Psyllid ID: psy14763


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
MKRLQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccc
ccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccHEHHHHHcccccccccHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
MKRLQGEYDEFKQSVEQLKEQLKQCKtvklgllstpyfednatthflSSLTAGAIATTMTQPLDVLKTramnatpgqfnSMWALVTYTAklgpagffkgyfpafvrlapQTILTFVFLEQLRLNFgfikeespqtk
mkrlqgeydeFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFgfikeespqtk
MKRLQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
*********************LKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFI********
MKRLQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNAT*GQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNF***********
MKRLQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFI********
MKRLQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIK*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooo
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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xxxxxxxxxxxxxxxxxxxxxxxxxxxxKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query136 2.2.26 [Sep-21-2011]
Q9QZD8287 Mitochondrial dicarboxyla yes N/A 0.698 0.331 0.572 1e-24
Q9UBX3287 Mitochondrial dicarboxyla yes N/A 0.698 0.331 0.562 1e-24
P56499308 Mitochondrial uncoupling no N/A 0.698 0.308 0.416 4e-16
P04633307 Mitochondrial brown fat u no N/A 0.691 0.306 0.422 7e-15
P56501308 Mitochondrial uncoupling no N/A 0.698 0.308 0.406 1e-14
P55916312 Mitochondrial uncoupling no N/A 0.669 0.291 0.413 2e-14
O97649308 Mitochondrial uncoupling yes N/A 0.705 0.311 0.381 4e-14
Q8K404307 Mitochondrial brown fat u N/A N/A 0.867 0.384 0.352 5e-14
P25874307 Mitochondrial brown fat u no N/A 0.617 0.273 0.425 5e-14
Q9ER18307 Mitochondrial brown fat u N/A N/A 0.691 0.306 0.412 5e-14
>sp|Q9QZD8|DIC_MOUSE Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2 Back     alignment and function desciption
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 1/96 (1%)

Query: 32  LLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKL 91
           +LST Y  DN  THF+SS  AG  AT + QPLDVLKTR MN + G++  ++     TAKL
Sbjct: 188 VLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTRLMN-SKGEYQGVFHCAMETAKL 246

Query: 92  GPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGF 127
           GP  FFKG FPA +RL P T+LTF+FLEQLR +FG 
Sbjct: 247 GPQAFFKGLFPAGIRLIPHTVLTFMFLEQLRKHFGI 282




Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.
Mus musculus (taxid: 10090)
>sp|Q9UBX3|DIC_HUMAN Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P04633|UCP1_RAT Mitochondrial brown fat uncoupling protein 1 OS=Rattus norvegicus GN=Ucp1 PE=1 SV=2 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P55916|UCP3_HUMAN Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q8K404|UCP1_DICGR Mitochondrial brown fat uncoupling protein 1 OS=Dicrostonyx groenlandicus GN=UCP1 PE=2 SV=1 Back     alignment and function description
>sp|P25874|UCP1_HUMAN Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=1 SV=3 Back     alignment and function description
>sp|Q9ER18|UCP1_PHOSU Mitochondrial brown fat uncoupling protein 1 OS=Phodopus sungorus GN=UCP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
242010640 285 mitochondrial dicarboxylate carrier, put 0.808 0.385 0.772 2e-41
270011578 286 hypothetical protein TcasGA2_TC005615 [T 0.816 0.388 0.747 6e-41
189240286 287 PREDICTED: similar to K11G12.5 [Triboliu 0.816 0.386 0.747 6e-41
170054034 288 mitochondrial dicarboxylate carrier [Cul 0.816 0.385 0.747 2e-40
403183288 288 AAEL017508-PA [Aedes aegypti] gi|4031832 0.816 0.385 0.747 3e-40
312376953 290 hypothetical protein AND_11892 [Anophele 0.823 0.386 0.723 2e-39
193592105 289 PREDICTED: mitochondrial dicarboxylate c 0.801 0.377 0.761 2e-39
195451774 282 GK13938 [Drosophila willistoni] gi|19416 0.757 0.365 0.728 3e-39
156554514 294 PREDICTED: mitochondrial dicarboxylate c 0.786 0.363 0.747 1e-38
195036856 288 GH19040 [Drosophila grimshawi] gi|193894 0.801 0.378 0.688 3e-38
>gi|242010640|ref|XP_002426070.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] gi|212510092|gb|EEB13332.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/110 (77%), Positives = 92/110 (83%)

Query: 21  QLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNS 80
           QL     VK  LLST  F DN TTHFLSS TAGAIATT+TQPLDVLKTRAMNA PG+F+S
Sbjct: 176 QLSFYDQVKTFLLSTNMFSDNLTTHFLSSSTAGAIATTLTQPLDVLKTRAMNAKPGEFSS 235

Query: 81  MWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKE 130
           MW L+ YTAKLGP GFFKGY PAFVRL PQTILTFVFLEQLR+NFGF+K+
Sbjct: 236 MWQLILYTAKLGPLGFFKGYIPAFVRLGPQTILTFVFLEQLRINFGFVKQ 285




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011578|gb|EFA08026.1| hypothetical protein TcasGA2_TC005615 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189240286|ref|XP_973010.2| PREDICTED: similar to K11G12.5 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|170054034|ref|XP_001862945.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] gi|167874415|gb|EDS37798.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|403183288|gb|EJY57985.1| AAEL017508-PA [Aedes aegypti] gi|403183289|gb|EJY57986.1| AAEL017508-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|312376953|gb|EFR23900.1| hypothetical protein AND_11892 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|193592105|ref|XP_001949480.1| PREDICTED: mitochondrial dicarboxylate carrier-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|195451774|ref|XP_002073070.1| GK13938 [Drosophila willistoni] gi|194169155|gb|EDW84056.1| GK13938 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|156554514|ref|XP_001605171.1| PREDICTED: mitochondrial dicarboxylate carrier-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195036856|ref|XP_001989884.1| GH19040 [Drosophila grimshawi] gi|193894080|gb|EDV92946.1| GH19040 [Drosophila grimshawi] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query136
FB|FBgn0027610280 Dic1 "Dicarboxylate carrier 1" 0.720 0.35 0.734 2.7e-36
WB|WBGene00019656290 K11G12.5 [Caenorhabditis elega 0.933 0.437 0.503 3.4e-29
MGI|MGI:1353497287 Slc25a10 "solute carrier famil 0.772 0.365 0.547 6.8e-24
RGD|621430286 Slc25a10 "solute carrier famil 0.772 0.367 0.556 8.7e-24
UNIPROTKB|B4E1E9244 SLC25A10 "cDNA FLJ61034, highl 0.808 0.450 0.535 1.4e-23
UNIPROTKB|Q9UBX3287 SLC25A10 "Mitochondrial dicarb 0.808 0.383 0.535 1.4e-23
UNIPROTKB|B4DLN1442 SLC25A10 "Uncharacterized prot 0.808 0.248 0.535 3.1e-23
UNIPROTKB|H9KUU7442 LOC100848134 "Uncharacterized 0.808 0.248 0.526 4.3e-22
UNIPROTKB|F1MBS4297 LOC100848134 "Uncharacterized 0.764 0.350 0.523 9e-22
UNIPROTKB|F6XRN5442 MRPL12 "Uncharacterized protei 0.772 0.237 0.518 9.3e-22
FB|FBgn0027610 Dic1 "Dicarboxylate carrier 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 72/98 (73%), Positives = 83/98 (84%)

Query:    29 KLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYT 88
             K+ LL+TPYF+DN  THF +SL AG IATT+TQPLDVLKTR+MNA PG+FN +W +V +T
Sbjct:   180 KIYLLATPYFQDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNGLWDIVKHT 239

Query:    89 AKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFG 126
             AKLGP GFFKGY PAFVRL P TI+TFVFLEQLRL FG
Sbjct:   240 AKLGPLGFFKGYVPAFVRLGPHTIITFVFLEQLRLKFG 277




GO:0005310 "dicarboxylic acid transmembrane transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISS;IDA
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0015709 "thiosulfate transport" evidence=IDA
GO:0071423 "malate transmembrane transport" evidence=IDA
GO:0015131 "oxaloacetate transmembrane transporter activity" evidence=IDA
GO:0015116 "sulfate transmembrane transporter activity" evidence=IDA
GO:0015117 "thiosulfate transmembrane transporter activity" evidence=IDA
GO:0035435 "phosphate ion transmembrane transport" evidence=IDA
GO:0071422 "succinate transmembrane transport" evidence=IDA
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA
GO:0015729 "oxaloacetate transport" evidence=IDA
GO:0008272 "sulfate transport" evidence=IDA
GO:0015141 "succinate transmembrane transporter activity" evidence=IDA
GO:0015140 "malate transmembrane transporter activity" evidence=IDA
WB|WBGene00019656 K11G12.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1353497 Slc25a10 "solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621430 Slc25a10 "solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B4E1E9 SLC25A10 "cDNA FLJ61034, highly similar to Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UBX3 SLC25A10 "Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B4DLN1 SLC25A10 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KUU7 LOC100848134 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBS4 LOC100848134 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6XRN5 MRPL12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9QZD8DIC_MOUSENo assigned EC number0.57290.69850.3310yesN/A
Q9UBX3DIC_HUMANNo assigned EC number0.56250.69850.3310yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-17
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 71.5 bits (176), Expect = 2e-17
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 45  HFLSSLTAGAIATTMTQPLDVLKTRAMNATPG---QFNSMWALVTYTAKL-GPAGFFKGY 100
             L+   AGAIA T+T PLDV+KTR  ++  G   ++  +        K  G  G +KG 
Sbjct: 8   SLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGL 67

Query: 101 FPAFVRLAPQTILTFVFLEQLRLNFGFIK 129
            P  +R+AP   + F   E L+       
Sbjct: 68  LPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 136
KOG0764|consensus299 99.95
KOG0768|consensus323 99.95
KOG0752|consensus320 99.94
KOG0764|consensus299 99.94
KOG0753|consensus317 99.94
KOG0759|consensus286 99.94
KOG0752|consensus320 99.93
PTZ00168259 mitochondrial carrier protein; Provisional 99.92
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.92
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.92
KOG0760|consensus302 99.92
KOG0757|consensus319 99.91
KOG0758|consensus297 99.91
KOG0760|consensus302 99.91
PTZ00168259 mitochondrial carrier protein; Provisional 99.91
KOG0761|consensus361 99.9
KOG0757|consensus319 99.9
KOG0762|consensus311 99.9
KOG0765|consensus333 99.9
KOG0751|consensus694 99.88
KOG0770|consensus 353 99.87
KOG0756|consensus299 99.87
KOG0768|consensus323 99.87
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.87
KOG0758|consensus297 99.86
KOG0766|consensus297 99.85
KOG0753|consensus317 99.85
KOG0750|consensus304 99.84
KOG0761|consensus 361 99.84
KOG0754|consensus294 99.84
KOG0762|consensus 311 99.81
KOG0755|consensus320 99.8
KOG0759|consensus286 99.79
KOG0036|consensus463 99.79
KOG0749|consensus298 99.77
KOG0036|consensus463 99.77
KOG0765|consensus333 99.77
KOG0767|consensus 333 99.76
KOG0754|consensus294 99.75
KOG0770|consensus353 99.72
KOG0766|consensus297 99.68
KOG0769|consensus308 99.67
KOG0763|consensus301 99.67
KOG0763|consensus301 99.66
KOG0769|consensus 308 99.66
KOG0751|consensus 694 99.64
KOG0749|consensus298 99.64
KOG0756|consensus299 99.59
KOG0767|consensus333 99.57
KOG0750|consensus304 99.5
KOG0755|consensus320 99.5
KOG1519|consensus297 99.31
KOG2954|consensus427 99.27
KOG2745|consensus321 99.1
KOG1519|consensus297 98.73
KOG2745|consensus 321 97.99
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 95.11
>KOG0764|consensus Back     alignment and domain information
Probab=99.95  E-value=1.4e-28  Score=170.44  Aligned_cols=132  Identities=21%  Similarity=0.242  Sum_probs=113.4

Q ss_pred             ccchhHHHHHHH----HHHHHHHHHHHHHHHHhhccCCCCC-CCHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHhhCC--
Q psy14763          3 RLQGEYDEFKQS----VEQLKEQLKQCKTVKLGLLSTPYFE-DNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP--   75 (136)
Q Consensus         3 ~~rG~~~~~~~~----~~~~~~~f~~y~~~k~~~~~~~~~~-~~~~~~~~ag~~a~~~~~~~~~P~d~vktr~q~~~~--   75 (136)
                      +.||+|+|+...    .+.+++||.+||.+|+.+.+..+.. .+...++.+++.||+++.++|+|++|+|||++.|..  
T Consensus        61 G~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~  140 (299)
T KOG0764|consen   61 GLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV  140 (299)
T ss_pred             hHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc
Confidence            456666666655    5568999999999999997765444 378899999999999999999999999999999864  


Q ss_pred             --CCCCcHHHHHHHHHHh-CccccccchhHHHhhHhHHHHHHHHHHHHHHHHhcCcCCCCCCC
Q psy14763         76 --GQFNSMWALVTYTAKL-GPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQT  135 (136)
Q Consensus        76 --~~~~~~~~~~~~i~~~-G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~~~~~~~~  135 (136)
                        ..|++++|++++|+++ |++|+|+|+.|.++ .+.+.+++|..||.+|.++.+....++++
T Consensus       141 ~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~-GvshgAiQF~~YE~lK~~~~~~~~~~~d~  202 (299)
T KOG0764|consen  141 QSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLL-GVSHGAIQFPAYEELKLRKNRKQGRSTDN  202 (299)
T ss_pred             cccccccHHHHHHHHHHHHhHHHHHhhhhhHhh-hhchhhhhhhhHHHHHHHHHHhcCCCccc
Confidence              3699999999999999 99999999999999 55599999999999999997666665553



>KOG0768|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-13
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 3/109 (2%) Query: 28 VKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSM-WALVT 86 +K LL D+ HF S+ AG T + P+DV+KTR MN+ GQ++S +T Sbjct: 188 IKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALT 247 Query: 87 YTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLR--LNFGFIKEESP 133 K GP F+KG+ P+F+RL ++ FV EQL+ L + E+P Sbjct: 248 MLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP 296

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query136
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-36
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-09
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-05
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-10
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-08
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  125 bits (316), Expect = 2e-36
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 27  TVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVT 86
            +K  LL      D+   HF S+  AG   T +  P+DV+KTR MN+  GQ++S      
Sbjct: 187 LIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCAL 246

Query: 87  YTAK-LGPAGFFKGYFPAFVRLAPQTILTFVFLEQLR--LNFGFIKEESPQT 135
              +  GP  F+KG+ P+F+RL    ++ FV  EQL+  L   +   E+P  
Sbjct: 247 TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAPFH 298


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query136
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.96
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.94
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.94
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.93
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.96  E-value=9.3e-29  Score=177.44  Aligned_cols=126  Identities=29%  Similarity=0.460  Sum_probs=112.8

Q ss_pred             ccchhHHHHHHH----HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHhhCCCCC
Q psy14763          3 RLQGEYDEFKQS----VEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQF   78 (136)
Q Consensus         3 ~~rG~~~~~~~~----~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~P~d~vktr~q~~~~~~~   78 (136)
                      +++|+|+|+...    ++.++++|.+||.+|+.+.+.....++....+++|++||++++++++|+|+||+|+|++....|
T Consensus       159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y  238 (303)
T 2lck_A          159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQY  238 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSC
T ss_pred             ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccccc
Confidence            466777777666    5678999999999999987665445677889999999999999999999999999999876779


Q ss_pred             CcHHHHHHHHHHh-CccccccchhHHHhhHhHHHHHHHHHHHHHHHHhcCc
Q psy14763         79 NSMWALVTYTAKL-GPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFI  128 (136)
Q Consensus        79 ~~~~~~~~~i~~~-G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~k~~~~~~  128 (136)
                      .++++|+++++++ |++|||||+.|+++|.+|..+++|.+||.+|+.+...
T Consensus       239 ~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~  289 (303)
T 2lck_A          239 HSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA  289 (303)
T ss_dssp             CSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred             CCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999 9999999999999999999999999999999987653



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 136
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-06
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 42.8 bits (99), Expect = 3e-06
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 37  YFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMN-----ATPGQFNSMWALVTYTAK- 90
               +    ++ + T  A+A  ++ P D ++ R M           +          AK 
Sbjct: 203 PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKD 262

Query: 91  LGPAGFFKGYFPAFVRLAPQTILTFVFLEQL 121
            GP  FFKG +   +R         V  +++
Sbjct: 263 EGPKAFFKGAWSNVLRGMGGAF-VLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query136
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.91
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.83
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.91  E-value=2.8e-24  Score=151.14  Aligned_cols=115  Identities=19%  Similarity=0.216  Sum_probs=98.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHhhCC-----CCC
Q psy14763          4 LQGEYDEFKQSVEQLKEQLKQCKTVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP-----GQF   78 (136)
Q Consensus         4 ~rG~~~~~~~~~~~~~~~f~~y~~~k~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~P~d~vktr~q~~~~-----~~~   78 (136)
                      ++|....+.+.++.++++|..||.+|+.+.+..  .......++++.+++.+++++++|+|+||+|+|.+..     ..|
T Consensus       172 ~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y  249 (292)
T d1okca_         172 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMY  249 (292)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSC
T ss_pred             hccccccccceehHhhhhhhhccchhhhccccc--ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCC
Confidence            344444445567788999999999999876543  5678889999999999999999999999999999864     248


Q ss_pred             CcHHHHHHHHHHh-CccccccchhHHHhhHhHHHHHHHHHHHHH
Q psy14763         79 NSMWALVTYTAKL-GPAGFFKGYFPAFVRLAPQTILTFVFLEQL  121 (136)
Q Consensus        79 ~~~~~~~~~i~~~-G~~g~y~G~~~~~~~~~~~~~~~~~~ye~~  121 (136)
                      .++++++++++++ |++|||||+.|+++|.++ .++.|.+||.+
T Consensus       250 ~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         250 TGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             SSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            8999999999999 999999999999999765 68999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure