       304 ~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      ++..++.++.|++.||.|||++||+||||||+|||++.++.+|++|||+|.....
T Consensus       119 ~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1         119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCc
Confidence            9999999999999999999999999999999999999999999999999976543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=223.12  Aligned_cols=149  Identities=19%  Similarity=0.284  Sum_probs=125.3

Q ss_pred             EEEEecccceecEEEEEecCCCC--CceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        153 VITTLGVGGFGRVELVQIAGDPS--RSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       153 ~~~~lg~G~~g~v~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      ..+.||+|+||+||++.+....+  ..+|+|.+.+.                                            
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--------------------------------------------   66 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--------------------------------------------   66 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--------------------------------------------
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--------------------------------------------
Confidence            35789999999999998755433  35788887532                                            


Q ss_pred             ccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec-cceEEEEEeccCCcchHHHHHhcC-CCCHHHH
Q psy14740        231 YVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD-KKYLYMLMESCLGGELWTILRDKG-NFDDATT  308 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~  308 (362)
                                    .......++.+|+++|++++||||+++++++.. ++..++||||+++++|.+++.... .++...+
T Consensus        67 --------------~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~  132 (311)
T d1r0pa_          67 --------------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL  132 (311)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHH
T ss_pred             --------------cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHH
Confidence                          123345678999999999999999999998754 568999999999999999887543 4778889


Q ss_pred             HHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCC
Q psy14740        309 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGP  359 (362)
Q Consensus       309 ~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~  359 (362)
                      ..++.|++.||.|+|+.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus       133 ~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         133 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred             HHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence            999999999999999999999999999999999999999999999876543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-28  Score=224.54  Aligned_cols=150  Identities=24%  Similarity=0.357  Sum_probs=122.4

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +++|++++.||+|+||+||++.+. .+++.||+|++.+..                                        
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~-~t~~~vAvK~i~~~~----------------------------------------   54 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPF----------------------------------------   54 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEET-TTTEEEEEEEEESTT----------------------------------------
T ss_pred             cCCeEEEEEeecCcCeEEEEEEEC-CCCCEEEEEEEChhh----------------------------------------
Confidence            468999999999999999999865 468899999986531                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeec------cceEEEEEeccCCcchHHHHHhcC
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKD------KKYLYMLMESCLGGELWTILRDKG  301 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~  301 (362)
                                       .......++.+|+.+++.++||||++++++|..      ..++|+||||+.+ ++.+.+.  .
T Consensus        55 -----------------~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~--~  114 (355)
T d2b1pa1          55 -----------------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ--M  114 (355)
T ss_dssp             -----------------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT--S
T ss_pred             -----------------cCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccch-HHHHhhh--c
Confidence                             122334568899999999999999999999853      4689999999955 5555443  4


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        302 NFDDATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       302 ~l~~~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      .+++..++.++.|++.||.|||++||+||||||+|||++.++.++++|||+++....
T Consensus       115 ~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1         115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc
Confidence            699999999999999999999999999999999999999999999999999876543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-28  Score=218.74  Aligned_cols=144  Identities=18%  Similarity=0.220  Sum_probs=121.4

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      .+|.+.+.||+|+||.||++...   ++.||+|.+....                                         
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~---g~~vAvK~~~~~~-----------------------------------------   38 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSRE-----------------------------------------   38 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET---TEEEEEEEECGGG-----------------------------------------
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC---CEEEEEEEECccc-----------------------------------------
Confidence            46788999999999999999853   6789999875321                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHH--HHHHHhhcCCcceeeeeeeeeccc----eEEEEEeccCCcchHHHHHhcCC
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMS--EKEIMGEANCDFIVKLYKTFKDKK----YLYMLMESCLGGELWTILRDKGN  302 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~  302 (362)
                                           .....+  |+..+..++||||+++++++.+.+    .+|+||||+++|+|.+++++ .+
T Consensus        39 ---------------------~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~   96 (303)
T d1vjya_          39 ---------------------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YT   96 (303)
T ss_dssp             ---------------------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CC
T ss_pred             ---------------------hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc-CC
Confidence                                 122333  444556789999999999986543    68999999999999999986 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH--------CCcEeecCCCCcEEecCCCcEEEEecccceecCC
Q psy14740        303 FDDATTRFYTACVVEAFDYLHS--------RNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       303 l~~~~~~~~~~ql~~al~~lH~--------~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~  358 (362)
                      +++.....++.|++.||.|+|+        +||+||||||+|||++.++.+||+|||+++.+..
T Consensus        97 l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~  160 (303)
T d1vjya_          97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccC
Confidence            8999999999999999999996        5999999999999999999999999999987643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=1.1e-27  Score=215.01  Aligned_cols=147  Identities=20%  Similarity=0.269  Sum_probs=127.8

Q ss_pred             ccCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        148 LSDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       148 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      -++|++.+.||+|+||.||++.+. .+++.+|+|++....                                        
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~----------------------------------------   42 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRS----------------------------------------   42 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCT----------------------------------------
T ss_pred             CCceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEcccc----------------------------------------
Confidence            357999999999999999999965 458899999874421                                        


Q ss_pred             hhhccchhhhhccccccccchhhhhhHHHHHHHhhcCC-cceeeeeeeeeccceEEEEEeccCCcchHHHHHhcC-CCCH
Q psy14740        228 RTKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANC-DFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKG-NFDD  305 (362)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~  305 (362)
                                           ....+.+|+++++.+.| ||++.+++++......|+||||+ +++|.+++...+ .++.
T Consensus        43 ---------------------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~  100 (293)
T d1csna_          43 ---------------------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSV  100 (293)
T ss_dssp             ---------------------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             ---------------------CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhh
Confidence                                 12346788999999865 89999999999999999999999 889999887654 6999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC-----CCcEEEEecccceecC
Q psy14740        306 ATTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST-----SGYVKLVDFGFAKKLI  357 (362)
Q Consensus       306 ~~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~-----~~~~kl~DFG~a~~~~  357 (362)
                      ..+..++.|++.||.|||++||+||||||+|||++.     ++.+||+|||+|+.+.
T Consensus       101 ~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_         101 KTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            999999999999999999999999999999999964     5789999999998764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2.3e-27  Score=213.51  Aligned_cols=147  Identities=25%  Similarity=0.372  Sum_probs=122.0

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++.+.||+|+||.||++.+. .+++.||+|++....                                         
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~-----------------------------------------   44 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT-----------------------------------------   44 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEESCT-----------------------------------------
T ss_pred             CEEEEeEEEeeCCCcEEEEEEEC-CCCCEEEEEEEchhc-----------------------------------------
Confidence            46999999999999999999865 457899999875421                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcCCcc-eeeeeeeeeccceEEEEEeccCCcchHHHHH-hcCCCCHH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDF-IVKLYKTFKDKKYLYMLMESCLGGELWTILR-DKGNFDDA  306 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~  306 (362)
                                          ....+..|+++++.++|+| |+.++.++..++..++||||+ ++++.+.+. ..+.+++.
T Consensus        45 --------------------~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~~~~~~~  103 (299)
T d1ckia_          45 --------------------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLK  103 (299)
T ss_dssp             --------------------TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHH
T ss_pred             --------------------cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhhccCCCcHH
Confidence                                1234778999999997665 555666778888999999999 666666554 44579999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCcEeecCCCCcEEecC---CCcEEEEecccceecCC
Q psy14740        307 TTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLST---SGYVKLVDFGFAKKLIG  358 (362)
Q Consensus       307 ~~~~~~~ql~~al~~lH~~~iiHrDikp~NIl~~~---~~~~kl~DFG~a~~~~~  358 (362)
                      .+..++.|++.||+|||++||+||||||+|||++.   +..++|+|||+|+.+..
T Consensus       104 ~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_         104 TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            99999999999999999999999999999999864   45799999999998754

>d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=1.1e-24  Score=171.62  Aligned_cols=125  Identities=26%  Similarity=0.406  Sum_probs=116.5

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|++| +++++..|++.++.+.|++|++|+++||+++.+|+|.+|.|+++..+.+|++...+..++||++|||.
T Consensus         3 ~L~~i~~f~~L-~~~~~~~l~~~~~~~~~~~g~~I~~~Gd~~~~~yii~~G~v~~~~~~~~~~~~~~~~~~~~g~~fG~~   81 (132)
T d1ne6a2           3 FLSKVSILESL-DKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEI   81 (132)
T ss_dssp             HHHTSGGGGGS-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECCEEEEEESSSSCCEEEEEEECTTCEECHH
T ss_pred             hHhCCHhhhCC-CHHHHHHHHHhCEEEEECCCCEEEEcCCcchHHHHHHhhhheeeccCCccccchhhhhccccceeeEe
Confidence            47899999999 99999999999999999999999999999999999999999999998886665668999999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDET  133 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~  133 (362)
                      +++.+.||++|++|.  ++|+++.|++++|.+++..+|++..+.++..
T Consensus        82 ~~~~~~~~~~t~~a~--~~~~~~~i~~~~~~~ll~~~p~~~~~~i~~~  127 (132)
T d1ne6a2          82 ALLMNRPRAATVVAR--GPLKCVKLDRPRFERVLGPCSDILKRNIQQY  127 (132)
T ss_dssp             HHHHTSSCSSEEEES--SCEEEEEEEHHHHHHHTGGGHHHHHHGGGGC
T ss_pred             eecCCCceeEEEEEc--ccEEEEEEEHHHHHHHHHHCHHHHHHHHHHH
Confidence            999999999999999  5599999999999999999999987766543

>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=9.1e-24  Score=167.21  Aligned_cols=120  Identities=24%  Similarity=0.336  Sum_probs=111.4

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|+++ +++++..|+..++.+.|++|++|+++||+++.+|+|.+|.|+++....  +.+..+..+++|++|||+
T Consensus        17 ~l~~~~~F~~l-~~~~~~~l~~~~~~~~~~~g~~I~~~G~~~~~~y~I~~G~v~v~~~~~--~~~~~~~~l~~g~~fg~~   93 (136)
T d1cx4a1          17 ACKDILLFKNL-DPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCD--GVGRCVGNYDNRGSFGEL   93 (136)
T ss_dssp             HHTTCGGGTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEEET--TEEEEEEEEESSCEECHH
T ss_pred             HHhCCHhhhcC-CHHHHHHHhcceEEEEECCCCEEEECCCcchhhhhhhhheeEEeeccc--cceeeeeccCCccccchH
Confidence            57899999999 999999999999999999999999999999999999999999976653  455778899999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  130 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~  130 (362)
                      +++.+.|++++++|.  ++|++|.|++++|.+++..++...++++
T Consensus        94 ~l~~~~~~~~s~~a~--~~~~~~~i~~~~f~~ll~~~~~~~r~~y  136 (136)
T d1cx4a1          94 ALMYNTPRAATITAT--SPGALWGLDRVTFRRIIVKNNAKKRKMY  136 (136)
T ss_dssp             HHHHCCCCCSEEEES--SCEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCcceEEEEEC--CCEEEEEEeHHHHHHHHHhCHHHHHhcC
Confidence            999999999999999  5599999999999999999999887653

>d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=6.9e-24  Score=167.70  Aligned_cols=116  Identities=23%  Similarity=0.398  Sum_probs=107.2

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++++|+++ +++++.+|+..++.+.|++|++||++||+++.+|+|.+|.|++....      ..+..++||++|||+
T Consensus        21 ~l~~~~lF~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~yiI~~G~v~v~~~~------~~~~~l~~G~~fGe~   93 (136)
T d1ne6a1          21 AIEKNVLFSHL-DDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNN------EWATSVGEGGSFGEL   93 (136)
T ss_dssp             HHHHCGGGTSC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETT------EEEEEECTTCEECCH
T ss_pred             HHhCCHhhhhC-CHHHHHHHhcceEEEEECCCCEEEeCCCCcceeeeecCCceeeeccc------cccceeccccccccH
Confidence            47889999999 99999999999999999999999999999999999999999998532      457889999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhh
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  130 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~  130 (362)
                      +++.+.||++||+|.  ++|.++.|++++|..++..+|..+++++
T Consensus        94 ~ll~~~~~~~tv~a~--~~~~l~~i~~~~f~~ll~~~~~~~r~~y  136 (136)
T d1ne6a1          94 ALIYGTPRAATVKAK--TNVKLWGIDRDSYRRILMGSTLRKRKMY  136 (136)
T ss_dssp             HHHHCCCCCSEEEES--SCEEEEEEEHHHHHHHTHHHHHHHHHHH
T ss_pred             HHcCCCcceEEEEEc--cCEEEEEEEHHHHHHHHhhCHHHHHhhC
Confidence            999999999999999  5699999999999999999998876653

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=9e-24  Score=177.19  Aligned_cols=154  Identities=16%  Similarity=0.071  Sum_probs=109.0

Q ss_pred             EEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhhc
Q psy14740        152 RVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKY  231 (362)
Q Consensus       152 ~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~~  231 (362)
                      .+.+.||+|+||.||++.+.  +++.+|+|+++.+...... .+.                                   
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~--~g~~vAvKi~r~~~~~~~~-~~~-----------------------------------   44 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE--KFGECVVKFHKVGHTSFKK-VKE-----------------------------------   44 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET--TTEEEEEEEECC------C-CCC-----------------------------------
T ss_pred             hhCCEeeeCcceEEEEEECC--CCCEEEEEEEecccchhhh-hhh-----------------------------------
Confidence            57789999999999999854  4778999987653210000 000                                   


Q ss_pred             cchhhhhccccccccchhhhhhHHHHHHHhhcCCcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHH
Q psy14740        232 VDETSERRRAPQIVETRQQQHIMSEKEIMGEANCDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFY  311 (362)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~  311 (362)
                           .+.................|...+..+.|++++..+++..    .+++||++++..+.+       ++...+..+
T Consensus        45 -----~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i  108 (191)
T d1zara2          45 -----KRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG----NAVLMELIDAKELYR-------VRVENPDEV  108 (191)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEET----TEEEEECCCCEEGGG-------CCCSCHHHH
T ss_pred             -----hhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEecC----CEEEEEeeccccccc-------hhhHHHHHH
Confidence                 0000000011112234567888999999999998886642    379999998766533       455667789


Q ss_pred             HHHHHHHHHHHHHCCcEeecCCCCcEEecCCCcEEEEecccceecCCCC
Q psy14740        312 TACVVEAFDYLHSRNIIYRDLKPENLLLSTSGYVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       312 ~~ql~~al~~lH~~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~~~~~~  360 (362)
                      +.|++.++.|||++||+||||||+|||++.+ .++|+|||+|+....++
T Consensus       109 ~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~~~~  156 (191)
T d1zara2         109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEG  156 (191)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEETTSTT
T ss_pred             HHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccCCCCC
Confidence            9999999999999999999999999999865 58999999998876543

>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=2.2e-23  Score=167.25  Aligned_cols=127  Identities=29%  Similarity=0.494  Sum_probs=114.2

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCC-----CCcceEEEEecCCC
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPN-----STEEKYIRTLYKGD   80 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~-----~~~~~~~~~l~~G~   80 (362)
                      -|+++|+|++| +++++.+|+.+++.+.|++|++|+++||+++.+|+|++|.|+++....+     .+....+..++||+
T Consensus         3 ~l~~~p~f~~l-~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~~~~~~i~~~~~g~   81 (147)
T d1cx4a2           3 FIESLPFLKSL-EVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCLRGQ   81 (147)
T ss_dssp             HHHTCGGGTTS-CHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEEEEEEEEEEC--------CCEEEEEEECTTC
T ss_pred             hHhcCHhhcCC-CHHHHHHHHHhCEEEEECCCCEEEeCCCCCceeEEEecceEEEEEecCCCccccccceeeeeeccCCc
Confidence            47899999999 9999999999999999999999999999999999999999999876542     13446789999999


Q ss_pred             eeecccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         81 FFGEKALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        81 ~fGE~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      +|||.+++.+.|+++|++|.  ++|+++.|++++|.+++..+|++..+.+.....
T Consensus        82 ~fGe~~~~~~~~~~~t~~a~--~~~~~~~i~~~~f~~ll~~~~~i~~~~~~~~~~  134 (147)
T d1cx4a2          82 YFGELALVTNKPRAASAHAI--GTVKCLAMDVQAFERLLGPCMEIMKRNIATYEE  134 (147)
T ss_dssp             EESCHHHHHTCCCSSEEEEE--EEEEEEEEEHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred             EeeehhhcCCCCceEEEEEC--CCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
Confidence            99999999999999999999  569999999999999999999998777766554

>d1zyba2 b.82.3.2 (A:1-147) Probable transcription regulator BT4300, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Probable transcription regulator BT4300, N-terminal domain
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.89  E-value=2e-22  Score=161.50  Aligned_cols=131  Identities=18%  Similarity=0.184  Sum_probs=118.5

Q ss_pred             ccccccccccccCCHHHHHHHHhhcc--eeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSS--QTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~--~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      +.|+++|+|+++ +++++..|+..+.  .++|++|++|+++||+++.+|+|++|.|++...+.+ |++..+..+++|++|
T Consensus         6 d~L~~~~lF~~l-~~~~~~~ll~~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~v~~~~~~-g~~~~~~~~~~g~~f   83 (147)
T d1zyba2           6 DTLLQLPLFQGL-CHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKE-NIYTVIEQIEAPYLI   83 (147)
T ss_dssp             TTGGGSGGGTTC-CHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGG-GSCEEEEEEESSEEE
T ss_pred             HHHhCCcccccC-CHHHHHHHHhhCceEEEEECCCCEEEeccCCccEEEEEecceEEEEEEcCC-CCEEEEEEcCCCCEe
Confidence            468999999999 9999999998765  678999999999999999999999999999999888 455889999999999


Q ss_pred             ecccccCCCcc-eeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740         83 GEKALQGDDLR-TANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus        83 GE~~l~~~~~r-~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      ||++++.+.++ +++++|.  ++|+++.|+++.|.+++.++|.+..++++.++.+...
T Consensus        84 Ge~~~~~~~~~~~~~v~a~--~~~~vl~i~~~~~~~~~~~~p~~~~~~~~~ls~r~~~  139 (147)
T d1zyba2          84 EPQSLFGMNTNYASSYVAH--TEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQN  139 (147)
T ss_dssp             CGGGGSSSCCBCSSEEEES--SCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhcccccccceeeec--ceeeeeehhHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence            99999987765 7999999  5599999999999999999999999998877765443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.8e-22  Score=185.99  Aligned_cols=151  Identities=22%  Similarity=0.311  Sum_probs=115.6

Q ss_pred             cCcEEEEEecccceecEEEEEecCCCCCceeeeeeccccccccccccccceeeeCCCCceEEEeehhhHHhhccchHHhh
Q psy14740        149 SDLRVITTLGVGGFGRVELVQIAGDPSRSFALKQMKKSQVMNLDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIR  228 (362)
Q Consensus       149 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~  228 (362)
                      ++|++++.||+|+||.||++++. .+++.||+|++++..                                         
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~-~~g~~vAvKvi~~~~-----------------------------------------   50 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDK-----------------------------------------   50 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCH-----------------------------------------
T ss_pred             CcEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeccc-----------------------------------------
Confidence            46999999999999999999855 468899999986531                                         


Q ss_pred             hhccchhhhhccccccccchhhhhhHHHHHHHhhcC-----------Ccceeeeeeeeec--cceEEEEEeccCCcc-hH
Q psy14740        229 TKYVDETSERRRAPQIVETRQQQHIMSEKEIMGEAN-----------CDFIVKLYKTFKD--KKYLYMLMESCLGGE-LW  294 (362)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~i~~~~~~~~~--~~~~~lv~e~~~~~~-L~  294 (362)
                                         ...+...+|+.+++.++           ||||+++++++..  ....+++|.++.... ..
T Consensus        51 -------------------~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (362)
T d1q8ya_          51 -------------------VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL  111 (362)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHH
T ss_pred             -------------------cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccc
Confidence                               11234566777776653           6889999988754  345666666654443 33


Q ss_pred             HHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEeecCCCCcEEecCCC------cEEEEecccceecCCCC
Q psy14740        295 TILR--DKGNFDDATTRFYTACVVEAFDYLHS-RNIIYRDLKPENLLLSTSG------YVKLVDFGFAKKLIGPR  360 (362)
Q Consensus       295 ~~l~--~~~~l~~~~~~~~~~ql~~al~~lH~-~~iiHrDikp~NIl~~~~~------~~kl~DFG~a~~~~~~~  360 (362)
                      ....  ....+++..++.++.|++.||.|||+ +||+||||||+|||++.++      .++++|||.|+......
T Consensus       112 ~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~  186 (362)
T d1q8ya_         112 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY  186 (362)
T ss_dssp             HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC
T ss_pred             cccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccccc
Confidence            3222  23468999999999999999999998 8999999999999998655      39999999998765443

>d1wgpa_ b.82.3.2 (A:) Probable cyclic nucleotide-gated ion channel 6 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Probable cyclic nucleotide-gated ion channel 6
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=7.4e-23  Score=161.88  Aligned_cols=118  Identities=15%  Similarity=0.262  Sum_probs=105.3

Q ss_pred             CcccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740          3 KNPELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus         3 ~~~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      ..+.|+++|+|+++ +++.+.+|+..++.+.|++|++|+++||+++.||+|.+|.|++.....++.....+..++||++|
T Consensus         4 ~~s~l~~vp~F~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~ly~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f   82 (137)
T d1wgpa_           4 GSSGVRRVPLFENM-DERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFC   82 (137)
T ss_dssp             CSCSCSSCSGGGSC-CHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBS
T ss_pred             HHHHHHCCHhHhCC-CHHHHHHHHHhcEEEEECCCCEEEecccccceeehhccCceEEEEecCCCceeeeeeeccCCcEE
Confidence            35679999999999 99999999999999999999999999999999999999999998877765666778899999999


Q ss_pred             ecccccC---------CCcceeeEEecCCCCeEEEEEehhhHHHHhhchH
Q psy14740         83 GEKALQG---------DDLRTANIVAADPEGVSCLVIDQETFNQLISSLD  123 (362)
Q Consensus        83 GE~~l~~---------~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p  123 (362)
                      ||++++.         ..+|++||+|+  ++|++|.|++++|+.++.+.+
T Consensus        83 GE~~ll~~~~~~~~~~~~~r~~tv~a~--t~~~l~~L~~~dl~~il~~~~  130 (137)
T d1wgpa_          83 GDELLTWALDPKSGSNLPSSTRTVKAL--TEVEAFALIADELKFVASQFR  130 (137)
T ss_dssp             STHHHHHHHCSSCCSSSCBCSSEEEES--SCBEEEEEEHHHHHHHHHHHC
T ss_pred             cchhHhccCCCcccccccccCcEEEEe--eeEEEEEEEHHHHHHHHHHhc
Confidence            9998862         24688999999  559999999999999886543

>d1vp6a_ b.82.3.2 (A:) Putative ion channel CnbD {Mesorhizobium loti [TaxId: 381]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Putative ion channel CnbD
species: Mesorhizobium loti [TaxId: 381]

Probab=99.87  E-value=1.4e-22  Score=159.53  Aligned_cols=121  Identities=31%  Similarity=0.411  Sum_probs=110.5

Q ss_pred             ccccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          5 PELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         5 ~~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .-|+++|+|+++ +++++..|+..++.+.|++|++|+++||+++.+|+|.+|.|+++..+   +     ..++||++|||
T Consensus        11 ~~l~~~p~F~~l-~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~I~~G~v~v~~~~---~-----~~l~~G~~~G~   81 (133)
T d1vp6a_          11 QLVAAVPLFQKL-GPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN---P-----VELGPGAFFGE   81 (133)
T ss_dssp             HHHTTCGGGGGC-CHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS---C-----EEECTTCEECH
T ss_pred             HHHHCCCccccC-CHHHHHHHHHhCEEEEECCCCEEEeCCCCCccceeeeccccEEEEee---e-----eeeccCccccc
Confidence            357899999999 99999999999999999999999999999999999999999987432   1     25899999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSER  136 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~  136 (362)
                      .+++.+.|+.++++|.  ++|+++.|++++|.+++.++|.+...+++.+..+
T Consensus        82 ~~~l~~~~~~~~~~a~--~~~~i~~i~~~~~~~l~~~~p~~~~~~~~~~~~R  131 (133)
T d1vp6a_          82 MALISGEPRSATVSAA--TTVSLLSLHSADFQMLCSSSPEIAEIFRKTALER  131 (133)
T ss_dssp             HHHHHCCCCSSCEEES--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             ccccCCCcccceEEEC--CCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence            9999999999999999  5599999999999999999999999888776654

>d2gaua2 b.82.3.2 (A:10-151) Transcriptional regulator PG0396, N-terminal domain {Porphyromonas gingivalis [TaxId: 837]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Transcriptional regulator PG0396, N-terminal domain
species: Porphyromonas gingivalis [TaxId: 837]

Probab=99.86  E-value=9.7e-22  Score=156.54  Aligned_cols=125  Identities=15%  Similarity=0.210  Sum_probs=111.9

Q ss_pred             ccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCC
Q psy14740         11 AYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD   90 (362)
Q Consensus        11 ~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~   90 (362)
                      .+|+.+ +++++..+...++.+.|++|++|+.+|++++.+|+|.+|.|+++..+.+ |++.++..++||++|||.+++.+
T Consensus         7 elf~~l-~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~ly~v~~G~v~~~~~~~~-g~~~~~~~~~~G~~~G~~~~~~~   84 (142)
T d2gaua2           7 DVWSLL-NEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVY-GRFHISRIVKPGQFFGMRPYFAE   84 (142)
T ss_dssp             HHHTTC-CHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC------CCCEEEEECTTCEESHHHHHHT
T ss_pred             HHHccC-CHHHHHHHHhcCEEEEECCCCEEEeCCCccceEEEEEecceeeEeeccc-cceeeeecccccchhhhhhhhcc
Confidence            479999 9999999999999999999999999999999999999999999998887 55588999999999999999999


Q ss_pred             CcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740         91 DLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus        91 ~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      .|+.++++|+  ++|+++.|++++|.+++.++|.+...++..+..+...
T Consensus        85 ~~~~~~~~a~--~~s~v~~i~~~~~~~l~~~~~~~~~~~~~~l~~rl~~  131 (142)
T d2gaua2          85 ETCSSTAIAV--ENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGY  131 (142)
T ss_dssp             SCCSSEEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CCceeEEEec--CCEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence            9999999999  5599999999999999999999999888877665443

>d1o7fa2 b.82.3.2 (A:13-167) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory domain of Epac2, domains 1 and 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.1e-21  Score=158.59  Aligned_cols=121  Identities=25%  Similarity=0.351  Sum_probs=110.2

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCC-CcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNS-TEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~-~~~~~~~~l~~G~~fGE   84 (362)
                      .|++.++|+.+ +++.+.+|+..++.+.|++|++|+++||+++.+|+|.+|.|.|......+ +....+..++||++|||
T Consensus        25 ~L~~~~~F~~l-~~~~l~~l~~~~~~~~~~~ge~I~~~gd~~~~~y~I~~G~v~v~~~~~~~~~~~~~v~~l~~g~~fGe  103 (155)
T d1o7fa2          25 RLKGVKAFEKF-HPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE  103 (155)
T ss_dssp             HHTTCTTTTTC-CHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred             HHhCCHhHhcC-CHHHHHHHHHhcEEEEECCCCEEEeCCCcceeeEEEeccchheeeecccccccccccccccccccchh
Confidence            47889999999 99999999999999999999999999999999999999999998765432 44677899999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhh
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYV  130 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~  130 (362)
                       +++.+.||++||+|.  ++|+++.|++++|.+++.++|++...++
T Consensus       104 -~~l~~~~~~~tv~a~--~~~~l~~i~~~~f~~il~~~~~~~~~ll  146 (155)
T d1o7fa2         104 -SILDNTPRHATIVTR--ESSELLRIEQEDFKALWEKYRQYMAGLL  146 (155)
T ss_dssp             -GGGGTCBCSSEEEES--SSEEEEEEEHHHHHHHHHHHGGGTTTTS
T ss_pred             -hhhcCCCceEEEEEC--CCEEEEEEeHHHHHHHHHHCHHHHHHHH
Confidence             899999999999999  5599999999999999999999876655

>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory domain of Epac2, domains 1 and 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=2.1e-21  Score=150.85  Aligned_cols=112  Identities=30%  Similarity=0.425  Sum_probs=100.1

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEe-cCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeec
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFY-KEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGE   84 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~-~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE   84 (362)
                      .|+++|+|+++ +++.+++|+.++....+ ++|++|+++||+++.+|+|.+|.|++....     ...+..++||++|||
T Consensus        11 ~L~~~~~F~~l-~~~~l~~l~~~~~~~~~~~~ge~I~~~gd~~~~lyii~~G~v~~~~~~-----~~~~~~~~~G~~fGe   84 (124)
T d1o7fa3          11 ELLHIKALSHL-STTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG-----KGVVCTLHEGDDFGK   84 (124)
T ss_dssp             HHTTCGGGTTS-CHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETT-----TEEEEEEETTCEECG
T ss_pred             HHhCCHhhhcC-CHHHHHHHHhhCeEEEEcCCCCEEEECCCcCceEEEEEcceEEEEEee-----eeecccccCCcchhh
Confidence            58999999999 99999999999987665 679999999999999999999999987532     245788999999999


Q ss_pred             ccccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHH
Q psy14740         85 KALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDE  124 (362)
Q Consensus        85 ~~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~  124 (362)
                      ++++.+.||++|++|.++ .|+++.|++++|.+++.+.|+
T Consensus        85 ~~ll~~~~r~~t~~a~~~-~~~l~~i~~~~f~~il~~~~~  123 (124)
T d1o7fa3          85 LALVNDAPRAASIVLRED-NCHFLRVDKEDFNRILRDVEA  123 (124)
T ss_dssp             GGGTCCSCCSSEEEESSS-SEEEEEEEHHHHHHHHHHTTC
T ss_pred             hHhhCCCceeeEEEEEeC-cEEEEEEcHHHHHHHHhhccC
Confidence            999999999999999932 389999999999999987763

>d2oz6a2 b.82.3.2 (A:9-142) Cyclic AMP receptor-like protein Vfr {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Cyclic AMP receptor-like protein Vfr
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=1e-20  Score=148.94  Aligned_cols=117  Identities=26%  Similarity=0.335  Sum_probs=106.1

Q ss_pred             HHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCC----Cccee
Q psy14740         20 GVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD----DLRTA   95 (362)
Q Consensus        20 ~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~----~~r~~   95 (362)
                      +++++|+..++.++|++|++|+++||+++.+|+|++|.|+++..+.+ |++.++..++||++|||++++.+    .|+++
T Consensus         3 ~~le~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~v~~~~~~-g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~   81 (134)
T d2oz6a2           3 KHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDD-GREMIIGYLNSGDFFGELGLFEKEGSEQERSA   81 (134)
T ss_dssp             HHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTT-SCEEEEEEEETTCEESCTTTCC-----CBCCS
T ss_pred             HHHHHHHHhCEEEEECCCCEEEeCCCcCCEEEEEEEcccceeeeecc-cccceeeeccCCCccchHHHhcCcccccccee
Confidence            68999999999999999999999999999999999999999999988 55588999999999999999864    47899


Q ss_pred             eEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740         96 NIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus        96 ~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      +++|.  ++|+++.||++.|.+++..+|++...+++.+..+...
T Consensus        82 ~~~a~--~~~~vl~i~~~~~~~~~~~~~~~~~~~~~~~~~rl~~  123 (134)
T d2oz6a2          82 WVRAK--VECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRK  123 (134)
T ss_dssp             EEEES--SCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEC--CCEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence            99999  5599999999999999999999999888877765443

>d1i5za2 b.82.3.2 (A:6-137) Catabolite gene activator protein, N-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Catabolite gene activator protein, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.2e-20  Score=148.20  Aligned_cols=119  Identities=24%  Similarity=0.353  Sum_probs=108.4

Q ss_pred             CHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCC-Ccceee
Q psy14740         18 NQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGD-DLRTAN   96 (362)
Q Consensus        18 ~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~-~~r~~~   96 (362)
                      ++++++.++..++.+.|++|++|+++||+.+.+|+|++|.|+++..+.+ |++.++..+.||++||+.+++.+ .|+.++
T Consensus         2 sd~~le~l~~~~~~~~~~~g~~i~~~g~~~~~iy~i~~G~v~~~~~~~~-g~e~~l~~~~~G~~~G~~~~~~~~~~~~~~   80 (132)
T d1i5za2           2 TDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEE-GKEMILSYLNQGDFIGELGLFEEGQERSAW   80 (132)
T ss_dssp             CCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEECCEEEEEECTT-CCEEEEEEECTTCEESCTTTTSSSCBCCSE
T ss_pred             CHHHHHHHHHhCEEEEECcCCEEEcCCCCCCEEEEEEEccceeeecccc-chhhhhhhhCcccccchHHHhcCCccceEE
Confidence            5788999999999999999999999999999999999999999999988 55588999999999999999975 788999


Q ss_pred             EEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740         97 IVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus        97 ~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      ++|.  ++|+++.|++++|.+++..+|.+..++++.+..+...
T Consensus        81 ~~a~--~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~l~~rl~~  121 (132)
T d1i5za2          81 VRAK--TACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQV  121 (132)
T ss_dssp             EEES--SCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred             EEEc--cceEEEEEcHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence            9999  5599999999999999999999999888877665443

>d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: HCN pacemaker channel
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=1e-20  Score=158.62  Aligned_cols=121  Identities=22%  Similarity=0.389  Sum_probs=109.3

Q ss_pred             cccccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecc
Q psy14740          6 ELKLRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEK   85 (362)
Q Consensus         6 ~L~~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~   85 (362)
                      .|+++|+|+++ ++..+..|+..++...|.+|++|+++||+++.+|+|.+|.|.|....   +.   +..+++|++|||.
T Consensus        69 ~l~~~~~F~~~-~~~~l~~l~~~~~~~~~~~g~~I~~~g~~~~~ly~i~~G~v~v~~~~---~~---~~~l~~G~~fGe~  141 (193)
T d1q3ea_          69 LVASMPLFANA-DPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG---NK---EMKLSDGSYFGEI  141 (193)
T ss_dssp             HHHHCHHHHTS-CHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEC-C---CC---EEEECTTCEECHH
T ss_pred             HHhcchHHHhh-hHHHHHHHHHHHHHHhhccCceecccCCCCcceeEeeeeeEEeecCC---cc---eeeeccceeeeee
Confidence            47789999999 99999999999999999999999999999999999999999997432   22   5679999999999


Q ss_pred             cccCCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhH
Q psy14740         86 ALQGDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSE  135 (362)
Q Consensus        86 ~l~~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~  135 (362)
                      +++.+.+|++|++|.  ++|+++.|++++|..++..+|.+...+......
T Consensus       142 ~~~~~~~~~~~~~a~--~~~~l~~l~~~~f~~ll~~~p~~~~~~~~~~~~  189 (193)
T d1q3ea_         142 CLLTRGRRTASVRAD--TYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID  189 (193)
T ss_dssp             HHHHCSBCSSEEEES--SCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHH
T ss_pred             eccCCCcccccceec--CceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH
Confidence            999999999999999  559999999999999999999998877765543

>d1o5la1 b.82.3.2 (A:1-129) CRP-like transcriptional regulator TM1171, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: CRP-like transcriptional regulator TM1171, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=4.7e-20  Score=144.05  Aligned_cols=116  Identities=18%  Similarity=0.262  Sum_probs=104.6

Q ss_pred             HHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcc-eeeEEe
Q psy14740         21 VILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR-TANIVA   99 (362)
Q Consensus        21 ~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r-~~~~~A   99 (362)
                      +++.|+.+++.+.|++|++|+++||+++++|+|++|.|+++..+.+ |.+..+..++||++|||++++.+.++ +++++|
T Consensus         2 dl~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~a   80 (129)
T d1o5la1           2 DLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSEN-GKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVA   80 (129)
T ss_dssp             CGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTT-SCEEEEEEECSSEESSGGGTTSSSCBCSSEEEE
T ss_pred             cHHHHHhCCEEEEECCCCEEEECCCcCcEEEEEeccccEEEEeecc-cccchhhhcccccccchHHHhccCCCccEEEEe
Confidence            3677889999999999999999999999999999999999999888 55588999999999999999988764 699999


Q ss_pred             cCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740        100 ADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus       100 ~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      .  ++|+++.|+++.|.+++..+|.+...+++.++.+...
T Consensus        81 ~--~~~~vl~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  118 (129)
T d1o5la1          81 G--ENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRV  118 (129)
T ss_dssp             S--SSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             e--cccEEEEEcHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            9  5699999999999999999999999998887765443

>d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Chlorophenol reduction protein CprK
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=99.81  E-value=1.6e-19  Score=142.86  Aligned_cols=120  Identities=9%  Similarity=0.090  Sum_probs=108.3

Q ss_pred             ccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCc
Q psy14740         13 FVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDL   92 (362)
Q Consensus        13 f~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~   92 (362)
                      +.-+ +.++++.++..++.+.|++|++|+++||+.+++|+|++|.|+++..+.+ |++.++..++||++|||++.   .+
T Consensus         9 ~~~~-p~e~l~~l~~~~~~~~y~kg~~i~~~g~~~~~~y~v~~G~v~~~~~~~~-g~~~~l~~~~~g~~~g~~~~---~~   83 (139)
T d3e5ua2           9 DNFF-PIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFED-GSEKLLYYAGGNSLIGKLYP---TG   83 (139)
T ss_dssp             BSCS-CCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESEEEEEEECTT-SCEEEEEEEETTCEECCCSC---CS
T ss_pred             CCCC-CHHHHHHHHHhCEEEEECCCCEEEeCCCCCCEEEEEEeccceEEEeecc-ccccceeeccccceeehhhh---hc
Confidence            4555 8899999999999999999999999999999999999999999999988 56689999999999999653   46


Q ss_pred             ceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHhhh
Q psy14740         93 RTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERRRL  139 (362)
Q Consensus        93 r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~~~  139 (362)
                      ++++++|.  ++|+++.|+++.|..++..+|++...+++.+..+...
T Consensus        84 ~~~~~~a~--~~~~v~~i~~~~f~~l~~~~p~l~~~il~~~~~r~~~  128 (139)
T d3e5ua2          84 NNIYATAM--EPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAY  128 (139)
T ss_dssp             CEEEEEES--SCEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred             cccccccc--ccceEEEeeHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            88999999  6699999999999999999999999999888776443

>d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: CO-sensing protein CooA, N-terminal domain
domain: CO-sensing protein CooA, N-terminal domain
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=99.79  E-value=1.1e-19  Score=142.56  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=106.8

Q ss_pred             ccccccccCCHHHHHHHHhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc
Q psy14740          9 LRAYFVHLVNQGVILTIVYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ   88 (362)
Q Consensus         9 ~~~lf~~l~~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~   88 (362)
                      +.++|..| ++++++.++..++.++|++|++|+++|++++++|+|++|.|+++..+ + +++..+..++||++|||.   
T Consensus         3 r~~~~~~L-~~~~~~~~~~~~~~~~~~kG~~i~~~g~~~~~ly~v~~G~v~~~~~~-~-g~e~~l~~~~~g~~f~~~---   76 (132)
T d1ft9a2           3 RFNIANVL-LSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVG-E-EREISLFYLTSGDMFCMH---   76 (132)
T ss_dssp             CCCTHHHH-TSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEE-T-TEEEEEEEEETTCEEESC---
T ss_pred             CcChhHhC-CHHHHHHHHHhCEEEEecCCcEEECCCCCCCEEEEEEeCeEeeeccc-c-ccceeecccccccccccc---
Confidence            57899999 99999999999999999999999999999999999999999999776 4 456889999999999984   


Q ss_pred             CCCcceeeEEecCCCCeEEEEEehhhHHHHhhchHHHHHhhhhhhhHHh
Q psy14740         89 GDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTKYVDETSERR  137 (362)
Q Consensus        89 ~~~~r~~~~~A~~~~~~~~~~i~~~~f~~l~~~~p~~~~~~~~~~~~~~  137 (362)
                          ++++++|+  ++|+++.|+++.|.+++.++|.+...+++.+..+.
T Consensus        77 ----~~~~v~A~--~~s~v~~i~~~~~~~ll~~~p~~~~~l~~~l~~rl  119 (132)
T d1ft9a2          77 ----SGCLVEAT--ERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRAL  119 (132)
T ss_dssp             ----SSCEEEES--SCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred             ----ccccceec--cceeeeeehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                47899999  66999999999999999999999998888877653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.55  E-value=2.5e-07  Score=79.20  Aligned_cols=99  Identities=16%  Similarity=0.132  Sum_probs=64.8

Q ss_pred             hhHHHHHHHhhcC-CcceeeeeeeeeccceEEEEEeccCCcchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------
Q psy14740        252 HIMSEKEIMGEAN-CDFIVKLYKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDATTRFYTACVVEAFDYLHS------  324 (362)
Q Consensus       252 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~al~~lH~------  324 (362)
                      .+.+|...+..+. +--+++++.+...++..|+||++++|.++.+.....  ..   ...+..++...+..||+      
T Consensus        55 ~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~--~~---~~~~~~~l~~~l~~lH~~~~~~~  129 (263)
T d1j7la_          55 DVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE--QS---PEKIIELYAECIRLFHSIDISDC  129 (263)
T ss_dssp             CHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC--SC---HHHHHHHHHHHHHHHHTSCCTTC
T ss_pred             hHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc--cc---HHHHHHHHHHHHHHHhccCcccc
Confidence            4667888777663 333677778777888999999999988875533210  01   11122222222333331      


Q ss_pred             -----------------------------------------------------CCcEeecCCCCcEEecCCCcEEEEecc
Q psy14740        325 -----------------------------------------------------RNIIYRDLKPENLLLSTSGYVKLVDFG  351 (362)
Q Consensus       325 -----------------------------------------------------~~iiHrDikp~NIl~~~~~~~kl~DFG  351 (362)
                                                                           ..++|+|+.|.|||++.++.+.|+||+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe  209 (263)
T d1j7la_         130 PYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLG  209 (263)
T ss_dssp             SCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCT
T ss_pred             ccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeech
Confidence                                                                 137999999999999877667799999


Q ss_pred             ccee
Q psy14740        352 FAKK  355 (362)
Q Consensus       352 ~a~~  355 (362)
                      .+..
T Consensus       210 ~a~~  213 (263)
T d1j7la_         210 RSGR  213 (263)
T ss_dssp             TCEE
T ss_pred             hccc
Confidence            8763

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.93  E-value=2e-05  Score=66.54  Aligned_cols=42  Identities=10%  Similarity=0.096  Sum_probs=31.3

Q ss_pred             hhHHHHHHHhhcC--CcceeeeeeeeeccceEEEEEeccCCcch
Q psy14740        252 HIMSEKEIMGEAN--CDFIVKLYKTFKDKKYLYMLMESCLGGEL  293 (362)
Q Consensus       252 ~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  293 (362)
                      .+..|...++.+.  .-.+++++.+..+++..++||++++|.++
T Consensus        50 ~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          50 ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3567777777663  22367778887888889999999988765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.87  E-value=3.7e-05  Score=69.53  Aligned_cols=28  Identities=29%  Similarity=0.389  Sum_probs=24.6

Q ss_pred             CcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        326 NIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       326 ~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .++|+|+.|.|||++.++ ++++||-.|.
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhcc
Confidence            589999999999998664 8999998875

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.003  Score=54.89  Aligned_cols=29  Identities=24%  Similarity=0.257  Sum_probs=23.6

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEeccccee
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAKK  355 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~~  355 (362)
                      .++||+|+.|.|||++. + ..++||+-|+.
T Consensus       192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            36899999999999964 3 45899998863

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.36  E-value=0.014  Score=50.12  Aligned_cols=30  Identities=30%  Similarity=0.417  Sum_probs=27.2

Q ss_pred             CCcEeecCCCCcEEecCCCcEEEEecccce
Q psy14740        325 RNIIYRDLKPENLLLSTSGYVKLVDFGFAK  354 (362)
Q Consensus       325 ~~iiHrDikp~NIl~~~~~~~kl~DFG~a~  354 (362)
                      .|+||+|+.++|++++.+...-++||+.|.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            479999999999999988777999999885

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.10  E-value=0.012  Score=52.29  Aligned_cols=37  Identities=24%  Similarity=0.187  Sum_probs=25.5

Q ss_pred             hHHHHHHHhhc-CCcceeeeeeeeeccceEEEEEeccCCcch
Q psy14740        253 IMSEKEIMGEA-NCDFIVKLYKTFKDKKYLYMLMESCLGGEL  293 (362)
Q Consensus       253 ~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  293 (362)
                      ..+|..+++.+ .+.-.+++++++.+    ++|++|++|.++
T Consensus        91 r~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l  128 (395)
T d1nw1a_          91 LVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL  128 (395)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccC
Confidence            35688888777 34445677777753    578999987554

>d2bgca2 b.82.3.3 (A:7-137) Listeriolysin regulatory protein PrfA, N-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: Listeriolysin regulatory protein PrfA, N-terminal domain
domain: Listeriolysin regulatory protein PrfA, N-terminal domain
species: Bacteria (Listeria monocytogenes) [TaxId: 1639]

Probab=93.84  E-value=0.56  Score=31.59  Aligned_cols=92  Identities=17%  Similarity=0.183  Sum_probs=68.6

Q ss_pred             hcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcc--eeeEEecCCCCe
Q psy14740         28 FSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLR--TANIVAADPEGV  105 (362)
Q Consensus        28 ~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r--~~~~~A~~~~~~  105 (362)
                      ..++..|++-+.||.|=||.+...++-+|..+++..+.+ |. ..--....|.+.=--..++....  -++...++ +.+
T Consensus        10 gikpk~f~kke~ifnqwdp~eycifl~dgiakltsisen-g~-imnlqyykgafiimsg~idt~~~lgyynlevis-e~a   86 (131)
T d2bgca2          10 GIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISEN-GT-IMNLQYYKGAFVIMSGFIDTETSVGYYNLEVIS-EQA   86 (131)
T ss_dssp             TCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTT-SC-EEEEEEEESSEEEESBCTTTCCBSCCCEEEECS-SEE
T ss_pred             CCChhhhchhheeecccCcceeEEeeecchHHhcccccC-Cc-EEeeeeccccEEEEecccccCCccceeeeeeeh-hcc
Confidence            346889999999999999999999999999999999887 44 33445667777654445544322  23444444 458


Q ss_pred             EEEEEehhhHHHHhhch
Q psy14740        106 SCLVIDQETFNQLISSL  122 (362)
Q Consensus       106 ~~~~i~~~~f~~l~~~~  122 (362)
                      +.++|.-.++..++..+
T Consensus        87 tayvikisdlk~lvs~d  103 (131)
T d2bgca2          87 TAYVIKINELKELLSKN  103 (131)
T ss_dssp             EEEEEEHHHHHHHHHHC
T ss_pred             eeeeEEHHHHHHHHHHh
Confidence            88999999999988764

>d1ne6a2 b.82.3.2 (A:245-376) Regulatory subunit of Protein kinase A {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.24  E-value=0.25  Score=35.70  Aligned_cols=66  Identities=18%  Similarity=0.411  Sum_probs=49.2

Q ss_pred             ecEEEEEecCCCCCceeeeeecccccccc-----ccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        163 GRVELVQIAGDPSRSFALKQMKKSQVMNL-----DDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       163 g~v~~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      |.|.......+..+.+.+..+.+++.++.     +.++.+++.|..+  +.++.++++.|.+++...+++..+
T Consensus        52 G~v~~~~~~~~~~~~~~~~~~~~g~~fG~~~~~~~~~~~~t~~a~~~--~~~~~i~~~~~~~ll~~~p~~~~~  122 (132)
T d1ne6a2          52 GSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGP--LKCVKLDRPRFERVLGPCSDILKR  122 (132)
T ss_dssp             CCEEEEEESSSSCCEEEEEEECTTCEECHHHHHHTSSCSSEEEESSC--EEEEEEEHHHHHHHTGGGHHHHHH
T ss_pred             hhheeeccCCccccchhhhhccccceeeEeeecCCCceeEEEEEccc--EEEEEEEHHHHHHHHHHCHHHHHH
Confidence            55554443434444556888889999983     4677888888755  999999999999999888877654

>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: TM1287-like
domain: Hypothetical protein SPy1581
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.47  E-value=0.68  Score=32.37  Aligned_cols=67  Identities=18%  Similarity=0.250  Sum_probs=45.6

Q ss_pred             ceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEEE
Q psy14740         30 SQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCLV  109 (362)
Q Consensus        30 ~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~~  109 (362)
                      ....+++|+.+=..--+.+.+++|++|++.+...    ++   ...+.+||++=-   =.+.++  .++|.++  +.++.
T Consensus        40 ~~~~~~~G~~~~~H~h~~~~~~~vl~G~~~~~~~----~~---~~~l~~Gd~~~i---p~~~~H--~~~a~~~--~~~l~  105 (112)
T d1yhfa1          40 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITID----QE---TYRVAEGQTIVM---PAGIPH--ALYAVEA--FQMLL  105 (112)
T ss_dssp             EEEEECTTCEEEEECCSSEEEEEEEESEEEEEET----TE---EEEEETTCEEEE---CTTSCE--EEEESSC--EEEEE
T ss_pred             EEEEECCCCCcceEECCCCEEEEEEeCEEEEEEc----cE---EEEecCCEEEEc---CCCCeE--EeEECCC--cEEEE
Confidence            3456789998887777788999999999998742    33   346799998631   133444  5566744  55544


Q ss_pred             E
Q psy14740        110 I  110 (362)
Q Consensus       110 i  110 (362)
                      +
T Consensus       106 ~  106 (112)
T d1yhfa1         106 V  106 (112)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: MJ0764-like
domain: Hypothetical protein MJ0764
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.36  E-value=0.44  Score=33.25  Aligned_cols=73  Identities=14%  Similarity=0.201  Sum_probs=48.4

Q ss_pred             cceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEE
Q psy14740         29 SSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCL  108 (362)
Q Consensus        29 ~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~  108 (362)
                      +....+++|+.+-..=-+.+.+++|++|+..+...+   ++.   ..+++||++=-   =.+.+  ..+.+.+++++.++
T Consensus        28 v~~~~l~pG~~~p~H~H~~~e~~~Vl~G~~~~~v~~---~e~---~~v~~Gd~i~i---p~~~~--H~~~n~~~e~l~~l   96 (108)
T d2b8ma1          28 INHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLED---QEP---HNYKEGNIVYV---PFNVK--MLIQNINSDILEFF   96 (108)
T ss_dssp             EEEEEEETTCBCCCEECSSCEEEEEEESEEEEEETT---SCC---EEEETTCEEEE---CTTCE--EEEECCSSSEEEEE
T ss_pred             EEEEEECCCCcChhhcccccEEEEEEeeeEEEEEec---ccE---EEeecceEeec---cCCce--EEEEcCCCCcEEEE
Confidence            346678888887665556778999999999997532   332   24689987631   23444  45566655778887


Q ss_pred             EEeh
Q psy14740        109 VIDQ  112 (362)
Q Consensus       109 ~i~~  112 (362)
                      .+..
T Consensus        97 ~v~~  100 (108)
T d2b8ma1          97 VVKA  100 (108)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            7754

>d1cx4a2 b.82.3.2 (A:266-412) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.75  E-value=0.63  Score=34.07  Aligned_cols=54  Identities=22%  Similarity=0.394  Sum_probs=43.0

Q ss_pred             CCceeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhccchHHhhhh
Q psy14740        175 SRSFALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEIRTK  230 (362)
Q Consensus       175 ~~~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~~~~  230 (362)
                      +....+..+.+++++|     .+.++..++.|..+  +.++.++++.|.+++....++..+
T Consensus        69 ~~~~~i~~~~~g~~fGe~~~~~~~~~~~t~~a~~~--~~~~~i~~~~f~~ll~~~~~i~~~  127 (147)
T d1cx4a2          69 NGAVEIARCLRGQYFGELALVTNKPRAASAHAIGT--VKCLAMDVQAFERLLGPCMEIMKR  127 (147)
T ss_dssp             CCEEEEEEECTTCEESCHHHHHTCCCSSEEEEEEE--EEEEEEEHHHHHHHCGGGHHHHHH
T ss_pred             cceeeeeeccCCcEeeehhhcCCCCceEEEEECCC--EEEEEEEHHHHHHHHHHCHHHHHH
Confidence            3445677788899988     46788889999864  999999999999999887666543

>d1o5ua_ b.82.1.8 (A:) Hypothetical protein TM1112 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Hypothetical protein TM1112
domain: Hypothetical protein TM1112
species: Thermotoga maritima [TaxId: 2336]

Probab=88.68  E-value=1.3  Score=29.46  Aligned_cols=57  Identities=18%  Similarity=0.119  Sum_probs=38.9

Q ss_pred             CHHHHHHH-HhhcceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740         18 NQGVILTI-VYFSSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus        18 ~~~~~~~l-~~~~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      +++.+.++ ....-.=.-.+|..=..  -+.+.+..|++|++.|..  .+ |+.   ..++|||.|
T Consensus         8 ~~~~l~~lGv~~~gvW~~~pg~f~~~--y~~~E~~~ileG~v~i~~--~~-G~~---~~~~aGD~~   65 (88)
T d1o5ua_           8 TPEKLKELSVEKWPIWEKEVSEFDWY--YDTNETCYILEGKVEVTT--ED-GKK---YVIEKGDLV   65 (88)
T ss_dssp             CHHHHHHHTGGGSCEEEECSEEEEEE--CSSCEEEEEEEEEEEEEE--TT-CCE---EEEETTCEE
T ss_pred             CHHHHHhcCCcccceEeecCcEEEEE--cCccEEEEEEEeEEEEEc--CC-CCE---EEEeCCCEE
Confidence            77888777 33333445677775443  466899999999999963  33 442   358999987

>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: TM1287-like
domain: Hypothetical protein TTHA0104
species: Thermus thermophilus [TaxId: 274]

Probab=86.23  E-value=2.6  Score=28.48  Aligned_cols=70  Identities=14%  Similarity=0.075  Sum_probs=46.2

Q ss_pred             cceeEecCCCEEEecCCC-CCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeeccccc-CCCcceeeEEecCCCCeE
Q psy14740         29 SSQTFYKEGDYIIRQGAR-GDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQ-GDDLRTANIVAADPEGVS  106 (362)
Q Consensus        29 ~~~~~~~~g~~i~~~g~~-~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~-~~~~r~~~~~A~~~~~~~  106 (362)
                      +....+++|+.+-..--+ .+.+|+|++|++.+...    ++   ...+++||.+    .+ .+.++  .+++.++++++
T Consensus        30 ~~~~~~~PG~~~~~H~H~~~~e~~~vl~G~~~~~~~----~~---~~~l~~Gd~~----~~p~~~~H--~~~n~g~~~~~   96 (105)
T d1v70a_          30 YDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG----EE---EALLAPGMAA----FAPAGAPH--GVRNESASPAL   96 (105)
T ss_dssp             EEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET----TE---EEEECTTCEE----EECTTSCE--EEECCSSSCEE
T ss_pred             EEEEEECCCCCCcceECCCCeEEEEEEeeEEEEEEe----ee---EEEecceEEE----EeCCCCEE--EeEECCCCCEE
Confidence            346678899887766544 46899999999998742    22   2467999976    23 33444  45555446687


Q ss_pred             EEEEe
Q psy14740        107 CLVID  111 (362)
Q Consensus       107 ~~~i~  111 (362)
                      ++.+.
T Consensus        97 ~l~v~  101 (105)
T d1v70a_          97 LLVVT  101 (105)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77664

>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: Soybean (Glycine max), proglycinin [TaxId: 3847]

Probab=85.62  E-value=1.5  Score=33.34  Aligned_cols=54  Identities=9%  Similarity=0.175  Sum_probs=43.3

Q ss_pred             hcceeEecCCCEEEec-CCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCee
Q psy14740         28 FSSQTFYKEGDYIIRQ-GARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFF   82 (362)
Q Consensus        28 ~~~~~~~~~g~~i~~~-g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~f   82 (362)
                      .+....+++|.+..-. --.++.+.+|++|+..+...+++ +....-..+++||+|
T Consensus        43 s~~~~~l~pga~~~PH~H~~A~ei~yV~~G~~~v~~v~~~-g~~~~~~~l~~Gdv~   97 (174)
T d1fxza2          43 SAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCN-GERVFDGELQEGRVL   97 (174)
T ss_dssp             CEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTT-SCEEEEEEEETTCEE
T ss_pred             eEEEeeecCCCEeCCccCCCCCEEEEEEecceEEEEecCC-CceeEEEEEcCCcEE
Confidence            3456778999888776 35688999999999999999876 444556679999998

>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]

Probab=85.20  E-value=1.8  Score=32.90  Aligned_cols=55  Identities=9%  Similarity=0.161  Sum_probs=43.5

Q ss_pred             hcceeEecCCCEEEec-CCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeee
Q psy14740         28 FSSQTFYKEGDYIIRQ-GARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFG   83 (362)
Q Consensus        28 ~~~~~~~~~g~~i~~~-g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fG   83 (362)
                      .+....+.+|.+..-. --.++.+.+|++|+..+...+++ +....-..+++||+|-
T Consensus        48 s~~~v~L~pga~~~PH~H~~A~ei~yV~~G~~~v~~v~~~-~~~~~~~~l~~Gdv~~  103 (173)
T d1od5a2          48 SAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQ-GNAVFDGELRRGQLLV  103 (173)
T ss_dssp             EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT-SCEEEEEEEETTCEEE
T ss_pred             eEEEEEEcCCcEecCccCCCCcEEEEEEecceEEEEEeCC-CceEEeEEecCCcEEE
Confidence            4567889999988776 34578999999999999998876 4434556799999984

>d1o7fa3 b.82.3.2 (A:322-445) Regulatory domain of Epac2, domains 1 and 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory domain of Epac2, domains 1 and 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.86  E-value=1.4  Score=31.11  Aligned_cols=46  Identities=22%  Similarity=0.353  Sum_probs=35.9

Q ss_pred             eeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhccch
Q psy14740        178 FALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLISSL  224 (362)
Q Consensus       178 ~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~  224 (362)
                      ..+..+.+++.||     .+.+|.++++|..+ .|.++.++++.|.+++...
T Consensus        71 ~~~~~~~~G~~fGe~~ll~~~~r~~t~~a~~~-~~~l~~i~~~~f~~il~~~  121 (124)
T d1o7fa3          71 GVVCTLHEGDDFGKLALVNDAPRAASIVLRED-NCHFLRVDKEDFNRILRDV  121 (124)
T ss_dssp             EEEEEEETTCEECGGGGTCCSCCSSEEEESSS-SEEEEEEEHHHHHHHHHHT
T ss_pred             eecccccCCcchhhhHhhCCCceeeEEEEEeC-cEEEEEEcHHHHHHHHhhc
Confidence            3456677788888     46888999998743 5899999999999987654

>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: cAMP-binding domain-like
family: cAMP-binding domain
domain: Regulatory subunit of Protein kinase A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.99  E-value=0.98  Score=32.52  Aligned_cols=51  Identities=18%  Similarity=0.233  Sum_probs=40.3

Q ss_pred             CCceeeeeeccccccc-----cccccccceeeeCCCCceEEEeehhhHHhhccchHHh
Q psy14740        175 SRSFALKQMKKSQVMN-----LDDLRTANIVAADPEGVSCLVIDQETFNQLISSLDEI  227 (362)
Q Consensus       175 ~~~~aiK~~~~~~~~~-----~~~~~~a~~~a~~~~~v~~l~l~~~~f~~~~~~~~~~  227 (362)
                      +....+..+.+++.++     .+.++.+++.|.++  +.++.++++.|.+++..-...
T Consensus        76 ~~~~~~~~l~~g~~fg~~~l~~~~~~~~s~~a~~~--~~~~~i~~~~f~~ll~~~~~~  131 (136)
T d1cx4a1          76 GVGRCVGNYDNRGSFGELALMYNTPRAATITATSP--GALWGLDRVTFRRIIVKNNAK  131 (136)
T ss_dssp             TEEEEEEEEESSCEECHHHHHHCCCCCSEEEESSC--EEEEEEEHHHHHHHHHHHHHH
T ss_pred             cceeeeeccCCccccchHHHhCCCcceEEEEECCC--EEEEEEeHHHHHHHHHhCHHH
Confidence            4455667788888888     46788899888875  999999999999987655443

>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: TM1459-like
domain: Hypothetical protein TM1459
species: Thermotoga maritima [TaxId: 2336]

Probab=83.59  E-value=2.2  Score=29.55  Aligned_cols=72  Identities=17%  Similarity=0.175  Sum_probs=45.0

Q ss_pred             cceeEecCCCEEEecCCCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEE
Q psy14740         29 SSQTFYKEGDYIIRQGARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCL  108 (362)
Q Consensus        29 ~~~~~~~~g~~i~~~g~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~  108 (362)
                      +...++++|..+=..--+.+.+++|++|++.+...    ++   ...+.+||++=.-   .+.++  .+.+.++++++++
T Consensus        38 ~~~~~i~pG~~~~~H~H~~~e~~~vl~G~~~~~~~----~~---~~~l~~Gd~~~ip---~~~~H--~~~n~~~~~~~~l  105 (114)
T d1vj2a_          38 MRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKE----QG---EETVEEGFYIFVE---PNEIH--GFRNDTDSEVEFL  105 (114)
T ss_dssp             EEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECS----SC---EEEEETTEEEEEC---TTCCE--EEECCSSSCEEEE
T ss_pred             EEEEEECCCCCCCceECCCcEEEEEEEceeEEEEe----ee---eeEEecCeEEEEc---CCCeE--EEEeCCCCCEEEE
Confidence            44567888888766555667778899999998732    33   3567999986321   23444  3455444557544


Q ss_pred             -EEeh
Q psy14740        109 -VIDQ  112 (362)
Q Consensus       109 -~i~~  112 (362)
                       .+++
T Consensus       106 ~iip~  110 (114)
T d1vj2a_         106 CLIPK  110 (114)
T ss_dssp             EEEEG
T ss_pred             EEECC
Confidence             4443

>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: TM1287-like
domain: Hypothetical protein TM1287
species: Thermotoga maritima [TaxId: 2336]

Probab=82.52  E-value=3.7  Score=28.41  Aligned_cols=69  Identities=10%  Similarity=0.065  Sum_probs=43.7

Q ss_pred             ceeEecCCCEEEecC-CCCCeEEEEeeeEEEEEEecCCCCcceEEEEecCCCeeecccccCCCcceeeEEecCCCCeEEE
Q psy14740         30 SQTFYKEGDYIIRQG-ARGDTFFIISKGKVKVTMKQPNSTEEKYIRTLYKGDFFGEKALQGDDLRTANIVAADPEGVSCL  108 (362)
Q Consensus        30 ~~~~~~~g~~i~~~g-~~~~~~yii~~G~v~v~~~~~~~~~~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~~~~~~~  108 (362)
                      ....++||..+=..= ...+.+|+|++|++.+...    ++   ...+++||++=   +=.+.  ...+.+.++++++++
T Consensus        42 ~~~~~~PG~~~~~H~H~~~~E~~~vl~G~~~~~~~----~~---~~~l~~Gd~~~---ip~g~--~H~~~N~g~~~~~~l  109 (115)
T d1o4ta_          42 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN----GK---DVPIKAGDVCF---TDSGE--SHSIENTGNTDLEFL  109 (115)
T ss_dssp             EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET----TE---EEEEETTEEEE---ECTTC--EEEEECCSSSCEEEE
T ss_pred             EEEEECCCCCcCCEECCCCcEEEEEEECcceEEEc----Ce---eEEeeccEEEE---ECCCC--eEEEEECCCCCEEEE
Confidence            355689999875443 3346799999999998742    23   34678998752   11233  344555555667776


Q ss_pred             EE
Q psy14740        109 VI  110 (362)
Q Consensus       109 ~i  110 (362)
                      .|
T Consensus       110 ~I  111 (115)
T d1o4ta_         110 AV  111 (115)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]

Probab=80.18  E-value=2.1  Score=32.04  Aligned_cols=75  Identities=20%  Similarity=0.277  Sum_probs=51.2

Q ss_pred             cceeEecCCCEEEec-CCCCCeEEEEeeeEEEEEEecCCCCc-----ceEEEEecCCCeeecccccCCCcceeeEEecCC
Q psy14740         29 SSQTFYKEGDYIIRQ-GARGDTFFIISKGKVKVTMKQPNSTE-----EKYIRTLYKGDFFGEKALQGDDLRTANIVAADP  102 (362)
Q Consensus        29 ~~~~~~~~g~~i~~~-g~~~~~~yii~~G~v~v~~~~~~~~~-----~~~~~~l~~G~~fGE~~l~~~~~r~~~~~A~~~  102 (362)
                      +....+++|..+.-. -..++.+.+|.+|+..+....++|+.     ...-..+++||+|-=    . .-......+.  
T Consensus        22 v~~~~l~p~~~~~PH~h~~A~~i~~V~~G~g~v~~v~~~g~~~~~~~~~~~~~l~~Gdv~vv----P-~G~~~~~~n~--   94 (162)
T d2phla2          22 ISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVI----P-AAYPVAIKAT--   94 (162)
T ss_dssp             EEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEE----C-TTCCEEEEES--
T ss_pred             EEEEEECCCcEeCCccCCCCCEEEEEEEeeeEEEEEecCCccccccceeeEeeecCCcEEEE----C-CCCEEEEEeC--
Confidence            356778999988876 46788999999999999998876543     245677999999742    1 1233455565  


Q ss_pred             CCeEEEEE
Q psy14740        103 EGVSCLVI  110 (362)
Q Consensus       103 ~~~~~~~i  110 (362)
                      .+..++.+
T Consensus        95 ~~~~~v~~  102 (162)
T d2phla2          95 SNVNFTGF  102 (162)
T ss_dssp             SSEEEEEE
T ss_pred             CCceEEEE
Confidence            33555554