Psyllid ID: psy14889

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
Protein Sequence
MWSCHSVNVGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCSDGDMM
Secondary Structure (PSIPRED)
ccEEEccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHccccccccccccHHHHHHcccccccHHHHHccccccccccccccHHcccccccccEEEEEEEccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHcccccccEEEEEEEEEcccccccEEEEEEcccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccEEEEcccEEEEEEcccccEEcccccccccccccccccccccccccccccccccccccccHHcEEccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHccHHHHcccccccEEEEccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEcccccccHHHEEEcccccEEEccccccccccccccEEEcccccEEcccccccHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHccHHHHcccccccccccHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHcHccccccccccccc
Coil and Loop (DISEMBL)
mwschsvnvgqftiqccdgdfcnngsfpilppsyrelpeYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAiqsdpdcflADADLLRATAAGDSTLREYLDAsltsgsgsglpLLIQRTLAKQISlsecigkgrygevwrgvwHGENVAVKIFFsrdeaswsrETEIYSTVLLRHENILgyigsdmtsrnscTQLWLVTHYHsfgslydhlnrttLNHHQMMKICLSIVNGLVHLHTeifgtqgkpaiahrdiksknilvktngtcviadfGLAVSYSqlsnkmdippnprvgtkrymspeildesinmdcfesfkkADIYALGLVLWEVCRRTKangifeeykapyhdlvpmdpsfddmRKVIcidqqrpvlpnrwvsdsTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAdmyihcsdgdmm
Flexible Loop (DISEMBL)
MWSCHSVNVGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASltsgsgsglpLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIffsrdeaswsRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSqlsnkmdippnprvgTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIfeeykapyhdLVPMDPSFDDMRKVICIdqqrpvlpnrwvSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCSDGDMM
Low Complexity Region (SEG)
MWSCHSVNVGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFladadllrataagdSTLREYLDAsltsgsgsglpllIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCSDGDMM
Disordered region (IsUnstruct)
**SCHSVNVGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS***************YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHC******
Disordered Region (DISOPRED)
MWSC***NVGQFTIQCCDGDFCNNGSFPIL***************YILKLSMAILGPVIVLGMLAAVIVLFMRRNHR****************************************************IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI*****************
Disordered Region (DISEMBL)
********VGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCSDGDMM
Disordered Region (DISPRO)
MWSCHSVNVGQFTIQCCDGDFCNNGSFPILPPS*********RYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKK*****************************TLR****ASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MWSCHSVNVGQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCSDGDMM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	443	2.2.26 [Sep-21-2011]
Q28041	509	Activin receptor type-1 O	yes	N/A	0.916	0.797	0.589	1e-146
Q04771	509	Activin receptor type-1 O	yes	N/A	0.916	0.797	0.589	1e-146
P37172	509	Activin receptor type-1 O	yes	N/A	0.916	0.797	0.589	1e-146
Q90ZK6	504	Activin receptor type-1 O	yes	N/A	0.920	0.809	0.605	1e-145
P80201	509	Activin receptor type-1 O	yes	N/A	0.916	0.797	0.587	1e-145
Q61288	502	Serine/threonine-protein	no	N/A	0.914	0.806	0.572	1e-136
P80203	504	Serine/threonine-protein	no	N/A	0.914	0.803	0.572	1e-133
Q5RAN0	503	Serine/threonine-protein	no	N/A	0.905	0.797	0.574	1e-133
P37023	503	Serine/threonine-protein	no	N/A	0.905	0.797	0.574	1e-133
Q5CD18	503	TGF-beta receptor type-1	no	N/A	0.911	0.803	0.527	1e-123

>sp|Q28041|ACVR1_BOVIN Activin receptor type-1 OS=Bos taurus GN=ACVR1 PE=2 SV=1

 Score =  517 bits (1332), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/417 (58%), Positives = 315/417 (75%), Gaps = 11/417 (2%)

Query: 14  IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMR 73
           ++CC GD+CN      LP   +  P      ++ L++ + IL  V  + +LA ++ + +R
Sbjct: 91  VECCQGDWCNRNITAQLPTKGKSFPGTQ---NFHLEVGLIILSVVFAVCLLACLLGVALR 147

Query: 74  RNHRK--KLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           +  R+  + L  R ++          + L  T  GDSTL + LD S TSGSGSGLP L+Q
Sbjct: 148 KFKRRNQERLNPRDVE------YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFLVQ 201

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRHEN
Sbjct: 202 RTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 261

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HLH 
Sbjct: 262 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHI 321

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTKRY
Sbjct: 322 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 381

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DPSF
Sbjct: 382 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 441

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           +DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 442 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for TGF-beta. May also bind activin.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 3EC: 0

>sp|Q04771|ACVR1_HUMAN Activin receptor type-1 OS=Homo sapiens GN=ACVR1 PE=1 SV=1

 Score =  517 bits (1331), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/417 (58%), Positives = 315/417 (75%), Gaps = 11/417 (2%)

Query: 14  IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMR 73
           ++CC GD+CN      LP   +  P      ++ L++ + IL  V  + +LA ++ + +R
Sbjct: 91  VECCQGDWCNRNITAQLPTKGKSFPGTQ---NFHLEVGLIILSVVFAVCLLACLLGVALR 147

Query: 74  RNHRK--KLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           +  R+  + L  R ++          + L  T  GDSTL + LD S TSGSGSGLP L+Q
Sbjct: 148 KFKRRNQERLNPRDVE------YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFLVQ 201

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRHEN
Sbjct: 202 RTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 261

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HLH 
Sbjct: 262 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHI 321

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTKRY
Sbjct: 322 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 381

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DPSF
Sbjct: 382 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 441

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           +DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 442 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin. May be involved for left-right pattern formation during embryogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|P37172|ACVR1_MOUSE Activin receptor type-1 OS=Mus musculus GN=Acvr1 PE=2 SV=2

 Score =  516 bits (1330), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/417 (58%), Positives = 314/417 (75%), Gaps = 11/417 (2%)

Query: 14  IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMR 73
           ++CC GD+CN      LP   +  P      ++ L++ + IL  V  + +LA ++ + +R
Sbjct: 91  VECCQGDWCNRNITAQLPTKGKSFPGTQ---NFHLEVGLIILSVVFAVCLLACILGVALR 147

Query: 74  RNHRK--KLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           +  R+  + L  R ++          + L  T  GDSTL E LD S TSGSGSGLP L+Q
Sbjct: 148 KFKRRNQERLNPRDVE------YGTIEGLITTNVGDSTLAELLDHSCTSGSGSGLPFLVQ 201

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRHEN
Sbjct: 202 RTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 261

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HLH 
Sbjct: 262 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHI 321

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGK AIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTKRY
Sbjct: 322 EIFGTQGKSAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 381

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DPSF
Sbjct: 382 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 441

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           +DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 442 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin. May be involved in left-right pattern formation during embryogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q90ZK6|ACVR1_CHICK Activin receptor type-1 OS=Gallus gallus GN=ACVR1 PE=2 SV=1

 Score =  516 bits (1329), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/418 (60%), Positives = 313/418 (74%), Gaps = 10/418 (2%)

Query: 14  IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMR 73
           ++CC G  CN      LP S  +  +       +  L + IL PV+VL + + V VL +R
Sbjct: 83  VECCQGYLCNMNITAKLPSSKGQTLQGEAAGYSMETLIIVILAPVVVLVIFSVVAVLIIR 142

Query: 74  R---NHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLI 130
           R   NH ++L       +  D      + L A+  GDSTL + LD S TSGSGSGLP L+
Sbjct: 143 RIQKNHMERL-------NSRDAEYGTIEGLIASNVGDSTLADLLDHSCTSGSGSGLPFLV 195

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TVLLRHE
Sbjct: 196 QRTVARQITLVECVGKGRYGEVWRGQWQGENVAVKIFSSRDEKSWFRETELYNTVLLRHE 255

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NILG+I SDMTSRNS TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HLH
Sbjct: 256 NILGFIASDMTSRNSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH 315

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
            EIFGTQGKPAI+HRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTKR
Sbjct: 316 IEIFGTQGKPAISHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 375

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           YM+PE+LDE+I  DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++DLVP DPS
Sbjct: 376 YMAPEVLDETIQADCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDLVPNDPS 435

Query: 371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           F+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 436 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 493

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|P80201|ACVR1_RAT Activin receptor type-1 OS=Rattus norvegicus GN=Acvr1 PE=2 SV=1

 Score =  516 bits (1328), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/417 (58%), Positives = 313/417 (75%), Gaps = 11/417 (2%)

Query: 14  IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMR 73
           ++CC GD+CN      LP   +  P      ++ L++ + IL  V  + + A ++ + +R
Sbjct: 91  VECCQGDWCNRNVTARLPTKGKSFP---GSQNFHLEVGLIILSVVFAVCLFACILGVALR 147

Query: 74  RNHRK--KLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           +  R+  + L  R ++          + L  T  GDSTL E LD S TSGSGSGLP L+Q
Sbjct: 148 KFKRRNQERLNPRDVE------YGTIEGLITTNVGDSTLAELLDHSCTSGSGSGLPFLVQ 201

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRHEN
Sbjct: 202 RTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 261

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HLH 
Sbjct: 262 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHI 321

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGK AIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTKRY
Sbjct: 322 EIFGTQGKSAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 381

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DPSF
Sbjct: 382 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 441

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           +DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 442 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin. May be involved for left-right pattern formation during embryogenesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q61288|ACVL1_MOUSE Serine/threonine-protein kinase receptor R3 OS=Mus musculus GN=Acvrl1 PE=1 SV=2

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/416 (57%), Positives = 305/416 (73%), Gaps = 11/416 (2%)

Query: 15  QCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRR 74
            CC   FCN+    +L  +  + P      D  L L   ILGPV+ L +L A+  L + R
Sbjct: 87  HCCYRSFCNHNVSLMLEAT--QTPSEEPEVDAHLPL---ILGPVLALPVLVALGALGLWR 141

Query: 75  NHRKKLLAARAIQSDPDCFLADADL-LRATAAGDSTLREYLDASLTSGSGSGLPLLIQRT 133
             R++    R + SD    L ++ L L+A+   DS L ++LD+  T+GSGSGLP L+QRT
Sbjct: 142 VRRRQE-KQRDLHSD----LGESSLILKASEQADSMLGDFLDSDCTTGSGSGLPFLVQRT 196

Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL 193
           +A+Q++L EC+GKGRYGEVWRG WHGE+VAVKIF SRDE SW RETEIY+TVLLRH+NIL
Sbjct: 197 VARQVALVECVGKGRYGEVWRGSWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNIL 256

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G+I SDMTSRNS TQLWL+THYH  GSLYD L R TL     +++ +S   GL HLH EI
Sbjct: 257 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPQLALRLAVSAACGLAHLHVEI 316

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
           FGTQGKPAIAHRD+KS+N+LVK+N  C IAD GLAV +SQ S+ +DI  NPRVGTKRYM+
Sbjct: 317 FGTQGKPAIAHRDLKSRNVLVKSNLQCCIADLGLAVMHSQSSDYLDIGNNPRVGTKRYMA 376

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE+LDE I  DCFES+K  DI+A GLVLWE+ RRT  NGI E+Y+ P++D+VP DPSF+D
Sbjct: 377 PEVLDEHIRTDCFESYKWTDIWAFGLVLWEIARRTIINGIVEDYRPPFYDMVPNDPSFED 436

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           M+KV+C+DQQ P +PNR  +D  L+ + ++M+ECW+ N + RL+ALR+KKTL KL+
Sbjct: 437 MKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKLS 492

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for TGF-beta. May bind activin as well.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|P80203|ACVL1_RAT Serine/threonine-protein kinase receptor R3 OS=Rattus norvegicus GN=Acvrl1 PE=2 SV=2

 Score =  475 bits (1223), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/416 (57%), Positives = 305/416 (73%), Gaps = 11/416 (2%)

Query: 15  QCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRR 74
            CC   FCN+    +L  +  + P      D  L L   ILGPV+ L +L A+  L + R
Sbjct: 89  HCCYRSFCNHNVSLMLEAT--QTPSEEPEVDAHLPL---ILGPVLALLVLVALGTLGLWR 143

Query: 75  NHRKKLLAARAIQSDPDCFLADADL-LRATAAGDSTLREYLDASLTSGSGSGLPLLIQRT 133
             R++    R + SD    L ++ L L+A+  GDS L ++L +  T+GSGSGLP L+QRT
Sbjct: 144 VRRRQE-KQRGLHSD----LGESSLILKASEQGDSMLGDFLVSDCTTGSGSGLPFLVQRT 198

Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL 193
           +A+Q++L EC+GKGRYGEVWRG WHGE+VAVKIF SRDE SW RETEIY+TVLLRH+NIL
Sbjct: 199 VARQVALVECVGKGRYGEVWRGSWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNIL 258

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G+I SDMTSRNS TQLWL+THYH  GSLYD L R TL     +++ +S   GL HLH EI
Sbjct: 259 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPQLALRLAVSAACGLAHLHVEI 318

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
           FGTQGKPAIAHRD+KS+N+LVK+N  C IAD GLAV +SQ S+ +DI  NPRVGTKRYM+
Sbjct: 319 FGTQGKPAIAHRDLKSRNVLVKSNLQCCIADLGLAVMHSQSSDYLDIGNNPRVGTKRYMA 378

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE+LDE I  DCFES+K  DI+A GLVLWE+ RRT  NGI E+Y+ P++D+VP DPSF+D
Sbjct: 379 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIINGIVEDYRPPFYDMVPNDPSFED 438

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           M+KV+C+DQQ P +PNR  +D  L+ + ++M+ECW+ N + RL+ALR+KKTL KL+
Sbjct: 439 MKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKLS 494

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for TGF-beta. May bind activin as well.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q5RAN0|ACVL1_PONAB Serine/threonine-protein kinase receptor R3 OS=Pongo abelii GN=ACVRL1 PE=2 SV=1

 Score =  474 bits (1220), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/418 (57%), Positives = 306/418 (73%), Gaps = 17/418 (4%)

Query: 16  CCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVL---FM 72
           CCD   CN+    +L  +  + P      D  L L   ILGPV+ L  L A+ VL    +
Sbjct: 89  CCDSHLCNHNVSLVLEAT--QSPSEQPGTDGQLAL---ILGPVLALLALVALGVLGLWHV 143

Query: 73  RRNHRKKLLAARAIQSDPDCFLADADL-LRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           RR   K+    R + S+    L ++ L L+A+  GDS L + LD+  T+GSGSGLP L+Q
Sbjct: 144 RRRQEKQ----RGLHSE----LGESSLILKASEQGDSMLGDLLDSDCTTGSGSGLPFLVQ 195

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+Q++L EC+GKGRYGEVWRG+WHGE+VAVKIF SRDE SW RETEIY+TVLLRH+N
Sbjct: 196 RTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDN 255

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSRNS TQLWL+THYH  GSLYD L R TL  H  +++ +S   GL HLH 
Sbjct: 256 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLTVSAACGLAHLHV 315

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGKPAIAHRD KS+N+LVK+N  C IAD GLAV +SQ S+ +DI  NPRVGTKRY
Sbjct: 316 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 375

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE I  DCFES+K  DI+A GLVLWE+ RRT  NGI E+Y+ P++D+VP DPSF
Sbjct: 376 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSF 435

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +DM+KV+C+DQQ P +PNR  +D  L+ + ++M+ECW+ N + RL+ALR+KKTL K++
Sbjct: 436 EDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKIS 493

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for TGF-beta. May bind activin as well.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|P37023|ACVL1_HUMAN Serine/threonine-protein kinase receptor R3 OS=Homo sapiens GN=ACVRL1 PE=1 SV=2

 Score =  474 bits (1219), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/418 (57%), Positives = 306/418 (73%), Gaps = 17/418 (4%)

Query: 16  CCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVL---FM 72
           CCD   CN+    +L  +  + P      D  L L   ILGPV+ L  L A+ VL    +
Sbjct: 89  CCDSHLCNHNVSLVLEAT--QPPSEQPGTDGQLAL---ILGPVLALLALVALGVLGLWHV 143

Query: 73  RRNHRKKLLAARAIQSDPDCFLADADL-LRATAAGDSTLREYLDASLTSGSGSGLPLLIQ 131
           RR   K+    R + S+    L ++ L L+A+  GDS L + LD+  T+GSGSGLP L+Q
Sbjct: 144 RRRQEKQ----RGLHSE----LGESSLILKASEQGDSMLGDLLDSDCTTGSGSGLPFLVQ 195

Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           RT+A+Q++L EC+GKGRYGEVWRG+WHGE+VAVKIF SRDE SW RETEIY+TVLLRH+N
Sbjct: 196 RTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDN 255

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
           ILG+I SDMTSRNS TQLWL+THYH  GSLYD L R TL  H  +++ +S   GL HLH 
Sbjct: 256 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHV 315

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           EIFGTQGKPAIAHRD KS+N+LVK+N  C IAD GLAV +SQ S+ +DI  NPRVGTKRY
Sbjct: 316 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 375

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+LDE I  DCFES+K  DI+A GLVLWE+ RRT  NGI E+Y+ P++D+VP DPSF
Sbjct: 376 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSF 435

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +DM+KV+C+DQQ P +PNR  +D  L+ + ++M+ECW+ N + RL+ALR+KKTL K++
Sbjct: 436 EDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKIS 493

On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for TGF-beta. May bind activin as well.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q5CD18|TGFR1_PIG TGF-beta receptor type-1 OS=Sus scrofa GN=TGFBR1 PE=2 SV=1

 Score =  441 bits (1134), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/417 (52%), Positives = 280/417 (67%), Gaps = 13/417 (3%)

Query: 13  TIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFM 72
           T  CC+ D CN    P + P     P         ++L+  I GPV  + +   ++V   
Sbjct: 93  TTYCCNQDHCNKIELPTVGP----FPGKPPSGLGPVELAAVIAGPVCFVCISLMLMVYIC 148

Query: 73  RRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQR 132
              H + ++  R    +      D  L R   +  +TL++ +    TSGSGSGLPLL+QR
Sbjct: 149 ---HNRTVIHHRVPNEE------DPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQR 199

Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 200 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 259

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           LG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH E
Sbjct: 260 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 319

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM
Sbjct: 320 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 379

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS +
Sbjct: 380 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 439

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 440 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 496

Transmembrane serine/threonine kinase forming with the TGF-beta type II serine/threonine kinase receptor, TGFBR2, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFBR1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways. For instance, TGFBR1 induces TRAF6 autoubiquitination which in turn results in MAP3K7 ubiquitination and activation to trigger apoptosis. Also regulates epithelial to mesenchymal transition through a SMAD-independent signaling pathway through PARD6A phosphorylation and activation.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	443
270011128	553	saxophone [Tribolium castaneum]	0.966	0.773	0.703	0.0
282158073	569	saxophone precursor [Tribolium castaneum	0.966	0.752	0.703	0.0
242022850	589	SAX, putative [Pediculus humanus corpori	0.961	0.723	0.703	0.0
157131637	509	activin receptor type I, putative [Aedes	0.975	0.848	0.678	1e-179
195436440	573	GK22220 [Drosophila willistoni] gi|19416	0.963	0.745	0.672	1e-177
195149654	566	GL10841 [Drosophila persimilis] gi|19410	0.963	0.754	0.671	1e-177
125807251	566	GA15112 [Drosophila pseudoobscura pseudo	0.963	0.754	0.671	1e-177
195474498	570	GE19150 [Drosophila yakuba] gi|194175629	0.963	0.749	0.669	1e-176
194757441	566	GF13635 [Drosophila ananassae] gi|190622	0.950	0.743	0.680	1e-176
194863702	570	GG23304 [Drosophila erecta] gi|190662438	0.957	0.743	0.669	1e-176

>gi|270011128|gb|EFA07576.1| saxophone [Tribolium castaneum]

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/431 (70%), Positives = 362/431 (83%), Gaps = 3/431 (0%)

Query: 10  GQFTIQCCDGDFCNNGSFPILPPSY-RELPEYAQRYDYILKLSMAILGPVIVLGMLAAVI 68
           GQF + CC GDFCN G FP LP  + + +  ++   DY LK++ AILGPV+V+G L A++
Sbjct: 119 GQFQVDCCTGDFCNKGDFPELPILFTKNMTMHSDSVDYALKMTAAILGPVVVIGTLGAIV 178

Query: 69  VLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPL 128
           +  MRR H+++L     +  DPD + A  DLLRATAAGDSTLREYL+ SLTSGSGSGLPL
Sbjct: 179 LYLMRRIHQRRLCLESRL--DPDTYYASDDLLRATAAGDSTLREYLENSLTSGSGSGLPL 236

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR 188
           LIQRT+AKQISL+ECIGKGRYGEVWRG+W GENVAVKIFFSRDEASW+RETEIYST+LLR
Sbjct: 237 LIQRTMAKQISLAECIGKGRYGEVWRGIWFGENVAVKIFFSRDEASWNRETEIYSTILLR 296

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
           HENILGYIGSDMTSRNSCTQLWL+THYH  GSLYDHLNRTTL H Q++++CLSI NGLVH
Sbjct: 297 HENILGYIGSDMTSRNSCTQLWLITHYHPLGSLYDHLNRTTLTHQQLLRLCLSIANGLVH 356

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LHTEIFGT+GKPAIAHRDIKSKNILVK NGTC IADFGLAV++ Q ++++DI  NP+VGT
Sbjct: 357 LHTEIFGTEGKPAIAHRDIKSKNILVKNNGTCCIADFGLAVTHQQATDQLDIGSNPKVGT 416

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
           KRYM+PE+LDE+I MD F+SF++ADIYALGLVLWE+CRRT +NGI E+YK P++D+VP D
Sbjct: 417 KRYMAPEVLDETIRMDYFDSFRRADIYALGLVLWELCRRTVSNGIAEDYKPPFYDVVPND 476

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           PSF+DMRKV+C+DQQRP L NRW SD  L+ M K+M+ECWH N NVRL ALR+KKT++KL
Sbjct: 477 PSFEDMRKVVCVDQQRPSLLNRWASDPILSVMAKLMRECWHHNPNVRLPALRIKKTILKL 536

Query: 429 ACADMYIHCSD 439
              D  I+  D
Sbjct: 537 CSGDNLINLDD 547

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282158073|ref|NP_001164080.1| saxophone precursor [Tribolium castaneum]

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/431 (70%), Positives = 362/431 (83%), Gaps = 3/431 (0%)

Query: 10  GQFTIQCCDGDFCNNGSFPILPPSY-RELPEYAQRYDYILKLSMAILGPVIVLGMLAAVI 68
           GQF + CC GDFCN G FP LP  + + +  ++   DY LK++ AILGPV+V+G L A++
Sbjct: 135 GQFQVDCCTGDFCNKGDFPELPILFTKNMTMHSDSVDYALKMTAAILGPVVVIGTLGAIV 194

Query: 69  VLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPL 128
           +  MRR H+++L     +  DPD + A  DLLRATAAGDSTLREYL+ SLTSGSGSGLPL
Sbjct: 195 LYLMRRIHQRRLCLESRL--DPDTYYASDDLLRATAAGDSTLREYLENSLTSGSGSGLPL 252

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR 188
           LIQRT+AKQISL+ECIGKGRYGEVWRG+W GENVAVKIFFSRDEASW+RETEIYST+LLR
Sbjct: 253 LIQRTMAKQISLAECIGKGRYGEVWRGIWFGENVAVKIFFSRDEASWNRETEIYSTILLR 312

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
           HENILGYIGSDMTSRNSCTQLWL+THYH  GSLYDHLNRTTL H Q++++CLSI NGLVH
Sbjct: 313 HENILGYIGSDMTSRNSCTQLWLITHYHPLGSLYDHLNRTTLTHQQLLRLCLSIANGLVH 372

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LHTEIFGT+GKPAIAHRDIKSKNILVK NGTC IADFGLAV++ Q ++++DI  NP+VGT
Sbjct: 373 LHTEIFGTEGKPAIAHRDIKSKNILVKNNGTCCIADFGLAVTHQQATDQLDIGSNPKVGT 432

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
           KRYM+PE+LDE+I MD F+SF++ADIYALGLVLWE+CRRT +NGI E+YK P++D+VP D
Sbjct: 433 KRYMAPEVLDETIRMDYFDSFRRADIYALGLVLWELCRRTVSNGIAEDYKPPFYDVVPND 492

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           PSF+DMRKV+C+DQQRP L NRW SD  L+ M K+M+ECWH N NVRL ALR+KKT++KL
Sbjct: 493 PSFEDMRKVVCVDQQRPSLLNRWASDPILSVMAKLMRECWHHNPNVRLPALRIKKTILKL 552

Query: 429 ACADMYIHCSD 439
              D  I+  D
Sbjct: 553 CSGDNLINLDD 563

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022850|ref|XP_002431851.1| SAX, putative [Pediculus humanus corporis] gi|212517183|gb|EEB19113.1| SAX, putative [Pediculus humanus corporis]

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/438 (70%), Positives = 367/438 (83%), Gaps = 12/438 (2%)

Query: 10  GQFTIQCCDGDFCNNGSFPILPPS--YRELPE-YAQRYDYILKLSMAILGPVIVLGMLAA 66
           GQ+ + CC+ D+CNNGSFP LP    + ++   Y  +  YILKL++AILGPV+ LG+L  
Sbjct: 148 GQYEVICCEEDYCNNGSFPSLPEVTFHDDVSSIYPDKNIYILKLTLAILGPVVGLGVLGT 207

Query: 67  VIVLFMRRNHRKKLLAARAIQS--------DPDCFLADADLLRATAAGDSTLREYLDASL 118
           +++L MRR H+K+L     + S        D D +  D +L+  TA GDSTLRE+++ SL
Sbjct: 208 IVLLLMRRTHKKRLERQSGLWSKERQNGILDSDAYYTD-ELVHVTAPGDSTLREFMEHSL 266

Query: 119 TSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRE 178
           TSGSGSGLPLLIQRTLAKQISLSECIGKGRYG+VWRGVWHGEN+AVKIFFSRDEASW+RE
Sbjct: 267 TSGSGSGLPLLIQRTLAKQISLSECIGKGRYGQVWRGVWHGENIAVKIFFSRDEASWNRE 326

Query: 179 TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI 238
           TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  GSLYDHLNRT+L HHQMMKI
Sbjct: 327 TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHPLGSLYDHLNRTSLTHHQMMKI 386

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
           CL+IV+GLVHLH+EIFGTQGKPAIAHRD+K+KNIL++ NG+CVIADFGLAV++ Q + +M
Sbjct: 387 CLTIVSGLVHLHSEIFGTQGKPAIAHRDLKTKNILIRMNGSCVIADFGLAVTHVQATGQM 446

Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK 358
           DI  NPRVGTKRYM+PE+L+E++  DCFES+++AD+YALGLVLWEVC +T +NGI +EYK
Sbjct: 447 DIADNPRVGTKRYMAPEVLEETMKTDCFESYRRADMYALGLVLWEVCTKTLSNGIADEYK 506

Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            PYHD+VP DPSF+DMRKV+C+D QRP+L NRW SD TLN M K+MKECWHQN NVRL A
Sbjct: 507 PPYHDVVPNDPSFEDMRKVVCVDGQRPILSNRWSSDPTLNGMGKLMKECWHQNPNVRLPA 566

Query: 419 LRVKKTLIKLACADMYIH 436
           LR+KKTLIKLA AD  IH
Sbjct: 567 LRIKKTLIKLASADPLIH 584

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157131637|ref|XP_001662289.1| activin receptor type I, putative [Aedes aegypti] gi|108871473|gb|EAT35698.1| AAEL012152-PA, partial [Aedes aegypti]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 295/435 (67%), Positives = 362/435 (83%), Gaps = 3/435 (0%)

Query: 10  GQFTIQCCDGDFCNNGSFPILPP-SYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVI 68
           G + I+CC GD+CNNG+FP LPP  Y       +   Y LK++ AILGPV +L + A ++
Sbjct: 74  GTYNIECCTGDYCNNGTFPALPPVEYGNEVMKLESSTYALKMTGAILGPVTMLIVGATIV 133

Query: 69  VLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPL 128
             FMRR+H K+L+A+R+ + DP+ + A  ++LRAT+AGDSTLREYL  S+TSGSGSGLPL
Sbjct: 134 WYFMRRSHHKRLMASRS-KHDPETYYASDEILRATSAGDSTLREYLQHSVTSGSGSGLPL 192

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR 188
           LIQRTLA+Q+SL ECIG+GRYGEVWRG+WHGE+VAVKIFFSRDE SW RETEIYSTVLLR
Sbjct: 193 LIQRTLARQVSLCECIGRGRYGEVWRGIWHGESVAVKIFFSRDEDSWKRETEIYSTVLLR 252

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
           HENILGYIGSDMTSRNSCTQLWL+THY+  GSL+DHLNRT L+HHQM  ICLSI NGLVH
Sbjct: 253 HENILGYIGSDMTSRNSCTQLWLITHYYPLGSLFDHLNRTALSHHQMATICLSIANGLVH 312

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LHTEIFGT+GKPAIAHRD+K+KNILV+ NG+CVIADFGLAV++SQ +NK+D+    RVGT
Sbjct: 313 LHTEIFGTEGKPAIAHRDLKTKNILVRINGSCVIADFGLAVTHSQTTNKIDMGNTARVGT 372

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
           KRYM+PE+LDESINM+CFES +KADIYA+GL+ WE+CRRT +NGI E+YK P++D V  D
Sbjct: 373 KRYMAPEVLDESINMECFESLRKADIYAIGLMFWEICRRTLSNGIAEDYKVPFYDCVTSD 432

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           PSF++MRKV+C D  RP +PNRWVSD  L+ M K+M+ECWH N+NVRL ALR+KKTL+KL
Sbjct: 433 PSFEEMRKVVCGDNYRPSIPNRWVSDPLLSGMAKLMRECWHANSNVRLPALRIKKTLLKL 492

Query: 429 ACADMYIHCS-DGDM 442
           A  D  +  + DG++
Sbjct: 493 ASLDETVKLNYDGEI 507

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195436440|ref|XP_002066176.1| GK22220 [Drosophila willistoni] gi|194162261|gb|EDW77162.1| GK22220 [Drosophila willistoni]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/430 (67%), Positives = 358/430 (83%), Gaps = 3/430 (0%)

Query: 8   NVGQF-TIQCCDGDFCNNGSFPILPPSY-RELPEYAQRYDYILKLSMAILGPVIVLGMLA 65
           N   F  ++CC GDFCN+G FP LPP    ++         + K+++AILGP +V+ ++ 
Sbjct: 136 NTANFVNVECCTGDFCNSGEFPELPPFMGNDVTVITADSSNMSKMALAILGPFLVITLMG 195

Query: 66  AVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSG 125
           AV + FMRR+HRK+L A+R I+ DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSG
Sbjct: 196 AVAIFFMRRSHRKRLAASR-IKQDPESYLVNDELLRATSAGDSTLREYLQHSVTSGSGSG 254

Query: 126 LPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTV 185
           LPLL+QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYSTV
Sbjct: 255 LPLLVQRTLAKQVTLLECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTV 314

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
           LLRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NG
Sbjct: 315 LLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNPLSHNDMICICLSIANG 374

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           LVHLHTEIFGT+GKPA+AHRD+KSKNILV +NGTCVIADFGLAV++S ++ ++D+  NP+
Sbjct: 375 LVHLHTEIFGTEGKPAMAHRDLKSKNILVTSNGTCVIADFGLAVTHSHVTGQLDMGNNPK 434

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
           VGTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+V
Sbjct: 435 VGTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVV 494

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
           PMDPSF+DMRKV+CID  RP +PNRW SDS L  M+K+MKECWHQN NVRL ALR+KKT+
Sbjct: 495 PMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLLAGMSKLMKECWHQNPNVRLPALRIKKTI 554

Query: 426 IKLACADMYI 435
            KLA  D  I
Sbjct: 555 HKLAATDEKI 564

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195149654|ref|XP_002015771.1| GL10841 [Drosophila persimilis] gi|194109618|gb|EDW31661.1| GL10841 [Drosophila persimilis]

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/429 (67%), Positives = 356/429 (82%), Gaps = 2/429 (0%)

Query: 8   NVGQFTIQCCDGDFCNNGSFPILPPSYR-ELPEYAQRYDYILKLSMAILGPVIVLGMLAA 66
           N  ++ + CC GDFCN+G FP LPP    ++         I K+S AILGP +++ +L A
Sbjct: 130 NAAKYNVACCTGDFCNSGDFPELPPIVSGDVTVITADTSNISKMSAAILGPFLIITLLGA 189

Query: 67  VIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGL 126
           V + ++RR+HRK+L A+R  Q DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSGL
Sbjct: 190 VAIYYIRRSHRKRLAASRTKQ-DPESYLVNDELLRATSAGDSTLREYLQHSVTSGSGSGL 248

Query: 127 PLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL 186
           PLL+QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYSTVL
Sbjct: 249 PLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTVL 308

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           LRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NGL
Sbjct: 309 LRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMIWICLSIANGL 368

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
           VHLHTEIFGT+GKPA+AHRD+KSKNILV +NGTCVIADFGLAV++S ++ ++D+  NP+V
Sbjct: 369 VHLHTEIFGTEGKPAMAHRDLKSKNILVTSNGTCVIADFGLAVTHSHVTGQLDLGHNPKV 428

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           GTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+VP
Sbjct: 429 GTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVP 488

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI 426
           MDPSF+DMRKV+C D  RP +PNRW SDS L  M+K+MKECWHQN NVRL ALR+KKT+ 
Sbjct: 489 MDPSFEDMRKVVCTDNYRPSIPNRWSSDSLLAGMSKLMKECWHQNPNVRLPALRIKKTIH 548

Query: 427 KLACADMYI 435
           KLA AD  I
Sbjct: 549 KLASADEKI 557

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125807251|ref|XP_001360323.1| GA15112 [Drosophila pseudoobscura pseudoobscura] gi|54635495|gb|EAL24898.1| GA15112 [Drosophila pseudoobscura pseudoobscura]

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 288/429 (67%), Positives = 356/429 (82%), Gaps = 2/429 (0%)

Query: 8   NVGQFTIQCCDGDFCNNGSFPILPPSYR-ELPEYAQRYDYILKLSMAILGPVIVLGMLAA 66
           N  ++ + CC GDFCN+G FP LPP    ++         I K+S AILGP +++ +L A
Sbjct: 130 NAAKYNVACCTGDFCNSGDFPELPPIVSGDVTVITADTSNISKMSAAILGPFLIITLLGA 189

Query: 67  VIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGL 126
           V + ++RR+HRK+L A+R  Q DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSGL
Sbjct: 190 VAIYYIRRSHRKRLAASRTKQ-DPESYLVNDELLRATSAGDSTLREYLQHSVTSGSGSGL 248

Query: 127 PLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL 186
           PLL+QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYSTVL
Sbjct: 249 PLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTVL 308

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           LRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NGL
Sbjct: 309 LRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMIWICLSIANGL 368

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
           VHLHTEIFGT+GKPA+AHRD+KSKNILV +NGTCVIADFGLAV++S ++ ++D+  NP+V
Sbjct: 369 VHLHTEIFGTEGKPAMAHRDLKSKNILVTSNGTCVIADFGLAVTHSHVTGQLDLGHNPKV 428

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           GTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+VP
Sbjct: 429 GTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVP 488

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI 426
           MDPSF+DMRKV+C D  RP +PNRW SDS L  M+K+MKECWHQN NVRL ALR+KKT+ 
Sbjct: 489 MDPSFEDMRKVVCTDNYRPSIPNRWSSDSLLAGMSKLMKECWHQNPNVRLPALRIKKTIH 548

Query: 427 KLACADMYI 435
           KLA AD  I
Sbjct: 549 KLASADEKI 557

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195474498|ref|XP_002089528.1| GE19150 [Drosophila yakuba] gi|194175629|gb|EDW89240.1| GE19150 [Drosophila yakuba]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/430 (66%), Positives = 357/430 (83%), Gaps = 3/430 (0%)

Query: 8   NVGQF-TIQCCDGDFCNNGSFP-ILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLA 65
           N G+F  + CC GD+CN G FP +LP    ++         I K+S+AILGP +V+ +L 
Sbjct: 133 NTGKFVNVVCCAGDYCNEGDFPELLPFDSNDVTVITADTSSISKMSVAILGPFLVIALLG 192

Query: 66  AVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSG 125
           AV + F+RR+HRK+L A+R  Q DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSG
Sbjct: 193 AVTIFFIRRSHRKRLAASRTKQ-DPEAYLVNDELLRATSAGDSTLREYLQHSVTSGSGSG 251

Query: 126 LPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTV 185
           LPLL+QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYST+
Sbjct: 252 LPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTI 311

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
           LLRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NG
Sbjct: 312 LLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANG 371

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           LVHLHTEIFG QGKPA+AHRD+KSKNILV +NG+CVIADFGLAV++S ++ ++D+  NP+
Sbjct: 372 LVHLHTEIFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPK 431

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
           VGTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+V
Sbjct: 432 VGTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVV 491

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
           PMDPSF+DMRKV+CID  RP +PNRW SDS L  M+K+M+ECWHQN NVRL ALR+KKT+
Sbjct: 492 PMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLLAGMSKLMRECWHQNPNVRLPALRIKKTI 551

Query: 426 IKLACADMYI 435
            KLA AD  I
Sbjct: 552 HKLASADEKI 561

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757441|ref|XP_001960973.1| GF13635 [Drosophila ananassae] gi|190622271|gb|EDV37795.1| GF13635 [Drosophila ananassae]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/423 (68%), Positives = 351/423 (82%), Gaps = 2/423 (0%)

Query: 14  IQCCDGDFCNNGSFPILPPSY-RELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFM 72
           ++CC GD+CN G FP LPP    ++         I K+S AILGP +V+ +L AV + F+
Sbjct: 136 VECCTGDYCNKGDFPELPPMISNDVTVITADTSNISKMSAAILGPFLVITLLGAVAIYFI 195

Query: 73  RRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQR 132
           RR+HRK+L A+R  Q DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSGLPLL+QR
Sbjct: 196 RRSHRKRLAASRTKQ-DPESYLVNDELLRATSAGDSTLREYLQHSVTSGSGSGLPLLVQR 254

Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           TLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYSTVLLRHENI
Sbjct: 255 TLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTVLLRHENI 314

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           LG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NGLVHLHTE
Sbjct: 315 LGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMIWICLSIANGLVHLHTE 374

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           IFG QGKPA+AHRD+KSKNILV  NG+CVIADFGLAV++S ++ ++D+  NP+VGTKRYM
Sbjct: 375 IFGKQGKPAMAHRDLKSKNILVTANGSCVIADFGLAVTHSHVTGQLDLGNNPKVGTKRYM 434

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+LDESIN++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+VPMDPSF+
Sbjct: 435 APEVLDESINLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVPMDPSFE 494

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
           DMRKV+C D  RP +PNRW SDS L  M+K+MKECWHQN NVRL ALR+KKT+ KLA AD
Sbjct: 495 DMRKVVCTDNYRPSIPNRWTSDSLLAGMSKLMKECWHQNPNVRLPALRIKKTIHKLASAD 554

Query: 433 MYI 435
             I
Sbjct: 555 EKI 557

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194863702|ref|XP_001970571.1| GG23304 [Drosophila erecta] gi|190662438|gb|EDV59630.1| GG23304 [Drosophila erecta]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 286/427 (66%), Positives = 357/427 (83%), Gaps = 3/427 (0%)

Query: 8   NVGQF-TIQCCDGDFCNNGSFP-ILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLA 65
           N G+F  + CC GD+CN G FP +LP    ++         I K+S+AILGP++V+ +L 
Sbjct: 133 NTGKFVNVVCCTGDYCNEGDFPELLPFDSNDVTVITADTSSISKMSVAILGPILVIALLG 192

Query: 66  AVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSGSGSG 125
           A+ + F+RR+HRK+L A+R  + DP+ +L + +LLRAT+AGDSTLREYL  S+TSGSGSG
Sbjct: 193 AMTIFFIRRSHRKRLAASRT-KHDPEAYLVNDELLRATSAGDSTLREYLQHSVTSGSGSG 251

Query: 126 LPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTV 185
           LPLL+QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYST+
Sbjct: 252 LPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTI 311

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
           LLRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NG
Sbjct: 312 LLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANG 371

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           LVHLHTEIFG QGKPA+AHRD+KSKNILV +NG+CVIADFGLAV++S ++ ++D+  NP+
Sbjct: 372 LVHLHTEIFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPK 431

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
           VGTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+V
Sbjct: 432 VGTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVV 491

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
           PMDPSF+DMRKV+CID  RP +PNRW SDS L  M+K+MKECWHQN NVRL ALR+KKT+
Sbjct: 492 PMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLLAGMSKLMKECWHQNPNVRLPALRIKKTI 551

Query: 426 IKLACAD 432
            KLA AD
Sbjct: 552 HKLASAD 558

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	443
FB|FBgn0003317	570	sax "saxophone" [Drosophila me	0.957	0.743	0.615	2.7e-148
UNIPROTKB|Q90ZK6	504	ACVR1 "Activin receptor type-1	0.918	0.807	0.570	2.3e-126
UNIPROTKB|E2RKJ3	469	ACVR1 "Uncharacterized protein	0.927	0.876	0.560	9.9e-126
UNIPROTKB|A2VDM5	509	ACVR1 "Activin A receptor, typ	0.927	0.807	0.558	5.5e-125
UNIPROTKB|Q28041	509	ACVR1 "Activin receptor type-1	0.927	0.807	0.558	5.5e-125
UNIPROTKB|Q04771	509	ACVR1 "Activin receptor type-1	0.927	0.807	0.558	5.5e-125
UNIPROTKB|E9M2M1	509	ACVR1 "Uncharacterized protein	0.927	0.807	0.558	5.5e-125
MGI|MGI:87911	509	Acvr1 "activin A receptor, typ	0.927	0.807	0.558	1.1e-124
ZFIN|ZDB-GENE-990415-9	506	acvr1l "activin A receptor, ty	0.952	0.833	0.549	1.1e-124
RGD|620200	509	Acvr1 "activin A receptor, typ	0.927	0.807	0.556	2.4e-124

FB|FBgn0003317 sax "saxophone" [Drosophila melanogaster (taxid:7227)]

 Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
 Identities = 263/427 (61%), Positives = 330/427 (77%)

Query:     8 NVGQFT-IQCCDGDFCNNGSFP-ILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLA 65
             N G+F  + CC GD+CN G FP +LP    ++         I K+ +A+LGP +V+ +L 
Sbjct:   133 NTGKFVNVVCCAGDYCNEGDFPELLPFDSNDVTVITADTSSISKMLVAVLGPFLVIALLG 192

Query:    66 AVIVLFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXX 125
             AV + F+RR+HRK+L A+R  Q DP+ +              STLREYL           
Sbjct:   193 AVTIFFIRRSHRKRLAASRTKQ-DPEAYLVNDELLRATSAGDSTLREYLQHSVTSGSGSG 251

Query:   126 XXXXIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTV 185
                 +QRTLAKQ++L ECIG+G+YGEVWRG WHGE++AVKIFFSRDE SW RETEIYST+
Sbjct:   252 LPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTI 311

Query:   186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
             LLRHENILG+IGSDMTSRNSCTQLWL+THY+  GSL+DHLNR  L+H+ M+ ICLSI NG
Sbjct:   312 LLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANG 371

Query:   246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
             LVHLHTEIFG QGKPA+AHRD+KSKNILV +NG+CVIADFGLAV++S ++ ++D+  NP+
Sbjct:   372 LVHLHTEIFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPK 431

Query:   306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
             VGTKRYM+PE+LDESI+++CFE+ ++ DIYA GLVLWEVCRRT + GI EEYK P++D+V
Sbjct:   432 VGTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVV 491

Query:   366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
             PMDPSF+DMRKV+CID  RP +PNRW SDS +  M+K+MKECWHQN +VRL ALR+KKT+
Sbjct:   492 PMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLMTGMSKLMKECWHQNPDVRLPALRIKKTI 551

Query:   426 IKLACAD 432
              KLA AD
Sbjct:   552 HKLASAD 558

GO:0008358 "maternal determination of anterior/posterior axis, embryo" evidence=IGI;IMP

GO:0008101 "decapentaplegic signaling pathway" evidence=IGI;IMP

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=ISS;NAS;IDA

GO:0005886 "plasma membrane" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISS;NAS

GO:0009953 "dorsal/ventral pattern formation" evidence=IGI;IMP

GO:0030509 "BMP signaling pathway" evidence=TAS

GO:0007304 "chorion-containing eggshell formation" evidence=IGI

GO:0048477 "oogenesis" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0030707 "ovarian follicle cell development" evidence=IMP;TAS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0007448 "anterior/posterior pattern specification, imaginal disc" evidence=IMP

GO:0042078 "germ-line stem cell division" evidence=IMP

GO:0030718 "germ-line stem cell maintenance" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0007300 "ovarian nurse cell to oocyte transport" evidence=TAS

GO:0001745 "compound eye morphogenesis" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IMP

GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=IGI;IDA

GO:0035222 "wing disc pattern formation" evidence=IMP

UNIPROTKB|Q90ZK6 ACVR1 "Activin receptor type-1" [Gallus gallus (taxid:9031)]

 Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
 Identities = 239/419 (57%), Positives = 299/419 (71%)

Query:    14 IQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILK-LSMAILGPVIVLGMLAAVIVLFM 72
             ++CC G  CN      LP S  +  +  +   Y ++ L + IL PV+VL + + V VL +
Sbjct:    83 VECCQGYLCNMNITAKLPSSKGQTLQ-GEAAGYSMETLIIVILAPVVVLVIFSVVAVLII 141

Query:    73 RR---NHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             RR   NH ++L       +  D                STL + LD              
Sbjct:   142 RRIQKNHMERL-------NSRDAEYGTIEGLIASNVGDSTLADLLDHSCTSGSGSGLPFL 194

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TVLLRH
Sbjct:   195 VQRTVARQITLVECVGKGRYGEVWRGQWQGENVAVKIFSSRDEKSWFRETELYNTVLLRH 254

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSRNS TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   255 ENILGFIASDMTSRNSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 314

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAI+HRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   315 HIEIFGTQGKPAISHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 374

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I  DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++DLVP DP
Sbjct:   375 RYMAPEVLDETIQADCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDLVPNDP 434

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   435 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 493

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0002526 "acute inflammatory response" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA

GO:0003183 "mitral valve morphogenesis" evidence=IEA

GO:0003289 "atrial septum primum morphogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0060923 "cardiac muscle cell fate commitment" evidence=IEA

GO:0061445 "endocardial cushion cell fate commitment" evidence=IEA

GO:2000017 "positive regulation of determination of dorsal identity" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IDA

GO:0016477 "cell migration" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0060317 "cardiac epithelial to mesenchymal transition" evidence=IMP

GO:0010718 "positive regulation of epithelial to mesenchymal transition" evidence=IMP

GO:0048762 "mesenchymal cell differentiation" evidence=IMP

GO:0050431 "transforming growth factor beta binding" evidence=IDA;TAS;IPI

GO:0010694 "positive regulation of alkaline phosphatase activity" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0042118 "endothelial cell activation" evidence=IMP

GO:0001707 "mesoderm formation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0042325 "regulation of phosphorylation" evidence=IPI

GO:0005057 "receptor signaling protein activity" evidence=IMP

GO:0030510 "regulation of BMP signaling pathway" evidence=IDA

GO:0048185 "activin binding" evidence=TAS

GO:0032330 "regulation of chondrocyte differentiation" evidence=IGI

GO:0030278 "regulation of ossification" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=IMP

GO:0051216 "cartilage development" evidence=IEP

UNIPROTKB|E2RKJ3 ACVR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
 Identities = 235/419 (56%), Positives = 300/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  PE  Q +   L++ + IL  V  + +LA ++ 
Sbjct:    48 GQ-AVECCQGDWCNRNITAQLPTKGKSFPE-TQNFH--LEVGLIILSVVFAVCLLACLLG 103

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL + LD              
Sbjct:   104 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFL 159

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   160 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 219

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   220 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 279

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   280 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 339

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   340 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 399

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   400 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 458

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005024 "transforming growth factor beta-activated receptor activity" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|A2VDM5 ACVR1 "Activin A receptor, type I" [Bos taurus (taxid:9913)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 234/419 (55%), Positives = 299/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P   Q +   L++ + IL  V  + +LA ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNITAQLPTKGKSFPG-TQNFH--LEVGLIILSVVFAVCLLACLLG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL + LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:2000017 "positive regulation of determination of dorsal identity" evidence=IEA

GO:0061445 "endocardial cushion cell fate commitment" evidence=IEA

GO:0060923 "cardiac muscle cell fate commitment" evidence=IEA

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

GO:0050431 "transforming growth factor beta binding" evidence=IEA

GO:0048185 "activin binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=IEA

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IEA

GO:0003289 "atrial septum primum morphogenesis" evidence=IEA

GO:0003183 "mitral valve morphogenesis" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA

GO:0002526 "acute inflammatory response" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q28041 ACVR1 "Activin receptor type-1" [Bos taurus (taxid:9913)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 234/419 (55%), Positives = 299/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P   Q +   L++ + IL  V  + +LA ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNITAQLPTKGKSFPG-TQNFH--LEVGLIILSVVFAVCLLACLLG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL + LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:0048179 "activin receptor complex" evidence=ISS

GO:0001655 "urogenital system development" evidence=ISS

GO:0050431 "transforming growth factor beta binding" evidence=ISS

GO:0016361 "activin receptor activity, type I" evidence=ISS

GO:0009790 "embryo development" evidence=ISS

GO:0007507 "heart development" evidence=ISS

GO:0007368 "determination of left/right symmetry" evidence=ISS

GO:0007281 "germ cell development" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0001755 "neural crest cell migration" evidence=ISS

GO:0001701 "in utero embryonic development" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005024 "transforming growth factor beta-activated receptor activity" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q04771 ACVR1 "Activin receptor type-1" [Homo sapiens (taxid:9606)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 234/419 (55%), Positives = 299/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P   Q +   L++ + IL  V  + +LA ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNITAQLPTKGKSFPG-TQNFH--LEVGLIILSVVFAVCLLACLLG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL + LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:0046872 "metal ion binding" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001655 "urogenital system development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0002526 "acute inflammatory response" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0071385 "cellular response to glucocorticoid stimulus" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=IDA

GO:0017046 "peptide hormone binding" evidence=NAS

GO:0048185 "activin binding" evidence=IDA

GO:0050431 "transforming growth factor beta binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=RCA

GO:0048179 "activin receptor complex" evidence=IDA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0030278 "regulation of ossification" evidence=IMP

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0009968 "negative regulation of signal transduction" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=IMP

GO:0005524 "ATP binding" evidence=IDA

GO:0046332 "SMAD binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0030501 "positive regulation of bone mineralization" evidence=IMP

GO:0030509 "BMP signaling pathway" evidence=IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0003289 "atrial septum primum morphogenesis" evidence=IMP

GO:0003183 "mitral valve morphogenesis" evidence=IMP

GO:0032924 "activin receptor signaling pathway" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:2000017 "positive regulation of determination of dorsal identity" evidence=IDA

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=IDA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IMP

GO:0061445 "endocardial cushion cell fate commitment" evidence=IMP

GO:0060923 "cardiac muscle cell fate commitment" evidence=IMP

UNIPROTKB|E9M2M1 ACVR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 234/419 (55%), Positives = 299/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P   Q +   L++ + IL  V  + +LA ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNITAQLPTKGKSFPG-TQNFH--LEVGLIILSVVFAVCLLACLLG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL + LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLADLLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:2000017 "positive regulation of determination of dorsal identity" evidence=IEA

GO:0061445 "endocardial cushion cell fate commitment" evidence=IEA

GO:0060923 "cardiac muscle cell fate commitment" evidence=IEA

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0051145 "smooth muscle cell differentiation" evidence=IEA

GO:0050431 "transforming growth factor beta binding" evidence=IEA

GO:0048185 "activin binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=IEA

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IEA

GO:0003289 "atrial septum primum morphogenesis" evidence=IEA

GO:0003183 "mitral valve morphogenesis" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA

GO:0002526 "acute inflammatory response" evidence=IEA

GO:0001755 "neural crest cell migration" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:87911 Acvr1 "activin A receptor, type 1" [Mus musculus (taxid:10090)]

 Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
 Identities = 234/419 (55%), Positives = 298/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P   Q +   L++ + IL  V  + +LA ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNITAQLPTKGKSFPG-TQNFH--LEVGLIILSVVFAVCLLACILG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL E LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLAELLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGK AIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKSAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IMP

GO:0001655 "urogenital system development" evidence=ISO

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001702 "gastrulation with mouth forming second" evidence=IMP

GO:0001707 "mesoderm formation" evidence=IMP

GO:0001755 "neural crest cell migration" evidence=IMP

GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO

GO:0003183 "mitral valve morphogenesis" evidence=ISO

GO:0003289 "atrial septum primum morphogenesis" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=IEA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISO

GO:0005024 "transforming growth factor beta-activated receptor activity" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IDA

GO:0005524 "ATP binding" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0007178 "transmembrane receptor protein serine/threonine kinase signaling pathway" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO;IDA;TAS

GO:0007281 "germ cell development" evidence=IMP

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:0007369 "gastrulation" evidence=IMP

GO:0007498 "mesoderm development" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009968 "negative regulation of signal transduction" evidence=ISO

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=ISO;IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISO

GO:0019838 "growth factor binding" evidence=IDA

GO:0023014 "signal transduction by phosphorylation" evidence=ISO

GO:0030278 "regulation of ossification" evidence=ISO

GO:0030501 "positive regulation of bone mineralization" evidence=ISO

GO:0030509 "BMP signaling pathway" evidence=ISO

GO:0032924 "activin receptor signaling pathway" evidence=ISO;IDA

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0045177 "apical part of cell" evidence=IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0046332 "SMAD binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048179 "activin receptor complex" evidence=ISO

GO:0048185 "activin binding" evidence=ISO;IPI

GO:0050431 "transforming growth factor beta binding" evidence=ISO;IDA

GO:0051145 "smooth muscle cell differentiation" evidence=IMP

GO:0060037 "pharyngeal system development" evidence=IMP

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=ISO

GO:0060923 "cardiac muscle cell fate commitment" evidence=ISO

GO:0061445 "endocardial cushion cell fate commitment" evidence=ISO

GO:2000017 "positive regulation of determination of dorsal identity" evidence=ISO

ZFIN|ZDB-GENE-990415-9 acvr1l "activin A receptor, type I like" [Danio rerio (taxid:7955)]

 Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
 Identities = 235/428 (54%), Positives = 301/428 (70%)

Query:     3 SCHSVNVGQFTIQCCDGDFCN-NGSFPILPPSYRELPEYAQRYDYILK-LSMAILGPVIV 60
             +C +       ++CC    CN N S   L       PE  +   Y ++ L + +LGP +V
Sbjct:    72 TCSATASASHVVECCSQHMCNANVSKETLLRLLLTSPEEEKSVHYRVEMLVLFVLGPFVV 131

Query:    61 LGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXX 120
             LG+L+ + +L  RR H  +L   R  + D +                STL + +D     
Sbjct:   132 LGLLSFLALLVCRRLHHGRL--ERLHEFDTE--QGAIDGLIASNVGDSTLADLMDHSCTS 187

Query:   121 XXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETE 180
                      +QRT+A+QISL EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE
Sbjct:   188 GSGSGLPFLVQRTVARQISLVECVGKGRYGEVWRGQWQGENVAVKIFSSRDEKSWFRETE 247

Query:   181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
             IY+TVLLRHENILG++ SDMTSRNS TQLWL+THYH  GSLYD+L R  +     + +  
Sbjct:   248 IYNTVLLRHENILGFMASDMTSRNSSTQLWLITHYHENGSLYDYLQRVAVEMADGLHMAA 307

Query:   241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
             SI +GLVHLHTEIFGT+GKPAIAHRD+KSKNILVK +  C IAD GLAV+++Q  N++D+
Sbjct:   308 SIASGLVHLHTEIFGTEGKPAIAHRDLKSKNILVKKDLQCCIADLGLAVTHTQSDNQLDV 367

Query:   301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
               NP+VGTKRYM+PE+LDE+I  DCF+++K+ DI+A GLVLWE+ RRT +NGI EEYK P
Sbjct:   368 GNNPKVGTKRYMAPEVLDETIQTDCFDAYKRVDIWAFGLVLWEIARRTISNGIVEEYKPP 427

Query:   361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
             ++DLVP DPSFDDMRKV+C++QQRP +PNRW SD TL+A+ K+MKECW+QN + RL+ALR
Sbjct:   428 FYDLVPNDPSFDDMRKVVCVEQQRPFIPNRWFSDPTLSALVKLMKECWYQNPSARLTALR 487

Query:   421 VKKTLIKL 428
             +KKTL K+
Sbjct:   488 IKKTLDKI 495

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005024 "transforming growth factor beta-activated receptor activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009953 "dorsal/ventral pattern formation" evidence=IGI;IMP

GO:0035162 "embryonic hemopoiesis" evidence=IMP

GO:0048264 "determination of ventral identity" evidence=IDA;IMP

GO:0001889 "liver development" evidence=IMP

GO:0003230 "cardiac atrium development" evidence=IMP

GO:0048368 "lateral mesoderm development" evidence=IMP

GO:0051260 "protein homooligomerization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0070724 "BMP receptor complex" evidence=IDA

GO:0003342 "proepicardium development" evidence=IMP

GO:0030509 "BMP signaling pathway" evidence=IGI

GO:0030510 "regulation of BMP signaling pathway" evidence=IGI;IMP

GO:0051216 "cartilage development" evidence=IMP

GO:0007420 "brain development" evidence=IMP

GO:0042476 "odontogenesis" evidence=IEP

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:0001947 "heart looping" evidence=IMP

GO:0003143 "embryonic heart tube morphogenesis" evidence=IMP

GO:0003146 "heart jogging" evidence=IMP

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0001944 "vasculature development" evidence=IMP

GO:0035124 "embryonic caudal fin morphogenesis" evidence=IMP

GO:0061371 "determination of heart left/right asymmetry" evidence=IMP

GO:0035462 "determination of left/right asymmetry in diencephalon" evidence=IMP

GO:0003140 "determination of left/right asymmetry in lateral mesoderm" evidence=IMP

GO:0009952 "anterior/posterior pattern specification" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0035050 "embryonic heart tube development" evidence=IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046588 "negative regulation of calcium-dependent cell-cell adhesion" evidence=IDA;IMP

GO:0060030 "dorsal convergence" evidence=IMP

GO:0021556 "central nervous system formation" evidence=IMP

GO:0048332 "mesoderm morphogenesis" evidence=IMP

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IMP

RGD|620200 Acvr1 "activin A receptor, type I" [Rattus norvegicus (taxid:10116)]

 Score = 1222 (435.2 bits), Expect = 2.4e-124, P = 2.4e-124
 Identities = 233/419 (55%), Positives = 298/419 (71%)

Query:    10 GQFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIV 69
             GQ  ++CC GD+CN      LP   +  P  +Q +   L++ + IL  V  + + A ++ 
Sbjct:    88 GQ-AVECCQGDWCNRNVTARLPTKGKSFPG-SQNFH--LEVGLIILSVVFAVCLFACILG 143

Query:    70 LFMRRNHRKKLLAARAIQSDPDCFXXXXXXXXXXXXXXSTLREYLDAXXXXXXXXXXXXX 129
             + +R+  R+     R    D +                STL E LD              
Sbjct:   144 VALRKFKRRN--QERLNPRDVE--YGTIEGLITTNVGDSTLAELLDHSCTSGSGSGLPFL 199

Query:   130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
             +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct:   200 VQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 259

Query:   190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
             ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct:   260 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 319

Query:   250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             H EIFGTQGK AIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct:   320 HIEIFGTQGKSAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 379

Query:   310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
             RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct:   380 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 439

Query:   370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct:   440 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 498

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA;ISO

GO:0001569 "patterning of blood vessels" evidence=IEA;ISO

GO:0001655 "urogenital system development" evidence=IMP

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001702 "gastrulation with mouth forming second" evidence=IEA;ISO

GO:0001707 "mesoderm formation" evidence=IEA;ISO

GO:0001755 "neural crest cell migration" evidence=IEA;ISO

GO:0002526 "acute inflammatory response" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA;ISO

GO:0003183 "mitral valve morphogenesis" evidence=IEA;ISO

GO:0003289 "atrial septum primum morphogenesis" evidence=IEA;ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=TAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=IMP

GO:0005024 "transforming growth factor beta-activated receptor activity" evidence=IEA

GO:0005025 "transforming growth factor beta receptor activity, type I" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO;IMP;TAS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO;IMP

GO:0007281 "germ cell development" evidence=IEA;ISO

GO:0007368 "determination of left/right symmetry" evidence=IEA;ISO

GO:0007369 "gastrulation" evidence=ISO

GO:0007498 "mesoderm development" evidence=ISO

GO:0007507 "heart development" evidence=ISO

GO:0009790 "embryo development" evidence=ISO

GO:0009968 "negative regulation of signal transduction" evidence=ISO

GO:0010862 "positive regulation of pathway-restricted SMAD protein phosphorylation" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA

GO:0016361 "activin receptor activity, type I" evidence=ISO;IMP;IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0019838 "growth factor binding" evidence=ISO

GO:0023014 "signal transduction by phosphorylation" evidence=IMP

GO:0030278 "regulation of ossification" evidence=ISO

GO:0030501 "positive regulation of bone mineralization" evidence=IEA;ISO

GO:0030509 "BMP signaling pathway" evidence=IEA;ISO

GO:0032924 "activin receptor signaling pathway" evidence=ISO

GO:0032926 "negative regulation of activin receptor signaling pathway" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0043066 "negative regulation of apoptotic process" evidence=IEA;ISO

GO:0045177 "apical part of cell" evidence=IEA;ISO

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0046332 "SMAD binding" evidence=ISO;IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048179 "activin receptor complex" evidence=ISO;IDA

GO:0048185 "activin binding" evidence=IEA;ISO

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEP

GO:0050431 "transforming growth factor beta binding" evidence=IEA;ISO

GO:0051145 "smooth muscle cell differentiation" evidence=IEA;ISO

GO:0060037 "pharyngeal system development" evidence=IEA;ISO

GO:0060389 "pathway-restricted SMAD protein phosphorylation" evidence=IEA;ISO

GO:0060923 "cardiac muscle cell fate commitment" evidence=IEA;ISO

GO:0061445 "endocardial cushion cell fate commitment" evidence=IEA;ISO

GO:0071385 "cellular response to glucocorticoid stimulus" evidence=IEP

GO:2000017 "positive regulation of determination of dorsal identity" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5CD18	TGFR1_PIG	2, ., 7, ., 1, 1, ., 3, 0	0.5275	0.9119	0.8031	no	N/A
P70539	ACV1C_RAT	2, ., 7, ., 1, 1, ., 3, 0	0.5152	0.9277	0.8336	no	N/A
Q09488	SMA6_CAEEL	2, ., 7, ., 1, 1, ., 3, 0	0.3353	0.8939	0.6226	yes	N/A
Q28041	ACVR1_BOVIN	2, ., 7, ., 1, 1, ., 3, 0	0.5899	0.9164	0.7976	yes	N/A
Q61288	ACVL1_MOUSE	2, ., 7, ., 1, 1, ., 3, 0	0.5721	0.9142	0.8067	no	N/A
Q05438	BMR1B_CHICK	2, ., 7, ., 1, 1, ., 3, 0	0.5322	0.9074	0.8007	no	N/A
Q8K348	ACV1C_MOUSE	2, ., 7, ., 1, 1, ., 3, 0	0.5152	0.9277	0.8336	no	N/A
P37172	ACVR1_MOUSE	2, ., 7, ., 1, 1, ., 3, 0	0.5899	0.9164	0.7976	yes	N/A
P80204	TGFR1_RAT	2, ., 7, ., 1, 1, ., 3, 0	0.5289	0.9051	0.8003	no	N/A
Q61271	ACV1B_MOUSE	2, ., 7, ., 1, 1, ., 3, 0	0.5143	0.9209	0.8079	no	N/A
P80201	ACVR1_RAT	2, ., 7, ., 1, 1, ., 3, 0	0.5875	0.9164	0.7976	yes	N/A
P80202	ACV1B_RAT	2, ., 7, ., 1, 1, ., 3, 0	0.5191	0.9209	0.8079	no	N/A
P80203	ACVL1_RAT	2, ., 7, ., 1, 1, ., 3, 0	0.5721	0.9142	0.8035	no	N/A
Q90ZK6	ACVR1_CHICK	2, ., 7, ., 1, 1, ., 3, 0	0.6052	0.9209	0.8095	yes	N/A
Q04771	ACVR1_HUMAN	2, ., 7, ., 1, 1, ., 3, 0	0.5899	0.9164	0.7976	yes	N/A
Q64729	TGFR1_MOUSE	2, ., 7, ., 1, 1, ., 3, 0	0.5275	0.9119	0.8031	no	N/A
Q8NER5	ACV1C_HUMAN	2, ., 7, ., 1, 1, ., 3, 0	0.5186	0.9209	0.8275	no	N/A
P36896	ACV1B_HUMAN	2, ., 7, ., 1, 1, ., 3, 0	0.5167	0.9209	0.8079	no	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11.30	0.914
3rd Layer	2.7.11	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	443
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-57
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-44
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-37
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-35
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-34
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-34
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-32
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-32
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-31
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-31
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-30
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-28
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-26
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-25
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-24
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	4e-23
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-23
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-22
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-22
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-21
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-20
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-20
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-20
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-20
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	7e-20
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-19
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-19
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-19
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-18
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-18
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-18
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-18
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-17
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-17
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-17
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-17
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-17
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-16
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-16
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-16
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-16
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-16
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-16
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-16
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-16
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-15
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-15
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-15
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-15
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-15
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-15
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-15
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-14
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-14
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-14
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	7e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-13
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-13
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-13
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-13
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-13
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	7e-13
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	9e-13
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-12
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-12
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-12
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-12
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-12
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-12
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-12
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-12
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-12
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-12
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	7e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	7e-12
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	9e-12
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-11
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-11
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-11
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-11
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-11
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	5e-11
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-11
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-10
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-10
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-10
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-10
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-10
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-10
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-10
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-10
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	5e-10
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-10
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-10
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-09
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-09
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-09
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-09
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-09
pfam08515	29	pfam08515, TGF_beta_GS, Transforming growth factor	3e-09
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-09
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-09
smart00467	30	smart00467, GS, GS motif	4e-09
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-09
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-09
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	6e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	9e-09
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	9e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-08
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-08
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-08
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-08
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-08
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-08
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-08
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-08
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-08
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-08
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-08
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	5e-08
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-08
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	9e-08
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-07
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-07
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-07
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-07
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-07
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-07
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-07
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-07
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-07
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	6e-07
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	7e-07
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-07
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	9e-07
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-06
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-06
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-06
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	9e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	9e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	1e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-05
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	2e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-05
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	1e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	2e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	2e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	5e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	7e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	9e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.001
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.001
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.001
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.002
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.002
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.002
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.003
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.004
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.004
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  187 bits (478), Expect = 9e-57
 Identities = 82/292 (28%), Positives = 131/292 (44%), Gaps = 42/292 (14%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRET---EIYSTVLLRHENI 192
             L   +G G +G V++    G    VAVKI   R E S   +T   EI     L H NI
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
           +  I +     +    L+LV  Y   G L+D+L+R   L+  +  KI L I+ GL +LH+
Sbjct: 61  VRLIDAFEDKDH----LYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHS 116

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     I HRD+K +NIL+  NG   IADFGLA    + S+ +       VGT  Y
Sbjct: 117 N--------GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSL----TTFVGTPWY 164

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+L     +       K D+++LG++L+E+             K P+        + 
Sbjct: 165 MAPEVL-----LGGNGYGPKVDVWSLGVILYELLTG----------KPPF-----SGENI 204

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
            D  ++I      P+  +     S       ++K+C +++ + R +A  + +
Sbjct: 205 LDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  152 bits (386), Expect = 8e-44
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 28/207 (13%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           +G+G +G V+          VA+KI    D +S   E   EI     L H NI+   G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
               +    L+LV  Y   GSL D L  N   L+  ++++I L I+ GL +LH+      
Sbjct: 61  EDENH----LYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN----- 111

Query: 258 GKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
               I HRD+K +NIL+   NG   +ADFGL+   +   + +       VGT  YM+PE+
Sbjct: 112 ---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL----KTIVGTPAYMAPEV 164

Query: 317 LDESINMDCFESFKKADIYALGLVLWE 343
           L            +K+DI++LG++L+E
Sbjct: 165 LLGKGYYS-----EKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  134 bits (341), Expect = 8e-37
 Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 52/290 (17%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKI----FFSRDEASWSRETEIYSTVLLRHENILGY 195
           E +G+G +G+V+       G+ VA+K+       +D     RE +I     L+H NI+  
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKK--LKHPNIVRL 62

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                        L+LV  Y   G L+D L  R  L+  +       I++ L +LH+   
Sbjct: 63  YDVFEDEDK----LYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHS--- 115

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
             +G   I HRD+K +NIL+  +G   +ADFGLA    QL     +     VGT  YM+P
Sbjct: 116 --KG---IVHRDLKPENILLDEDGHVKLADFGLA---RQLDPGEKL--TTFVGTPEYMAP 165

Query: 315 EILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           E+L         + + K  DI++LG++L+E+             K P+      D    +
Sbjct: 166 EVLLG-------KGYGKAVDIWSLGVILYELLTG----------KPPFPG----DDQLLE 204

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
           + K I   +     P   +S    + + K       ++   RL+A    +
Sbjct: 205 LFKKIGKPKPPFPPPEWDISPEAKDLIRK----LLVKDPEKRLTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  129 bits (327), Expect = 9e-35
 Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 70/300 (23%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN------VAVKIFF----SRDEASWSRETEIYSTVLL 187
           + L + +G+G +GEV++G   G+       VAVK         +   +  E  I     L
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKK--L 58

Query: 188 RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSI 242
            H NI+  +G        CTQ   L++VT Y   G L D L  +   L    ++++ L I
Sbjct: 59  SHPNIVRLLGV-------CTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQI 111

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VSYSQLSNK 297
             G+ +L +       K  + HRD+ ++N LV  N    I+DFGL+       Y +    
Sbjct: 112 AKGMEYLES-------KNFV-HRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGG 163

Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY 357
             +P        ++M+PE L +      F S  K+D+++ G++LWE         IF   
Sbjct: 164 GKLPI-------KWMAPESLKDGK----FTS--KSDVWSFGVLLWE---------IFTLG 201

Query: 358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
           + PY  +   +     + +++  D  R   P     ++  + + ++M +CW  +   R +
Sbjct: 202 EQPYPGMSNEE-----VLELL-EDGYRLPRP-----ENCPDELYELMLQCWAYDPEDRPT 250

Length = 258

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  127 bits (321), Expect = 6e-34
 Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 43/239 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL---RHE 190
           +   + E +G+G YG V++ +    G+ VA+K     +E       EI    +L      
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIK-VVPVEEDLQEIIKEI---SILKQCDSP 58

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVH 248
            I+ Y GS   +    T LW+V  Y   GS+ D +  T  TL   ++  I    + GL +
Sbjct: 59  YIVKYYGSYFKN----TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEY 114

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH             HRDIK+ NIL+   G   +ADFG++    QL++ M    N  +GT
Sbjct: 115 LH--------SNKKIHRDIKAGNILLNEEGQAKLADFGVS---GQLTDTMA-KRNTVIGT 162

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
             +M+PE++ E I  +      KADI++LG+   E+           E K PY D+ PM
Sbjct: 163 PFWMAPEVIQE-IGYNN-----KADIWSLGITAIEMA----------EGKPPYSDIHPM 205

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  126 bits (320), Expect = 8e-34
 Identities = 79/234 (33%), Positives = 116/234 (49%), Gaps = 44/234 (18%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILGY 195
           E IGKG +GEV++   H   G+ VA+K+        +     E +I      +H NI+ Y
Sbjct: 6   EKIGKGGFGEVYK-ARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKK--CKHPNIVKY 62

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEI 253
            GS +       +LW+V  + S GSL D L  T  TL   Q+  +C  ++ GL +LH+  
Sbjct: 63  YGSYLKK----DELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN- 117

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRDIK+ NIL+ ++G   + DFGL+    QLS+      N  VGT  +M+
Sbjct: 118 -------GIIHRDIKAANILLTSDGEVKLIDFGLSA---QLSDTK--ARNTMVGTPYWMA 165

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           PE+++     D      KADI++LG+   E+     A G     K PY +L PM
Sbjct: 166 PEVING-KPYDY-----KADIWSLGITAIEL-----AEG-----KPPYSELPPM 203

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  122 bits (309), Expect = 3e-32
 Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 47/290 (16%)

Query: 137 QISLSECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWS----RETEIYSTVLLRH 189
           + +  E +G+G +G V+  +    GE +AVK +  S D         RE  I S+  L+H
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS--LQH 58

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
            NI+ Y GS+     +   L +   Y S GSL   L +   L    + K    I+ GL +
Sbjct: 59  PNIVRYYGSERDEEKNT--LNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAY 116

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH+      G   I HRDIK  NILV ++G   +ADFG A        +         GT
Sbjct: 117 LHS-----NG---IVHRDIKGANILVDSDGVVKLADFGCAKRLG--DIETGEGTGSVRGT 166

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             +M+PE++         E  + ADI++LG  + E+     A G     K P+ +L    
Sbjct: 167 PYWMAPEVIRGE------EYGRAADIWSLGCTVIEM-----ATG-----KPPWSEL---G 207

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
                + K+     + P +P   +S+   + + K    C  ++   R +A
Sbjct: 208 NPMAALYKIGSSG-EPPEIPE-HLSEEAKDFLRK----CLRRDPKKRPTA 251

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  121 bits (307), Expect = 7e-32
 Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 81/303 (26%)

Query: 142 ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWS------RETEIYSTVLLRHE 190
           + +G+G +GEV++G   G++     VAVK    +++AS        +E  +     L H 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKT--LKEDASEEERKDFLKEARVMKK--LGHP 56

Query: 191 NILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----------NRTTLNHHQMMK 237
           N++  +G        CT+   L+LV  Y   G L D+L           ++TL+   ++ 
Sbjct: 57  NVVRLLGV-------CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
             + I  G+ +L              HRD+ ++N LV  +    I+DFGL+         
Sbjct: 110 FAIQIAKGMEYLA--------SKKFVHRDLAARNCLVGEDLVVKISDFGLSR-------D 154

Query: 298 MDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
           +      R  T      R+M+PE L + I    F S  K+D+++ G++LWE+       G
Sbjct: 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGI----FTS--KSDVWSFGVLLWEIF----TLG 204

Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
                  PY  L     S +++ + +     R   P  +  D     + ++M  CW  + 
Sbjct: 205 -----ATPYPGL-----SNEEVLEYL-RKGYRLPKP-EYCPD----ELYELMLSCWQLDP 248

Query: 413 NVR 415
             R
Sbjct: 249 EDR 251

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  121 bits (305), Expect = 1e-31
 Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 77/311 (24%)

Query: 138 ISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEAS------WSRETEIYSTV 185
           ++L + +G+G +GEV++G            VAVK    +++AS      + RE  I    
Sbjct: 1   LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKT--LKEDASEQQIEEFLREARIMRK- 57

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
            L H N++  +G        CT+   L++V  Y   G L  +L  NR  L+   ++   L
Sbjct: 58  -LDHPNVVKLLGV-------CTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFAL 109

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQL 294
            I  G+ +L +       K  I HRD+ ++N LV  N    I+DFGL+        Y + 
Sbjct: 110 QIARGMEYLES-------KNFI-HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKR 161

Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
             K+ I         R+M+PE L E      F S  K+D+++ G++LWE         IF
Sbjct: 162 GGKLPI---------RWMAPESLKEGK----FTS--KSDVWSFGVLLWE---------IF 197

Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
              + PY  +       +++ + +   +    LP      +    +  +M +CW ++   
Sbjct: 198 TLGEQPYPGMSN-----EEVLEYL---KNGYRLPQ---PPNCPPELYDLMLQCWAEDPED 246

Query: 415 RLSALRVKKTL 425
           R +   + + L
Sbjct: 247 RPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  118 bits (299), Expect = 8e-31
 Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 59/300 (19%)

Query: 137 QISLSECIGKGRYGEVWRGV-WH-GENVAVK-----IFFSRDEASWSRETEIYSTVLLRH 189
              L + IG+G +G V++G+    G+ VA+K             S  +E ++     L+H
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKN--LKH 58

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
            NI+ YIGS  TS      L+++  Y   GSL   + +        +      ++ GL +
Sbjct: 59  PNIVKYIGSIETS----DSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAY 114

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH      QG   + HRDIK+ NIL   +G   +ADFG+A       N +       VGT
Sbjct: 115 LHE-----QG---VIHRDIKAANILTTKDGVVKLADFGVATK----LNDVSKDDASVVGT 162

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             +M+PE+    I M    +   +DI++LG  + E+   T           PY+DL PM 
Sbjct: 163 PYWMAPEV----IEMS--GASTASDIWSLGCTVIELL--TG--------NPPYYDLNPMA 206

Query: 369 PSFDDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK 427
             F        I Q   P LP   +S      +   + +C+ ++ N+R +A    K L+K
Sbjct: 207 ALF-------RIVQDDHPPLPEG-ISP----ELKDFLMQCFQKDPNLRPTA----KQLLK 250

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  116 bits (292), Expect = 9e-30
 Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 78/312 (25%)

Query: 138 ISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEASWS------RETEIYSTV 185
           ++L + +G+G +GEV++G            VAVK    +++AS        RE  I    
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKT--LKEDASEQQIEEFLREARIMRK- 57

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKIC 239
            L H NI+  +G        CT+   L +V  Y   G L D+L       L+   ++   
Sbjct: 58  -LDHPNIVKLLGV-------CTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFA 109

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQ 293
           L I  G+ +L +       K  I HRD+ ++N LV  N    I+DFGL+        Y  
Sbjct: 110 LQIARGMEYLES-------KNFI-HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKV 161

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI 353
              K+ I         R+M+PE L E      F S  K+D+++ G++LWE         I
Sbjct: 162 KGGKLPI---------RWMAPESLKEGK----FTS--KSDVWSFGVLLWE---------I 197

Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
           F   + PY  +        ++ + +   ++   LP      +    + K+M +CW ++  
Sbjct: 198 FTLGEEPYPGMSN-----AEVLEYL---KKGYRLPKP---PNCPPELYKLMLQCWAEDPE 246

Query: 414 VRLSALRVKKTL 425
            R +   + + L
Sbjct: 247 DRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  112 bits (281), Expect = 2e-28
 Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 60/299 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSR----ETEIYSTVLLRHEN 191
           K++ L   IGKG +G+V  G + G+ VAVK    +D+++ ++    E  + +T  LRH N
Sbjct: 6   KELKLGATIGKGEFGDVMLGDYRGQKVAVKC--LKDDSTAAQAFLAEASVMTT--LRHPN 61

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVH 248
           ++  +G  +        L++VT Y + GSL D+L    R  +   Q +   L +  G+ +
Sbjct: 62  LVQLLGVVLQGNP----LYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEY 117

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRV 306
           L  + F         HRD+ ++N+LV  +    ++DFGLA   S  Q S K+ +      
Sbjct: 118 LEEKNF--------VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV------ 163

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              ++ +PE L E      F +  K+D+++ G++LWE         I+   + PY    P
Sbjct: 164 ---KWTAPEALREKK----FST--KSDVWSFGILLWE---------IYSFGRVPY----P 201

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
             P  D +  V      R   P     +     + KVMK+CW  +   R +  ++++ L
Sbjct: 202 RIPLKDVVPHV--EKGYRMEAP-----EGCPPEVYKVMKDCWELDPAKRPTFKQLREQL 253

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  107 bits (269), Expect = 3e-26
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 32/209 (15%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK--IFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           IG+G  GEV++      G+ VA+K      +++     E  I      +H NI+ Y  S 
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKD--CKHPNIVDYYDSY 84

Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +        LW+V  Y   GSL D +  N   +N  Q+  +C  ++ GL +LH+     Q
Sbjct: 85  LV--GDE--LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS-----Q 135

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-I 316
               + HRDIKS NIL+  +G+  +ADFG A    QL+ +     N  VGT  +M+PE I
Sbjct: 136 N---VIHRDIKSDNILLSKDGSVKLADFGFAA---QLTKEKS-KRNSVVGTPYWMAPEVI 188

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVC 345
             +           K DI++LG++  E+ 
Sbjct: 189 KRKDYGP-------KVDIWSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  104 bits (262), Expect = 2e-25
 Identities = 89/302 (29%), Positives = 134/302 (44%), Gaps = 62/302 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRET---EIYSTVLLRHE 190
           +  +L ECIGKG +GEV++ +    N  VA+K+    +EA    E    EI      R  
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVI-DLEEAEDEIEDIQQEIQFLSQCRSP 59

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
            I  Y GS +      ++LW++  Y   GS  D L    L+   +  I   ++ GL +LH
Sbjct: 60  YITKYYGSFLKG----SKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLH 115

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                 +GK    HRDIK+ NIL+   G   +ADFG++   +   +K     N  VGT  
Sbjct: 116 E-----EGK---IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR----NTFVGTPF 163

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           +M+PE++ +S   D     +KADI++LG+   E+     A G     + P  DL P    
Sbjct: 164 WMAPEVIKQS-GYD-----EKADIWSLGITAIEL-----AKG-----EPPLSDLHP---- 203

Query: 371 FDDMRKVICIDQQR-PVLPNRWVSDSTLNAMTKVMKE----CWHQNANVRLSALRVKKTL 425
              MR +  I +   P L     S           K+    C +++   R SA    K L
Sbjct: 204 ---MRVLFLIPKNNPPSLEGNKFSKP--------FKDFVSLCLNKDPKERPSA----KEL 248

Query: 426 IK 427
           +K
Sbjct: 249 LK 250

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  100 bits (251), Expect = 4e-24
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 38/217 (17%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKI----FFSRDEASWS-RETEIYSTVLLRHENILG 194
           + IGKG +G+V+  R    G+   +K       S  E   +  E +I     L H NI+ 
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK--LNHPNIIK 63

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-----HQMMKICLSIVNGLVHL 249
           Y  S       C    +V  Y   G L   + +           Q++   + +   L +L
Sbjct: 64  YYESFEEKGKLC----IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          I HRDIK +NI + +NG   + DFG++     LS+ +D+     VGT 
Sbjct: 120 HSR--------KILHRDIKPQNIFLTSNGLVKLGDFGIS---KVLSSTVDL-AKTVVGTP 167

Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            Y+SPE+  ++  N        K+DI++LG VL+E+C
Sbjct: 168 YYLSPELCQNKPYN-------YKSDIWSLGCVLYELC 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 97.4 bits (242), Expect = 4e-23
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 52/295 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 6   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 64

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 65  LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN 121

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 122 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-------VKWT 166

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD--PS 370
           +PE L E      F +  K+D+++ G++LWE         I+   + PY  +   D  P 
Sbjct: 167 APEALREKK----FST--KSDVWSFGILLWE---------IYSFGRVPYPRIPLKDVVPR 211

Query: 371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
            +   K+   D   PV+ +             VMK+CWH +A  R S L++++ L
Sbjct: 212 VEKGYKMDAPDGCPPVVYD-------------VMKQCWHLDAATRPSFLQLREQL 253

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 45/245 (18%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTV-LLR----HE 190
            L E IG+G YG+V++   H   G+ VA+KI     +     E EI     +LR    H 
Sbjct: 9   ELVEVIGEGTYGKVYKAR-HKKTGQLVAIKIM----DIIEDEEEEIKEEYNILRKYSNHP 63

Query: 191 NILGYIGSDMTSRNSCT--QLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------ICLSI 242
           NI  + G+ +         QLWLV      GS+ D L +      + +K      I    
Sbjct: 64  NIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTD-LVKGLRKKGKRLKEEWIAYILRET 122

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
           + GL +LH        +  + HRDIK +NIL+  N    + DFG++   +QL + +    
Sbjct: 123 LRGLAYLH--------ENKVIHRDIKGQNILLTKNAEVKLVDFGVS---AQLDSTLG-RR 170

Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
           N  +GT  +M+PE++      D      ++D+++LG+   E+     A+G     K P  
Sbjct: 171 NTFIGTPYWMAPEVIACDEQPDASYDA-RSDVWSLGITAIEL-----ADG-----KPPLC 219

Query: 363 DLVPM 367
           D+ PM
Sbjct: 220 DMHPM 224

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 96.2 bits (240), Expect = 1e-22
 Identities = 80/286 (27%), Positives = 123/286 (43%), Gaps = 53/286 (18%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-FSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           IG G YG+V+  R +  GE VA+K+      +     + EI      RH NI+ Y GS +
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 201 TSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
             R    +LW+V  Y   GSL D   + R  L+  Q+  +C   + GL +LH       G
Sbjct: 71  --RRD--KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE-----TG 121

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
           K    HRDIK  NIL+  +G   +ADFG++   +QL+  +       +GT  +M+PE+  
Sbjct: 122 K---IHRDIKGANILLTEDGDVKLADFGVS---AQLTATIA-KRKSFIGTPYWMAPEVAA 174

Query: 319 ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI 378
                       K DI+ALG+   E+           E + P  DL PM        + +
Sbjct: 175 VERKGGYDG---KCDIWALGITAIELA----------ELQPPMFDLHPM--------RAL 213

Query: 379 CI----DQQRPVL--PNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            +    +   P L    +W            +K+C  ++   R +A
Sbjct: 214 FLISKSNFPPPKLKDKEKWSPV-----FHDFIKKCLTKDPKKRPTA 254

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 96.3 bits (238), Expect = 7e-22
 Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 30/217 (13%)

Query: 140 LSECIGKGRYGEVWRGVWHGENVAVKIF------FSRDEASWSRETEIYSTVLLRHENIL 193
           +   +G+G +GEV+      + VA+K+        S++   + RE +I ++ L    NI+
Sbjct: 4   ILRKLGEGSFGEVYLAR-DRKLVALKVLAKKLESKSKEVERFLREIQILAS-LNHPPNIV 61

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHL 249
                          L+LV  Y   GSL D L     +  L+  + + I   I++ L +L
Sbjct: 62  KLYDFFQDEG----SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CVIADFGLAVSY--SQLSNKMDIPPNPRV 306
           H++         I HRDIK +NIL+  +G    + DFGLA        ++ +   P+  V
Sbjct: 118 HSK--------GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSV 169

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  YM+PE+L   + +    +   +DI++LG+ L+E
Sbjct: 170 GTPGYMAPEVL---LGLSLAYASSSSDIWSLGITLYE 203

Length = 384

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 92.0 bits (229), Expect = 4e-21
 Identities = 72/247 (29%), Positives = 105/247 (42%), Gaps = 49/247 (19%)

Query: 136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIF------FSRDEASWSRETEIYSTVLL 187
               L E IG G    V+  +   + E VA+K         S DE    +E +  S    
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELR--KEVQAMSQ--C 56

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICL-SIV 243
            H N++ Y  S +       +LWLV  Y S GSL D              ++   L  ++
Sbjct: 57  NHPNVVKYYTSFVVGD----ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL 112

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
            GL +LH             HRDIK+ NIL+  +G+  IADFG++ S   L++  D    
Sbjct: 113 KGLEYLH--------SNGQIHRDIKAGNILLGEDGSVKIADFGVSAS---LADGGDRTRK 161

Query: 304 PR---VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
            R   VGT  +M+PE++++    D      KADI++ G+   E+     A G      AP
Sbjct: 162 VRKTFVGTPCWMAPEVMEQVHGYD-----FKADIWSFGITAIEL-----ATG-----AAP 206

Query: 361 YHDLVPM 367
           Y    PM
Sbjct: 207 YSKYPPM 213

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 90.5 bits (224), Expect = 2e-20
 Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)

Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 10  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E     
Sbjct: 70  SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 120

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+  +G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 121 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 173

Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
            +S     ++S  KADI++LG+   E+ +           + P+ +L PM   F
Sbjct: 174 KQS----AYDS--KADIWSLGITAIELAKG----------EPPHSELHPMKVLF 211

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 90.2 bits (224), Expect = 2e-20
 Identities = 86/298 (28%), Positives = 132/298 (44%), Gaps = 64/298 (21%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIFF----SRDEASWSRETEIYSTVLLRH---ENI 192
           E IG+G YG V+RG  V  G  VA+KI        D +   RE  + S   LR     NI
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQ--LRQSQPPNI 64

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIV-----NGLV 247
             Y GS +       +LW++  Y   GS+     RT +    + +  +S++       L 
Sbjct: 65  TKYYGSYLKG----PRLWIIMEYAEGGSV-----RTLMKAGPIAEKYISVIIREVLVALK 115

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           ++H        K  + HRDIK+ NILV   G   + DFG+A   +Q S+K     +  VG
Sbjct: 116 YIH--------KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR----STFVG 163

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           T  +M+PE++ E    D      KADI++LG+ ++E+     A G       PY D+   
Sbjct: 164 TPYWMAPEVITEGKYYD-----TKADIWSLGITIYEM-----ATG-----NPPYSDV--- 205

Query: 368 DPSFDDMRKVICI-DQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
               D  R ++ I   + P L +   S      + + +  C  +    RLSA  + K+
Sbjct: 206 ----DAFRAMMLIPKSKPPRLEDNGYSKL----LREFVAACLDEEPKERLSAEELLKS 255

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 84/282 (29%), Positives = 123/282 (43%), Gaps = 45/282 (15%)

Query: 143 CIGKGRYGEVWRGV--WHGENVAVK-IFFSRDEASWSR-ETEIYSTVLLRHENILGYIGS 198
            +G+G  G V++      G+  A+K I    DE    +   E+ +        ++   G+
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
                    ++ +V  Y   GSL D L +   +    +  I   I+ GL +LHT      
Sbjct: 68  FYKEG----EISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT------ 117

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
            K  I HRDIK  N+L+ + G   IADFG++     L N +D   N  VGT  YMSPE +
Sbjct: 118 -KRHIIHRDIKPSNLLINSKGEVKIADFGIS---KVLENTLD-QCNTFVGTVTYMSPERI 172

Query: 318 D-ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
             ES +         ADI++LGL L E C    A G F     P+  L P  PSF ++ +
Sbjct: 173 QGESYSYA-------ADIWSLGLTLLE-C----ALGKF-----PF--LPPGQPSFFELMQ 213

Query: 377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            IC D   P LP    S    + ++     C  ++   R SA
Sbjct: 214 AIC-DGPPPSLPAEEFSPEFRDFISA----CLQKDPKKRPSA 250

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 89.3 bits (222), Expect = 4e-20
 Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 50/257 (19%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWS---RETEIYSTVLLRHENILGYIG 197
           +G G  G V        G+ +AVK I    +EA      RE +I          I+G+ G
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC--NSPYIVGFYG 66

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           +   +      + +   Y   GSL   L      +    + KI ++++ GL +LH     
Sbjct: 67  AFYNN----GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE---- 118

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
              K  I HRD+K  NILV + G   + DFG  VS  QL N +       VGT  YM+PE
Sbjct: 119 ---KHKIIHRDVKPSNILVNSRGQIKLCDFG--VS-GQLVNSL---AKTFVGTSSYMAPE 169

Query: 316 ILDE---SINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
            +     S+         K+DI++LGL L E+     A G    +  P  +  P    F+
Sbjct: 170 RIQGNDYSV---------KSDIWSLGLSLIEL-----ATG---RFPYPPENDPPDGI-FE 211

Query: 373 DMRKVICIDQQRPVLPN 389
            ++ +  +++  P LP+
Sbjct: 212 LLQYI--VNEPPPRLPS 226

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 89.0 bits (220), Expect = 7e-20
 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 36/230 (15%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +   E VA+KI    +      + +   TVL + ++  I  Y G
Sbjct: 10  ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYG 69

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L    +  I   I+ GL +LH+E     
Sbjct: 70  SYLKG----TKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE----- 120

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+   G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 121 ---RKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 173

Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
            +S        F KADI++LG+   E+     A G     + P  DL PM
Sbjct: 174 KQSA-----YDF-KADIWSLGITAIEL-----AKG-----EPPNSDLHPM 207

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 87.5 bits (217), Expect = 1e-19
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 41/221 (18%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFF--SRDEASWSRETEIYSTVLLRHENI 192
             I L   +G G++GEVW G+W+    VAVK     + D   +  E +I     LRH  +
Sbjct: 6   TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKK--LRHPKL 63

Query: 193 LGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGL 246
           +            CT    +++VT    +GSL ++L       L   Q++ +   + +G+
Sbjct: 64  IQLYAV-------CTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            +L  + +         HRD+ ++N+LV  N  C +ADFGLA        K DI    R 
Sbjct: 117 AYLEAQNY--------IHRDLAARNVLVGENNICKVADFGLARVI-----KEDI-YEARE 162

Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           G K   ++ +P    E+   + F    K+D+++ G++L E+
Sbjct: 163 GAKFPIKWTAP----EAALYNRFSI--KSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 87.5 bits (216), Expect = 2e-19
 Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 39/252 (15%)

Query: 132 RTLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           R  A    L E +G G YG+V++G  V  G+  A+K+     + +   E EI   + +  
Sbjct: 2   RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLK 57

Query: 188 ---RHENILGYIGSDMTSRNSCT--QLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKIC 239
               H NI  Y G+ +         QLWLV  +   GS+ D +  T   TL    +  IC
Sbjct: 58  KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 117

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             I+ GL HLH           + HRDIK +N+L+  N    + DFG++    +   +  
Sbjct: 118 REILRGLSHLHQH--------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR- 168

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
              N  +GT  +M+PE++    N D    F K+D+++LG+   E+           E   
Sbjct: 169 ---NTFIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEMA----------EGAP 214

Query: 360 PYHDLVPMDPSF 371
           P  D+ PM   F
Sbjct: 215 PLCDMHPMRALF 226

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 86.7 bits (215), Expect = 4e-19
 Identities = 75/316 (23%), Positives = 117/316 (37%), Gaps = 81/316 (25%)

Query: 136 KQISLSECIGKGRYGEVWRGVW------HGENVAVKIF-------FSRDEASWSRETEIY 182
           + +   + +G+G +G+V    +       GE VAVK            D   + RE EI 
Sbjct: 4   RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSD---FEREIEIL 60

Query: 183 STVLLRHENILGYIG-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
            T  L HENI+ Y G  +     S   L L+  Y   GSL D+L  +R  +N  +++   
Sbjct: 61  RT--LDHENIVKYKGVCEKPGGRS---LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFS 115

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQ 293
             I  G+ +L ++           HRD+ ++NILV++     I+DFGLA        Y  
Sbjct: 116 SQICKGMDYLGSQ--------RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYY 167

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV---CRRTKA 350
           +    + P         + +PE L  S     F S   +D+++ G+ L+E+         
Sbjct: 168 VKEPGESP-------IFWYAPECLRTSK----FSS--ASDVWSFGVTLYELFTYGD---- 210

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPV--LPNRWVSDSTLNAMTK------ 402
                          P    F  +R +     Q  V  L         L           
Sbjct: 211 -----------PSQSPP-AEF--LRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVY 256

Query: 403 -VMKECWHQNANVRLS 417
            +MK CW      R S
Sbjct: 257 DLMKLCWEAEPQDRPS 272

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 85.5 bits (211), Expect = 1e-18
 Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 28/233 (12%)

Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 10  ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L     +  Q+  +   I+ GL +LH+E     
Sbjct: 70  SYLKG----TKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE----- 120

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+   G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 121 ---KKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 173

Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
            +S     ++S  KADI++LG+   E+ +    N      +  +   +P +  
Sbjct: 174 QQS----AYDS--KADIWSLGITAIELAKGEPPNSDMHPMRVLFL--IPKNNP 218

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 84.3 bits (208), Expect = 2e-18
 Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 41/251 (16%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSR-ETEIYSTV 185
           +++R       L + +G G YG+V+  R +  GE  AVKI        +S  + EI+   
Sbjct: 2   ILRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVK 61

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVN 244
             +H NI+ Y GS ++      +LW+   Y   GSL D  + T  L+  Q+  +C   + 
Sbjct: 62  ECKHCNIVAYFGSYLSRE----KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQ 117

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL +LH+     +GK    HRDIK  NIL+  NG   +ADFG+A   +    K       
Sbjct: 118 GLAYLHS-----KGK---MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR----KS 165

Query: 305 RVGTKRYMSPEIL----DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
            +GT  +M+PE+     +   N  C       DI+A+G+   E+           E + P
Sbjct: 166 FIGTPYWMAPEVAAVEKNGGYNQLC-------DIWAVGITAIELA----------ELQPP 208

Query: 361 YHDLVPMDPSF 371
             DL PM   F
Sbjct: 209 MFDLHPMRALF 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 83.6 bits (207), Expect = 4e-18
 Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 76/300 (25%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVL 186
           IQR     I+L  CIG+G++G+V++GV+     E +AV +   ++  S S   +      
Sbjct: 3   IQRED---ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAY 59

Query: 187 L----RHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKI 238
           +     H +I+  IG  ++          W+V      G L  +L  N+ +L+   ++  
Sbjct: 60  IMRQFDHPHIVKLIGVITENPV-------WIVMELAPLGELRSYLQVNKYSLDLASLILY 112

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VSYSQ 293
              +   L +L ++ F         HRDI ++N+LV +     + DFGL+      SY +
Sbjct: 113 SYQLSTALAYLESKRF--------VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164

Query: 294 LS-NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKAN 351
            S  K+ I         ++M+P    ESIN   F  F  A D++  G+ +WE        
Sbjct: 165 ASKGKLPI---------KWMAP----ESIN---FRRFTSASDVWMFGVCMWE-------- 200

Query: 352 GIFEEYKAPYHDLVPMDPSFDDMRKVIC-IDQ-QRPVLPNRWVSDSTLNAMTKVMKECWH 409
            I      P+  +            VI  I+  +R  +P      +    +  +M +CW 
Sbjct: 201 -ILMLGVKPFQGV--------KNNDVIGRIENGERLPMP-----PNCPPTLYSLMTKCWA 246

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 83.9 bits (207), Expect = 4e-18
 Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 39/259 (15%)

Query: 125 GLPLLIQRTLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEI- 181
            + L   R  A    L E +G G YG+V++G  V  G+  A+K+    ++     + EI 
Sbjct: 5   DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEIN 64

Query: 182 ----YSTVLLRHENILGYIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNH 232
               YS     H NI  Y G+    +      QLWLV  +   GS+ D +  T    L  
Sbjct: 65  MLKKYS----HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKE 120

Query: 233 HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
             +  IC  I+ GL HLH           + HRDIK +N+L+  N    + DFG++    
Sbjct: 121 DWIAYICREILRGLAHLHAH--------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172

Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
           +   +     N  +GT  +M+PE++    N D    + ++DI++LG+   E+        
Sbjct: 173 RTVGRR----NTFIGTPYWMAPEVIACDENPDATYDY-RSDIWSLGITAIEMA------- 220

Query: 353 IFEEYKAPYHDLVPMDPSF 371
              E   P  D+ PM   F
Sbjct: 221 ---EGAPPLCDMHPMRALF 236

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 41/222 (18%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETE-----IYSTV----LLRH 189
           E IGKG +G V R V     G+           E  +   TE     + S V     L+H
Sbjct: 6   ETIGKGSFGTV-RKVRRKSDGK------ILVWKEIDYGNMTEKEKQQLVSEVNILRELKH 58

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-----HQMMKICLSIVN 244
            NI+ Y    +   N    L++V  Y   G L   + +            + +I   ++ 
Sbjct: 59  PNIVRYYDRIIDRSN--QTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL 116

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
            L   H     +     + HRD+K  NI +  N    + DFGLA    ++          
Sbjct: 117 ALYECH---NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA----KILGHDSSFAKT 169

Query: 305 RVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            VGT  YMSPE L   S +       +K+DI++LG +++E+C
Sbjct: 170 YVGTPYYMSPEQLNHMSYD-------EKSDIWSLGCLIYELC 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 81.5 bits (201), Expect = 2e-17
 Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 58/290 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRE---TEIYSTVLLRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +    E    + L HE 
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMKLSHEK 60

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVH 248
           ++   G     R     +++VT Y S G L ++L R         Q++++C  +  G+ +
Sbjct: 61  LVQLYGVCTKQR----PIYIVTEYMSNGCLLNYL-REHGKRFQPSQLLEMCKDVCEGMAY 115

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L ++ F         HRD+ ++N LV   G   ++DFGL+  Y      +D      VG+
Sbjct: 116 LESKQF--------IHRDLAARNCLVDDQGCVKVSDFGLS-RYV-----LDDEYTSSVGS 161

Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
           K   R+  PE+L  S     F S  K+D++A G+++WEV         +   K PY    
Sbjct: 162 KFPVRWSPPEVLLYSK----FSS--KSDVWAFGVLMWEV---------YSLGKMPYE--- 203

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                F++   V  + Q   +      S+     +  +M  CWH+ A  R
Sbjct: 204 ----RFNNSETVEKVSQGLRLYRPHLASEK----VYAIMYSCWHEKAEER 245

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 80/317 (25%), Positives = 131/317 (41%), Gaps = 90/317 (28%)

Query: 138 ISLSECIGKGRYGEVWRG-VWHGEN------VAVKIF--FSRDEA--SWSRETEIYSTVL 186
           I L   +G+G +G+V+ G  +H E       VAVK     + ++A   + RE E+ +   
Sbjct: 7   IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN-- 64

Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR---------------T 228
            +HENI+ + G        CT+     +V  Y   G L   L                  
Sbjct: 65  FQHENIVKFYGV-------CTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117

Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
            L   Q+++I + I +G+V+L ++ F         HRD+ ++N LV  +    I DFG++
Sbjct: 118 ELTLSQLLQIAVQIASGMVYLASQHF--------VHRDLATRNCLVGYDLVVKIGDFGMS 169

Query: 289 VSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVL 341
                     D+      RVG       R+M P    ESI    F +  ++D+++ G+VL
Sbjct: 170 ---------RDVYTTDYYRVGGHTMLPIRWMPP----ESIMYRKFTT--ESDVWSFGVVL 214

Query: 342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQQRPVLPNRWVSDSTLNAM 400
           WE         IF   K P++ L           +VI CI Q R +   R         +
Sbjct: 215 WE---------IFTYGKQPWYGL--------SNEEVIECITQGRLLQRPRTCPSE----V 253

Query: 401 TKVMKECWHQNANVRLS 417
             +M  CW ++   R++
Sbjct: 254 YDIMLGCWKRDPQQRIN 270

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 80.8 bits (199), Expect = 3e-17
 Identities = 62/230 (26%), Positives = 114/230 (49%), Gaps = 41/230 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILG 194
           ++++L E IG+G +G V +G + G+ VAVK       A ++  ET + +   L H+N++ 
Sbjct: 6   QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTK--LHHKNLVR 63

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHT 251
            +G  + +      L++V    S G+L + L    R  ++  Q+++  L +  G+ +L +
Sbjct: 64  LLGVILHN-----GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES 118

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRD+ ++NILV  +G   ++DFGLA   S   +   +P        ++
Sbjct: 119 K--------KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP-------VKW 163

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
            +PE L        F S  K+D+++ G++LWEV         F   +APY
Sbjct: 164 TAPEALKHKK----FSS--KSDVWSYGVLLWEV---------FSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 80.2 bits (198), Expect = 5e-17
 Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 41/235 (17%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET------EIYSTVLLRHENIL 193
           E +G G +G V+ G+    G+  AVK     D+    +E       EI     L+H NI+
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 194 GYIGSDMTSRNSCTQLWLVTH------YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV 247
            Y+G++    N    L LV           +GS  + + R  L   Q       I+ GL 
Sbjct: 66  QYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIR--LYTRQ-------ILLGLE 116

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +LH             HRDIK  NILV TNG   +ADFG+A    + S           G
Sbjct: 117 YLHDR--------NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF-----KG 163

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
           +  +M+PE++ +            ADI++LG  + E+          E   A + 
Sbjct: 164 SPYWMAPEVIAQQGGYGL-----AADIWSLGCTVLEMATGKPPWSQLEGVAAVFK 213

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 70/297 (23%)

Query: 135 AKQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHE 190
             +++  + +G G++G V  G W G+ +VA+K+     E + S +  I    +   L H 
Sbjct: 3   PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMI---REGAMSEDDFIEEAKVMMKLSHP 59

Query: 191 NILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNG 245
           N++   G        CT+   +++VT Y + G L ++L   +  L    ++ +C  +   
Sbjct: 60  NLVQLYGV-------CTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEA 112

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L +  F         HRD+ ++N LV  +    ++DFGLA  Y      +D      
Sbjct: 113 MEYLESNGF--------IHRDLAARNCLVGEDNVVKVSDFGLA-RYV-----LDDQYTSS 158

Query: 306 VGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
            GTK   ++  PE+ D S     F S  K+D+++ G+++WEV         F E K PY 
Sbjct: 159 QGTKFPVKWAPPEVFDYSR----FSS--KSDVWSFGVLMWEV---------FSEGKMPY- 202

Query: 363 DLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                   F +   V  +       RP L    V          +M  CWH+    R
Sbjct: 203 ------ERFSNSEVVESVSAGYRLYRPKLAPTEVYT--------IMYSCWHEKPEDR 245

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 41/220 (18%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGE-NVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
            + L   +G G++GEVW G W+G   VAVK     +    ++ +E +I     LRH+ ++
Sbjct: 7   SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKK--LRHDKLV 64

Query: 194 GYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLV 247
                       C++   +++VT Y S GSL D L       L   Q++ +   I  G+ 
Sbjct: 65  QLYAV-------CSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMA 117

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L +  +         HRD+ ++NILV  N  C IADFGLA          D     R G
Sbjct: 118 YLESRNY--------IHRDLAARNILVGENLVCKIADFGLARLI------EDDEYTAREG 163

Query: 308 TK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            K   ++ +P    E+ N   F    K+D+++ G++L E+
Sbjct: 164 AKFPIKWTAP----EAANYGRFT--IKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 49/236 (20%)

Query: 159 GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQLWLVTHY 215
           G+ VAVK    R +    RE      V++R   HEN++    S +       +LW+V  +
Sbjct: 47  GKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHENVVDMYNSYLVG----DELWVVMEF 100

Query: 216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK 275
              G+L D +  T +N  Q+  +CLS++  L +LH +         + HRDIKS +IL+ 
Sbjct: 101 LEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ--------GVIHRDIKSDSILLT 152

Query: 276 TNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEILDESINMDCFESFKKADI 334
           ++G   ++DFG     S+     ++P     VGT  +M+PE++             + DI
Sbjct: 153 SDGRIKLSDFGFCAQVSK-----EVPKRKSLVGTPYWMAPEVISR------LPYGTEVDI 201

Query: 335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR 390
           ++LG+++ E+           + + PY +    +P    MR++      R  LP R
Sbjct: 202 WSLGIMVIEMI----------DGEPPYFN----EPPLQAMRRI------RDNLPPR 237

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 29/211 (13%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           IG+G YG V+  R    GE VA+K    R E+    +T   EI     L H NI+  +  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL-- 64

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           D+        L+LV  +       L     +  L    +      ++ GL   H      
Sbjct: 65  DVFRHKG--DLYLVFEFMDTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCH------ 115

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I HRD+K +N+L+ T G   +ADFGLA S+              V T+ Y +PE+
Sbjct: 116 --SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY----THYVVTRWYRAPEL 169

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRR 347
           L     +         DI+++G +  E+  R
Sbjct: 170 L-----LGDKGYSTPVDIWSVGCIFAELLSR 195

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 78.2 bits (193), Expect = 3e-16
 Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 49/220 (22%)

Query: 144 IGKGRYGEVWRGVW--HGEN----VAVKIFFSRDEASWSRETEI----YSTVLLRHENIL 193
           +G G +G V++GVW   GE     VA+K+   R+E S     EI    Y    + H +++
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVL--REETSPKANKEILDEAYVMASVDHPHVV 72

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  ++S     Q+ L+T     G L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 73  RLLGICLSS-----QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE 127

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSYSQLSNKMDIPPNP 304
           +         + HRD+ ++N+LVKT     I DFGLA         Y     K+ I    
Sbjct: 128 K--------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPI---- 175

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                ++M+     ESI    +    K+D+++ G+ +WE+
Sbjct: 176 -----KWMAL----ESILHRIYTH--KSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 77.8 bits (191), Expect = 4e-16
 Identities = 73/251 (29%), Positives = 109/251 (43%), Gaps = 41/251 (16%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-FSRDEASWSRETEIYSTV 185
           L +R   +   L + IG G YG+V+  R V  GE  A+K+      E     + EI    
Sbjct: 2   LSRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMK 61

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVN 244
             +H NI+ Y GS +       +LW+   +   GSL D  + T  L+  Q+  +    + 
Sbjct: 62  DCKHSNIVAYFGSYLRR----DKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQ 117

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL +LH+     +GK    HRDIK  NIL+  NG   +ADFG++   +    K       
Sbjct: 118 GLYYLHS-----KGK---MHRDIKGANILLTDNGHVKLADFGVSAQITATIAKR----KS 165

Query: 305 RVGTKRYMSPEIL----DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
            +GT  +M+PE+         N  C       DI+A+G+   E+           E + P
Sbjct: 166 FIGTPYWMAPEVAAVERKGGYNQLC-------DIWAVGITAIELA----------ELQPP 208

Query: 361 YHDLVPMDPSF 371
             DL PM   F
Sbjct: 209 MFDLHPMRALF 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 77.5 bits (191), Expect = 5e-16
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 35/192 (18%)

Query: 159 GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQLWLVTHY 215
           G  VAVK    R +    RE      V++R   H NI+    S +       +LW+V  +
Sbjct: 44  GRQVAVKKMDLRKQQR--RELLFNEVVIMRDYQHPNIVEMYSSYLVG----DELWVVMEF 97

Query: 216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK 275
              G+L D +  T +N  Q+  +CL+++  L  LH      QG   + HRDIKS +IL+ 
Sbjct: 98  LEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHA-----QG---VIHRDIKSDSILLT 149

Query: 276 TNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSPEILDESINMDCFESFKK 331
           ++G   ++DFG     +Q+S ++     PR    VGT  +M+PE+    I+   + +  +
Sbjct: 150 SDGRVKLSDFGFC---AQVSKEV-----PRRKSLVGTPYWMAPEV----ISRLPYGT--E 195

Query: 332 ADIYALGLVLWE 343
            DI++LG+++ E
Sbjct: 196 VDIWSLGIMVIE 207

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 77.2 bits (190), Expect = 7e-16
 Identities = 75/293 (25%), Positives = 114/293 (38%), Gaps = 56/293 (19%)

Query: 140 LSECIGKGRYGEVW--RGVWHGENVAVKIF-FSRDEASWSRET-----EIYSTVLLRHEN 191
             + +G+G +G V+    V  G  +AVK   F  D     +E      EI     L+HE 
Sbjct: 6   RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHER 65

Query: 192 ILGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           I+ Y G        C +    L +   Y   GS+ D L     L      K    I+ G+
Sbjct: 66  IVQYYG--------CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGV 117

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            +LH+ +        I HRDIK  NIL  + G   + DFG +     + +          
Sbjct: 118 EYLHSNM--------IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG-TGMKSVT 168

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           GT  +MSPE+    I+ + +   +KAD++++G  + E+             K P+ +   
Sbjct: 169 GTPYWMSPEV----ISGEGYG--RKADVWSVGCTVVEMLTE----------KPPWAEFEA 212

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           M   F      I      P LP+  VS    N + +   E    NA  R SA 
Sbjct: 213 MAAIFK-----IATQPTNPQLPSH-VSPDARNFLRRTFVE----NAKKRPSAE 255

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 31/207 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V   R    G  VAVK+   R +    RE      V++R   H+N++    S
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHQNVVEMYKS 86

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW++  +   G+L D +++T LN  Q+  +C S++  L +LH++      
Sbjct: 87  YLVGE----ELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ------ 136

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
              + HRDIKS +IL+  +G   ++DFG     S+     D+P     VGT  +M+PE++
Sbjct: 137 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-----DVPKRKSLVGTPYWMAPEVI 189

Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
             +          + DI++LG+++ E+
Sbjct: 190 SRTPYG------TEVDIWSLGIMVIEM 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 76.1 bits (187), Expect = 2e-15
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 29/208 (13%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G  G V+    V  G+ VA+K    + +    +E  I   +++R   H NI+ Y+
Sbjct: 25  EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK--KELIINEILVMRENKHPNIVNYL 82

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
            S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH+     
Sbjct: 83  DSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---- 134

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  +M+PE+
Sbjct: 135 ----QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPYWMAPEV 186

Query: 317 LDESINMDCFESFKKADIYALGLVLWEV 344
           +             K DI++LG++  E+
Sbjct: 187 VTRK------AYGPKVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 70/239 (29%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           IG+G +  V        N   A+KI                    L  E  + Y+     
Sbjct: 9   IGEGSFSTVVLAKEKETNKEYAIKI---------------LDKRQLIKEKKVKYV---KI 50

Query: 202 SRNSCTQL----WLVTHYHSF---------------GSLYDHLNR-TTLNHHQMMKICLS 241
            +   T+L     ++  Y++F               G L  ++ +  +L+          
Sbjct: 51  EKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAE 110

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS--------- 292
           I+  L +LH+     +G   I HRD+K +NIL+  +    I DFG A             
Sbjct: 111 ILLALEYLHS-----KG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK 162

Query: 293 QLSNKMDIPPNPR-------VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             +  +D             VGT  Y+SPE+L+E        + K +D++ALG +++++
Sbjct: 163 GDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP------AGKSSDLWALGCIIYQM 215

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 27/207 (13%)

Query: 144 IGKGRYGEVWRG--VWHGENVA---VKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           IG+G YG V+R      GE VA   V++   RD    S   EI   + LRH NI+     
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELK-- 72

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           ++        ++LV  Y      SL D+   T  +  Q+  + L ++ GL +LH      
Sbjct: 73  EVVVGKHLDSIFLVMEYCEQDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF--- 128

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I HRD+K  N+L+   G   IADFGLA +Y   +  M     P+V T  Y +PE+
Sbjct: 129 -----IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM----TPKVVTLWYRAPEL 179

Query: 317 LDESINMDCFESFKKADIYALGLVLWE 343
           L     + C       D++A+G +L E
Sbjct: 180 L-----LGCTTYTTAIDMWAVGCILAE 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 28/207 (13%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           +G+G YG V   R    GE VA+K F   ++    ++T   E+     LRHENI+    +
Sbjct: 9   VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEA 68

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                    +L+LV  Y   +   L +  +   L    +      ++  + + H      
Sbjct: 69  FRRKG----RLYLVFEYVERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCH------ 117

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I HRDIK +NILV  +G   + DFG A     L  +   P    V T+ Y +PE+
Sbjct: 118 --SHNIIHRDIKPENILVSESGVLKLCDFGFA---RALRARPASPLTDYVATRWYRAPEL 172

Query: 317 LDESINMDCFESFKKADIYALGLVLWE 343
           L    N       K  D++A+G ++ E
Sbjct: 173 LVGDTNYG-----KPVDVWAIGCIMAE 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 75.1 bits (185), Expect = 3e-15
 Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 21/208 (10%)

Query: 144 IGKGRYGEVWRGVW--HGENVAVK-IFFSRDEASWSRETEIYSTVL--LRHENILGYIGS 198
           IG G +G+V+  V    GE +AVK I    ++    +E      VL  L+H N++ Y G 
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           ++  R    ++++   Y S G+L + L +   L+ H +    L ++ GL +LH+      
Sbjct: 68  EV-HRE---KVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHS-----H 118

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
           G   I HRDIK  NI +  NG   + DFG AV     +  M        GT  YM+PE++
Sbjct: 119 G---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI 175

Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
                       + ADI++LG V+ E+ 
Sbjct: 176 TGG---KGKGHGRAADIWSLGCVVLEMA 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 74.9 bits (184), Expect = 4e-15
 Identities = 76/306 (24%), Positives = 122/306 (39%), Gaps = 61/306 (19%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETE 180
           +R L K   L    G+G +G+V    +       GE VAVK        ++ + W +E  
Sbjct: 3   KRYLKKIRVL----GEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEIN 58

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
           I  T  L HENI+ Y G    S      L L+  Y   GSL D+L +  LN  Q++    
Sbjct: 59  ILKT--LYHENIVKYKGC--CSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQ 114

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQL 294
            I  G+ +LH++ +         HRD+ ++N+L+  +    I DFGLA +      Y ++
Sbjct: 115 QICEGMAYLHSQHY--------IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 166

Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
               D P         + + E L E       +    +D+++ G+ L+E+          
Sbjct: 167 REDGDSP-------VFWYAVECLKE------NKFSYASDVWSFGVTLYELLTHC------ 207

Query: 355 EEYKAPYHDLVPM-DPSFDDMRKVICID----QQRPVLPNRWVSDSTLNAMTKVMKECWH 409
           +  ++P      M  P    M  V  I+      R   P     +     +  +MK CW 
Sbjct: 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQE-----VYILMKNCWE 262

Query: 410 QNANVR 415
             A  R
Sbjct: 263 TEAKFR 268

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 74.1 bits (182), Expect = 6e-15
 Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 51/231 (22%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVL- 186
           ++RT    I++   +G G+YGEV+ GVW  +   VAVK    +++     E    + V+ 
Sbjct: 3   MERT---DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 57

Query: 187 -LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKIC 239
            ++H N++  +G        CT+    +++T + ++G+L D+L   NR  +N   ++ + 
Sbjct: 58  EIKHPNLVQLLGV-------CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 110

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQ 293
             I + + +L  + F         HRD+ ++N LV  N    +ADFGL+         + 
Sbjct: 111 TQISSAMEYLEKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              K  I         ++ +P    ES+  + F    K+D++A G++LWE+
Sbjct: 163 AGAKFPI---------KWTAP----ESLAYNKFSI--KSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 74.5 bits (183), Expect = 9e-15
 Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 32/212 (15%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENILGYIG 197
           IG G +G V+  R V   E VA+K      + S  +  +I   V     LRH N + Y G
Sbjct: 23  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L   +  L   ++  IC   + GL +LH+    
Sbjct: 83  CYLREHTA----WLVMEY-CLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH--- 134

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                   HRDIK+ NIL+   GT  +ADFG        S  +  P N  VGT  +M+PE
Sbjct: 135 -----ERIHRDIKAGNILLTEPGTVKLADFG--------SASLVSPANSFVGTPYWMAPE 181

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           ++   + MD  +   K D+++LG+   E+  R
Sbjct: 182 VI---LAMDEGQYDGKVDVWSLGITCIELAER 210

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 74.0 bits (182), Expect = 9e-15
 Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 65/292 (22%)

Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++       +  A KI     E     +  E +I S    +H NI+G   +
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC--KHPNIVGLYEA 70

Query: 199 DMTSRNSCTQLWLVTHY---HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                     LW++  +    +  S+   L R  L   Q+  +C  ++  L  LH+    
Sbjct: 71  YFYENK----LWILIEFCDGGALDSIMLELERG-LTEPQIRYVCRQMLEALNFLHSHK-- 123

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K+ NIL+  +G   +ADFG+    S  +       +  +GT  +M+PE
Sbjct: 124 ------VIHRDLKAGNILLTLDGDVKLADFGV----SAKNKSTLQKRDTFIGTPYWMAPE 173

Query: 316 ILDESINMDCFESFK------KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           +      + C E+FK      KADI++LG+ L E+ +           + P+H+L P   
Sbjct: 174 V------VAC-ETFKDNPYDYKADIWSLGITLIELAQM----------EPPHHELNP--- 213

Query: 370 SFDDMRKVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
               MR ++ I +  P     P++W S          +K C  ++ + R +A
Sbjct: 214 ----MRVLLKILKSEPPTLDQPSKWSSS-----FNDFLKSCLVKDPDDRPTA 256

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 44/225 (19%)

Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD-----EASWSRETEIYSTVLLRH 189
           +  +   IG+G +G V+  +    GE VA+K    R           RE  I +    +H
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALRE--IKALQACQH 58

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLV 247
             ++  +  D+    S     LV  Y     L + L      L   Q+      ++ G+ 
Sbjct: 59  PYVVKLL--DVFPHGSG--FVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVA 113

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           ++H           I HRD+K  N+L+  +G   IADFGLA  +   S +     + +V 
Sbjct: 114 YMHAN--------GIMHRDLKPANLLISADGVLKIADFGLARLF---SEEEPRLYSHQVA 162

Query: 308 TKRYMSPEIL------DESINMDCFESFKKADIYALGLVLWEVCR 346
           T+ Y +PE+L      D  +           D++A+G +  E+  
Sbjct: 163 TRWYRAPELLYGARKYDPGV-----------DLWAVGCIFAELLN 196

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 34/217 (15%)

Query: 144 IGKGRYGE--VWRGVWHGENVAVK-IFFSRDEASWSR----ETEIYSTVLLRHENILGYI 196
           +GKG +GE  ++R       V  K +  +R      R    E  I S  LL+H NI+ Y 
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILS--LLQHPNIIAYY 65

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVHLHTEI 253
              M        L +   Y + G+LYD + R          ++     IV+ + ++H   
Sbjct: 66  NHFMDD----NTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH--- 118

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                K  I HRDIK+ NI +   G   + DFG++     L ++  +     VGT  YMS
Sbjct: 119 -----KAGILHRDIKTLNIFLTKAGLIKLGDFGIS---KILGSEYSMAETV-VGTPYYMS 169

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           PE+  + +  +      K+DI+ALG VL+E+    + 
Sbjct: 170 PELC-QGVKYN-----FKSDIWALGCVLYELLTLKRT 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 73.3 bits (180), Expect = 1e-14
 Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 36/217 (16%)

Query: 140 LSECIGKGRYGEVWRG-------VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           +   IGKG +G V++        V+  + + +     R+      E  + +   L    I
Sbjct: 4   ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK--LDSSYI 61

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHL 249
           + Y  S +       +L +V  Y   G L+  L       L   Q+ +  + I+ GL HL
Sbjct: 62  IRYYESFLDKG----KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL 117

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H           I HRDIKS N+ +       I D G+A   S  +N      N  VGT 
Sbjct: 118 H--------SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF----ANTIVGTP 165

Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            Y+SPE+  D+  N       +K+D++ALG+VL+E C
Sbjct: 166 YYLSPELCEDKPYN-------EKSDVWALGVVLYECC 195

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 74.5 bits (183), Expect = 1e-14
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 41/239 (17%)

Query: 117 SLTSGSGSGLPLLIQRTLAKQISLSEC-----IGKGRYGEVWRGVWH--GENVAVKIFFS 169
           S +S S SG         +   SLSE      IG G  G V++ +    G   A+K+ + 
Sbjct: 56  SSSSSSASG------SAPSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYG 109

Query: 170 RDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL 225
             E +      RE EI   V   H N++     DM   N   Q+ L   +   GSL    
Sbjct: 110 NHEDTVRRQICREIEILRDV--NHPNVVKC--HDMFDHNGEIQVLL--EFMDGGSL---- 159

Query: 226 NRTTLNH-HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
             T +     +  +   I++G+ +LH        +  I HRDIK  N+L+ +     IAD
Sbjct: 160 EGTHIADEQFLADVARQILSGIAYLH--------RRHIVHRDIKPSNLLINSAKNVKIAD 211

Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           FG++     L+  MD P N  VGT  YMSPE ++  +N   ++ +   DI++LG+ + E
Sbjct: 212 FGVS---RILAQTMD-PCNSSVGTIAYMSPERINTDLNHGAYDGY-AGDIWSLGVSILE 265

Length = 353

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 72.2 bits (177), Expect = 2e-14
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF----FSRDEASWSRETEIYSTVLLRHENILGYIG 197
           +G+G +G V   R     + V +K       ++DE   + + E     LL H NI+ Y  
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERL-AAQNECQVLKLLSHPNIIEYYE 66

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN---RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
           + +  +     L +V  Y   G+L +++     + L+   ++   + I+  L H+HT++ 
Sbjct: 67  NFLEDK----ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL- 121

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                  I HRD+K++NIL+  +   V I DFG++   S  S    +     VGT  Y+S
Sbjct: 122 -------ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTV-----VGTPCYIS 169

Query: 314 PEILD-ESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           PE+ + +  N       +K+DI+ALG VL+E+    +A
Sbjct: 170 PELCEGKPYN-------QKSDIWALGCVLYELASLKRA 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 72.8 bits (179), Expect = 3e-14
 Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 79/312 (25%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFS----RDEASWSRETEIYSTV 185
           +++L + +G+G +G+V +    G         VAVK+       +D +    E E+   +
Sbjct: 13  RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMI 72

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-------------- 228
             +H+NI+  +G        CTQ   L++V  Y + G+L D L                 
Sbjct: 73  G-KHKNIINLLGV-------CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRP 124

Query: 229 ---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
              TL    ++     +  G+  L +       K  I HRD+ ++N+LV  +    IADF
Sbjct: 125 PEETLTQKDLVSFAYQVARGMEFLAS-------KKCI-HRDLAARNVLVTEDHVMKIADF 176

Query: 286 GLA--VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GLA  + +     K     N R+  K +M+PE L +   +   +S    D+++ G++LWE
Sbjct: 177 GLARDIHHIDYYRKTT---NGRLPVK-WMAPEALFD--RVYTHQS----DVWSFGVLLWE 226

Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKV 403
                    IF    +PY   +P++  F  +++   ++  +P         +    +  +
Sbjct: 227 ---------IFTLGGSPYPG-IPVEELFKLLKEGYRME--KPQ--------NCTQELYHL 266

Query: 404 MKECWHQNANVR 415
           M++CWH+  + R
Sbjct: 267 MRDCWHEVPSQR 278

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 72.2 bits (177), Expect = 3e-14
 Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 29/179 (16%)

Query: 170 RDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-- 227
           R+E+   +E  + S   ++H NI+ Y  S   + N    L++V  Y   G LY  +N   
Sbjct: 43  REESR--KEVAVLSN--MKHPNIVQYQESFEENGN----LYIVMDYCEGGDLYKKINAQR 94

Query: 228 -TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG 286
                  Q++   + I   L H+H           I HRDIKS+NI +  +GT  + DFG
Sbjct: 95  GVLFPEDQILDWFVQICLALKHVHDR--------KILHRDIKSQNIFLTKDGTIKLGDFG 146

Query: 287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +A     L++ +++     +GT  Y+SPEI +     +      K+DI+ALG VL+E+C
Sbjct: 147 IA---RVLNSTVEL-ARTCIGTPYYLSPEICENRPYNN------KSDIWALGCVLYEMC 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 72.8 bits (178), Expect = 3e-14
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)

Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 78  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 181

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 182 WMAPEVVTRK------AYGPKVDIWSLGIMAIEM 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 72.8 bits (178), Expect = 3e-14
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)

Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    +  G+ VA+K    + +    +E  I   +++R     
Sbjct: 19  KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK--KELIINEILVMRENKNP 76

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 77  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLH 132

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 133 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 180

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 181 WMAPEVVTRK------AYGPKVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 76/304 (25%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEAS------WSRETEIYST 184
           +   E +G+G +G+V++G   G N       VA+K    ++ A       + +E E+ S 
Sbjct: 7   VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL--KENAEPKVQQEFRQEAELMSD 64

Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------- 227
             L+H NI+  +G     + +C    ++  Y + G L++ L R                 
Sbjct: 65  --LQHPNIVCLLGVCTKEQPTC----MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVK 118

Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
           ++L+    + I + I  G+ +L +  F         HRD+ ++N LV    T  I+DFGL
Sbjct: 119 SSLDCSDFLHIAIQIAAGMEYLSSHHF--------VHRDLAARNCLVGEGLTVKISDFGL 170

Query: 288 AVS-YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           +   YS    ++    +  +   R+M P    E+I    F +  ++DI++ G+VLWE   
Sbjct: 171 SRDIYSADYYRV---QSKSLLPVRWMPP----EAILYGKFTT--ESDIWSFGVVLWE--- 218

Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE 406
                 IF     PY+     +        VI + + R +LP     +     +  +M E
Sbjct: 219 ------IFSYGLQPYYGFSNQE--------VIEMIRSRQLLP---CPEDCPARVYALMIE 261

Query: 407 CWHQ 410
           CW++
Sbjct: 262 CWNE 265

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 71.0 bits (174), Expect = 7e-14
 Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 69/291 (23%)

Query: 142 ECIGKGRYGEVWRGVWHGE-NVAVKI----FFSRDEASWSRETEIYSTVLLRHENILGYI 196
           E IGKG +G+V++GV  G   VAVK          +  + +E EI       H NI+  I
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQ--YDHPNIVKLI 58

Query: 197 GSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----NRTTLNHHQMMKICLSIVNGLVHL 249
           G        C Q   +++V      GSL   L    NR T+   +++++ L    G+ +L
Sbjct: 59  GV-------CVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVK--KLLQMSLDAAAGMEYL 109

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMDIPPNP 304
                  + K  I HRD+ ++N LV  N    I+DFG++       Y+       IP   
Sbjct: 110 -------ESKNCI-HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP--- 158

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
                ++ +PE L    N   + S  ++D+++ G++LWE          F     PY  +
Sbjct: 159 ----IKWTAPEAL----NYGRYTS--ESDVWSYGILLWE---------TFSLGDTPYPGM 199

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                S    R+ I    + P              + ++M +CW  +   R
Sbjct: 200 -----SNQQTRERIESGYRMP------APQLCPEEIYRLMLQCWAYDPENR 239

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 53/286 (18%)

Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++       V  A K+  ++ E     +  E +I ++    H NI+  + +
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 70

Query: 199 DMTSRNSCTQLWLVTHYHSFGSL---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                N    LW++  + + G++      L R  L   Q+  +C   +  L +LH     
Sbjct: 71  FYYENN----LWILIEFCAGGAVDAVMLELERP-LTEPQIRVVCKQTLEALNYLHEN--- 122

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ NIL   +G   +ADFG++   ++   + D      +GT  +M+PE
Sbjct: 123 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----SFIGTPYWMAPE 173

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++    + D    + KAD+++LG+ L E+           + + P+H+L P       MR
Sbjct: 174 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------QIEPPHHELNP-------MR 215

Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            ++ I +  P     P+RW S+         +K+C  +N + R + 
Sbjct: 216 VLLKIAKSEPPTLAQPSRWSSE-----FKDFLKKCLEKNVDARWTT 256

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 39/220 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRE--TEIYSTVLLRHENI 192
           ++ +L   +G G +GEVW G+W     VA+KI    D+    ++   E+ +   LRH+++
Sbjct: 6   EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKIL-KSDDLLKQQDFQKEVQALKRLRHKHL 64

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHL 249
           +      + S      ++++T     GSL   L       L    ++ +   +  G+ +L
Sbjct: 65  ISLFA--VCSVGE--PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL 120

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV-----SYSQLSNKMDIPPNP 304
             +           HRD+ ++NILV  +  C +ADFGLA       Y     K  IP   
Sbjct: 121 EEQ--------NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK--IP--- 167

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                ++ +P    E+ +   F +  K+D+++ G++L+E+
Sbjct: 168 ----YKWTAP----EAASHGTFST--KSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 69.6 bits (170), Expect = 2e-13
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 37/214 (17%)

Query: 144 IGKGRYGEVWRGVWHGEN---VAVKIFFSR-----DEASWSRETEIYSTVLLRHENILGY 195
           IG+G +G+++      ++   V  +I  ++      EAS   + E+     ++H NI+ +
Sbjct: 8   IGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEAS---KKEVILLAKMKHPNIVTF 64

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTE 252
             S   +     +L++V  Y   G L   +NR      +  Q++   + I  GL H+H  
Sbjct: 65  FASFQEN----GRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                    I HRDIKS+NI +  NG    + DFG+A    QL++ M++     VGT  Y
Sbjct: 121 --------KILHRDIKSQNIFLSKNGMVAKLGDFGIA---RQLNDSMELAYTC-VGTPYY 168

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +SPEI       +      K DI++LG VL+E+C
Sbjct: 169 LSPEICQNRPYNN------KTDIWSLGCVLYELC 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 69.7 bits (170), Expect = 3e-13
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 29/190 (15%)

Query: 159 GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQLWLVTHY 215
           G+ VAVK    R +    RE      V++R   HEN++    S +       +LW+V  +
Sbjct: 45  GKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVG----DELWVVMEF 98

Query: 216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK 275
              G+L D +  T +N  Q+  +CL+++  L  LH +         + HRDIKS +IL+ 
Sbjct: 99  LEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ--------GVIHRDIKSDSILLT 150

Query: 276 TNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEILDESINMDCFESFKKADI 334
            +G   ++DFG     S+     ++P     VGT  +M+PE++             + DI
Sbjct: 151 HDGRVKLSDFGFCAQVSK-----EVPRRKSLVGTPYWMAPELISR------LPYGPEVDI 199

Query: 335 YALGLVLWEV 344
           ++LG+++ E+
Sbjct: 200 WSLGIMVIEM 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 69.4 bits (170), Expect = 3e-13
 Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 39/214 (18%)

Query: 144 IGKGRYGEVWRGV--WHGENVA---VKIFFSRDEASWSRETEIYSTVLLR---HENILGY 195
           IGKG++  V++ +    G  VA   V+IF   D  +  R+  +    LL+   H N++ Y
Sbjct: 10  IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKA--RQDCLKEIDLLKQLDHPNVIKY 67

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSL-----YDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           + S + +     +L +V      G L     +    +  +    + K  + + + L H+H
Sbjct: 68  LASFIEN----NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           ++         I HRDIK  N+ +   G   + D GL       S+K     +  VGT  
Sbjct: 124 SK--------RIMHRDIKPANVFITATGVVKLGDLGLG---RFFSSKT-TAAHSLVGTPY 171

Query: 311 YMSPEILDES-INMDCFESFKKADIYALGLVLWE 343
           YMSPE + E+  N        K+DI++LG +L+E
Sbjct: 172 YMSPERIHENGYNF-------KSDIWSLGCLLYE 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 36/214 (16%)

Query: 144 IGKGRYGEVWRGVWHGE-----NVAVKIF----FSRDEASWSRETEIYSTVLLRHENILG 194
           +G G +G V RG W         VAVK       S     + +E  I  +  L HEN++ 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS--LDHENLIR 60

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVHLHT 251
             G  +T       L +VT     GSL D L +  L H     +    + I NG+ +L +
Sbjct: 61  LYGVVLTH-----PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES 115

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           + F         HRD+ ++NIL+ ++    I DFGL  +  Q  +   +  + +V    +
Sbjct: 116 KRF--------IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFA-W 166

Query: 312 MSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
            +P    ES+      +F  A D++  G+ LWE+
Sbjct: 167 CAP----ESLR---TRTFSHASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 69.1 bits (169), Expect = 3e-13
 Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 33/216 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK--IFFSRDEASWSR--------ETEIYSTVLLRHEN 191
           IG G +G V+ G+    GE +AVK     S   +S  R          EI     L+HEN
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK-ICLSIVNGLVHLH 250
           I+ Y+GS + +      L +   Y   GS+   LN        +++     I+ GL +LH
Sbjct: 68  IVQYLGSSLDA----DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH 123

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGT 308
                      I HRDIK  NILV   G   I+DFG++  +  + LS K +       G+
Sbjct: 124 NR--------GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGS 175

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             +M+PE++ ++         +KADI++LG ++ E+
Sbjct: 176 VFWMAPEVVKQTSYT------RKADIWSLGCLVVEM 205

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 49/220 (22%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKI----FFSRDEASWSRETEIYSTVLLR---HENI 192
           + +G G +G V+       GE VA+K     F+S +E    RE +     L +   H NI
Sbjct: 5   KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVK----SLRKLNEHPNI 60

Query: 193 LG----YIGSDMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNG 245
           +     +  +D        +L+ V  Y   G+LY           +   +  I   I+ G
Sbjct: 61  VKLKEVFREND--------ELYFVFEYME-GNLYQLMKDRKGKPFSESVIRSIIYQILQG 111

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP-NP 304
           L H+H   F         HRD+K +N+LV       IADFGLA    ++ ++   PP   
Sbjct: 112 LAHIHKHGF--------FHRDLKPENLLVSGPEVVKIADFGLA---REIRSR---PPYTD 157

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            V T+ Y +PEIL  S +          DI+ALG ++ E+
Sbjct: 158 YVSTRWYRAPEILLRSTSYSS-----PVDIWALGCIMAEL 192

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 33/187 (17%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRET--EIYSTVLLRHENILGYIGS 198
           IG+G YG+V++      GE VA+K I    ++  +      EI     LRH NI+     
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66

Query: 199 DMTSRNSCTQLWLVTHYHSF---GSLYDHLNRTTLNH-----HQMMKICLSIVNGLVHLH 250
            +TS+     +++V  Y      G L     + T +       Q+++       GL +LH
Sbjct: 67  -VTSKGK-GSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLE-------GLQYLH 117

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          I HRDIK  NIL+  +G   +ADFGLA  Y   + +       RV T  
Sbjct: 118 SN--------GILHRDIKGSNILINNDGVLKLADFGLARPY---TKRNSADYTNRVITLW 166

Query: 311 YMSPEIL 317
           Y  PE+L
Sbjct: 167 YRPPELL 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 68.9 bits (169), Expect = 7e-13
 Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 43/200 (21%)

Query: 144 IGKGRYGEVWRGVWH--GENVAVK---IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G +GEV++      G  VA+K   +   +D    +   EI     L+H N++  I  
Sbjct: 16  LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLI-- 73

Query: 199 DMT------SRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           DM       S+     +++VT Y  H    L ++     L   Q+    L ++ G+ +LH
Sbjct: 74  DMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLH 132

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----- 305
                   +  I HRDIK+ NIL+   G   IADFGLA  Y         PPNP+     
Sbjct: 133 --------ENHILHRDIKAANILIDNQGILKIADFGLARPYD------GPPPNPKGGGGG 178

Query: 306 --------VGTKRYMSPEIL 317
                   V T+ Y  PE+L
Sbjct: 179 GTRKYTNLVVTRWYRPPELL 198

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 68.5 bits (167), Expect = 9e-13
 Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTV----LLRHENILGYIG 197
           IG G +G V+       N  VAVK      + +  +  +I   V     L+H N + Y G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L  ++  L   ++  I    + GL +LH+    
Sbjct: 89  CYLKEHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--- 140

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRDIK+ NIL+   G   +ADFG A   S        P N  VGT  +M+PE
Sbjct: 141 -----NMIHRDIKAGNILLTEPGQVKLADFGSASKSS--------PANSFVGTPYWMAPE 187

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
           ++   + MD  +   K D+++LG+   E+  R           A YH
Sbjct: 188 VI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 231

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 68.2 bits (166), Expect = 1e-12
 Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENILGYIG 197
           IG G +G V+  R V   E VA+K      + S  +  +I   V     ++H N + Y G
Sbjct: 33  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L  ++  L   ++  I    + GL +LH+    
Sbjct: 93  CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--- 144

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRDIK+ NIL+   G   +ADFG        S  +  P N  VGT  +M+PE
Sbjct: 145 -----NMIHRDIKAGNILLTEPGQVKLADFG--------SASIASPANSFVGTPYWMAPE 191

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
           ++   + MD  +   K D+++LG+   E+  R           A YH
Sbjct: 192 VI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 235

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 68.2 bits (166), Expect = 1e-12
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
           IG G +G V+  R V + E VA+K      + S  +  +I   V     LRH N + Y G
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L  ++  L   ++  +    + GL +LH+    
Sbjct: 83  CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 134

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K+ NIL+   G   + DFG A   +        P N  VGT  +M+PE
Sbjct: 135 -----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--------PANXFVGTPYWMAPE 181

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
           ++   + MD  +   K D+++LG+   E+  R           A YH
Sbjct: 182 VI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 225

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 50/235 (21%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVK---IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +GKG YG V+  R +     +A+K      SR       E  ++S   L+H NI+ Y+GS
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY--LKHRNIVQYLGS 73

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIF 254
           D  S N   ++++       GSL   L         N   ++     I+ GL +LH    
Sbjct: 74  D--SENGFFKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN-- 127

Query: 255 GTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTK 309
                  I HRDIK  N+LV T +G   I+DFG +   + +        NP      GT 
Sbjct: 128 ------QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI--------NPCTETFTGTL 173

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           +YM+PE++D+            ADI++LG  + E+     A G     K P+ +L
Sbjct: 174 QYMAPEVIDKGPR----GYGAPADIWSLGCTIVEM-----ATG-----KPPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)

Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRETEIYSTVLLRHENI 192
           K+ +  E IG+G  G V+    V  G+ VA+K I   +         EI     L++ NI
Sbjct: 19  KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI 78

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           + ++ S +       +L++V  Y + GSL D +  T ++  Q+  +C   +  L  LH  
Sbjct: 79  VNFLDSFLVG----DELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN 134

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    + HRDIKS N+L+  +G+  + DFG     +   +K     +  VGT  +M
Sbjct: 135 --------QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPYWM 182

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PE++             K DI++LG++  E+
Sbjct: 183 APEVVTRK------AYGPKVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 61/296 (20%)

Query: 135 AKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFF--SRDEASWSRETEIYSTVLL 187
              +++ + IG G +GEV RG          +VA+K     S D+      TE       
Sbjct: 3   PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF 62

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNG 245
            H NI+   G    SR     + ++T Y   GSL   L  N       Q++ +   I +G
Sbjct: 63  DHPNIIRLEGVVTKSR----PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASG 118

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L    +         HRD+ ++NILV +N  C ++DFGL+        +        
Sbjct: 119 MKYLSEMNY--------VHRDLAARNILVNSNLVCKVSDFGLS--------RRLEDSEAT 162

Query: 306 VGTK------RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
             TK      R+ +P    E+I    F S   +D+++ G+V+WEV         + E   
Sbjct: 163 YTTKGGKIPIRWTAP----EAIAYRKFTS--ASDVWSFGIVMWEVMS-------YGE--R 207

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           PY D+     S  D+ K +    + P  P         +A+ ++M +CW ++ N R
Sbjct: 208 PYWDM-----SNQDVIKAVEDGYRLP--PPM----DCPSALYQLMLDCWQKDRNER 252

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 42/222 (18%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-------IFFSRDEASWSR----ETEIYSTVLLR 188
           E IGKG YG V+    V  GE +AVK       I    D           +EI +   L 
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLV 247
           H NI+ Y+G +     +   L +   Y   GS+   L        Q+++     ++ GL 
Sbjct: 67  HLNIVQYLGFE----TTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLA 122

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS----YSQLSNKMDIPPN 303
           +LH++         I HRD+K+ N+LV  +G C I+DFG++      Y    N       
Sbjct: 123 YLHSK--------GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQN------M 168

Query: 304 PRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
              G+  +M+PE++         + +  K DI++LG V+ E+
Sbjct: 169 SMQGSVFWMAPEVIHSY-----SQGYSAKVDIWSLGCVVLEM 205

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 39/189 (20%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           KI ++++ GL +L  +         I HRD+K  NILV + G   + DFG  VS  QL +
Sbjct: 103 KISIAVLRGLTYLREKH-------KIMHRDVKPSNILVNSRGEIKLCDFG--VS-GQLID 152

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC----------- 345
            M    N  VGT+ YMSPE L  +          ++DI++LGL L E+            
Sbjct: 153 SM---ANSFVGTRSYMSPERLQGT------HYTVQSDIWSLGLSLVEMAIGRYPIPPPDA 203

Query: 346 -RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICI--------DQQRPVLPNRWVSDST 396
                  G             P+     D  + + I        ++  P LP+   SD  
Sbjct: 204 KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEF 263

Query: 397 LNAMTKVMK 405
            + + K +K
Sbjct: 264 QDFVDKCLK 272

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 32/191 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWS----RETEIYSTVLLRHENILGYI 196
           IG+G +GEV+  R     + VA+K +    ++  +     RE +I    LL+HEN++  I
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQ--LLKHENVVNLI 77

Query: 197 ---GSDMTSRNSC-TQLWLVTHY--HSFGSLYDHLN-RTTLNH-HQMMKICLSIVNGLVH 248
               +  T  N      +LV  +  H    L  + N + TL+   ++MK+ L   NGL +
Sbjct: 78  EICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLL---NGLYY 134

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP--NPRV 306
           +H           I HRD+K+ NIL+  +G   +ADFGLA ++S   +K   P     RV
Sbjct: 135 IHRN--------KILHRDMKAANILITKDGILKLADFGLARAFSL--SKNSKPNRYTNRV 184

Query: 307 GTKRYMSPEIL 317
            T  Y  PE+L
Sbjct: 185 VTLWYRPPELL 195

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 66.3 bits (162), Expect = 3e-12
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFS----RDEASWSRETEIYST 184
             I+L   +G G +GEV+ G++ G +       VAVK        +DE+ +  E  I S 
Sbjct: 6   DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK 65

Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNH------HQMM 236
               H+NI+  IG            +++    + G L   L  NR             ++
Sbjct: 66  --FNHQNIVRLIGVSFER----LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLL 119

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
                +  G  +L    F         HRDI ++N L+   G      IADFG+A     
Sbjct: 120 FCARDVAKGCKYLEENHF--------IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYR 171

Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +   +  +P        ++M PE   + I    F S  K D+++ G++LWE+
Sbjct: 172 ASYYRKGGRAMLP-------IKWMPPEAFLDGI----FTS--KTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 66.2 bits (161), Expect = 3e-12
 Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 21/151 (13%)

Query: 144 IGKGRYGEVWRGVWHGEN-VAVKIFF--SRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           +G+G +GEVW G W+G   VA+K     +    ++ +E ++     LRHE ++      +
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK--LRHEKLV-----QL 66

Query: 201 TSRNSCTQLWLVTHYHSFGSLYDHLN---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
            +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++        
Sbjct: 67  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE------- 119

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
            +    HRD+++ NILV  N  C +ADFGLA
Sbjct: 120 -RMNYVHRDLRAANILVGENLVCKVADFGLA 149

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 53/240 (22%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-VAVKI----FFSRDEASWSRETEIYSTVLLRHEN 191
           +++L + IG G++G VW G W  +  VA+K       S ++  +  E ++   + L H  
Sbjct: 5   ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEED--FIEEAQV--MMKLSHPK 60

Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
           ++   G        CT+   + LV  +   G L D+L   R   +   ++ +CL +  G+
Sbjct: 61  LVQLYGV-------CTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGM 113

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            +L +            HRD+ ++N LV  N    ++DFG+          +D       
Sbjct: 114 AYLESSNV--------IHRDLAARNCLVGENQVVKVSDFGMTRFV------LDDQYTSST 159

Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
           GTK   ++ SPE+   S      +   K+D+++ G+++WEV         F E K PY +
Sbjct: 160 GTKFPVKWSSPEVFSFS------KYSSKSDVWSFGVLMWEV---------FSEGKTPYEN 204

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 65.9 bits (161), Expect = 3e-12
 Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 57/285 (20%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENILGYIGS 198
           +GKG YG V++   +   +  A+K       +   RE    EI     + H NI+ Y  +
Sbjct: 8   LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEI 253
            +     C     V  Y  FG L   ++     R  +   ++ +I + ++ GL  LH + 
Sbjct: 68  FLDGNKLCI----VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ- 122

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+KS NIL+  N    I D G++     L   M      ++GT  YM+
Sbjct: 123 -------KILHRDLKSANILLVANDLVKIGDLGIS---KVLKKNM---AKTQIGTPHYMA 169

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP-SFD 372
           PE+           S+ K+DI++LG +L+E+                     P +  S  
Sbjct: 170 PEVWK-----GRPYSY-KSDIWSLGCLLYEMATFA----------------PPFEARSMQ 207

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
           D+R  +    + P +P  +  D     +   ++        +R +
Sbjct: 208 DLRYKVQ-RGKYPPIPPIYSQD-----LQNFIRSMLQVKPKLRPN 246

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 66.0 bits (162), Expect = 5e-12
 Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 39/219 (17%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRET--EIYSTVL--LRHENILG 194
           E +G+G YG V++      GE VA+K I    +E         EI  ++L  L+H NI+ 
Sbjct: 5   EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREI--SLLKELKHPNIVK 62

Query: 195 YIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
            +   + +      L+LV  Y         D      L+ + +  I   ++ GL + H+ 
Sbjct: 63  LL-DVIHTERK---LYLVFEYCDMDLKKYLDK-RPGPLSPNLIKSIMYQLLRGLAYCHS- 116

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN---PRVGTK 309
                    I HRD+K +NIL+  +G   +ADFGLA ++        IP       V T 
Sbjct: 117 ----HR---ILHRDLKPQNILINRDGVLKLADFGLARAFG-------IPLRTYTHEVVTL 162

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
            Y +PEIL     +         DI+++G +  E+    
Sbjct: 163 WYRAPEIL-----LGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 65.9 bits (161), Expect = 5e-12
 Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 83/309 (26%)

Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILG 194
           +GKG +G V    +       GE VAVK            + RE EI  +  L+H+NI+ 
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKS--LQHDNIVK 69

Query: 195 YIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLH 250
           Y G       RN    L LV  Y  +GSL D+L  +R  L+H +++     I  G+ +L 
Sbjct: 70  YKGVCYSAGRRN----LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG 125

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           ++ +         HRD+ ++NILV++     I DFGL         K+ +P +      R
Sbjct: 126 SKRY--------VHRDLATRNILVESENRVKIGDFGLT--------KV-LPQDKEYYKVR 168

Query: 311 --------YMSPEILDESINMDCFESFKKA-DIYALGLVLWEV---CRRTKANGIFEEYK 358
                   + +PE L ES        F  A D+++ G+VL+E+     ++ +        
Sbjct: 169 EPGESPIFWYAPESLTESK-------FSVASDVWSFGVVLYELFTYSDKSCS-------- 213

Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPV-------LPNRW---VSDSTLNAMTKVMKECW 408
                     P  + MR +    Q + +       L N             +  +MKECW
Sbjct: 214 ----------PPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECW 263

Query: 409 HQNANVRLS 417
           + + + R S
Sbjct: 264 NNDPSQRPS 272

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 66.1 bits (161), Expect = 5e-12
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 33/213 (15%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           IGKG +G+V+  R        A+K+  S+ E     + E+  T+  R  NIL     D +
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVL-SKKEIV--AKKEVAHTIGER--NILVRTLLDES 55

Query: 202 --------SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTE 252
                   S  + + L+LVT Y S G L+ HL +         K  ++ +V  L HLH  
Sbjct: 56  PFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLH-- 113

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 K  I +RD+K +NIL+   G   + DFGL  S + L++  +   N   GT  Y+
Sbjct: 114 ------KYDIVYRDLKPENILLDATGHIALCDFGL--SKANLTD--NKTTNTFCGTTEYL 163

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PE+L +          K  D ++LG++++E+C
Sbjct: 164 APEVLLDEKGYT-----KHVDFWSLGVLVFEMC 191

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 66.0 bits (162), Expect = 7e-12
 Identities = 62/235 (26%), Positives = 89/235 (37%), Gaps = 68/235 (28%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILGYI 196
           IG G YG V   V    G  VA+K    +F    +A    RE ++     LRHENI+G  
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLR--HLRHENIIG-- 63

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLY--------DHLNR-------TTLNHHQ--MMKIC 239
                       +        F  +Y        D L++        T +H Q  + +I 
Sbjct: 64  ---------LLDILRPPSPEDFNDVYIVTELMETD-LHKVIKSPQPLTDDHIQYFLYQIL 113

Query: 240 LSIVNGLVHLHTEIFGTQGKPA-IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
                GL +LH+         A + HRD+K  NILV +N    I DFGLA          
Sbjct: 114 R----GLKYLHS---------ANVIHRDLKPSNILVNSNCDLKICDFGLARGV------D 154

Query: 299 DIPPNPR-----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                       V T+ Y +PE+L     +      K  DI+++G +  E+  R 
Sbjct: 155 PDEDEKGFLTEYVVTRWYRAPELL-----LSSSRYTKAIDIWSVGCIFAELLTRK 204

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 65.3 bits (160), Expect = 7e-12
 Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 67/295 (22%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           I KG YG V+  +    G+  A+K+   + +     + +     +L   +IL    S   
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVI-KKADMIRKNQVD----QVLTERDILSQAQSPYV 55

Query: 202 SRNSCT-----QLWLVTHYHSFGSLYDHLNRTTLNHH------QMMKICLS-IVNGLVHL 249
            +   +      L+LV  Y   G L       +L  +       + +I ++ IV  L +L
Sbjct: 56  VKLYYSFQGKKNLYLVMEYLPGGDLA------SLLENVGSLDEDVARIYIAEIVLALEYL 109

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---- 305
           H           I HRD+K  NIL+ +NG   + DFGL  S   L  +     +      
Sbjct: 110 H--------SNGIIHRDLKPDNILIDSNGHLKLTDFGL--SKVGLVRRQINLNDDEKEDK 159

Query: 306 --VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
             VGT  Y++PE++   +        K  D ++LG +L+E        GI      P+H 
Sbjct: 160 RIVGTPDYIAPEVI---LGQG---HSKTVDWWSLGCILYEFL-----VGI-----PPFHG 203

Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
             P +  F     ++    + P      VSD  ++ ++K++      +   RL A
Sbjct: 204 ETPEE-IFQ---NILNGKIEWPEDVE--VSDEAIDLISKLL----VPDPEKRLGA 248

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 65.4 bits (159), Expect = 7e-12
 Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 58/275 (21%)

Query: 140 LSECIGKGRYGEVWR--GVWHGENVAVKIFFSRDEASWSRETEIYSTV--LLRHENILGY 195
           + E IGKG YG+V++     +G   AVKI     +     E E Y+ +  L  H N++ +
Sbjct: 22  IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAE-YNILKALSDHPNVVKF 80

Query: 196 IG----SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------ICLSIVNG 245
            G     D+ + +   QLWLV    + GS+ D L +  L   + M+      I    + G
Sbjct: 81  YGMYYKKDVKNGD---QLWLVLELCNGGSVTD-LVKGFLKRGERMEEPIIAYILHEALMG 136

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L HLH             HRD+K  NIL+ T G   + DFG++   +QL++   +  N  
Sbjct: 137 LQHLHVN--------KTIHRDVKGNNILLTTEGGVKLVDFGVS---AQLTSTR-LRRNTS 184

Query: 306 VGTKRYMSPEI------LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           VGT  +M+PE+      LD + +  C       D+++LG+   E+      +G       
Sbjct: 185 VGTPFWMAPEVIACEQQLDSTYDARC-------DVWSLGITAIEL-----GDG-----DP 227

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSD 394
           P  DL PM   F   R       Q    P  W ++
Sbjct: 228 PLADLHPMRALFKIPRNPPPTLHQ----PELWSNE 258

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 64.8 bits (158), Expect = 9e-12
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 27/145 (18%)

Query: 214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL 273
            YH    +Y+          + +     I+ GL HLH           I +RD+K +N+L
Sbjct: 81  KYH----IYNV-GEPGFPEARAIFYAAQIICGLEHLHQR--------RIVYRDLKPENVL 127

Query: 274 VKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKAD 333
           +  +G   I+D GLAV               R GT  YM+PE+L   +       F   D
Sbjct: 128 LDDHGNVRISDLGLAVELKGGK-----KIKGRAGTPGYMAPEVLQGEV-----YDF-SVD 176

Query: 334 IYALGLVLWEVCRRTKANGIFEEYK 358
            +ALG  L+E+         F + K
Sbjct: 177 WFALGCTLYEMIA---GRSPFRQRK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 38/219 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFF--SRDEASWSRETEIYSTVLLRHENI 192
           + + L + +G G++GEVW G W+G   VAVK     +    S+  E +I     LRH+ +
Sbjct: 6   ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKK--LRHDKL 63

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +      + +  S   +++VT Y S GSL D L       L    ++ +   +  G+ ++
Sbjct: 64  V-----QLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 118

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                    +    HRD++S NILV     C IADFGLA          D     R G K
Sbjct: 119 E--------RMNYIHRDLRSANILVGDGLVCKIADFGLARLIE------DNEYTARQGAK 164

Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
              ++ +PE          +  F  K+D+++ G++L E+
Sbjct: 165 FPIKWTAPE-------AALYGRFTIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 68/303 (22%)

Query: 142 ECIGKGRYGEVWRG-VWHGENVAVK--IFFSRDEASWSRE-----TEIYSTVLLRHENIL 193
           E +GKG YG V+ G    G+ +AVK     + +  +  +E      E+     L+H NI+
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSF---GSLYDHLNR-TTLNHHQMMKICLSIVNGLVHL 249
            Y+G+       C     ++ +  F   GS+   LNR   L      K    I++G+ +L
Sbjct: 66  QYLGT-------CLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYL 118

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA---------VSYSQLSNKMDI 300
           H           + HRDIK  N+++  NG   + DFG A          ++S +   M  
Sbjct: 119 HNN--------CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMH- 169

Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
                 GT  +M+PE+++ES         +K+DI+++G  ++E+     A G     K P
Sbjct: 170 ------GTPYWMAPEVINES------GYGRKSDIWSIGCTVFEM-----ATG-----KPP 207

Query: 361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
              L  MD     +  +  I   R ++P   + DS   A    +  C  ++ + R SAL+
Sbjct: 208 ---LASMDR----LAAMFYIGAHRGLMPR--LPDSFSAAAIDFVTSCLTRDQHERPSALQ 258

Query: 421 VKK 423
           + +
Sbjct: 259 LLR 261

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 23/138 (16%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           KI +SIV  L +LH+++       ++ HRD+K  N+L+  NG   + DFG++     L +
Sbjct: 107 KIAVSIVKALEYLHSKL-------SVIHRDVKPSNVLINRNGQVKLCDFGIS---GYLVD 156

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF-- 354
            +        G K YM+PE ++  +N   ++   K+D+++LG+ + E+     A G F  
Sbjct: 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDV--KSDVWSLGITMIEL-----ATGRFPY 207

Query: 355 EEYKAPYHDL--VPMDPS 370
           + +K P+  L  V  +PS
Sbjct: 208 DSWKTPFQQLKQVVEEPS 225

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 35/237 (14%)

Query: 140 LSECIGKGRYGEVWRGVWHGENVAVKIFF--SRDEASWSR-ETEIYSTVLLRHENILGYI 196
           + +C        + +       VAVK     S  +      + EI ++  L+H NIL Y+
Sbjct: 6   IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYV 65

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL---SIVNGLVHLHTEI 253
               TS    ++L++V+   ++GS  D L          + I      ++N L ++H++ 
Sbjct: 66  ----TSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG 121

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY---SQLSNKMDIPPNPRVGTKR 310
           F         HR +K+ +IL+  +G  V++    +VS     +    +   P   V    
Sbjct: 122 F--------IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLP 173

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           ++SPE+L +  N+  +   +K+DIY++G+   E+     ANG       P+ D+   
Sbjct: 174 WLSPEVLQQ--NLQGYN--EKSDIYSVGITACEL-----ANGH-----VPFKDMPAT 216

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 35/176 (19%)

Query: 177 RETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL---YDHL----NRTT 229
           RE EI  +   +   I+ Y G+ +    S + + +   Y   GSL   Y  +     R  
Sbjct: 48  RELEINKSC--KSPYIVKYYGAFLD--ESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRI- 102

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
                + KI  S++ GL +LH+          I HRDIK  NIL+   G   + DFG  V
Sbjct: 103 -GEKVLGKIAESVLKGLSYLHSR--------KIIHRDIKPSNILLTRKGQVKLCDFG--V 151

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
           S  +L N +        GT  YM+PE I  +  ++        +D+++LGL L EV
Sbjct: 152 S-GELVNSLA---GTFTGTSFYMAPERIQGKPYSI-------TSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 49/220 (22%)

Query: 144 IGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEIYSTVL----LRHENILGY 195
           +G G +G V +G+W  E  ++KI  +    +D +      EI   +L    L H  I+  
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 196 IGSDMTSRNSC--TQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
           +G        C    L LVT     GSL DH+  +R +L+  +++  C+ I  G+ +L  
Sbjct: 75  LGI-------CPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE 127

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD-IPPNPRVGTKR 310
                     + HR++ ++NIL+K++    IADFG+A          D + P+     K+
Sbjct: 128 H--------RMVHRNLAARNILLKSDSIVQIADFGVA----------DLLYPD----DKK 165

Query: 311 YMSPEILDESINMDCFES--FKK----ADIYALGLVLWEV 344
           Y   E     I     ES  F +    +D+++ G+ +WE+
Sbjct: 166 YFYSEH-KTPIKWMALESILFGRYTHQSDVWSYGVTVWEM 204

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 35/144 (24%)

Query: 209 LWLVTHYHSFGSLYDHLNRTTLNHHQM----MKICLS-IVNGLVHLHTEIFGTQGKPAIA 263
           L+LV  Y   G L+ HL++      +      +   + IV  L +LH+      G   I 
Sbjct: 68  LYLVLEYAPGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHS-----LG---II 115

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSPEILDE 319
           +RD+K +NIL+  +G   + DFGLA        K       R     GT  Y++PE+L  
Sbjct: 116 YRDLKPENILLDADGHIKLTDFGLA--------KELSSEGSRTNTFCGTPEYLAPEVLLG 167

Query: 320 SINMDCFESFKKADIYALGLVLWE 343
                     K  D ++LG++L+E
Sbjct: 168 K------GYGKAVDWWSLGVLLYE 185

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%)

Query: 142 ECIGKGRYGEVWR--GVWHGENVAVKIFFSRDEASWSRETEIYSTV--LLRHENILGYIG 197
           E IGKG YG+V++      G   AVKI     +     E E Y+ +  L  H N++ + G
Sbjct: 28  ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAE-YNILQSLPNHPNVVKFYG 86

Query: 198 SDMTSRN-SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------ICLSIVNGLVHLH 250
               +      QLWLV    + GS+ + L +  L   Q +       I    + GL HLH
Sbjct: 87  MFYKADKLVGGQLWLVLELCNGGSVTE-LVKGLLICGQRLDEAMISYILYGALLGLQHLH 145

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                      I HRD+K  NIL+ T G   + DFG++   +QL++   +  N  VGT  
Sbjct: 146 NN--------RIIHRDVKGNNILLTTEGGVKLVDFGVS---AQLTSTR-LRRNTSVGTPF 193

Query: 311 YMSPEIL------DESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++      D S +  C       D+++LG+   E+
Sbjct: 194 WMAPEVIACEQQYDYSYDARC-------DVWSLGITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 63.1 bits (153), Expect = 5e-11
 Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 63/241 (26%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE----NVAVKIF----FSRDEASWSRETEIYSTVLL 187
           + I   + IG+G +G+V R +   +    N A+K+        D   ++ E E+    L 
Sbjct: 2   EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCK-LG 60

Query: 188 RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT---------------- 228
            H NI+  +G+       C     L++   Y  +G+L D L ++                
Sbjct: 61  HHPNIINLLGA-------CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTA 113

Query: 229 -TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
            TL   Q+++    +  G+ +L  + F         HRD+ ++N+LV  N    IADFGL
Sbjct: 114 STLTSQQLLQFASDVATGMQYLSEKQF--------IHRDLAARNVLVGENLASKIADFGL 165

Query: 288 A----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           +    V   +   ++ +         R+M+ E L+ S+         K+D+++ G++LWE
Sbjct: 166 SRGEEVYVKKTMGRLPV---------RWMAIESLNYSVYT------TKSDVWSFGVLLWE 210

Query: 344 V 344
           +
Sbjct: 211 I 211

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 62.9 bits (153), Expect = 5e-11
 Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 66/291 (22%)

Query: 138 ISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSR----ETEIYSTVL 186
           +S  + +G G +G+V     +G         VAVK+      +S       E +I S  L
Sbjct: 37  LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH-L 95

Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIV 243
             HENI+  +G+       CT    + ++T Y  +G L + L R        + +     
Sbjct: 96  GNHENIVNLLGA-------CTIGGPILVITEYCCYGDLLNFLRR---KRESFLTL----- 140

Query: 244 NGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNK 297
             L+    ++   +G   +A     HRD+ ++N+L+ T+G  V I DFGLA      SN 
Sbjct: 141 EDLLSFSYQV--AKGMAFLASKNCIHRDLAARNVLL-THGKIVKICDFGLARDIMNDSNY 197

Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY 357
           + +  N R+  K +M+P    ESI  +C  +F ++D+++ G++LWE         IF   
Sbjct: 198 V-VKGNARLPVK-WMAP----ESI-FNCVYTF-ESDVWSYGILLWE---------IFSLG 240

Query: 358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
             PY  + P+D  F  + K    +  R   P    ++     +  +MK CW
Sbjct: 241 SNPYPGM-PVDSKFYKLIK----EGYRMAQPEHAPAE-----IYDIMKTCW 281

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 21/151 (13%)

Query: 144 IGKGRYGEVWRGVWHGEN-VAVKIFF--SRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           +G+G +GEVW G W+G   VA+K     +    ++ +E +I     LRH+ ++      +
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKK--LRHDKLV-----PL 66

Query: 201 TSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVHLHTEIFGTQ 257
            +  S   +++VT +   GSL D L      +    Q++ +   I +G+ ++        
Sbjct: 67  YAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE------- 119

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
            +    HRD+++ NILV  N  C IADFGLA
Sbjct: 120 -RMNYIHRDLRAANILVGDNLVCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 70/299 (23%)

Query: 144 IGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHENILGYIGSD 199
           +G G++G V  G W  +  VA+K     +E + S E  I    +   L H  ++   G  
Sbjct: 12  LGSGQFGVVHLGKWRAQIKVAIKAI---NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGV- 67

Query: 200 MTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                 CTQ   L++VT +   G L ++L   +  L+   ++ +C  +  G+ +L    F
Sbjct: 68  ------CTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK---RY 311
                    HRD+ ++N LV + G   ++DFG+          +D       G K   ++
Sbjct: 122 --------IHRDLAARNCLVSSTGVVKVSDFGMT------RYVLDDEYTSSSGAKFPVKW 167

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
             PE+     N   + S  K+D+++ G+++WEV         F E K P+          
Sbjct: 168 SPPEVF----NFSKYSS--KSDVWSFGVLMWEV---------FTEGKMPFE-------KK 205

Query: 372 DDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI 426
            +   V  I +     RP L +  V         +VM  CWH+    R +   + + + 
Sbjct: 206 SNYEVVEMISRGFRLYRPKLASMTV--------YEVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 31/168 (18%)

Query: 222 YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV 281
           Y+ L    +    + KI ++ V  L +L  E+        I HRD+K  NIL+  NG   
Sbjct: 97  YEVLKSV-IPEEILGKIAVATVKALNYLKEEL-------KIIHRDVKPSNILLDRNGNIK 148

Query: 282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           + DFG++    QL +   I      G + YM+PE +D S   D ++   ++D+++LG+ L
Sbjct: 149 LCDFGIS---GQLVDS--IAKTRDAGCRPYMAPERIDPS-ARDGYDV--RSDVWSLGITL 200

Query: 342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
           +EV     A G F     PY      +  FD + +V+  D   P+L N
Sbjct: 201 YEV-----ATGKF-----PYPKW---NSVFDQLTQVVKGDP--PILSN 233

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 61.5 bits (149), Expect = 1e-10
 Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 53/294 (18%)

Query: 144 IGKGRYGEVW------RGVWHGENVAVKIFF--SRDEASWSRETEIYSTVLLRHENILGY 195
           +G+G +G+V        G   GE VAVK     S        + EI     L HENI+ Y
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            G  + + +    + L+  +   GSL ++L  N+  +N  Q +K  + I  G+ +L    
Sbjct: 72  KG--ICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL---- 125

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPRVG 307
               G     HRD+ ++N+LV++     I DFGL  +      Y  + + +D P      
Sbjct: 126 ----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSP------ 175

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN----GIFEEYKAPYHD 363
              + +PE L +S      + +  +D+++ G+ L+E+     +      +F +   P H 
Sbjct: 176 -VFWYAPECLIQS------KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG 228

Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
            +    +   + +V+   ++ P  PN    +     M K    CW    + R +
Sbjct: 229 QM----TVTRLVRVLEEGKRLPRPPN--CPEEVYQLMRK----CWEFQPSKRTT 272

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 70/292 (23%), Positives = 119/292 (40%), Gaps = 61/292 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + I L + +G G++GEVW G ++    VAVK           +   +     L   N++ 
Sbjct: 6   ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL---------KPGTMSVQAFLEEANLMK 56

Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGL 246
            +  D   R          ++++T Y + GSL D L         + K+      I  G+
Sbjct: 57  TLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 116

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            ++         +    HRD+++ N+LV  +  C IADFGLA          D     R 
Sbjct: 117 AYIE--------RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE------DNEYTARE 162

Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
           G K   ++ +P    E+IN   F    K+D+++ G++L+E         I    K PY  
Sbjct: 163 GAKFPIKWTAP----EAINFGSFTI--KSDVWSFGILLYE---------IVTYGKIPY-- 205

Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
             P   + D M  +    Q+   +P     ++  + +  +MK CW + A  R
Sbjct: 206 --PGMSNSDVMSAL----QRGYRMPR---MENCPDELYDIMKTCWKEKAEER 248

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 61.5 bits (149), Expect = 1e-10
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 20/129 (15%)

Query: 219 GSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
           G L+ HL++  +     M+   + I+ GL H+H           + +RD+K  NIL+  +
Sbjct: 82  GDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF--------VVYRDLKPANILLDEH 133

Query: 278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
           G   I+D GLA  +S+        P+  VGT  YM+PE+L + +  D       AD ++L
Sbjct: 134 GHVRISDLGLACDFSKKK------PHASVGTHGYMAPEVLQKGVAYD-----SSADWFSL 182

Query: 338 GLVLWEVCR 346
           G +L+++ R
Sbjct: 183 GCMLFKLLR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 48/279 (17%)

Query: 140 LSECIGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRET-----EIYSTVLLRHEN 191
           L + +G+G +GEV+       G  +AVK + F  D    S+E      EI     LRH+ 
Sbjct: 6   LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDR 65

Query: 192 ILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
           I+ Y G   D   +    +L +   Y   GS+ D L     L  +   +    I+ G+ +
Sbjct: 66  IVQYYGCLRDPEEK----KLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSY 121

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH+ +        I HRDIK  NIL  + G   + DFG A    Q             GT
Sbjct: 122 LHSNM--------IVHRDIKGANILRDSAGNVKLGDFG-ASKRIQTICMSGTGIKSVTGT 172

Query: 309 KRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
             +MSPE++         E + +KAD++++   + E+             K P+ +   M
Sbjct: 173 PYWMSPEVISG-------EGYGRKADVWSVACTVVEMLTE----------KPPWAEYEAM 215

Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE 406
              F      I     +P+LP+  VSD+  + + ++  E
Sbjct: 216 AAIFK-----IATQPTKPMLPDG-VSDACRDFLKQIFVE 248

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 60.4 bits (146), Expect = 3e-10
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 27/157 (17%)

Query: 144 IGKGRYGEVWRGVW--HGEN----VAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           +G G +G V++G+W   GEN    VA+K+   R+  S     EI     L    ++  +G
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVL--RENTSPKANKEI-----LDEAYVMAGVG 67

Query: 198 SDMTSR--NSC--TQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
           S    R    C  + + LVT    +G L D++  N+  +    ++  C+ I  G+ +L  
Sbjct: 68  SPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE- 126

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                  +  + HRD+ ++N+LVK+     I DFGLA
Sbjct: 127 -------EVRLVHRDLAARNVLVKSPNHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 33/176 (18%)

Query: 233 HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           H + +I +++V GL +L +          I HRD+K  N+LV T G   + DFG++   +
Sbjct: 95  HVLGRIAVAVVKGLTYLWSL--------KILHRDVKPSNMLVNTRGQVKLCDFGVS---T 143

Query: 293 QLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
           QL N +       VGT  YM+PE I  E   +        +D+++LG+   E+     A 
Sbjct: 144 QLVNSI---AKTYVGTNAYMAPERISGEQYGI-------HSDVWSLGISFMEL-----AL 188

Query: 352 GIFEEYKAPYHDLVPMDPSFDDMRKVICI-DQQRPVLPNRWVSDSTLNAMTKVMKE 406
           G F     PY  +     S   ++ + CI D+  PVLP    S+  ++ +T+ M++
Sbjct: 189 GRF-----PYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRK 239

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 38/232 (16%)

Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      G   A K+  ++ E     +  E EI +T    H  I+  +G+
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC--NHPYIVKLLGA 77

Query: 199 DMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                    +LW++  +   G+   +   L+R  L   Q+  IC  ++  L +LH+    
Sbjct: 78  FYWD----GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVICRQMLEALQYLHSM--- 129

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ N+L+  +G   +ADFG++    +   + D      +GT  +M+PE
Sbjct: 130 -----KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD----SFIGTPYWMAPE 180

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           ++      D    + KADI++LG+ L E+           + + P+H+L PM
Sbjct: 181 VVMCETMKDTPYDY-KADIWSLGITLIEMA----------QIEPPHHELNPM 221

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 60.0 bits (145), Expect = 4e-10
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 31/210 (14%)

Query: 144 IGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSR---ETEIYSTVLLRHENILGYIGS 198
           +GKG YGEV   R    G+   +K    R+ +   R   E E      L+H NI+ Y  S
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFG 255
                     L++V  +   G LY  L       L  +Q+++  + I   L +LH +   
Sbjct: 68  ---WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK--- 121

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K++N+ +       + D G+A     L N+ D+  +  +GT  YMSPE
Sbjct: 122 -----HILHRDLKTQNVFLTRTNIIKVGDLGIA---RVLENQCDM-ASTLIGTPYYMSPE 172

Query: 316 IL-DESINMDCFESFKKADIYALGLVLWEV 344
           +  ++  N        K+D++ALG  ++E+
Sbjct: 173 LFSNKPYNY-------KSDVWALGCCVYEM 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 66/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 16  KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 75

Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               R
Sbjct: 76  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128

Query: 228 TT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 180

Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGLA   + + +      N R+  K +M+PE L + +         ++D+++ G+++WE 
Sbjct: 181 FGLARDVNNI-DYYKKTTNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 231

Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   +P++  F  +++   +D  +P         +  N +  +M
Sbjct: 232 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTNELYMMM 272

Query: 405 KECWH 409
           ++CWH
Sbjct: 273 RDCWH 277

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 59.7 bits (144), Expect = 5e-10
 Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 63/235 (26%)

Query: 142 ECIGKGRYGEVWRGVWHGE----NVAVKIF----FSRDEASWSRETEIYSTVLLRHENIL 193
           + IG+G +G+V +     +    + A+K         D   ++ E E+    L  H NI+
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHHPNII 59

Query: 194 GYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------TLNHH 233
             +G+       C     L+L   Y   G+L D L ++                 TL+  
Sbjct: 60  NLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 112

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----V 289
           Q++     +  G+ +L  + F         HRD+ ++NILV  N    IADFGL+    V
Sbjct: 113 QLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFGLSRGQEV 164

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              +   ++ +         R+M+ E L+ S+          +D+++ G++LWE+
Sbjct: 165 YVKKTMGRLPV---------RWMAIESLNYSVYT------TNSDVWSYGVLLWEI 204

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 60.0 bits (145), Expect = 5e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 29/160 (18%)

Query: 204 NSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
            S T L LV    + G L  H+       L   +++     I  G++HLH+         
Sbjct: 63  ESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-------- 114

Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDES 320
            I +RD+K +N+L+   G C ++D GLAV       K       R GT  YM+PEIL E 
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLAVEL-----KDGKTITQRAGTNGYMAPEILKE- 168

Query: 321 INMDCFESFK-KADIYALGLVLWE-VCRRTKANGIFEEYK 358
                 E +    D +A+G  ++E V  RT     F+++K
Sbjct: 169 ------EPYSYPVDWFAMGCSIYEMVAGRTP----FKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 59.2 bits (143), Expect = 9e-10
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 20/129 (15%)

Query: 219 GSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
           G L+ HL++  +   + M+     I+ GL H+H           + +RD+K  NIL+  +
Sbjct: 82  GDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF--------VVYRDLKPANILLDEH 133

Query: 278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
           G   I+D GLA  +S+        P+  VGT  YM+PE+L +    D       AD ++L
Sbjct: 134 GHVRISDLGLACDFSKKK------PHASVGTHGYMAPEVLQKGTAYD-----SSADWFSL 182

Query: 338 GLVLWEVCR 346
           G +L+++ R
Sbjct: 183 GCMLFKLLR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 9e-10
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 34/190 (17%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK-IFFSRDEA----SWSRETEIYSTVLLR------HE 190
           IG+G YG V++   +  G  VA+K +     E     S  RE       LL+      H 
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIA-----LLKQLESFEHP 61

Query: 191 NILGYIGSDMTSRNS-CTQLWLV-THYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLV 247
           NI+  +      R     +L LV  H     + Y     +  L    +  +   ++ G+ 
Sbjct: 62  NIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            LH+          I HRD+K +NILV ++G   IADFGLA  YS      ++     V 
Sbjct: 122 FLHSH--------RIVHRDLKPQNILVTSDGQVKIADFGLARIYS-----FEMALTSVVV 168

Query: 308 TKRYMSPEIL 317
           T  Y +PE+L
Sbjct: 169 TLWYRAPEVL 178

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 59.1 bits (144), Expect = 1e-09
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           L  + GL +LH           I HRD+K  N+L+ ++G   +ADFGLA S+   + KM 
Sbjct: 109 LMTLRGLEYLH--------SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM- 159

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                +V T+ Y +PE+L               D++++G +  E+  R 
Sbjct: 160 ---THQVVTRWYRAPELL-----FGARHYGVGVDMWSVGCIFAELLLRV 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 53/199 (26%), Positives = 77/199 (38%), Gaps = 55/199 (27%)

Query: 262 IAHRDIKSKNILVKTNGTCVIADFGLAVSYS-----QLSNKMDIP---------PNPRVG 307
           + HRD+K  NIL+   G  VI D+G A+         L   +D           P   VG
Sbjct: 134 VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVG 193

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC------RRTKANGI-------F 354
           T  YM+PE L          + +  DIYALG++L+++       RR K   I        
Sbjct: 194 TPDYMAPERLLGV------PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILS 247

Query: 355 EEYKAPYHDLVPM-----------DP-----SFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
               APY ++ P            DP     S  ++++ +   +        W   +TL 
Sbjct: 248 PIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDL---EPHLQGSPEWTVKATL- 303

Query: 399 AMTKVMKECWHQNANVRLS 417
            MTK  K CW     + LS
Sbjct: 304 -MTK-KKSCWKFYEPILLS 320

Length = 932

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 31/171 (18%)

Query: 209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDI 267
           ++LV      G L  HL++    +  Q+      IV  L +LH++         I HRDI
Sbjct: 75  MYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK--------GIIHRDI 126

Query: 268 KSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
           K  NIL+   G   I DF +A  V+   L+           GT  YM+PE+L       C
Sbjct: 127 KPDNILLDEQGHVHITDFNIATKVTPDTLTTST-------SGTPGYMAPEVL-------C 172

Query: 326 FESFKKA-DIYALGLVLWEVCR-----RTKANGIFEEYKAPYHDLVPMDPS 370
            + +  A D ++LG+  +E  R     R  +  I ++ +A       + P+
Sbjct: 173 RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA 223

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 92/320 (28%)

Query: 138 ISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRD----------EASWSRETE 180
           I+L   +G+G +G V+ G+  G         VA+K                EAS  +E  
Sbjct: 8   ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN 67

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTT 229
            +  V L     LG +     S    T   +V    + G L  +L               
Sbjct: 68  CHHVVRL-----LGVV-----STGQPT--LVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA- 288
               + +++   I +G+ +L  + F         HRD+ ++N +V  + T  I DFG+  
Sbjct: 116 PTLQKFIQMAAEIADGMAYLAAKKF--------VHRDLAARNCMVAEDLTVKIGDFGMTR 167

Query: 289 ----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                 Y +   K  +P        R+M+PE L + +    F +  K+D+++ G+VLWE+
Sbjct: 168 DIYETDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--KSDVWSFGVVLWEM 214

Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVIC---IDQQRPVLPNRWVSDSTLNAMT 401
              T A       + PY  L     S +++ K +            P++           
Sbjct: 215 A--TLA-------EQPYQGL-----SNEEVLKFVIDGGHLDLPENCPDKL---------L 251

Query: 402 KVMKECWHQNANVRLSALRV 421
           ++M+ CW  N  +R + L +
Sbjct: 252 ELMRMCWQYNPKMRPTFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 42/219 (19%)

Query: 138 ISLSECIGKGRYGEVWRGVWHG-ENVAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L + +G G++GEVW G ++G   VA+K   S  + S S E  +    L   L+H  ++
Sbjct: 8   LKLVKKLGAGQFGEVWMGYYNGHTKVAIK---SLKQGSMSPEAFLAEANLMKQLQHPRLV 64

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L       L  ++++ +   I  G+  + 
Sbjct: 65  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGT 308
            + +         HRD+++ NILV     C IADFGLA  +  ++ +         R G 
Sbjct: 120 RKNY--------IHRDLRAANILVSETLCCKIADFGLARLIEDNEYT--------AREGA 163

Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           K   ++ +P    E+IN   F    K+D+++ G++L E+
Sbjct: 164 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEI 196

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 33/166 (19%)

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH--LNRTTLNHHQMM-----KIC 239
           ++H NI+ +      S  +   L++V  Y   G L     L R  L     +     ++C
Sbjct: 55  MKHPNIVAF----KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMC 110

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           L    G+ H+H        +  + HRDIKSKNI +  NG   + DFG   S   L++   
Sbjct: 111 L----GVQHIH--------EKRVLHRDIKSKNIFLTQNGKVKLGDFG---SARLLTSPGA 155

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                 VGT  Y+ PEI +   NM       K+DI++LG +L+E+C
Sbjct: 156 YACT-YVGTPYYVPPEIWE---NM---PYNNKSDIWSLGCILYELC 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 22/142 (15%)

Query: 207 TQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           T+L L+  Y + G L+ HL  R      ++      IV  L HLH        K  I +R
Sbjct: 78  TKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH--------KLGIIYR 129

Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL---DESIN 322
           DIK +NIL+ +NG  V+ DFGL+  + +   +         GT  YM+P+I+   D   +
Sbjct: 130 DIKLENILLDSNGHVVLTDFGLSKEFHEDEVER---AYSFCGTIEYMAPDIVRGGDGGHD 186

Query: 323 MDCFESFKKADIYALGLVLWEV 344
                  K  D +++G++++E+
Sbjct: 187 -------KAVDWWSMGVLMYEL 201

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 33/212 (15%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVK---IFFSRD-EASWSRETEIYSTVLLRHENILGYIG 197
           IG+G++ EV+R     +   VA+K   IF   D +A      EI     L H N++ Y+ 
Sbjct: 10  IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD 69

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSL-----YDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           S +       +L +V      G L     Y    +  +    + K  + + + + H+H+ 
Sbjct: 70  SFIED----NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR 125

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    + HRDIK  N+ +   G   + D GL   +S  +       +  VGT  YM
Sbjct: 126 --------RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA----AHSLVGTPYYM 173

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           SPE + E  N   F    K+DI++LG +L+E+
Sbjct: 174 SPERIHE--NGYNF----KSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 82/326 (25%)

Query: 138 ISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEAS-----WSRETEIYSTVLL 187
           I L   +G+G +G+V+    +      + + V +   +D +      + RE E+ +   L
Sbjct: 7   IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN--L 64

Query: 188 RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--------------TTL 230
           +HE+I+ + G        C +   L +V  Y   G L   L                  L
Sbjct: 65  QHEHIVKFYGV-------CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAEL 117

Query: 231 NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL--- 287
              QM+ I   I  G+V+L ++ F         HRD+ ++N LV  N    I DFG+   
Sbjct: 118 TQSQMLHIAQQIAAGMVYLASQHF--------VHRDLATRNCLVGENLLVKIGDFGMSRD 169

Query: 288 --AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             +  Y ++     +P        R+M P    ESI    F +  ++D+++LG+VLWE  
Sbjct: 170 VYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSLGVVLWE-- 214

Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
                  IF   K P++ L        +   + CI Q R +   R    +    +  +M 
Sbjct: 215 -------IFTYGKQPWYQL-------SNNEVIECITQGRVLQRPR----TCPKEVYDLML 256

Query: 406 ECWHQNANVRLSALRVKKTLIKLACA 431
            CW +  ++RL+   +   L  LA A
Sbjct: 257 GCWQREPHMRLNIKEIHSLLQNLAKA 282

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 59/190 (31%), Positives = 83/190 (43%), Gaps = 31/190 (16%)

Query: 144 IGKGRYGEVWR-----GVWHGENVAVKIF-------FSRDEASWSRETEIYSTVLLRHEN 191
           +GKG YG+V++     G   G+  A+K+          +D A    E  I   V  +H  
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV--KHPF 61

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLH 250
           I+  I +  T      +L+L+  Y S G L+ HL R  +         LS I   L HLH
Sbjct: 62  IVDLIYAFQTG----GKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLH 117

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                 QG   I +RD+K +NIL+   G   + DFGL     + S       +   GT  
Sbjct: 118 Q-----QG---IIYRDLKPENILLDAQGHVKLTDFGLC----KESIHEGTVTHTFCGTIE 165

Query: 311 YMSPEILDES 320
           YM+PEIL  S
Sbjct: 166 YMAPEILMRS 175

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 16/144 (11%)

Query: 209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           L+LV  Y   G L   LNR        M +  L+ +V  +  +H   +         HRD
Sbjct: 76  LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY--------VHRD 127

Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           IK +N+L+   G   +ADFG A   +  +NKM     P VGT  Y++PE+L  ++N D  
Sbjct: 128 IKPENVLIDRTGHIKLADFGSAARLT--ANKMVNSKLP-VGTPDYIAPEVL-TTMNGDGK 183

Query: 327 ESFK-KADIYALGLVLWE-VCRRT 348
            ++  + D ++LG++ +E +  R+
Sbjct: 184 GTYGVECDWWSLGVIAYEMIYGRS 207

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 29/165 (17%)

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH-----QMMKICLS 241
           LRH NI+ Y  + + +     +L++V        L +H N            ++  I + 
Sbjct: 66  LRHPNIVRYYKTFLEN----DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           +V  L +LH E         I HRD+   NI++  +    I DFGLA    Q  +K+   
Sbjct: 122 MVLALRYLHKEKR-------IVHRDLTPNNIMLGEDDKVTITDFGLA-KQKQPESKL--- 170

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVC 345
               VGT  Y  PEI+         E + +KAD++A G +L+++C
Sbjct: 171 -TSVVGTILYSCPEIVKN-------EPYGEKADVWAFGCILYQMC 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 57.6 bits (139), Expect = 3e-09
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 54/304 (17%)

Query: 138 ISLSECIGKGRYGEVWRG----VWHGEN-VAVKIFFSRDEASWSRETEIYSTVL--LRHE 190
           + + E IG G +GEV RG        E  VA+K   S       R+    ++++    H 
Sbjct: 6   VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 65

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGLVH 248
           NI+   G    SR     + ++T +   G+L  +   N       Q++ +   I  G+ +
Sbjct: 66  NIIHLEGVVTKSR----PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L    +         HRD+ ++NILV +N  C ++DFGL+  + +  +  D      +G 
Sbjct: 122 LSEMNY--------VHRDLAARNILVNSNLVCKVSDFGLS-RFLE-DDTSDPTYTSSLGG 171

Query: 309 K---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           K   R+ +PE +        +  F  A D+++ G+V+WEV         + E   PY D+
Sbjct: 172 KIPIRWTAPEAI-------AYRKFTSASDVWSYGIVMWEVMS-------YGE--RPYWDM 215

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
                S  D+   I  D + P   +         A+ ++M +CW ++ N R    ++  T
Sbjct: 216 -----SNQDVINAIEQDYRLPPPMD------CPTALHQLMLDCWQKDRNARPKFGQIVST 264

Query: 425 LIKL 428
           L K+
Sbjct: 265 LDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|219878 pfam08515, TGF_beta_GS, Transforming growth factor beta type I GS-motif

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 19/29 (65%), Positives = 25/29 (86%)

Query: 108 STLREYLDASLTSGSGSGLPLLIQRTLAK 136
            TL++ L+ S TSGSGSGLPLL+QRT+A+
Sbjct: 1   KTLKDLLEDSTTSGSGSGLPLLVQRTIAR 29

This motif is found in the transforming growth factor beta (TGF-beta) type I which regulates cell growth and differentiation. The name of the GS motif comes from its highly conserved GSGSGLP signature in the cytoplasmic juxtamembrane region immediately preceding the protein's kinase domain. Point mutations in the GS motif modify the signaling ability of the type I receptor. Length = 29

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 77/306 (25%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN---------VAVKIF----FSRDEASWSRETEIYS 183
           ++ L + +G+G +G+V R   +G +         VAVK+       +D A    E E+  
Sbjct: 13  RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMK 72

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------- 225
            ++ +H+NI+  +G        CTQ   L+++  Y + G+L + L               
Sbjct: 73  -LIGKHKNIINLLGV-------CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDIT 124

Query: 226 --NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L       + +  I HRD+ ++N+LV  +    IA
Sbjct: 125 KVPEEQLSFKDLVSCAYQVARGMEYL-------ESRRCI-HRDLAARNVLVTEDNVMKIA 176

Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           DFGLA     + +      N R+  K +M+PE L + +         ++D+++ G+++WE
Sbjct: 177 DFGLARGVHDI-DYYKKTSNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGILMWE 228

Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKV 403
                    IF    +PY   +P++  F  +R+   +D  +P       S+ T + +  +
Sbjct: 229 ---------IFTLGGSPY-PGIPVEELFKLLREGHRMD--KP-------SNCT-HELYML 268

Query: 404 MKECWH 409
           M+ECWH
Sbjct: 269 MRECWH 274

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 66/303 (21%), Positives = 118/303 (38%), Gaps = 79/303 (26%)

Query: 144 IGKGRYGEVWRGVWHGEN-------VAVKIFFSRDE----ASWSRETEIYSTVLLRHENI 192
           +G+G +GEV+     G         V VK      +    + + RE +++    L H+N+
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRK--LSHKNV 70

Query: 193 LGYIGSDMTSRNSCTQL---WLVTHYHSFGSLYDHLNRTT-----------LNHHQMMKI 238
           +  +G        C +    +++  Y   G L   L R T           L+  Q + +
Sbjct: 71  VRLLGL-------CREAEPHYMILEYTDLGDLKQFL-RATKSKDEKLKPPPLSTKQKVAL 122

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS--- 295
           C  I  G+ HL    F         HRD+ ++N LV        +   + VS   LS   
Sbjct: 123 CTQIALGMDHLSNARF--------VHRDLAARNCLVS-------SQREVKVSLLSLSKDV 167

Query: 296 -NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
            N         +   R+++PE + E    D F +  K+D+++ G+++WE         +F
Sbjct: 168 YNSEYYKLRNALIPLRWLAPEAVQE----DDFST--KSDVWSFGVLMWE---------VF 212

Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
            + + P++ L        D   +  +   +  LP   V +   + + K+M  CW  N   
Sbjct: 213 TQGELPFYGL-------SDEEVLNRLQAGKLELP---VPEGCPSRLYKLMTRCWAVNPKD 262

Query: 415 RLS 417
           R S
Sbjct: 263 RPS 265

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|197743 smart00467, GS, GS motif

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 20/31 (64%), Positives = 25/31 (80%), Gaps = 1/31 (3%)

Query: 108 STLREYLDASLTSGSGSGLPLLIQRTLAKQI 138
            TL + L+   TSGSGSGLPLL+QRT+A+QI
Sbjct: 1   KTLSDLLE-DTTSGSGSGLPLLVQRTVARQI 30

Aa approx. 30 amino acid motif that precedes the kinase domain in types I and II TGF beta receptors. Mutation of two or more of the serines or threonines in the TTSGSGSG of TGF-beta type I receptor impairs phosphorylation and signaling activity. Length = 30

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 80/332 (24%), Positives = 131/332 (39%), Gaps = 87/332 (26%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEAS---WSRETEIYSTV 185
           + I L   +G+G +G+V+    +  +       VAVK       A+   + RE E+ +  
Sbjct: 5   RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN- 63

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------------NRT 228
            L+HE+I+ + G           L +V  Y   G L   L                  + 
Sbjct: 64  -LQHEHIVKFYGVCGDG----DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 118

Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL- 287
            L   QM+ I   I +G+V+L ++ F         HRD+ ++N LV  N    I DFG+ 
Sbjct: 119 ELGLSQMLHIASQIASGMVYLASQHF--------VHRDLATRNCLVGANLLVKIGDFGMS 170

Query: 288 ----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
               +  Y ++     +P        R+M P    ESI    F +  ++D+++ G++LWE
Sbjct: 171 RDVYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSFGVILWE 217

Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNA 399
                    IF   K P+  L   +        + CI Q    +RP +  + V D     
Sbjct: 218 ---------IFTYGKQPWFQLSNTE-------VIECITQGRVLERPRVCPKEVYD----- 256

Query: 400 MTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
              +M  CW +    RL+   + K L  L  A
Sbjct: 257 ---IMLGCWQREPQQRLNIKEIYKILHALGKA 285

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 56.9 bits (137), Expect = 4e-09
 Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 87/322 (27%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEAS---WSRET 179
           I+R   + I L   +G+G +G+V+    H          VAVK      E++   + RE 
Sbjct: 2   IKR---RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREA 58

Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTTLNHH--- 233
           E+ +  +L+H++I+ + G        CT+   L +V  Y   G L   L     +     
Sbjct: 59  ELLT--VLQHQHIVRFYGV-------CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILA 109

Query: 234 -------------QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC 280
                        QM+ I   I +G+V+L +  F         HRD+ ++N LV      
Sbjct: 110 GGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF--------VHRDLATRNCLVGQGLVV 161

Query: 281 VIADFGL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIY 335
            I DFG+     +  Y ++  +  +P        R+M P    ESI    F +  ++DI+
Sbjct: 162 KIGDFGMSRDIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDIW 208

Query: 336 ALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDS 395
           + G+VLWE         IF   K P++ L        +   + CI Q R +   R    +
Sbjct: 209 SFGVVLWE---------IFTYGKQPWYQL-------SNTEAIECITQGRELERPR----T 248

Query: 396 TLNAMTKVMKECWHQNANVRLS 417
               +  +M+ CW +    R+ 
Sbjct: 249 CPPEVYAIMQGCWQREPQQRMV 270

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 58.6 bits (141), Expect = 4e-09
 Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 59/251 (23%)

Query: 144 IGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS--RETEIYSTVL-------LRHENILG 194
           IG GR+GEV+  V H      + FF     S+   +E E    V+       L+H+NI+ 
Sbjct: 21  IGNGRFGEVFL-VKHKRT---QEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVR 76

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHL 249
           YI   +   N   +L+++  +   G L  ++ +       +  H ++ I   +++ L + 
Sbjct: 77  YIDRFLNKANQ--KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYC 134

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKT---------------NGTCV--IADFGLAVSYS 292
           H    G  G+  + HRD+K +NI + T               NG  +  I DFGL+ +  
Sbjct: 135 HNLKDGPNGE-RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193

Query: 293 QLSNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
                ++   +  VGT  Y SPE+L  E+ + D      K+D++ALG +++E+C      
Sbjct: 194 -----IESMAHSCVGTPYYWSPELLLHETKSYD-----DKSDMWALGCIIYELCSG---- 239

Query: 352 GIFEEYKAPYH 362
                 K P+H
Sbjct: 240 ------KTPFH 244

Length = 1021

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 56.8 bits (137), Expect = 5e-09
 Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 66/240 (27%)

Query: 144 IGKGRYGEVWR----GVWHGEN---VAVKIFFSRDEASWSRETEIYSTVLLRHE----NI 192
           IG+G +G V++    G+   E    VAVK+   ++EAS   + +      L  E    NI
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEFDHPNI 70

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------------------NRTT 229
           +  +G     +  C    L+  Y ++G L + L                       N   
Sbjct: 71  VKLLGVCAVGKPMC----LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
           L+  + + I   +  G+ +L    F         HRD+ ++N LV  N    IADFGL  
Sbjct: 127 LSCTEQLCIAKQVAAGMAYLSERKF--------VHRDLATRNCLVGENMVVKIADFGLSR 178

Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              +  Y + S    IP        R+M P    ESI  + + +  ++D++A G+VLWE+
Sbjct: 179 NIYSADYYKASENDAIP-------IRWMPP----ESIFYNRYTT--ESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 56.9 bits (137), Expect = 5e-09
 Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 87/311 (27%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 19  RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 78

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 79  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130

Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L +       K  I HRD+ ++N+LV  +    IA
Sbjct: 131 QVPEEQLSFKDLVSCAYQVARGMEYLAS-------KKCI-HRDLAARNVLVTEDNVMKIA 182

Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 183 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 229

Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D  +P         +  N
Sbjct: 230 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMD--KP--------SNCTN 269

Query: 399 AMTKVMKECWH 409
            +  +M++CWH
Sbjct: 270 ELYMMMRDCWH 280

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 56.4 bits (136), Expect = 6e-09
 Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 60/289 (20%)

Query: 144 IGKGRYGEVWRG-VWHGENVA-VKIFFSRDEASWSRETEIYSTV----LLRHENILGYIG 197
           IG G +G+V  G    G + A V +   R  A+   +      V     L H N+L  +G
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMM-------KICLSIVNGLVHLH 250
             + S        LV  +   G L ++L R+       M       ++   + +GL+ LH
Sbjct: 63  QCIES----IPYLLVLEFCPLGDLKNYL-RSNRGMVAQMAQKDVLQRMACEVASGLLWLH 117

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
              F         H D+  +N  +  + +  I D+GLA    Q      I  +      R
Sbjct: 118 QADF--------IHSDLALRNCQLTADLSVKIGDYGLA--LEQYPEDYYITKDCHAVPLR 167

Query: 311 YMSPEILDE-SINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           +++PE+++    ++   +  KK++I++LG+ +WE         +F     PY DL     
Sbjct: 168 WLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWE---------LFTAADQPYPDL----- 213

Query: 370 SFDDMRKVICIDQQ----RPVL----PNRWVSDSTLNAMTKVMKECWHQ 410
           S + + K +  +Q     +P L     +RW          +VM+ CW  
Sbjct: 214 SDEQVLKQVVREQDIKLPKPQLDLKYSDRWY---------EVMQFCWLD 253

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 44/200 (22%)

Query: 143 CIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYST-----VLLR---HE 190
           CIG+G YG V++        G+  A+K F    +    + T I  +      LLR   HE
Sbjct: 7   CIGRGTYGRVYKAKRKNGKDGKEYAIKKF----KGDKEQYTGISQSACREIALLRELKHE 62

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHH---QMMK-ICLSIVN 244
           N++  +   +   +    ++L+  Y  H    +    +R          M+K +   I+N
Sbjct: 63  NVVSLVEVFLEHADKS--VYLLFDYAEHDLWQIIKF-HRQAKRVSIPPSMVKSLLWQILN 119

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVIADFGLAVSYSQLSNKMDI 300
           G+ +LH+          + HRD+K  NILV       G   I D GLA    +L N    
Sbjct: 120 GVHYLHSNW--------VLHRDLKPANILVMGEGPERGVVKIGDLGLA----RLFNAPLK 167

Query: 301 PP---NPRVGTKRYMSPEIL 317
           P    +P V T  Y +PE+L
Sbjct: 168 PLADLDPVVVTIWYRAPELL 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 56.6 bits (136), Expect = 9e-09
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 19/108 (17%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           K+ ++++ GL +L         K  I HRD+K  NILV + G   + DFG++    QL +
Sbjct: 107 KVSIAVIKGLTYLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLID 156

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            M    N  VGT+ YMSPE L  +          ++DI+++GL L E+
Sbjct: 157 SM---ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVEM 195

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 23/155 (14%)

Query: 144 IGKGRYGEVWRGVW--HGEN----VAVKIFFSRDEASWSRET--EIYSTVLLRHENILGY 195
           +G G +G V++G+W   GE     VA+K          ++E   E Y    + + ++   
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L    
Sbjct: 75  LGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER- 128

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                   + HRD+ ++N+LVKT     I DFGLA
Sbjct: 129 -------RLVHRDLAARNVLVKTPQHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 56/283 (19%)

Query: 140 LSECIGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRET-----EIYSTVLLRHEN 191
           L + +G+G +G V+       G  +AVK + F  +    S+E      EI     L HE 
Sbjct: 6   LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHER 65

Query: 192 ILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
           I+ Y G   D   R     L +   +   GS+ D L     L  +   K    I+ G+ +
Sbjct: 66  IVQYYGCLRDPMERT----LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSY 121

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL----SNKMDIPPNP 304
           LH+ +        I HRDIK  NIL  + G   + DFG +     +    +    +    
Sbjct: 122 LHSNM--------IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSV---- 169

Query: 305 RVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
             GT  +MSPE++         E + +KADI+++G  + E+             K P+ +
Sbjct: 170 -TGTPYWMSPEVISG-------EGYGRKADIWSVGCTVVEMLTE----------KPPWAE 211

Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE 406
              M   F      I      PVLP   VSD   + + ++  E
Sbjct: 212 FEAMAAIFK-----IATQPTNPVLPPH-VSDHCRDFLKRIFVE 248

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 43/222 (19%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRET------EIYSTVLLRHENI 192
           + +G G +   +  R V  G  +AVK + + R+ +S   E       EI     L H +I
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSF------GSLYDHL-NRTTLNHHQMMKICLSIVNG 245
           +  +G+  T  +S        H++ F      GS+   L          ++     ++ G
Sbjct: 66  IRMLGA--TCEDS--------HFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRG 115

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNP 304
           L +LH           I HRD+K  N+L+ + G  + IADFG A   +            
Sbjct: 116 LSYLHEN--------QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ 167

Query: 305 RVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            +GT  +M+PE+L  E     C       D++++G V+ E+ 
Sbjct: 168 LLGTIAFMAPEVLRGEQYGRSC-------DVWSVGCVIIEMA 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 40/218 (18%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           + L + +G G++GEVW   ++    VAVK           +   +     L   N++  +
Sbjct: 8   LKLEKKLGAGQFGEVWMATYNKHTKVAVKTM---------KPGSMSVEAFLAEANVMKTL 58

Query: 197 GSDMTSRNSCT----QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHL 249
             D   +         ++++T + + GSL D L     +   + K+      I  G+  +
Sbjct: 59  QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 118

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
               +         HRD+++ NILV  +  C IADFGLA          D     R G K
Sbjct: 119 EQRNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREGAK 164

Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              ++ +P    E+IN   F    K+D+++ G++L E+
Sbjct: 165 FPIKWTAP----EAINFGSFTI--KSDVWSFGILLMEI 196

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 16/139 (11%)

Query: 207 TQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           T+L L+  Y + G L+ HL  R      ++      IV  L HLH        +  I +R
Sbjct: 78  TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLH--------QLGIIYR 129

Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
           DIK +NIL+ + G  V+ DFGL+  +  L+ + +       GT  YM+PE+    I    
Sbjct: 130 DIKLENILLDSEGHVVLTDFGLSKEF--LAEEEE-RAYSFCGTIEYMAPEV----IRGGS 182

Query: 326 FESFKKADIYALGLVLWEV 344
               K  D ++LG++ +E+
Sbjct: 183 GGHDKAVDWWSLGVLTFEL 201

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 40/200 (20%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEA-----SWSRETEIYSTVLLRHENILG 194
           E IG+G YG V++       E VA+K     D+      S  RE  +     L+H+NI+ 
Sbjct: 6   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE--LKHKNIVR 63

Query: 195 YIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
               D+   +   +L LV  Y        +D  N   ++   +      ++ GL   H+ 
Sbjct: 64  LY--DVLHSDK--KLTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH 118

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP---NPRVGTK 309
                    + HRD+K +N+L+  NG   +ADFGLA ++        IP    +  V T 
Sbjct: 119 --------NVLHRDLKPQNLLINKNGELKLADFGLARAFG-------IPVRCYSAEVVTL 163

Query: 310 RYMSPEIL------DESINM 323
            Y  P++L        SI+M
Sbjct: 164 WYRPPDVLFGAKLYSTSIDM 183

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 60/301 (19%)

Query: 138 ISLSECIGKGRYGEVWRG------VWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRH 189
           +   E +G+  +G++++G      + H + VA+K     +      E +  ++++  L H
Sbjct: 7   VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH 66

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTH--YHSF------------GSLYDHLNRTTLNHHQM 235
            NI+  +G     +  C     +     H F             S  D   +++L+H   
Sbjct: 67  PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126

Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-YSQL 294
           + I + I  G+ +L +  F         H+D+ ++NIL+       I+D GL+   YS  
Sbjct: 127 LHIAIQIAAGMEYLSSHFF--------VHKDLAARNILIGEQLHVKISDLGLSREIYS-- 176

Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
           ++   + P   +   R+M PE    +I    F S   +DI++ G+VLWE         IF
Sbjct: 177 ADYYRVQPKSLLPI-RWMPPE----AIMYGKFSS--DSDIWSFGVVLWE---------IF 220

Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
                PY+        F + ++VI + ++R +LP    S+     M  +M ECW +  + 
Sbjct: 221 SFGLQPYY-------GFSN-QEVIEMVRKRQLLP---CSEDCPPRMYSLMTECWQEGPSR 269

Query: 415 R 415
           R
Sbjct: 270 R 270

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 72/325 (22%), Positives = 123/325 (37%), Gaps = 90/325 (27%)

Query: 136 KQISLSECIGKGRYGEV----------------WRGVWHGENVAVKIFFSRDEAS----- 174
           + ++  E +G+G++GEV                         V V +   R +AS     
Sbjct: 5   QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNARE 64

Query: 175 -WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----- 225
            + +E +I S   L   NI   +G        CT    L ++  Y   G L   L     
Sbjct: 65  DFLKEVKILSR--LSDPNIARLLGV-------CTVDPPLCMIMEYMENGDLNQFLQKHVA 115

Query: 226 -------NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
                  N  +L+   ++ +   I +G+ +L +  F         HRD+ ++N LV  N 
Sbjct: 116 ETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF--------VHRDLATRNCLVGKNY 167

Query: 279 TCVIADFGL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKAD 333
           T  IADFG+     +  Y ++  +    P P     R+M+ E    S+ +  F +  K+D
Sbjct: 168 TIKIADFGMSRNLYSSDYYRVQGR---APLP----IRWMAWE----SVLLGKFTT--KSD 214

Query: 334 IYALGLVLWEV---CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR 390
           ++A G+ LWE+   CR             PY  L       ++       D ++  LP  
Sbjct: 215 VWAFGVTLWEILTLCREQ-----------PYEHL-TDQQVIENAGHFFRDDGRQIYLPRP 262

Query: 391 WVSDSTLNAMTKVMKECWHQNANVR 415
                 +    ++M ECW ++   R
Sbjct: 263 PNCPKDI---YELMLECWRRDEEDR 284

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 38/213 (17%)

Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYS--TVLLR---HENILGYI 196
           IGKG +G+V       E    AVK+   +       E  I S   VLL+   H  ++G  
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFG 255
            S  T+     +L+ V  Y + G L+ HL R         +     I + L +LH+    
Sbjct: 63  FSFQTA----DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL--- 115

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRY 311
                 I +RD+K +NIL+ + G  V+ DFGL         K +I  N       GT  Y
Sbjct: 116 -----NIVYRDLKPENILLDSQGHIVLTDFGLC--------KENIEHNGTTSTFCGTPEY 162

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           ++PE+L +          +  D + LG VL+E+
Sbjct: 163 LAPEVLHKQ------PYDRTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 45/222 (20%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYI 196
           E IG+G YG V++G     G+ VA+K      E      T I    LL   +H NI+   
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL------SIVNGLVHLH 250
              M      ++L+L+  + S   L  +L+  +L   Q M   L       I+ G++  H
Sbjct: 66  DVLMQE----SRLYLIFEFLSM-DLKKYLD--SLPKGQYMDAELVKSYLYQILQGILFCH 118

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRD+K +N+L+   G   +ADFGLA ++        IP   RV T  
Sbjct: 119 SR--------RVLHRDLKPQNLLIDNKGVIKLADFGLARAFG-------IP--VRVYTHE 161

Query: 311 -----YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
                Y +PE+L  S            DI+++G +  E+  +
Sbjct: 162 VVTLWYRAPEVLLGSPRYST-----PVDIWSIGTIFAEMATK 198

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 67/307 (21%), Positives = 135/307 (43%), Gaps = 79/307 (25%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFSRDEASWSRETEIYSTVLL 187
           +++L + +G+G +G+V      G           VAVK+   +D+A+    +++ S + +
Sbjct: 13  RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKML--KDDATDKDLSDLVSEMEM 70

Query: 188 -----RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN------------- 226
                +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              
Sbjct: 71  MKMIGKHKNIINLLGA-------CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDT 123

Query: 227 ----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI 282
                  L    ++     +  G+ +L ++           HRD+ ++N+LV  +    I
Sbjct: 124 CKLPEEQLTFKDLVSCAYQVARGMEYLASQ--------KCIHRDLAARNVLVTEDNVMKI 175

Query: 283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           ADFGLA     + +      N R+  K +M+PE L + +         ++D+++ G++LW
Sbjct: 176 ADFGLARDVHNI-DYYKKTTNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLLW 227

Query: 343 EVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK 402
           E         IF    +PY   +P++  F  +++   +D  +P         +  + +  
Sbjct: 228 E---------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTHELYM 267

Query: 403 VMKECWH 409
           +M+ECWH
Sbjct: 268 IMRECWH 274

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 35/210 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           +G+G YG V   +    G+ VA+K F   ++    ++    EI     LRHEN++  I  
Sbjct: 9   VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLI-- 66

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIF 254
           ++  R    +L+LV  +  H+   + D L +    L+  ++ K    I+ G+   H+   
Sbjct: 67  EVFRRKK--RLYLVFEFVDHT---VLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH-- 119

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRDIK +NILV  +G   + DFG A +   L+   ++  +  V T+ Y +P
Sbjct: 120 ------NIIHRDIKPENILVSQSGVVKLCDFGFART---LAAPGEVYTD-YVATRWYRAP 169

Query: 315 EILDESINMDCFESFKKA-DIYALGLVLWE 343
           E+L           + +A DI+A+G ++ E
Sbjct: 170 ELLVGDT------KYGRAVDIWAVGCLVTE 193

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)

Query: 137 QISLSECIGKGRYGEVWRGVWH---GENVAVK-IFFSRDEASWSRETEIYSTVLLRHENI 192
           +I + + +GKG YG V++ V H   G  +A+K I    DE+ ++   +I   + + H+ +
Sbjct: 2   EIEVLDELGKGNYGSVYK-VLHRPTGVTMAMKEIRLELDESKFN---QIIMELDILHKAV 57

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTT-LNHHQMMKICLSIVNGLVH 248
             YI     +      +++   Y   GS   LY     T  +    + +I  ++V GL  
Sbjct: 58  SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKF 117

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L  E         I HRD+K  N+LV  NG   + DFG++ +      K +I      G 
Sbjct: 118 LKEEH-------NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI------GC 164

Query: 309 KRYMSPEILDESINMDCFESFK-KADIYALGLVLWE 343
           + YM+PE + +S   +   ++  ++D+++LGL + E
Sbjct: 165 QSYMAPERI-KSGGPNQNPTYTVQSDVWSLGLSILE 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 28/198 (14%)

Query: 154 RGVWHGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL 211
           RG    E V  K     DE  A+++R +E++      H  I+ +   D  S +   +L L
Sbjct: 88  RGSDPKEKVVAKFVMLNDERQAAYAR-SELHCLAACDHFGIVKHF-DDFKSDD---KLLL 142

Query: 212 VTHYHSFGSLYDHLNRTTLNH-----HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           +  Y S G L   + +    H     +++  +   IV  L  +H+          + HRD
Sbjct: 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR--------KMMHRD 194

Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +KS NI +   G   + DFG +  YS  S  +D+  +   GT  Y++PE+ +        
Sbjct: 195 LKSANIFLMPTGIIKLGDFGFSKQYSD-SVSLDV-ASSFCGTPYYLAPELWERK------ 246

Query: 327 ESFKKADIYALGLVLWEV 344
              KKAD+++LG++L+E+
Sbjct: 247 RYSKKADMWSLGVILYEL 264

Length = 478

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 36/230 (15%)

Query: 132 RTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKI-----FFSRDEASWSRETEI--- 181
           +  AK+  +S  +G G  G V   + V  GE  AVK+         D+     E      
Sbjct: 28  KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN 87

Query: 182 --YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLN----HHQ 234
             + +++  HE+   +   D  +  +   + LV  Y + G L   + +R   N     H+
Sbjct: 88  CDFFSIVKCHED---FAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHE 144

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
              + + ++  + H+H++         + HRDIKS NIL+ +NG   + DFG +  Y+  
Sbjct: 145 AGLLFIQVLLAVHHVHSK--------HMIHRDIKSANILLCSNGLVKLGDFGFSKMYAAT 196

Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            +  D       GT  Y++PEI           S KKAD+++LG++L+E+
Sbjct: 197 VS--DDVGRTFCGTPYYVAPEIWRR-----KPYS-KKADMFSLGVLLYEL 238

Length = 496

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 22/102 (21%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           +V G+  LH        +  I HRDIK +N+L+   G   + DFGL+        +  + 
Sbjct: 106 VVLGVEDLH--------QRGIIHRDIKPENLLIDQTGHLKLTDFGLS--------RNGLE 149

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
               VGT  Y++PE +   +  D     K +D ++LG V++E
Sbjct: 150 NKKFVGTPDYLAPETI-LGVGDD-----KMSDWWSLGCVIFE 185

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 54.7 bits (131), Expect = 4e-08
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 19/108 (17%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           K+ ++++ GL +L         K  I HRD+K  NILV + G   + DFG++    QL +
Sbjct: 107 KVSIAVLRGLAYLRE-------KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLID 156

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            M    N  VGT+ YMSPE L  +          ++DI+++GL L E+
Sbjct: 157 SM---ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVEL 195

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 60/289 (20%)

Query: 144 IGKGRYGEVWRG-VWHGEN---VAVKIFFS----RDEASWSRETEIYSTVLLRHENILGY 195
           IG G +G+V  G V  G     V VK        +++  +  E + Y +  L+H N+L  
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS--LQHSNLLQC 60

Query: 196 IGSDMTSRNSCTQL---WLVTHYHSFGSLYDHL------NRTTLNHHQMMKICLSIVNGL 246
           +G        CT++    LV  +   G L  +L         T +   + ++   I  GL
Sbjct: 61  LGQ-------CTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGL 113

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD--IPPNP 304
           +HLH   F         H D+  +N L+  + T  I D+GL    S    K D  + P+ 
Sbjct: 114 LHLHKNNF--------IHSDLALRNCLLTADLTVKIGDYGL----SHNKYKEDYYVTPDQ 161

Query: 305 RVGTKRYMSPEILDE-SINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                R+++PE++DE   N+   +  K++++++LG+ +WE         +FE    PY  
Sbjct: 162 LWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWE---------LFELGSQPY-- 210

Query: 364 LVPMDPSFDDMRKVIC--IDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                    D  +V+   + +Q+  LP   +     +   +VM+ CW Q
Sbjct: 211 -----RHLSD-EQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCWLQ 253

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 22/126 (17%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 120 LDHERMSYLLYQMLCGIKHLHS--------AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
           +    +N M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+    K
Sbjct: 172 TAC--TNFM---MTPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEL---VK 217

Query: 350 ANGIFE 355
            + IF+
Sbjct: 218 GSVIFQ 223

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 21/109 (19%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           KI +++V GL +L+           I HRDIK  NILV + G   + DFG++    +L N
Sbjct: 107 KIAVAVVEGLTYLYNVH-------RIMHRDIKPSNILVNSRGQIKLCDFGVS---GELIN 156

Query: 297 KMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
            +    +  VGT  YMSPE I      +       K+D+++LG+ + E+
Sbjct: 157 SI---ADTFVGTSTYMSPERIQGGKYTV-------KSDVWSLGISIIEL 195

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 29/189 (15%)

Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEA-----SWSRETEIYSTVLLRHENI--LG 194
           IG+G YG+V++      GE VA+K     +E      +  RE +I     L H NI  L 
Sbjct: 15  IGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ--LNHRNIVNLK 72

Query: 195 YIGSD----MTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
            I +D    +  +      +LV  Y  H    L +       +   +      ++ GL +
Sbjct: 73  EIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNY 131

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
            H + F         HRDIK  NIL+   G   +ADFGLA  Y+   ++   P   +V T
Sbjct: 132 CHKKNF--------LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR---PYTNKVIT 180

Query: 309 KRYMSPEIL 317
             Y  PE+L
Sbjct: 181 LWYRPPELL 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 38/262 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRET-----EIYSTVLLRHENILGY 195
           +G+G +G V+    V  G  +A K + F  +    S+E      EI     L+HE I+ Y
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G  +  R   T L +   Y   GS+ D L     L      K    I+ G+ +LH+ + 
Sbjct: 70  YGC-LRDRAEKT-LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM- 126

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRDIK  NIL  + G   + DFG A    Q             GT  +MSP
Sbjct: 127 -------IVHRDIKGANILRDSAGNVKLGDFG-ASKRLQTICMSGTGIRSVTGTPYWMSP 178

Query: 315 EILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV-PMDPSF- 371
           E++         E + +KAD+++LG  + E+         +E   A +     P +P   
Sbjct: 179 EVISG-------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP 231

Query: 372 --------DDMRKVICIDQQRP 385
                   D +  +    + RP
Sbjct: 232 SHISEHARDFLGCIFVEARHRP 253

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 27/209 (12%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK---IFFSRD-EASWSRETEIYSTVLLRHENILGYIG 197
           IG+G++ EV+R   +  G  VA+K   IF   D +A      EI     L H N++ Y  
Sbjct: 10  IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 69

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           S     N    +  +        +  H    +  +    + K  + + + L H+H+    
Sbjct: 70  S-FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR--- 125

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRDIK  N+ +   G   + D GL   +S  +       +  VGT  YMSPE
Sbjct: 126 -----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA----AHSLVGTPYYMSPE 176

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEV 344
            + E  N   F    K+DI++LG +L+E+
Sbjct: 177 RIHE--NGYNF----KSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 54.2 bits (130), Expect = 5e-08
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 17/139 (12%)

Query: 207 TQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
            +L L+  Y S G ++ HL  R   +  ++      I+  L HLH        K  I +R
Sbjct: 78  AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLH--------KLGIVYR 129

Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
           DIK +NIL+ + G  V+ DFGL+  +     +         GT  YM+PEI+        
Sbjct: 130 DIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTY---SFCGTIEYMAPEIIRGKGGHG- 185

Query: 326 FESFKKADIYALGLVLWEV 344
               K  D ++LG++++E+
Sbjct: 186 ----KAVDWWSLGILIFEL 200

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 53.6 bits (129), Expect = 5e-08
 Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 25/199 (12%)

Query: 152 VWRGVWHGENVAVKIF--FSRDEASWSR--ETEIYSTVLLRHENILGYIGSDMTSRNSCT 207
           +++G+++ + V ++ F  F +         E EI +   +   NIL   G  +   +   
Sbjct: 36  IYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95

Query: 208 QLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L L+  Y + G L + L     L+    + + +    GL +L+        KP   +++
Sbjct: 96  RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT----NKP---YKN 148

Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           + S + LV  N    I   GL          +  PP   V    Y S ++L      D F
Sbjct: 149 LTSVSFLVTENYKLKIICHGL-------EKILSSPPFKNVNFMVYFSYKML-----NDIF 196

Query: 327 ESFK-KADIYALGLVLWEV 344
             +  K DIY+LG+VLWE+
Sbjct: 197 SEYTIKDDIYSLGVVLWEI 215

Length = 283

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 38/189 (20%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK--IFFSRDEA---SWSRETEIYSTVLLRHENILGY- 195
           I +G YG V+R      GE VA+K        E    +  RE  I     L+H NI+   
Sbjct: 13  IEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLK--LQHPNIVTVK 70

Query: 196 ---IGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVH 248
              +GS++       ++++V  Y  H   SL + + +         +M   LS   G+ H
Sbjct: 71  EVVVGSNLD------KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLS---GVAH 121

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH           I HRD+K+ N+L+   G   I DFGLA  Y              V T
Sbjct: 122 LH--------DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY----TQLVVT 169

Query: 309 KRYMSPEIL 317
             Y +PE+L
Sbjct: 170 LWYRAPELL 178

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 53.5 bits (129), Expect = 8e-08
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 41/214 (19%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIF-----FSRDEA-SWSRETEIYSTV-LLRHENILG 194
           +G+G +G+V    +       A+K        +RDE  S   E  I+ T    RH  ++ 
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                 T  + C     V  Y + G L  H++    +  + +     +V GL +LH    
Sbjct: 67  LFACFQTEDHVC----FVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLH---- 118

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKR 310
               +  I +RD+K  N+L+ T G   IADFGL         K  +    R     GT  
Sbjct: 119 ----ENKIVYRDLKLDNLLLDTEGFVKIADFGLC--------KEGMGFGDRTSTFCGTPE 166

Query: 311 YMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           +++PE+L E        S+ +A D + LG++++E
Sbjct: 167 FLAPEVLTE-------TSYTRAVDWWGLGVLIYE 193

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 53.0 bits (127), Expect = 9e-08
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 19/106 (17%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
            + GL  LH           I HRD+K +NILV + G   +ADFGLA  YS       + 
Sbjct: 117 FLRGLDFLHAN--------CIVHRDLKPENILVTSGGQVKLADFGLARIYS-----CQMA 163

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
             P V T  Y +PE+L +S            D++++G +  E+ RR
Sbjct: 164 LTPVVVTLWYRAPEVLLQSTYA------TPVDMWSVGCIFAEMFRR 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 53/228 (23%)

Query: 140 LSECIGKGRYGEVWRGV--WHGENVAVK----IF-FSRDEASWSRETEIYSTVLLRHENI 192
           + E IGKG YG V   +    GE VA+K    +F    D     RE ++    LLRH +I
Sbjct: 4   IQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLR--LLRHPDI 61

Query: 193 LGYIGSDM--TSRNSCTQLWLV-----THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
           +  I   M   SR     +++V     +  H      D L   T  HHQ       ++  
Sbjct: 62  V-EIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDL---TPEHHQFF--LYQLLRA 115

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-VSYSQLSNKMDIPP-- 302
           L ++HT          + HRD+K KNIL   +    I DFGLA V+++      D P   
Sbjct: 116 LKYIHTA--------NVFHRDLKPKNILANADCKLKICDFGLARVAFN------DTPTAI 161

Query: 303 --NPRVGTKRYMSPEILDESINMDCFESFKK----ADIYALGLVLWEV 344
                V T+ Y +PE+        C   F K     DI+++G +  EV
Sbjct: 162 FWTDYVATRWYRAPEL--------CGSFFSKYTPAIDIWSIGCIFAEV 201

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 31/155 (20%)

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           K+ ++IV  L +L         K  + HRD+K  NIL+  +G   + DFG++    +L +
Sbjct: 118 KMTVAIVKALHYLKE-------KHGVIHRDVKPSNILLDASGNVKLCDFGIS---GRLVD 167

Query: 297 KMDIPPNPR-VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE 355
                   R  G   YM+PE +D       ++   +AD+++LG+ L E+     A G F 
Sbjct: 168 SK---AKTRSAGCAAYMAPERIDPPDPNPKYDI--RADVWSLGISLVEL-----ATGQF- 216

Query: 356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR 390
               PY +       F+ + K+  + ++ P LP  
Sbjct: 217 ----PYKN---CKTEFEVLTKI--LQEEPPSLPPN 242

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 53.0 bits (127), Expect = 1e-07
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 27/145 (18%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+ ++NIL+       I DFGLA      SN + +  N R+  K +M+P    ESI  
Sbjct: 237 HRDLAARNILLTHGRITKICDFGLARDIRNDSNYV-VKGNARLPVK-WMAP----ESI-F 289

Query: 324 DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ 383
           +C  +F ++D+++ G++LWE         IF    +PY  + P+D  F  M K    +  
Sbjct: 290 NCVYTF-ESDVWSYGILLWE---------IFSLGSSPYPGM-PVDSKFYKMIK----EGY 334

Query: 384 RPVLPNRWVSDSTLNAMTKVMKECW 408
           R + P    S+     M  +MK CW
Sbjct: 335 RMLSPECAPSE-----MYDIMKSCW 354

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 52.4 bits (125), Expect = 1e-07
 Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 50/234 (21%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENV----AVKIF--FSRDEASWSRETE 180
           +++ T  K++ +   +G G +G V++G+W   GE V    A+KI    +  +A+     E
Sbjct: 3   ILKETELKRVKV---LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 59

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKI 238
                 + H +++  +G  ++       + LVT     G L  Y H ++  +    ++  
Sbjct: 60  ALIMASMDHPHLVRLLGVCLSP-----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW 114

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSY 291
           C+ I  G+++L            + HRD+ ++N+LVK+     I DFGLA         Y
Sbjct: 115 CVQIAKGMMYLEER--------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166

Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
           +    KM I         ++M+ E +        +  F  ++D+++ G+ +WE+
Sbjct: 167 NADGGKMPI---------KWMALECIH-------YRKFTHQSDVWSYGVTIWEL 204

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 43/160 (26%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+  N    I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 196 HRDLAARNILLSENNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPES 246

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D+           ++D+++ G++LWE         IF    +PY   V +D  F    
Sbjct: 247 IFDKVYTT-------QSDVWSFGVLLWE---------IFSLGASPYPG-VQIDEEFCRRL 289

Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           K    +  R   P     +     +  +M +CWH N   R
Sbjct: 290 K----EGTRMRAP-----EYATPEIYSIMLDCWHNNPEDR 320

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 68/297 (22%)

Query: 138 ISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVLLR 188
           I+  + IG G +GEV+RG+      + VAV I      +  +    +  E  I       
Sbjct: 7   ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQ--FS 64

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
           H NI+   G     +       ++T Y   G+L  +L  +    + +Q++ +   I  G+
Sbjct: 65  HHNIIRLEGVVTKFKP----AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGM 120

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNKM 298
            +L    +         HRD+ ++NILV +N  C ++DFGL+         +Y+    K+
Sbjct: 121 KYLSDMNY--------VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKI 172

Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK 358
            I         R+ +P    E+I    F S   +D+++ G+V+WEV         F E  
Sbjct: 173 PI---------RWTAP----EAIAYRKFTS--ASDVWSFGIVMWEVMS-------FGE-- 208

Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            PY D+     S  ++ K I  D  R   P    S     A+ ++M +CW Q+   R
Sbjct: 209 RPYWDM-----SNHEVMKAIN-DGFRLPAPMDCPS-----AVYQLMLQCWQQDRARR 254

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHS--------AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 168 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 213

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 57/236 (24%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
           I   + IG+G +G+V +     + + +     R        D   ++ E E+    L  H
Sbjct: 9   IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 67

Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
            NI+  +G+       C     L+L   Y   G+L D L ++                 T
Sbjct: 68  PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 120

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+  Q++     +  G+ +L  + F         HRD+ ++NILV  N    IADFGL+ 
Sbjct: 121 LSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFGLSR 172

Query: 290 SYSQLSNK-MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                  K M   P       R+M+ E L+ S+          +D+++ G++LWE+
Sbjct: 173 GQEVYVKKTMGRLP------VRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 216

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)

Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A  I + + IG G +GEV  G   +     + V I      +  +    +  E  I    
Sbjct: 3   ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ- 61

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICL 240
              H NI+   G  + ++     + +VT Y   GSL   L +     T +   Q++ +  
Sbjct: 62  -FDHPNIIHLEG--VVTK--SKPVMIVTEYMENGSLDAFLRKHDGQFTVI---QLVGMLR 113

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYS 292
            I +G+ +L              HRD+ ++NILV +N  C ++DFGL+         +Y+
Sbjct: 114 GIASGMKYL--------SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT 165

Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
               K+ I         R+ +PE +        +  F  A D+++ G+V+WEV
Sbjct: 166 TRGGKIPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 20/104 (19%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I++GL HLH        +  I +RD+K +N+L+  +G   I+D GLAV      +K    
Sbjct: 106 IISGLEHLH--------QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT--- 154

Query: 302 PNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEV 344
                GT  +M+PE+L  E  +          D +ALG+ L+E+
Sbjct: 155 -KGYAGTPGFMAPELLQGEEYDF-------SVDYFALGVTLYEM 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 51.4 bits (123), Expect = 3e-07
 Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 84/334 (25%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------------------VAVKIFFSRDEAS--- 174
           K+++  E +G+G++GEV      G                    VAVK+   R++A+   
Sbjct: 5   KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKML--REDANKNA 62

Query: 175 ---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---- 227
              + +E +I S   L+  NI+  +   +TS   C    ++T Y   G L   L+R    
Sbjct: 63  RNDFLKEIKIMSR--LKDPNIIRLLAVCITSDPLC----MITEYMENGDLNQFLSRHEPQ 116

Query: 228 --------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT 279
                    T+++  ++ +   I +G+ +L +  F         HRD+ ++N LV  N T
Sbjct: 117 EAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF--------VHRDLATRNCLVGKNYT 168

Query: 280 CVIADFGLAVS-----YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
             IADFG++ +     Y ++  +  +P        R+MS     ESI +  F +   +D+
Sbjct: 169 IKIADFGMSRNLYSGDYYRIQGRAVLP-------IRWMSW----ESILLGKFTT--ASDV 215

Query: 335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPV-LPNRWVS 393
           +A G+ LWE+    K        + PY  L   D    +       DQ R V LP   + 
Sbjct: 216 WAFGVTLWEILTLCK--------EQPYSQLS--DEQVIENTGEFFRDQGRQVYLPKPALC 265

Query: 394 DSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK 427
             +L    K+M  CW +NA  R S   +  TL++
Sbjct: 266 PDSLY---KLMLSCWRRNAKERPSFQEIHATLLE 296

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 36/187 (19%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           IG+G YG V+  R    G+ VA+K F   ++    ++    EI     L+H N++  I  
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSIVNGL--VHLHTEIF 254
               R    +L LV  Y    ++ + L +    +  H + KI    +  +   H H  I 
Sbjct: 69  FRRKR----KLHLVFEYCDH-TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCI- 122

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKR 310
                    HRD+K +NIL+   G   + DFG A        ++   P       V T+ 
Sbjct: 123 ---------HRDVKPENILITKQGQIKLCDFGFA--------RILTGPGDDYTDYVATRW 165

Query: 311 YMSPEIL 317
           Y +PE+L
Sbjct: 166 YRAPELL 172

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 68/294 (23%)

Query: 142 ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYST-------VLLR- 188
             IGKG +G V+ G     +      AVK        S +R T++          ++++ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVK--------SLNRITDLEEVEQFLKEGIIMKD 52

Query: 189 --HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVN 244
             H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  
Sbjct: 53  FSHPNVLSLLGICLPSEGSPL---VVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAK 109

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L ++ F         HRD+ ++N ++  + T  +ADFGLA     + +K     + 
Sbjct: 110 GMEYLASKKF--------VHRDLAARNCMLDESFTVKVADFGLA---RDIYDKEYYSVHN 158

Query: 305 RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
             G K   ++M+     ES+    F +  K+D+++ G++LWE+  R            PY
Sbjct: 159 HTGAKLPVKWMAL----ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPY 203

Query: 362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            D+   D         + + Q R +L   +  D     + +VM  CWH    +R
Sbjct: 204 PDVDSFD-------ITVYLLQGRRLLQPEYCPDP----LYEVMLSCWHPKPEMR 246

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 36/213 (16%)

Query: 144 IGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVL----LRHENILG 194
           +G G +G V +GV+  ++     VAVK    + E   + + E          L H  I+ 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTL--KQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 195 YIGSDMTSRNSCT--QLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
            IG        C    L LV      G L  +L  R  +    + ++   +  G+ +L +
Sbjct: 61  LIGV-------CKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES 113

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           + F         HRD+ ++N+L+       I+DFG++ +    S+        R   K Y
Sbjct: 114 KHF--------VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY 165

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            +P    E IN   F S  K+D+++ G+ LWE 
Sbjct: 166 -AP----ECINYGKFSS--KSDVWSYGVTLWEA 191

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 42/220 (19%)

Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASW-SRETEIYSTVLL 187
           K   +   +G+G YG+V+  +    GE VA+K       F  +E      E +I +T   
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-- 58

Query: 188 RHENI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVN 244
           + E +  L Y   D         L+L   Y   G     LN    L+          +  
Sbjct: 59  KSEWLVKLLYAFQDDEY------LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFE 112

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
            +  LH        +    HRD+K +N L+  +G   + DFGL+      +N +      
Sbjct: 113 AVDALH--------ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV------ 158

Query: 305 RVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWE 343
            VG+  YM+PE+L  +  +          D ++LG +L+E
Sbjct: 159 -VGSPDYMAPEVLRGKGYDFTV-------DYWSLGCMLYE 190

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
            +  L   Q+  I L I+NGL  LH        K    HRD+   NI + + G C IADF
Sbjct: 112 RKIRLTESQVKCILLQILNGLNVLH--------KWYFMHRDLSPANIFINSKGICKIADF 163

Query: 286 GLAVSY------SQLSNKMDIPPN----PRVGTKRYMSPEIL 317
           GLA  Y        LS    +        +V T  Y +PE+L
Sbjct: 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELL 205

Length = 335

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 51.6 bits (123), Expect = 4e-07
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 19/115 (16%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHS--------AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+
Sbjct: 175 T-AGTSFMMT----PYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEM 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 35/189 (18%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLL---RHENI---L 193
           E IG+G YG V+  R    GE VA+K      E      T I    LL    H NI   L
Sbjct: 5   EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL 64

Query: 194 GYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             + S+        +L+LV  +         D    T L+   +      ++ G+ + H+
Sbjct: 65  DVVHSE-------NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGT 308
                     + HRD+K +N+L+   G   +ADFGLA ++        +P       V T
Sbjct: 118 H--------RVLHRDLKPQNLLIDREGALKLADFGLARAFG-------VPVRTYTHEVVT 162

Query: 309 KRYMSPEIL 317
             Y +PEIL
Sbjct: 163 LWYRAPEIL 171

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 76/318 (23%), Positives = 126/318 (39%), Gaps = 87/318 (27%)

Query: 137 QISLS-----ECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYST 184
           +I+LS     E +G+ R+G+V++G   G       + VA+K    +D+A      E    
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTL--KDKAEGPLREEFKHE 58

Query: 185 VLLR----HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-------------- 226
            ++R    H NI+  +G     +     L ++  Y S   L++ L               
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQ----PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDD 114

Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
              ++TL     + I   I  G+  L +          + H+D+ ++N+LV       I+
Sbjct: 115 KTVKSTLEPADFVHIVTQIAAGMEFLSSH--------HVVHKDLATRNVLVFDKLNVKIS 166

Query: 284 DFGL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYAL 337
           D GL     A  Y +L     +P        R+MSPE I+    ++D       +DI++ 
Sbjct: 167 DLGLFREVYAADYYKLMGNSLLP-------IRWMSPEAIMYGKFSID-------SDIWSY 212

Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTL 397
           G+VLWEV         F     PY      D        VI + + R VLP     D   
Sbjct: 213 GVVLWEV---------FSYGLQPYCGYSNQD--------VIEMIRNRQVLP---CPDDCP 252

Query: 398 NAMTKVMKECWHQNANVR 415
             +  +M ECW++  + R
Sbjct: 253 AWVYTLMLECWNEFPSRR 270

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 36/215 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENILG 194
           +GKG +G+V   R    G+  A+KI       ++DE +    T   S VL   RH     
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVA---HTLTESRVLKNTRHP---- 55

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC-LSIVNGLVHLHTEI 253
           ++ S   S  +  +L  V  Y + G L+ HL+R  +      +     IV+ L +LH+  
Sbjct: 56  FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHS-- 113

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
               GK  I +RD+K +N+++  +G   I DFGL       +  M        GT  Y++
Sbjct: 114 ----GK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM----KTFCGTPEYLA 163

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 164 PEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 31/185 (16%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVKI----FFSRDEASWS-RETEIYSTVLLRHENILGYI 196
           +G G YG+V        G  VA+K     F S   A  + RE  +     + HEN++G +
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLK--HMDHENVIGLL 80

Query: 197 GSDM----TSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
             D+    +S      ++LVTH      L + +    L+   +  +   I+ GL ++H+ 
Sbjct: 81  --DVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHS- 136

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  NI V  +    I DFGLA       ++M       V T+ Y 
Sbjct: 137 -------AGIIHRDLKPSNIAVNEDCELKILDFGLA---RHTDDEM----TGYVATRWYR 182

Query: 313 SPEIL 317
           +PEI+
Sbjct: 183 APEIM 187

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 44/216 (20%)

Query: 142 ECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIG 197
           E +GKG +GEV++G    +  VAVK     D     +   +    +L+   H NI+  IG
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTPVAVKTC-KEDLPQELKIKFLSEARILKQYDHPNIVKLIG 59

Query: 198 SDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSIVNGLVHLHTE 252
                   CTQ   +++V      G     L +    L   Q++K  L    G+ +L   
Sbjct: 60  V-------CTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYL--- 109

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMDIPPNPRVG 307
               + K  I HRD+ ++N LV  N    I+DFG++       YS  S    IP      
Sbjct: 110 ----ESKNCI-HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-SGLKQIP------ 157

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
             ++ +PE L    N   + S  ++D+++ G++LWE
Sbjct: 158 -IKWTAPEAL----NYGRYSS--ESDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 51.0 bits (123), Expect = 5e-07
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 14/85 (16%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP----RVGTKRYMSPEILDE 319
           HRD+K  NIL+ ++    +ADFGLA S S+L    + P NP     V T+ Y +PEIL  
Sbjct: 130 HRDLKPSNILLNSDCRVKLADFGLARSLSELE---ENPENPVLTDYVATRWYRAPEILLG 186

Query: 320 SINMDCFESFKKA-DIYALGLVLWE 343
           S        + K  D++++G +L E
Sbjct: 187 S------TRYTKGVDMWSVGCILGE 205

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 34/216 (15%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65

Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    + +    +      ++ GL   H+   
Sbjct: 66  DVIHTEN----KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-- 119

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 120 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYTHEVVTLWY 166

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 167 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 50.9 bits (122), Expect = 6e-07
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+K  N+LV  +    I DFGLA  +S+   +        V T+ Y +PEI      M
Sbjct: 128 HRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI------M 181

Query: 324 DCFESFKKA-DIYALGLVLWE 343
             F+S+ KA D++++G +L E
Sbjct: 182 LSFQSYTKAIDVWSVGCILAE 202

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 28/164 (17%)

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLS 241
           L H  I+ +  S +     C    ++T Y     L   L        TL+ +Q+ +  + 
Sbjct: 59  LDHPAIVKFHASFLERDAFC----IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQ 114

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           ++ G+ ++H           I HRD+K+KNI +K N    I DFG++     L    D+ 
Sbjct: 115 LLLGVHYMHQR--------RILHRDLKAKNIFLKNN-LLKIGDFGVS---RLLMGSCDL- 161

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                GT  YMSPE L        ++S  K+DI++LG +L+E+C
Sbjct: 162 ATTFTGTPYYMSPEALKHQ----GYDS--KSDIWSLGCILYEMC 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 45/238 (18%)

Query: 144 IGKGRYGEVWRG-VWHGENVAVKIF-------FSRDEASWSRETEIYSTVLLRHENILGY 195
           IG G +G+V    ++    VA  +         S+++  + ++ + Y   +L+H NIL  
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYR--ILQHPNILQC 60

Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLV 247
           +G        C +     LV  Y   G L  +L     +R       + ++   I  G+ 
Sbjct: 61  LGQ-------CVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVT 113

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           H+H   F         H D+  +N  + ++ T  + D+G  +  S+         + +  
Sbjct: 114 HMHKHNF--------LHSDLALRNCFLTSDLTVKVGDYG--IGPSRYKEDYIETEDDKCV 163

Query: 308 TKRYMSPEILDE-SINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
             R+++PE++ E    +   E  K ++++ALG+ LWE         +FE    PY  L
Sbjct: 164 PLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWE---------LFENAAQPYSHL 212

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 50.4 bits (121), Expect = 8e-07
 Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 53/226 (23%)

Query: 143 CIGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWSRET--EIYSTVLLRHENILG 194
            IG+G YG V         E VA+K     F +R +A   + T  EI     L HEN++ 
Sbjct: 12  PIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDA---KRTLREIKLLRHLDHENVIA 68

Query: 195 YIGSDM-TSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------------ICLS 241
                    R +   +++V         Y+ L  T L  HQ+++                
Sbjct: 69  IKDIMPPPHREAFNDVYIV---------YE-LMDTDL--HQIIRSSQTLSDDHCQYFLYQ 116

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           ++ GL ++H+          + HRD+K  N+L+  N    I DFGLA + S+  + M   
Sbjct: 117 LLRGLKYIHS--------ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFM--- 165

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
               V T+ Y +PE+L     ++C E     D++++G +  E+  R
Sbjct: 166 -TEYVVTRWYRAPELL-----LNCSEYTTAIDVWSVGCIFAELLGR 205

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 50.4 bits (121), Expect = 8e-07
 Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 31/190 (16%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK-IFFSRDEASWSRET--EIYSTVLLRHENILGYI 196
           E IG G YG V   +    G+ VA+K I  + D  + ++ T  E+      +H+NI+   
Sbjct: 11  ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIR 70

Query: 197 GSDMTSRNSCTQLWLVT-------HY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV 247
                       +++V        H+  HS   L +   R  L  +Q+++       GL 
Sbjct: 71  DILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFL--YQLLR-------GLK 121

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           ++H+          + HRD+K  N+LV  +    I DFG+A   S    +        V 
Sbjct: 122 YIHSA--------NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA 173

Query: 308 TKRYMSPEIL 317
           T+ Y +PE+L
Sbjct: 174 TRWYRAPELL 183

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 50.3 bits (120), Expect = 9e-07
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 26/160 (16%)

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN 244
           + H +++     D     + T + L  HY S   LY +L +    L   Q + I   I+ 
Sbjct: 114 VNHPSVIRM--KDTLVSGAITCMVL-PHYSS--DLYTYLTKRSRPLPIDQALIIEKQILE 168

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL +LH +         I HRD+K++NI +       I D G A         + +    
Sbjct: 169 GLRYLHAQ--------RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL---- 216

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             GT    +PE+L      D + S  KADI++ G+VL+E+
Sbjct: 217 -AGTVETNAPEVLAR----DKYNS--KADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 67/259 (25%), Positives = 98/259 (37%), Gaps = 61/259 (23%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWSRE-TEIYSTVLLRHENILGYI 196
           IG G +G VW       G+ VA+K    +F  ++  S  R   E+      +H+N+L  +
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKMPNVF--QNLVSCKRVFRELKMLCFFKHDNVLSAL 65

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS--------------- 241
                      +   V               T L    + KI +S               
Sbjct: 66  DILQPPHIDPFEEIYVV--------------TELMQSDLHKIIVSPQPLSSDHVKVFLYQ 111

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-VSYSQLSNKMDI 300
           I+ GL +LH+          I HRDIK  N+LV +N    I DFGLA V     S  M  
Sbjct: 112 ILRGLKYLHS--------AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHM-- 161

Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT---KANGIFEEY 357
                V T+ Y +PEIL     M         DI+++G +  E+  R    +A    ++ 
Sbjct: 162 --TQEVVTQYYRAPEIL-----MGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL 214

Query: 358 KAPYHDLVPMDPSFDDMRK 376
                DL+   PS + MR 
Sbjct: 215 DLIT-DLL-GTPSLEAMRS 231

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 29/108 (26%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I  GL  LH E         I +RD+K +NIL+   G   I+D GLAV         +IP
Sbjct: 111 ITCGLEDLHRE--------RIVYRDLKPENILLDDYGHIRISDLGLAV---------EIP 153

Query: 302 PNP----RVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
                  RVGT  YM+PE++         E +    D + LG +++E+
Sbjct: 154 EGETIRGRVGTVGYMAPEVVKN-------ERYTFSPDWWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 48/229 (20%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           E IG+G YG+V+  R    G+ VA+K      +     + E      LR  ++L  +   
Sbjct: 7   EKIGEGTYGKVYKARDKNTGKLVALK------KTRLEMDEEGIPPTALREISLLQMLSES 60

Query: 200 -----------MTSRNSCTQLWLVTHY-----HSFGSLYDHLNRTTLNHHQMMKICLSIV 243
                      +  +N    L+LV  Y       F           L    +      ++
Sbjct: 61  IYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLL 120

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPP 302
            G+ H H        K  + HRD+K +N+LV K  G   IAD GL  ++S       IP 
Sbjct: 121 KGVAHCH--------KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS-------IPV 165

Query: 303 NP---RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                 + T  Y +PE+L  S +          DI+++G +  E+ R+ 
Sbjct: 166 KSYTHEIVTLWYRAPEVLLGSTHYS-----TPVDIWSVGCIFAEMSRKQ 209

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 66/301 (21%)

Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           E IG+G +GEV+ G    +N  V +   R+      +A + +E  I       H NI+  
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ--YSHPNIVRL 58

Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLH 250
           IG        CTQ   +++V      G     L      L   +++++  +   G+ +L 
Sbjct: 59  IGV-------CTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYL- 110

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMDIPPNPR 305
                 + K  I HRD+ ++N LV       I+DFG++       Y+       IP    
Sbjct: 111 ------ESKHCI-HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP---- 159

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
               ++ +PE L    N   + S  ++D+++ G++LWE          F     PY +L 
Sbjct: 160 ---VKWTAPEAL----NYGRYSS--ESDVWSFGILLWEA---------FSLGAVPYANL- 200

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
               S    R+ I   +Q   LP     +   +A+ ++M+ CW  +   R S   V + L
Sbjct: 201 ----SNQQTREAI---EQGVRLP---CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Query: 426 I 426
            
Sbjct: 251 Q 251

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 27/145 (18%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+ ++N+L+       I DFGLA      SN + +  N R+  K +M+P    ESI  
Sbjct: 235 HRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV-VKGNARLPVK-WMAP----ESI-F 287

Query: 324 DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ 383
           DC  +  ++D+++ G++LWE         IF   K+PY  ++ ++  F  M K       
Sbjct: 288 DCVYTV-QSDVWSYGILLWE---------IFSLGKSPYPGIL-VNSKFYKMVKR-GYQMS 335

Query: 384 RPVLPNRWVSDSTLNAMTKVMKECW 408
           RP        D     +  +MK CW
Sbjct: 336 RP--------DFAPPEIYSIMKMCW 352

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 55/242 (22%)

Query: 136 KQISLSECIGKGRYGEV----------WRGVWHGEN------VAVKIFFSRDEASWSRE- 178
           +Q+ L E +G+G++GEV          + G    E       VAVK+  + D    +R  
Sbjct: 5   QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRA-DVTKTARND 63

Query: 179 --TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNH 232
              EI     L++ NI+  +G  ++    C    ++T Y   G L   L+     +T  H
Sbjct: 64  FLKEIKIMSRLKNPNIIRLLGVCVSDDPLC----MITEYMENGDLNQFLSQREIESTFTH 119

Query: 233 HQMMKICLSIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGL 287
              +   +SI N L+++  +I    G   +A     HRD+ ++N LV  + T  IADFG+
Sbjct: 120 ANNIP-SVSIAN-LLYMAVQI--ASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGM 175

Query: 288 AVS-----YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           + +     Y ++  +  +P        R+M+     ESI +  F +   +D++A G+ LW
Sbjct: 176 SRNLYSGDYYRIQGRAVLP-------IRWMAW----ESILLGKFTT--ASDVWAFGVTLW 222

Query: 343 EV 344
           E+
Sbjct: 223 EM 224

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENILG 194
           +GKG +G+V   R    G+  A+KI       ++DE +    T   S VL   RH     
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVA---HTLTESRVLQNTRHP---- 55

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEI 253
           ++ +   S  +  +L  V  Y + G L+ HL+R    +  +       IV+ L +LH+  
Sbjct: 56  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC- 114

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   + +RD+K +N+++  +G   I DFGL          M        GT  Y++
Sbjct: 115 -------DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEYLA 163

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 164 PEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 68/313 (21%), Positives = 119/313 (38%), Gaps = 79/313 (25%)

Query: 144 IGKGRYGEVWRG-------VWHGE-NVAVKIFFSRDEASWSRETEIYSTVLL----RHEN 191
           +G G +GEV+ G          G   VAVK    R  A+   + E      L     H N
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTL--RKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--------LNHHQMMKICLSIV 243
           I+  +G  + +       +++      G L  +L            L   +++ ICL + 
Sbjct: 61  IVKLLGVCLLNE----PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVA 116

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-----TCVIADFGLA-----VSYSQ 293
            G V+L    F         HRD+ ++N LV   G        I DFGLA       Y +
Sbjct: 117 KGCVYLEQMHF--------IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR 168

Query: 294 LSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
              +  +P        R+M+PE +LD            ++D+++ G+++WE         
Sbjct: 169 KEGEGLLP-------VRWMAPESLLDGKFTT-------QSDVWSFGVLMWE--------- 205

Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
           I    + PY    P   + + ++ V    + +   P           + ++M  CW Q+ 
Sbjct: 206 ILTLGQQPY----PALNNQEVLQHVTAGGRLQK--PENCPDK-----IYQLMTNCWAQDP 254

Query: 413 NVRLSALRVKKTL 425
           + R +  R+++ L
Sbjct: 255 SERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)

Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC-LSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L  V  Y + G L+ HL+R  +      +     IV+ L +LH+E         + +RD
Sbjct: 69  RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-------KNVVYRD 121

Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +N+++  +G   I DFGL     +    M        GT  Y++PE+L+++      
Sbjct: 122 LKLENLMLDKDGHIKITDFGLCKEGIKDGATM----KTFCGTPEYLAPEVLEDN------ 171

Query: 327 ESFKKADIYALGLVLWE-VCRR 347
           +  +  D + LG+V++E +C R
Sbjct: 172 DYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 54/220 (24%)

Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           +GKG +G+V      G +   AVK+         D+   +  E  + +    +H      
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-KHPF---- 57

Query: 196 IGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVH 248
               +T  +SC Q    L+ V  Y + G L  H+ R+        +       IV GL  
Sbjct: 58  ----LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAE--IVLGLQF 111

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV-- 306
           LH        +  I +RD+K  N+L+ + G   IADFG+         K  I        
Sbjct: 112 LH--------ERGIIYRDLKLDNVLLDSEGHIKIADFGMC--------KEGILGGVTTST 155

Query: 307 --GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
             GT  Y++PEIL         + +  A D +ALG++L+E
Sbjct: 156 FCGTPDYIAPEILSY-------QPYGPAVDWWALGVLLYE 188

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 65/313 (20%), Positives = 131/313 (41%), Gaps = 74/313 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLR 188
           ++I++S  +G+G +G V+ G+  G         VA+K     + AS     E  +   + 
Sbjct: 6   EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 63

Query: 189 HE----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH--------- 233
            E    +++  +G     + +   + L+T     G L  +L   R  + ++         
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVQAPPSLK 119

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 120 KMIQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 171

Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+    
Sbjct: 172 TDYYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA 218

Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
                    + PY  +           +V+    +  +L      D+  + + ++M+ CW
Sbjct: 219 ---------EQPYQGM--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCW 258

Query: 409 HQNANVRLSALRV 421
             N  +R S L +
Sbjct: 259 QYNPKMRPSFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 40/214 (18%)

Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYS--TVLL---RHENILGYI 196
           IGKG +G+V       +    AVK+   +       +  I +   VLL   +H  ++G  
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFG 255
            S  T+     +L+ V  Y + G L+ HL R         +     + + + +LH+    
Sbjct: 63  YSFQTAE----KLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL--- 115

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRY 311
                 I +RD+K +NIL+ + G  V+ DFGL         K  + P        GT  Y
Sbjct: 116 -----NIIYRDLKPENILLDSQGHVVLTDFGLC--------KEGVEPEETTSTFCGTPEY 162

Query: 312 MSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           ++PE+L +       E + +  D + LG VL+E+
Sbjct: 163 LAPEVLRK-------EPYDRTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 32/214 (14%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           Q ++   +  G  GEV+    HG+    K+         +   EI     + H  I+  I
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLI 152

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFG 255
            +    R   T   ++  Y     L+ +++R+  L   Q + I   ++  L +LH     
Sbjct: 153 HA---YRWKSTVCMVMPKYKC--DLFTYVDRSGPLPLEQAITIQRRLLEALAYLH----- 202

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN-PR----VGTKR 310
             G+  I HRD+K++NI +      V+ DFG A        K+D  P+ P+     GT  
Sbjct: 203 --GR-GIIHRDVKTENIFLDEPENAVLGDFGAAC-------KLDAHPDTPQCYGWSGTLE 252

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             SPE+L  +++  C     K DI++ GLVL+E+
Sbjct: 253 TNSPELL--ALDPYC----AKTDIWSAGLVLFEM 280

Length = 392

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 19/119 (15%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 115 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 166

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           +    S  M     P V T+ Y +PE++   + M   E     DI+++G ++ E+ R T
Sbjct: 167 TAGT-SFMM----TPYVVTRYYRAPEVI---LGMGYKE---NVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 31/216 (14%)

Query: 144 IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILG 194
           IG+G YG+V++       G  VA+K    +        + I    +LR      H N++ 
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 195 YIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
                  SR +  T+L LV  +      +  D +    +    +  +   ++ GL  LH+
Sbjct: 69  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 128

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + HRD+K +NILV ++G   +ADFGLA  YS       +     V T  Y
Sbjct: 129 H--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTLWY 175

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PE+L +S            D++++G +  E+ RR
Sbjct: 176 RAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 205

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 21/104 (20%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I  GL  LH E         I +RD+K +NIL+  +G   I+D GLAV   +        
Sbjct: 111 ICCGLEDLHQE--------RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-----GQT 157

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
              RVGT  YM+PE++         E +    D +ALG +L+E+
Sbjct: 158 IKGRVGTVGYMAPEVVKN-------ERYTFSPDWWALGCLLYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.9 bits (115), Expect = 4e-06
 Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 56/219 (25%)

Query: 144 IGKGRYGEVWRGVWHGEN---VAVKIFFSRD------EASWSRETEIYSTVLLRHENILG 194
           +G G +G V   V H  +    A+KI                 E  I  ++  RH  ++ 
Sbjct: 9   LGTGSFGRVML-VRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI--RHPFLVN 65

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEI 253
             GS     N    L+LV  Y   G L+ HL ++      + +   + +V  L +LH+  
Sbjct: 66  LYGSFQDDSN----LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL- 120

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV------- 306
                   I +RD+K +N+L+ ++G   I DFG A                RV       
Sbjct: 121 -------DIVYRDLKPENLLLDSDGYIKITDFGFAK---------------RVKGRTYTL 158

Query: 307 -GTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWE 343
            GT  Y++PE IL +          K  D +ALG++++E
Sbjct: 159 CGTPEYLAPEIILSKGYG-------KAVDWWALGILIYE 190

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK----IFFSRDEASWSRETEIYSTVLLR----HENIL 193
           IG+G + EV +      G+  A+K     F S ++ +  RE +      LR    H NIL
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQ-----ALRRLSPHPNIL 61

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
             I  ++       +L LV       +LY+ +   +  L   ++      ++  L H+H 
Sbjct: 62  RLI--EVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH- 117

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-YSQLSNKMDIPPNPRVGTKR 310
                  +  I HRDIK +NIL+K +    +ADFG     YS+       P    + T+ 
Sbjct: 118 -------RNGIFHRDIKPENILIKDD-ILKLADFGSCRGIYSKP------PYTEYISTRW 163

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           Y +PE L      D +    K DI+A+G V +E+
Sbjct: 164 YRAPECL----LTDGYYGP-KMDIWAVGCVFFEI 192

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENILG 194
           +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +  
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFLTA 59

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC-LSIVNGLVHLHTEI 253
              +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+  
Sbjct: 60  LKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 114

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   + +RDIK +N+++  +G   I DFGL      +S+   +      GT  Y++
Sbjct: 115 -------DVVYRDIKLENLMLDKDGHIKITDFGLC--KEGISDGATM--KTFCGTPEYLA 163

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 164 PEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.3 bits (112), Expect = 9e-06
 Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 36/212 (16%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83

Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
             +   S      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 84  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 138

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 139 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 184

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 185 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 211

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.9 bits (111), Expect = 9e-06
 Identities = 73/337 (21%), Positives = 132/337 (39%), Gaps = 96/337 (28%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
            + L + +G+G +G+V +              VAVK+   ++ AS S   ++ S   L  
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKML--KENASSSELRDLLSEFNLLK 58

Query: 188 --RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----------------- 225
              H +++   G+       C+Q   L L+  Y  +GSL   L                 
Sbjct: 59  QVNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNR 111

Query: 226 NRTTLNHHQM----MKICLS----IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
           N + L++       M   +S    I  G+ +L         +  + HRD+ ++N+LV   
Sbjct: 112 NSSYLDNPDERALTMGDLISFAWQISRGMQYL--------AEMKLVHRDLAARNVLVAEG 163

Query: 278 GTCVIADFGLAV------SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKK 331
               I+DFGL+       SY + S         R+  K +M+ E L + I         +
Sbjct: 164 RKMKISDFGLSRDVYEEDSYVKRSKG-------RIPVK-WMAIESLFDHIYT------TQ 209

Query: 332 ADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRW 391
           +D+++ G++LWE         I      PY  + P +  F+ ++    ++  RP      
Sbjct: 210 SDVWSFGVLLWE---------IVTLGGNPYPGIAP-ERLFNLLKTGYRME--RP------ 251

Query: 392 VSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             ++    M  +M  CW Q  + R +   + K L K+
Sbjct: 252 --ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 43/160 (26%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+  N    I DFGLA          DI  +P   R G+ R    +M+PE 
Sbjct: 197 HRDLAARNILLSENNVVKICDFGLA---------RDIYKDPDYVRKGSARLPLKWMAPES 247

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D+           ++D+++ G++LWE         IF    +PY   V ++  F    
Sbjct: 248 IFDKVYT-------TQSDVWSFGVLLWE---------IFSLGASPYPG-VQINEEFCQRL 290

Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           K    D  R   P     ++    + ++M  CW  +   R
Sbjct: 291 K----DGTRMRAP-----ENATPEIYRIMLACWQGDPKER 321

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 72/230 (31%)

Query: 144 IGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL-----GYIGS 198
           IGKG +G              K+  ++ +A    + + Y+  +L+ + IL      +I  
Sbjct: 3   IGKGSFG--------------KVLLAKHKA----DGKFYAVKVLQKKAILKKKEQKHI-- 42

Query: 199 DMTSRN----SCTQLWLVTHYHSFGS---LY---DHLNRTTLNHHQMMKICLS------- 241
            M  RN    +    +LV  ++SF +   LY   D++N   L  H   +           
Sbjct: 43  -MAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFY 101

Query: 242 ---IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
              I + L +LH+          I +RD+K +NIL+ + G  V+ DFGL         K 
Sbjct: 102 AAEIASALGYLHSL--------NIIYRDLKPENILLDSQGHVVLTDFGLC--------KE 145

Query: 299 DIPPNPRV----GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            I  +       GT  Y++PE+L +          +  D + LG VL+E+
Sbjct: 146 GIEHSKTTSTFCGTPEYLAPEVLRKQ------PYDRTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 60/204 (29%)

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 120 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 171

Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 172 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTTS--SDMWSFGVVLWEI---- 214

Query: 349 KANGIFEEYKAPYHDL-------VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMT 401
               + E+   PY  L         MD  + D          +P        D+    +T
Sbjct: 215 --TSLAEQ---PYQGLSNEQVLKFVMDGGYLD----------QP--------DNCPERVT 251

Query: 402 KVMKECWHQNANVRLSALRVKKTL 425
            +M+ CW  N  +R + L +   L
Sbjct: 252 DLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 29/108 (26%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I+ GL  LH E           +RD+K +NIL+   G   I+D GLAV          IP
Sbjct: 111 ILCGLEDLHRE--------NTVYRDLKPENILLDDYGHIRISDLGLAVK---------IP 153

Query: 302 PNP----RVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
                  RVGT  YM+PE+L+        + +    D + LG +++E+
Sbjct: 154 EGESIRGRVGTVGYMAPEVLNN-------QRYTLSPDYWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 43/160 (26%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+  N    I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 202 HRDLAARNILLSENNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 252

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D    +       ++D+++ G++LWE         IF    +PY   V +D  F    
Sbjct: 253 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEFCRRL 295

Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           K    +  R   P     D T   M + M +CWH   + R
Sbjct: 296 K----EGTRMRAP-----DYTTPEMYQTMLDCWHGEPSQR 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 62/201 (30%)

Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK 237
           E EI +T  L H  +     S  T    C    LV  Y   G L+  L R      Q  K
Sbjct: 51  EQEILAT--LDHPFLPTLYASFQTETYLC----LVMDYCPGGELFRLLQR------QPGK 98

Query: 238 ICLS----------IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
            CLS          ++  L +LH           I +RD+K +NIL+  +G  +++DF L
Sbjct: 99  -CLSEEVARFYAAEVLLALEYLHLL--------GIVYRDLKPENILLHESGHIMLSDFDL 149

Query: 288 AV-----------SYSQLSNKMDI----------PPNPR----VGTKRYMSPEILDESIN 322
           +            +  + S +  +           P+ R    VGT+ Y++PE+    I+
Sbjct: 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEV----IS 205

Query: 323 MDCFESFKKADIYALGLVLWE 343
            D   S    D + LG++L+E
Sbjct: 206 GDGHGS--AVDWWTLGILLYE 224

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 33/106 (31%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLA---------VSYSQLSNKMDIPPNPR--------- 305
           HRDIK  NIL+  +G   +ADFGL            Y   S+ +    N           
Sbjct: 124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQR 183

Query: 306 -------VGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWE 343
                  VGT  Y++PE+L      ++C       D ++LG++L+E
Sbjct: 184 RVRANSTVGTPDYIAPEVLRGTPYGLEC-------DWWSLGVILYE 222

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 18/86 (20%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-----VGTKRYMSPEILD 318
           HRD+K  N+L+ TN    I DFGLA              +       V T+ Y +PEI  
Sbjct: 129 HRDLKPSNLLLNTNCDLKICDFGLARIADPEH------DHTGFLTEYVATRWYRAPEI-- 180

Query: 319 ESINMDCFESFKKA-DIYALGLVLWE 343
               M   + + KA DI+++G +L E
Sbjct: 181 ----MLNSKGYTKAIDIWSVGCILAE 202

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)

Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
           +T  +SC Q    L+ V  Y + G L  H+ +       Q +     I  GL  LH    
Sbjct: 63  LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLH---- 118

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD-IPPNPRVGTKRYMS 313
               +  I +RD+K  N+++ + G   IADFG+        + +D +      GT  Y++
Sbjct: 119 ----RRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-----EHMVDGVTTRTFCGTPDYIA 169

Query: 314 PEILDESINMDCFESF-KKADIYALGLVLWEV 344
           PEI+        ++ + K  D +A G++L+E+
Sbjct: 170 PEII-------AYQPYGKSVDWWAYGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 38/196 (19%)

Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD----HLNRTTLNHH 233
           + E++ + L  H NI+ Y  + +       +LW+VT + ++GS  D    H     ++  
Sbjct: 47  QGELHVSKLFNHPNIVPYRATFIAD----NELWVVTSFMAYGSAKDLICTHFM-DGMSEL 101

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
            +  I   ++  L ++H             HR +K+ +IL+  +G   ++  GL  + S 
Sbjct: 102 AIAYILQGVLKALDYIH--------HMGYVHRSVKASHILISVDGKVYLS--GLRSNLSM 151

Query: 294 LSNKMDIP-----PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           +++   +      P   V    ++SPE+L +  N+  +++  K+DIY++G+   E+    
Sbjct: 152 INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQ--NLQGYDA--KSDIYSVGITACEL---- 203

Query: 349 KANGIFEEYKAPYHDL 364
            ANG       P+ D+
Sbjct: 204 -ANG-----HVPFKDM 213

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 27/110 (24%)

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
               +V    +LH      +G   I +RD+K +N+L+ +NG   + DFG A    +L + 
Sbjct: 98  YIACVVLAFEYLHN-----RG---IIYRDLKPENLLLDSNGYVKLVDFGFA---KKLKSG 146

Query: 298 MDIPPNPR----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
                  +     GT  Y++PEI+  +   D        D ++LG++L+E
Sbjct: 147 ------QKTWTFCGTPEYVAPEII-LNKGYDFS-----VDYWSLGILLYE 184

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 30/211 (14%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V         + VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKL-SRPFQSLIHARRTYRELRLLKHMKHENVIGLLD 81

Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +  TS  +  +++LVT+      L + +    L+   +  +   ++ GL ++H+    
Sbjct: 82  VFTPATSIENFNEVYLVTNLMG-ADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS---- 136

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA    Q  ++M       V T+ Y +PE
Sbjct: 137 ----AGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADDEM----TGYVATRWYRAPE 185

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCR 346
           I+     ++     +  DI+++G ++ E+ +
Sbjct: 186 IM-----LNWMHYNQTVDIWSVGCIMAELLK 211

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
           HRDIK  N+L+  NG   +ADFG   S  +L     +  N  VGT  Y+SPEIL
Sbjct: 125 HRDIKPDNVLLDKNGHIRLADFG---SCLRLLADGTVQSNVAVGTPDYISPEIL 175

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 36/212 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYS--TVLLR---HENILGYI 196
           IGKG +G+V   +    G+  AVK+   +   +   +  I +   VLL+   H  ++G  
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFG 255
            S  T+     +L+ V  + + G L+ HL R  +    +       I + L +LH+    
Sbjct: 63  YSFQTTE----KLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS---- 114

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIPPNPRVGTKRYM 312
                 I +RD+K +NIL+ + G  V+ DFGL    ++ S  +           GT  Y+
Sbjct: 115 ----INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF-------CGTPEYL 163

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PE++ +             D + LG VL+E+
Sbjct: 164 APEVIRKQ------PYDNTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 31/209 (14%)

Query: 144 IGKGRYGEVWR-------GVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           IGKG +G+V +        ++  + +      SR E +    T    TVL +      +I
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVT---HTLAERTVLAQVNC--PFI 55

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFG 255
                S  S  +L+LV  + + G L+ HL R    +  +       ++  L +LH     
Sbjct: 56  VPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLH----- 110

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
              K  + +RD+K +NIL+   G   + DFGL     +L+ K D   N   GT  Y++PE
Sbjct: 111 ---KFNVIYRDLKPENILLDYQGHIALCDFGLC----KLNMKDDDKTNTFCGTPEYLAPE 163

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEV 344
           +L               D + LG++L+E+
Sbjct: 164 LLLGHGYTKA------VDWWTLGVLLYEM 186

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 44/226 (19%)

Query: 135 AKQISLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVL----L 187
            K I +   +G GR+GE+ RG         + V I   R   S  +     +  L     
Sbjct: 4   NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF 63

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNG 245
            H NI+   G  +T  N+   + +VT Y S G+L   L +    L   Q+M +   + +G
Sbjct: 64  DHSNIVRLEGV-ITRGNT---MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASG 119

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG------LAVSYSQLSNKMD 299
           + +L +E+          H+ + +  +LV ++  C I+ F           Y+ +S K  
Sbjct: 120 MKYL-SEM-------GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSP 171

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +          + +PE +        +  F  A D+++ G+V+WEV
Sbjct: 172 V---------LWAAPEAIQ-------YHHFSSASDVWSFGIVMWEV 201

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 26/180 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G G +G V   R    G+NVA+K     FS    +     E+     LRHENI+     
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            ++       ++ VT       L+  L    L    +      I+ GL ++H+       
Sbjct: 78  FISPL---EDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHS------- 126

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA-VSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
              + HRD+K  NIL+  N    I DFGLA +   Q++          V T+ Y +PEI+
Sbjct: 127 -AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG--------YVSTRYYRAPEIM 177

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 72/287 (25%)

Query: 162 VAVKIFFSRDEAS------WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY 215
           VAVKI   R +A+      + +E +I S   L+  NI+  +G  +     C    ++T Y
Sbjct: 49  VAVKIL--RPDANKNARNDFLKEVKILSR--LKDPNIIRLLGVCVDEDPLC----MITEY 100

Query: 216 HSFGSLYDHLNR--------------------TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              G L   L+                       +++  ++ + L I +G+ +L +  F 
Sbjct: 101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF- 159

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-----AVSYSQLSNKMDIPPNPRVGTKR 310
                   HRD+ ++N LV  N T  IADFG+     A  Y ++  +  +P        R
Sbjct: 160 -------VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLP-------IR 205

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           +M+     E I M  F +   +D++A G+ LWE+    K          PY +L   D  
Sbjct: 206 WMAW----ECILMGKFTT--ASDVWAFGVTLWEILMLCKEQ--------PYGELT--DEQ 249

Query: 371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             +       DQ R V   R         + ++M +CW ++   R S
Sbjct: 250 VIENAGEFFRDQGRQVYLFR--PPPCPQGLYELMLQCWSRDCRERPS 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRDIK  N+L+  NG   +ADFG   S  +++    +  +  VGT  Y+SPEIL +++  
Sbjct: 125 HRDIKPDNVLLDMNGHIRLADFG---SCLKMNQDGTVQSSVAVGTPDYISPEIL-QAMED 180

Query: 324 DCFESFKKADIYALGLVLWEV 344
              +   + D ++LG+ ++E+
Sbjct: 181 GMGKYGPECDWWSLGVCMYEM 201

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 34/212 (16%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGY 195
           E +G+G Y  V++G+   +G+ VA+K+   + E     +  RE  +     L+H NI+  
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG--LKHANIV-L 67

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           +   + ++ + T  ++  + H+  + Y   +   L+ + +      ++ GL ++H +   
Sbjct: 68  LHDIIHTKETLT--FVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ--- 122

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP---NPRVGTKRYM 312
                 I HRD+K +N+L+   G   +ADFGLA + S       IP    +  V T  Y 
Sbjct: 123 -----HILHRDLKPQNLLISYLGELKLADFGLARAKS-------IPSQTYSSEVVTLWYR 170

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
            P++L     +   +     DI+  G +  E+
Sbjct: 171 PPDVL-----LGATDYSSALDIWGAGCIFIEM 197

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 26/208 (12%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           + E +G G +G V R   H   GE  A+K    R+     +   +     +  E    +I
Sbjct: 22  MGETLGTGSFGRV-RIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI 80

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFG 255
            + M S     +++ +  +   G L+ HL +     + + K     +V    +LH++   
Sbjct: 81  VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK--- 137

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE
Sbjct: 138 -----DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTL-------CGTPEYLAPE 185

Query: 316 ILDESINMDCFESFKKADIYALGLVLWE 343
           ++ +S         K  D + +G++L+E
Sbjct: 186 VI-QSKGHG-----KAVDWWTMGVLLYE 207

Length = 329

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 32/188 (17%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYI 196
           E IG+G YG V++       E +A+K      E      T I    LL   +H NI+   
Sbjct: 8   EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL- 66

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICL-SIVNGLVHLHTEI 253
             D+        L+LV  Y     L  H++ +     + +++K  L  I+ G+ + H+  
Sbjct: 67  -QDVVHSEKR--LYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH- 121

Query: 254 FGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTK 309
                   + HRD+K +N+L+ +      +ADFGLA ++        IP       V T 
Sbjct: 122 -------RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG-------IPVRTFTHEVVTL 167

Query: 310 RYMSPEIL 317
            Y +PEIL
Sbjct: 168 WYRAPEIL 175

Length = 294

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 44.5 bits (105), Expect = 6e-05
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)

Query: 262 IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEIL 317
           + +RD+K  NIL+   G C +ADFG+         K  I          GT  Y++PEIL
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFGMC--------KEGILNGVTTTTFCGTPDYIAPEIL 168

Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
            E       E     D +ALG++++E+
Sbjct: 169 QE------LEYGPSVDWWALGVLMYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 8e-05
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 48/260 (18%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYS--TVL--LRHENILGYIG 197
           +G G +G V   R        A+K+    +     +E  +++   VL  + H  I+    
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFW 68

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           ++   R     L+++  Y   G L+ +L N    ++   +     IV  L +LH++    
Sbjct: 69  TEHDQRF----LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---- 120

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I +RD+K +NIL+   G   + DFG A      +  +        GT  Y++PE+
Sbjct: 121 ----EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL-------CGTPEYLAPEV 169

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVC------RRTKANGIFEEYKA-----PYHDLV 365
           + +S   +     K  D +ALG++++E+             GI+E+  A     P H   
Sbjct: 170 I-QSKGHN-----KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH--- 220

Query: 366 PMDPSFDDM-RKVICIDQQR 384
            +D    D+ +K++ +D+ R
Sbjct: 221 -LDLYAKDLIKKLLVVDRTR 239

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRDIK  NIL+  NG   +ADFG   S  +L     +  +  VGT  Y+SPEIL +++  
Sbjct: 125 HRDIKPDNILMDMNGHIRLADFG---SCLKLMEDGTVQSSVAVGTPDYISPEIL-QAMED 180

Query: 324 DCFESFKKADIYALGLVLWEV 344
              +   + D ++LG+ ++E+
Sbjct: 181 GKGKYGPECDWWSLGVCMYEM 201

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 35/168 (20%)

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
           ++ I  S++  + +LH           I HRDIK++NI +   G   + DFG A      
Sbjct: 184 ILAIERSVLRAIQYLHEN--------RIIHRDIKAENIFINHPGDVCLGDFGAACF---- 231

Query: 295 SNKMDIPPNPR---VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKA 350
              +DI  N      GT    +PE+L         + +  A DI++ G+VL+E+   T  
Sbjct: 232 --PVDINANKYYGWAGTIATNAPELLAR-------DPYGPAVDIWSAGIVLFEMA--TCH 280

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           + +FE+          +D   D  R++  I ++    PN +  D+  N
Sbjct: 281 DSLFEKDG--------LDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320

Length = 391

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 30/209 (14%)

Query: 144 IGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           +G G +G V +G++      + VAVKI  + +     ++       LLR  N++  + + 
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDE------LLREANVMQQLDNP 56

Query: 200 MTSRN----SCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
              R           LV      G L   L +   +    + ++   +  G+ +L    F
Sbjct: 57  YIVRMIGICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRD+ ++N+L+ T     I+DFGL+ +     N      + +   K Y +P
Sbjct: 117 --------VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWY-AP 167

Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
               E +N   F S  K+D+++ G+++WE
Sbjct: 168 ----ECMNYYKFSS--KSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%)

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
           K  I HRDIK +N+L+  N    + DFG A     LS   +      V T+ Y SPE+L 
Sbjct: 118 KNDIVHRDIKPENLLISHNDVLKLCDFGFA---RNLSEGSNANYTEYVATRWYRSPELLL 174

Query: 319 ESINMDCFESFKKADIYALGLVLWEV 344
            +         K  D++++G +L E+
Sbjct: 175 GA------PYGKAVDMWSVGCILGEL 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)

Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
           +GKG +G+V      G  E  A+KI   +D      + E      +  + +L   G    
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKIL-KKDVVIQDDDVE----CTMVEKRVLALSGKPPF 62

Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
           +T  +SC Q    L+ V  Y + G L   + +         +     I  GL  LH++  
Sbjct: 63  LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK-- 120

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD-IPPNPRVGTKRYMS 313
                  I +RD+K  N+++ + G   IADFG+        N  D +      GT  Y++
Sbjct: 121 ------GIIYRDLKLDNVMLDSEGHIKIADFGMCK-----ENMWDGVTTKTFCGTPDYIA 169

Query: 314 PEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           PEI+        ++ + K+ D +A G++L+E+
Sbjct: 170 PEII-------AYQPYGKSVDWWAFGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 21/91 (23%)

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP----RVGTKRYMSP 314
           +  I +RD+K +NIL+   G   I+D GLAV          IP       RVGT  YM+P
Sbjct: 120 RERIVYRDLKPENILLDDRGHIRISDLGLAV---------QIPEGETVRGRVGTVGYMAP 170

Query: 315 EILDESINMDCFESFK-KADIYALGLVLWEV 344
           E+++        E +    D + LG +++E+
Sbjct: 171 EVINN-------EKYTFSPDWWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 51/236 (21%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-----VAVK-----IFFSRDEASWSRETEIYSTVLL 187
           + L + +G+G +G V  G    ++     VAVK     I    +   +  E         
Sbjct: 1   LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD--F 58

Query: 188 RHENILGYIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-------HQMMKI 238
            H N++  IG   + +S     +  ++  +   G L+  L  + L           ++K 
Sbjct: 59  DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKF 118

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YS 292
            + I  G+ +L    F         HRD+ ++N +++ + T  +ADFGL+        Y 
Sbjct: 119 MVDIALGMEYLSNRNF--------IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR 170

Query: 293 Q-LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           Q    KM +         ++++ E L + +    + S  K+D++A G+ +WE+  R
Sbjct: 171 QGRIAKMPV---------KWIAIESLADRV----YTS--KSDVWAFGVTMWEIATR 211

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 33/188 (17%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK-IFFSRDEASWSRETEIYSTVL---LRHENILGY 195
           E +G+G Y  V++G     GE VA+K I    +E + S  T I    L   L+HENI+  
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPS--TAIREISLMKELKHENIVRL 63

Query: 196 IGSDMTSRNSCTQLWLVTHY--HSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
              D+    +  +L LV  Y         D H  R  L+ + +      ++ G+   H  
Sbjct: 64  --HDVIHTEN--KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTK 309
                    + HRD+K +N+L+   G   +ADFGLA ++        IP N     V T 
Sbjct: 120 --------RVLHRDLKPQNLLINKRGELKLADFGLARAFG-------IPVNTFSNEVVTL 164

Query: 310 RYMSPEIL 317
            Y +P++L
Sbjct: 165 WYRAPDVL 172

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 12/76 (15%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I+ GL  LH +         I +RD+K  N+L+  +G   IADFG+         K    
Sbjct: 105 IICGLQFLHKK--------GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK---- 152

Query: 302 PNPRVGTKRYMSPEIL 317
            +   GT  Y++PEIL
Sbjct: 153 ASTFCGTPDYIAPEIL 168

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 50/237 (21%), Positives = 102/237 (43%), Gaps = 60/237 (25%)

Query: 138 ISLSECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVL----LRH 189
           ++LS+ + +G +G ++ G+      G+   V +   +D AS  + T +         L H
Sbjct: 8   VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH 67

Query: 190 ENILGYIGSDMTSRNSCTQL----WLVTHYHSFGSLYDHL---------NRTTLNHHQMM 236
           +NIL  +         C +     +++  Y ++G+L   L         N   L+  Q++
Sbjct: 68  QNILPILHV-------CIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV 120

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD-FGLAVSYSQLS 295
            + + I  G+ +LH        K  + H+DI ++N        CVI +   + ++ + LS
Sbjct: 121 HMAIQIACGMSYLH--------KRGVIHKDIAARN--------CVIDEELQVKITDNALS 164

Query: 296 NKMDIPPNPR--VGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
              D+ P     +G       ++M+ E L        + S   +D+++ G++LWE+ 
Sbjct: 165 R--DLFPMDYHCLGDNENRPVKWMALESLVNKE----YSS--ASDVWSFGVLLWELM 213

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 13/85 (15%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD----IPPNPRVGTKRYMSPEILDE 319
           HRD+K  N+L+  +G   +ADFG  +       KMD    +  +  VGT  Y+SPE+L +
Sbjct: 165 HRDVKPDNMLLDKSGHLKLADFGTCM-------KMDANGMVRCDTAVGTPDYISPEVL-K 216

Query: 320 SINMDCFESFKKADIYALGLVLWEV 344
           S   D     ++ D +++G+ L+E+
Sbjct: 217 SQGGDG-YYGRECDWWSVGVFLYEM 240

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+ ++N+L+       I DFGLA    + SN   I         ++M+P    ESI  
Sbjct: 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAP----ESIFN 315

Query: 324 DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ 383
           + + +   +D+++ G++LWE         IF     PY +L PM+  F +  K       
Sbjct: 316 NLYTTL--SDVWSFGILLWE---------IFTLGGTPYPEL-PMNEQFYNAIK----RGY 359

Query: 384 RPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           R   P    SD     + ++M++CW +   +R
Sbjct: 360 RMAKPAH-ASDE----IYEIMQKCWEEKFEIR 386

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 38/213 (17%)

Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           +GKG +G+V      G  E  A+KI   +D      + E   T++ +    L      +T
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKIL-KKDVIIQDDDVE--CTMVEKRVLALPGKPPFLT 64

Query: 202 SRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGT 256
             +SC Q    L+ V  Y + G L  H+ +         +     I  GL  LH++    
Sbjct: 65  QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---- 120

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYM 312
                I +RD+K  N+++   G   IADFG+         K +I          GT  Y+
Sbjct: 121 ----GIIYRDLKLDNVMLDAEGHIKIADFGMC--------KENIFGGKTTRTFCGTPDYI 168

Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +PEI+        ++ + K+ D +A G++L+E+
Sbjct: 169 APEII-------AYQPYGKSVDWWAFGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 41/231 (17%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-----VAVK-----IFFSRDEASWSRETEIYSTVLL 187
            +L   +GKG +G V       E+     VAVK     IF S D   + RE         
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKE--F 58

Query: 188 RHENILGYIGSDMTSRNSCTQL---WLVTHYHSFGSLYDHL-------NRTTLNHHQMMK 237
            H N++  IG  + SR    +L    ++  +   G L+  L          TL    +++
Sbjct: 59  DHPNVIKLIGVSLRSRAK-GRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVR 117

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
             + I +G+ +L ++ F         HRD+ ++N ++  N T  +ADFGL       S K
Sbjct: 118 FMIDIASGMEYLSSKNF--------IHRDLAARNCMLNENMTVCVADFGL-------SKK 162

Query: 298 MDIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVLWEVCRR 347
           +      R G    +  + L  ES+  + + +   +D++A G+ +WE+  R
Sbjct: 163 IYSGDYYRQGCASKLPVKWLALESLADNVYTT--HSDVWAFGVTMWEIMTR 211

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 31/187 (16%)

Query: 144 IGKGRYGEVWRGVWH-GEN-VAVK-IFFSRDEASWS---RETEIYSTVLLRHENILGYIG 197
           +G+G Y  V++G     EN VA+K I    +E +     RE  +     L+H NI+    
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN--LKHANIVTL-- 68

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
            D+     C  L LV  Y     L  +L+     ++ H +      ++ GL + H     
Sbjct: 69  HDIIHTERC--LTLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH----- 120

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----VSYSQLSNKMDI----PPNPRVG 307
              K  I HRD+K +N+L+   G   +ADFGLA    V     SN++      PP+  +G
Sbjct: 121 ---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG 177

Query: 308 TKRYMSP 314
           +  Y +P
Sbjct: 178 STEYSTP 184

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 26/128 (20%)

Query: 219 GSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL-VKT 276
           G L+D L     L+  ++ KI   +V  L  LH        K  I H DIK +N+L  + 
Sbjct: 94  GDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH--------KHNIIHNDIKLENVLYDRA 145

Query: 277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIY 335
                + D+GL       S   D       GT  Y SPE I       +   SF   D +
Sbjct: 146 KDRIYLCDYGLCKIIGTPS-CYD-------GTLDYFSPEKIKGH----NYDVSF---DWW 190

Query: 336 ALGLVLWE 343
           A+G++ +E
Sbjct: 191 AVGVLTYE 198

Length = 267

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 34/227 (14%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETE----IYSTVLLR---HE 190
           ++L + +G+G +G V  G  + ++  +K+     + +    +E    +   V ++   H 
Sbjct: 1   LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHP 60

Query: 191 NILGYIGSDM--TSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-------HQMMKICLS 241
           N++  IG  +            ++  +   G L+  L  + L           ++K    
Sbjct: 61  NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD 120

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I +G+ +L ++ F         HRD+ ++N ++  N    +ADFG       LS K+   
Sbjct: 121 IASGMEYLSSKSF--------IHRDLAARNCMLNENMNVCVADFG-------LSKKIYNG 165

Query: 302 PNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
              R G    M  + I  ES+    + +  K+D+++ G+ +WE+  R
Sbjct: 166 DYYRQGRIAKMPVKWIAIESLADRVYTT--KSDVWSFGVTMWEIATR 210

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 21/215 (9%)

Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           A+   + + IG+G +GEV + V H    + K++  +  + +       S       +I+ 
Sbjct: 42  AEDYDVVKVIGRGAFGEV-QLVRH--KSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 98

Query: 195 YIGSDMTSRNSCT-----QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           +  S    +  C       L++V  Y   G L + ++   +           +V  L  +
Sbjct: 99  FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 158

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + HRD+K  N+L+  +G   +ADFG  +   +      +  +  VGT 
Sbjct: 159 HSM--------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---VRCDTAVGTP 207

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            Y+SPE+L +S   D +   ++ D +++G+ L+E+
Sbjct: 208 DYISPEVL-KSQGGDGYYG-RECDWWSVGVFLFEM 240

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 19/138 (13%)

Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L+L+  +   G L+  L++  +   + +K  L+ +   L HLH+          I +RD
Sbjct: 72  KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL--------GIIYRD 123

Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +NIL+   G   + DFGL    S+ S   +       GT  YM+PE+++   +    
Sbjct: 124 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT--- 176

Query: 327 ESFKKADIYALGLVLWEV 344
              + AD ++ G++++E+
Sbjct: 177 ---QSADWWSFGVLMFEM 191

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 42.0 bits (98), Expect = 5e-04
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 36/177 (20%)

Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL----NRTTLNH- 232
           E EI +   L HENIL  I   + S  +   +     +  +  +YD      +R  L   
Sbjct: 211 ENEILALGRLNHENILK-IEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQT 269

Query: 233 HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
             +MK  L  V    ++H +         + HRDIK +NI +  +G  V+ DFG A+ + 
Sbjct: 270 RAIMKQLLCAVE---YIHDKK--------LIHRDIKLENIFLNCDGKIVLGDFGTAMPFE 318

Query: 293 QLSNKMDIPPNPR----VGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEV 344
           +                VGT    SPEIL         + + +  DI++ GL+L ++
Sbjct: 319 K-------EREAFDYGWVGTVATNSPEILAG-------DGYCEITDIWSCGLILLDM 361

Length = 501

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 41.1 bits (96), Expect = 7e-04
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 12/76 (15%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I+ GL  LH++         I +RD+K  NIL+ T+G   IADFG+     + +   D  
Sbjct: 105 IICGLQFLHSK--------GIVYRDLKLDNILLDTDGHIKIADFGMC----KENMLGDAK 152

Query: 302 PNPRVGTKRYMSPEIL 317
                GT  Y++PEIL
Sbjct: 153 TCTFCGTPDYIAPEIL 168

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 41.0 bits (96), Expect = 9e-04
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 18/103 (17%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I + L+ LH +         I +RD+K  N+L+   G C +ADFG+      + N     
Sbjct: 105 ITSALMFLHDK--------GIIYRDLKLDNVLLDHEGHCKLADFGMC--KEGIFN--GKT 152

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            +   GT  Y++PEIL E +           D +A+G++L+E+
Sbjct: 153 TSTFCGTPDYIAPEILQEMLYG------PSVDWWAMGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 32/210 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILGYIG- 197
           +G G YG V   +    G  VA+K     F  +  +     E+     ++HEN++G +  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDV 82

Query: 198 -SDMTSRNSCTQLWLVTHYH--SFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            +   S +     +LV  +     G L  H     L+  ++  +   ++ GL ++H    
Sbjct: 83  FTPDLSLDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHA--- 136

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRD+K  N+ V  +    I DFGLA    Q  ++M       V T+ Y +P
Sbjct: 137 -----AGIIHRDLKPGNLAVNEDCELKILDFGLA---RQTDSEM----TGYVVTRWYRAP 184

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
           E++     ++     +  DI+++G ++ E+
Sbjct: 185 EVI-----LNWMHYTQTVDIWSVGCIMAEM 209

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 5/81 (6%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+K  N+L+  +G   +ADFG  +   +++ +  +  +  VGT  Y+SPE+L +S   
Sbjct: 165 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVL-KSQGG 220

Query: 324 DCFESFKKADIYALGLVLWEV 344
           D +   ++ D +++G+ L+E+
Sbjct: 221 DGYYG-RECDWWSVGVFLYEM 240

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 27/184 (14%)

Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E +G+G Y  V++G    +G+ VA+K+   ++E   +  T I    LL+   H NI+  +
Sbjct: 11  EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIV-LL 68

Query: 197 GSDMTSRNSCTQLWLVTHY-HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              + ++ + T   LV  Y H+    Y   +   L+   +      ++ GL ++H     
Sbjct: 69  HDIIHTKETLT---LVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY-- 123

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS----QLSNKMDI----PPNPRVG 307
                 I HRD+K +N+L+   G   +ADFGLA + S      SN++      PP+  +G
Sbjct: 124 ------ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLG 177

Query: 308 TKRY 311
           +  Y
Sbjct: 178 STEY 181

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 47/217 (21%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYS-------TVL--LRHENI 192
           +G G YG V   +    GE VA+K      + S   ++EI++       T+L  ++HEN+
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIK------KLSRPFQSEIFAKRAYRELTLLKHMQHENV 76

Query: 193 LGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLV 247
           +G +   +   S +     +LV  Y     +   L +     L+  ++  +   ++ GL 
Sbjct: 77  IGLLDVFTSAVSGDEFQDFYLVMPY-----MQTDLQKIMGHPLSEDKVQYLVYQMLCGLK 131

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           ++H           I HRD+K  N+ V  +    I DFGLA          D      V 
Sbjct: 132 YIH--------SAGIIHRDLKPGNLAVNEDCELKILDFGLARH-------ADAEMTGYVV 176

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           T+ Y +PE++     ++     +  DI+++G ++ E+
Sbjct: 177 TRWYRAPEVI-----LNWMHYNQTVDIWSVGCIMAEM 208

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 38/196 (19%)

Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT----TLNHH 233
           + E+  +   RH NI+       T   + + LW+++ + ++GS  + L +T     ++  
Sbjct: 47  QNEVVLSHFFRHPNIMTS----WTVFTTGSWLWVISPFMAYGSA-NSLLKTYFPEGMSEA 101

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
            +  I    + GL +LH        +    HR+IK+ +IL+  +G   ++  GL+  YS 
Sbjct: 102 LIGNILFGALRGLNYLH--------QNGYIHRNIKASHILISGDGLVSLS--GLSHLYSL 151

Query: 294 LSNKMDIP-----PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           + N          P        ++SPE+L +    D +    K+DIY++G+   E+    
Sbjct: 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQ----DLYGYNVKSDIYSVGITACEL---- 203

Query: 349 KANGIFEEYKAPYHDL 364
            A G     + P+ D+
Sbjct: 204 -ATG-----RVPFQDM 213

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 33/201 (16%)

Query: 159 GENVAVKIFFSRDEASWS---RETEIYSTVLLRHENI------LGYIGSDMTSRNS---- 205
            + VAVK     D  S     RE +I     L H+NI      LG  GSD+T        
Sbjct: 30  DKRVAVKKIVLTDPQSVKHALREIKI--IRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTE 87

Query: 206 CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
              +++V  Y     L + L +  L+          ++ GL ++H+          + HR
Sbjct: 88  LNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHS--------ANVLHR 138

Query: 266 DIKSKNILVKTNGTCV-IADFGLA-VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           D+K  N+ + T    + I DFGLA +     S+K  +     + TK Y SP +L    N 
Sbjct: 139 DLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEG--LVTKWYRSPRLLLSPNNY 196

Query: 324 DCFESFKKADIYALGLVLWEV 344
                 K  D++A G +  E+
Sbjct: 197 T-----KAIDMWAAGCIFAEM 212

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 23/118 (19%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           +N H +      ++ GL + H        +  + HRD+K +N+L+   G   +ADFGLA 
Sbjct: 101 INMHNVKLFLFQLLRGLNYCH--------RRKVLHRDLKPQNLLINERGELKLADFGLAR 152

Query: 290 SYSQLSNKMDIPPNP---RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           + S       IP       V T  Y  P+IL  S +        + D++ +G + +E+
Sbjct: 153 AKS-------IPTKTYSNEVVTLWYRPPDILLGSTDYS-----TQIDMWGVGCIFYEM 198

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 51/266 (19%)

Query: 144 IGKGRYGEVWR-----GVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G YG V++     G    E    +I  +    S  RE  +     L+H N++     
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRE--LKHPNVIAL--Q 64

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
            +   +S  ++WL+  Y  H    +    +R +  + + M++  S+V  L++   +    
Sbjct: 65  KVFLSHSDRKVWLLFDYAEHDLWHIIK-FHRASKANKKPMQLPRSMVKSLLYQILDGIHY 123

Query: 257 QGKPAIAHRDIKSKNILV----KTNGTCVIADFGLAVSY-SQLSNKMDIPPNPRVGTKRY 311
                + HRD+K  NILV       G   IAD G A  + S L    D+  +P V T  Y
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL--DPVVVTFWY 181

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEV--------CRRTKANGIFEEYKA--PY 361
            +PE+L     +      K  DI+A+G +  E+        CR+       E+ K   P+
Sbjct: 182 RAPELL-----LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ-------EDIKTSNPF 229

Query: 362 H----DLV------PMDPSFDDMRKV 377
           H    D +      P D  ++D+RK+
Sbjct: 230 HHDQLDRIFSVMGFPADKDWEDIRKM 255

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 42/115 (36%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLA--------------VSYSQLSNKMDIPPNPR---- 305
           HRDIK  N+L+   G   ++DFGL               +S++  SN +D    P     
Sbjct: 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKR 183

Query: 306 ----------------VGTKRYMSPEILDES-INMDCFESFKKADIYALGLVLWE 343
                           VGT  Y++PE+  ++  N +C       D ++LG++++E
Sbjct: 184 KAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC-------DWWSLGVIMYE 231

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 17/115 (14%)

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           ++ H +      I+ GL + H        +  + HRD+K +N+L+   G   +ADFGLA 
Sbjct: 101 MSMHNVKIFLYQILRGLAYCH--------RRKVLHRDLKPQNLLINERGELKLADFGLAR 152

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           + S  +       +  V T  Y  P++L     +   E   + D++ +G + +E+
Sbjct: 153 AKSVPTKTY----SNEVVTLWYRPPDVL-----LGSSEYSTQIDMWGVGCIFFEM 198

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 262 IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESI 321
           I +RD+K +N+L+  +G   + DFG A         +D       GT  Y++PEIL   +
Sbjct: 152 IVYRDLKPENLLLDKDGFIKMTDFGFA-------KVVDTRTYTLCGTPEYIAPEIL---L 201

Query: 322 NMDCFESFKKADIYALGLVLWEV 344
           N+      K AD + LG+ ++E+
Sbjct: 202 NVG---HGKAADWWTLGIFIYEI 221

Length = 340

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 27/165 (16%)

Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRD+ ++N+L+       I DFGLA      SN   +         ++M+P    ESI  
Sbjct: 260 HRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAP----ESIFD 313

Query: 324 DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ 383
           + + +   +D+++ G++LWE         IF     PY  ++ +D +F +  K       
Sbjct: 314 NLYTTL--SDVWSYGILLWE---------IFSLGGTPYPGMI-VDSTFYNKIK----SGY 357

Query: 384 RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           R   P     D     +  +M +CW+     R S L +   +  L
Sbjct: 358 RMAKP-----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	443
KOG2052|consensus	513		100.0
KOG3653|consensus	534		100.0
KOG0192|consensus	362		100.0
KOG0197|consensus	468		100.0
KOG1187|consensus	361		100.0
KOG0581|consensus	364		100.0
KOG1026|consensus	774		100.0
KOG0196|consensus	996		100.0
KOG0575|consensus	592		100.0
KOG0595|consensus	429		100.0
KOG0591|consensus	375		100.0
KOG0615|consensus	475		100.0
KOG4721|consensus	904		100.0
KOG0592|consensus	604		100.0
KOG1094|consensus	807		100.0
KOG0598|consensus	357		100.0
KOG0582|consensus	516		100.0
KOG0198|consensus	313		100.0
KOG0193|consensus	678		100.0
KOG1095|consensus	1025		100.0
KOG0593|consensus	396		100.0
KOG0578|consensus	550		100.0
KOG0659|consensus	318		100.0
KOG0600|consensus	560		100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0661|consensus	538		100.0
KOG0194|consensus	474		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0663|consensus	419		100.0
KOG0201|consensus	467		100.0
KOG0583|consensus	370		100.0
KOG0694|consensus	694		100.0
KOG0585|consensus	576		100.0
KOG0588|consensus	786		100.0
KOG0616|consensus	355		100.0
KOG0597|consensus	808		100.0
KOG0605|consensus	550		100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0658|consensus	364		100.0
KOG0660|consensus	359		100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG1989|consensus	738		100.0
KOG4278|consensus	1157		100.0
KOG1025|consensus	1177		100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0594|consensus	323		100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG2345|consensus	302		100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG0589|consensus	426		100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0033|consensus	355		100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG4257|consensus	974		100.0
KOG0611|consensus	668		100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0580|consensus	281		100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0599|consensus	411		100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0199|consensus	1039		100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0610|consensus	459		100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG0577|consensus	948		100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
KOG0667|consensus	586		100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0574|consensus	502		100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG4279|consensus	1226		100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0032|consensus	382		100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
KOG4717|consensus	864		100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG0200|consensus	609		100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
KOG0584|consensus	632		100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG1024|consensus	563		100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
KOG0579|consensus	1187		100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
KOG0983|consensus	391		100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
KOG4645|consensus	1509		100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG1035|consensus	1351		100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0596|consensus	677		100.0
KOG0586|consensus	596		100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
KOG0604|consensus	400		100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG4250|consensus	732		100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
KOG0986|consensus	591		100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
KOG0612|consensus	1317		100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG0587|consensus	953		100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0666|consensus	438		100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0669|consensus	376		100.0
KOG0690|consensus	516		100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
KOG1006|consensus	361		100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0696|consensus	683		100.0
KOG0603|consensus	612		100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG1151|consensus	775		100.0
KOG0662|consensus	292		100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG4236|consensus	888		100.0
KOG1027|consensus	903		100.0
KOG0607|consensus	463		100.0
KOG0984|consensus	282		100.0
KOG0614|consensus	732		100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0695|consensus	593		100.0
KOG0671|consensus	415		100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0576|consensus	829		99.98
KOG0664|consensus	449		99.97
KOG0608|consensus	1034		99.97
KOG0668|consensus	338		99.97
KOG1290|consensus	590		99.97
KOG1152|consensus	772		99.97
KOG1345|consensus	378		99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG0665|consensus	369		99.96
KOG0670|consensus	752		99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG0195|consensus	448		99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
KOG1167|consensus	418		99.95
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG1164|consensus	322		99.91
KOG1165|consensus	449		99.91
KOG1163|consensus	341		99.91
KOG0590|consensus	601		99.91
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.9
KOG1023|consensus	484		99.9
KOG4158|consensus	598		99.89
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.87
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.87
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.86
KOG0603|consensus	612		99.85
PRK10345	210	hypothetical protein; Provisional	99.84
KOG1240|consensus	1431		99.83
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.83
PRK12274	218	serine/threonine protein kinase; Provisional	99.82
KOG1166|consensus	974		99.81
smart00090	237	RIO RIO-like kinase.	99.78
PRK14879	211	serine/threonine protein kinase; Provisional	99.77
KOG0606|consensus	1205		99.77
KOG1033|consensus	516		99.76
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.75
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.75
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.74
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.68
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.68
KOG1266|consensus	458		99.65
KOG0590|consensus	601		99.65
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.63
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.54
KOG0601|consensus	524		99.45
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.44
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.37
KOG0601|consensus	524		99.24
KOG1243|consensus	690		99.23
KOG0606|consensus	1205		99.23
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.23
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.16
KOG3741|consensus	655		99.12
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.12
COG4248	637	Uncharacterized protein with protein kinase and he	99.12
KOG3087|consensus	229		99.02
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.0
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.86
KOG2137|consensus	700		98.82
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.71
PRK09902	216	hypothetical protein; Provisional	98.7
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.54
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.51
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.39
PF01636	239	APH: Phosphotransferase enzyme family This family	98.35
KOG1235|consensus	538		98.23
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.22
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.18
KOG1035|consensus	1351		98.18
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.15
KOG0576|consensus	829		98.11
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.11
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.04
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.95
PRK10593	297	hypothetical protein; Provisional	97.91
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.85
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.84
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.79
PLN02876	822	acyl-CoA dehydrogenase	97.77
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.69
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.53
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.52
KOG1826|consensus	2724		97.3
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.1
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.06
PRK05231	319	homoserine kinase; Provisional	97.05
KOG2270|consensus	520		97.01
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.91
PLN02236	344	choline kinase	96.88
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.75
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.32
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.18
KOG2268|consensus	465		96.15
PLN02756	418	S-methyl-5-thioribose kinase	96.11
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.11
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.92
KOG1093|consensus	725		95.7
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	95.68
PTZ00384	383	choline kinase; Provisional	95.65
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.53
KOG4258|consensus	1025		95.52
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.49
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.31
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	95.08
KOG1236|consensus	565		94.98
PRK12396	409	5-methylribose kinase; Reviewed	94.84
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.82
COG2334	331	Putative homoserine kinase type II (protein kinase	94.76

>KOG2052|consensus

Probab=100.00  E-value=2.1e-71  Score=520.22  Aligned_cols=416  Identities=60%  Similarity=0.974  Sum_probs=351.3

Q ss_pred             CeeEecCCCCCCCCCCCCCCCCCCCCCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhcCCC
Q psy14889         11 QFTIQCCDGDFCNNGSFPILPPSYRELPEYAQRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDP   90 (443)
Q Consensus        11 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (443)
                      -...-||.+++||+...+.++|..... ..+... ....+...+++.++.+.+++.+.++.+++++++.....+....++
T Consensus        96 ~~~~~CC~~d~CN~~~i~~~~~~~~~~-~~~~~~-~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  173 (513)
T KOG2052|consen   96 FRNIECCYGDYCNNILIPLLLPHPQKP-FTPGML-GPVELVAIILGPVVFLLLIAILTVLGCFYRKRRYHERQRPNREDP  173 (513)
T ss_pred             ceEEEecCccccccccCCCCCCCCCCC-CCcccC-ChHHHHHHHHHHHHHHHHHHHHHHheeeeeeecchhhccccccCc
Confidence            467788889999998887766553322 111111 222233333333333333333332222222211111101001111


Q ss_pred             cccchhhHHHhhhcCCCchhHHhhhhcccCCCCCCCchHHHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeecc
Q psy14889         91 DCFLADADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR  170 (443)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~  170 (443)
                      .        ..+...+++++++.++...++++++++|++.++.+.+++++.+.||+|.||+||+|.|.|+.||||++...
T Consensus       174 ~--------~~~~~~~~stl~Dll~~~~tSGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr  245 (513)
T KOG2052|consen  174 S--------TEATLAGDSTLKDLLDDLETSGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR  245 (513)
T ss_pred             c--------ccccccCCccHHHHHHhhccCCCCCCchhHhHHhhhheeEEEEEecCccccceeeccccCCceEEEEeccc
Confidence            1        01256778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Q psy14889        171 DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH  250 (443)
Q Consensus       171 ~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH  250 (443)
                      ++..+.+|.||.....|+|+||+.|++.-..+.+...++|||++|.+.|||+|||.+..++.+..++++..+|.||+|||
T Consensus       246 dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH  325 (513)
T KOG2052|consen  246 DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLH  325 (513)
T ss_pred             chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHH
Confidence            99999999999999999999999999998888888899999999999999999999999999999999999999999999


Q ss_pred             HchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCC
Q psy14889        251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK  330 (443)
Q Consensus       251 ~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  330 (443)
                      ...+++|++|.|.|||||+.|||+..++.+.|+|+|||..........+.+.+..+||.+|||||++....+...++...
T Consensus       326 ~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk  405 (513)
T KOG2052|consen  326 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK  405 (513)
T ss_pred             HHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence            99999999999999999999999999999999999999988888788888889999999999999999888877777778


Q ss_pred             ccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcC
Q psy14889        331 KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ  410 (443)
Q Consensus       331 ~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  410 (443)
                      .+||||||.|+||++.+..-.++.++++.||.++++.+++++++++.++.+..+|.+|++|.++++...+.++|+.||..
T Consensus       406 ~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~  485 (513)
T KOG2052|consen  406 RADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYA  485 (513)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcC
Confidence            89999999999999999888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        411 NANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       411 dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                      ||..|.|+--|.+.|.++.+.++..+
T Consensus       486 Np~aRltALriKKtl~~l~~~~ek~k  511 (513)
T KOG2052|consen  486 NPAARLTALRIKKTLAKLSNSDEKIK  511 (513)
T ss_pred             CchhhhHHHHHHHHHHHHhcChhhhc
Confidence            99999999999999999998765543

>KOG3653|consensus

Probab=100.00  E-value=1.7e-62  Score=463.40  Aligned_cols=297  Identities=39%  Similarity=0.715  Sum_probs=267.5

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ..+++.++||+|+||.||+|+++++.||||++...+.+.+..|++|+.+-.++|+||++|+++-........++|||+||
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence            46778899999999999999999999999999988889999999999999999999999999876555444679999999


Q ss_pred             cCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh-cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF-GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~-~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      .++|+|.+||+...++|....+|+..+++||+|||+... +.+.+|+|+|||||++||||.+|+++.|+|||+|..+...
T Consensus       290 h~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~  369 (534)
T KOG3653|consen  290 HPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG  369 (534)
T ss_pred             ccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCC
Confidence            999999999999999999999999999999999998754 4778999999999999999999999999999999888754


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC--CcccccCCCCCCCCCCCCChH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN--GIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~--~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....+  ....+||.+|||||++.+..+........+.||||+|.|||||++++...  +..+.++.||+.....++..+
T Consensus       370 ~~~~d--~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e  447 (534)
T KOG3653|consen  370 KPQGD--THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE  447 (534)
T ss_pred             CCCcc--hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence            43332  23479999999999999887664223446899999999999999999876  778889999999999999999


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      +++..+..+..||.+|..|........+++.+..||+.||+.|.|+.-+.+++.++....+.
T Consensus       448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            99999999999999999999998999999999999999999999999999999999877654

>KOG0192|consensus

Probab=100.00  E-value=2.8e-52  Score=403.24  Aligned_cols=260  Identities=32%  Similarity=0.542  Sum_probs=215.9

Q ss_pred             ccccccceeeeecCeEEEEEEECCce-eEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~-vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..+.+.+.||+|+||+||+|.|.|+. ||||++......   ......|+..+.+++|||||+|+|++.....   .+.+
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---~~~i  117 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---SLCI  117 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---ceEE
Confidence            45566777999999999999999998 999998764422   2234556666666999999999999988742   4789


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC-eEEeCCCCCCEEEcCCC-cEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA-IAHRDIKSKNILVKTNG-TCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~-iiHrDlk~~NiLl~~~~-~~kl~DfG  286 (443)
                      ||||+++|+|.+++++   ..+++..++.++.|||+||.|||++        + ||||||||+|||++.++ ++||+|||
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~--------~~iIHrDLK~~NiLv~~~~~~~KI~DFG  189 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE--------GPIIHRDLKSDNILVDLKGKTLKIADFG  189 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC--------CCeeecccChhhEEEcCCCCEEEECCCc
Confidence            9999999999999955   6899999999999999999999998        6 99999999999999998 99999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......    ...+...||+.|||||++.+.    ...|+.|+||||||++||||+||          +.||.+..+
T Consensus       190 lsr~~~~~~----~~~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~----------~~Pf~~~~~  251 (362)
T KOG0192|consen  190 LSREKVISK----TSMTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTG----------EIPFEDLAP  251 (362)
T ss_pred             cceeecccc----ccccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHC----------CCCCCCCCH
Confidence            997765422    112336899999999999953    11788999999999999999999          889988632


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                           ......+.....++.+|.     .+++.+..||.+||+.||++||++.+++..|+.+......
T Consensus       252 -----~~~~~~v~~~~~Rp~~p~-----~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  252 -----VQVASAVVVGGLRPPIPK-----ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             -----HHHHHHHHhcCCCCCCCc-----cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence                 344444555677777774     3778899999999999999999999999999988775443

>KOG0197|consensus

Probab=100.00  E-value=8.3e-52  Score=399.21  Aligned_cols=259  Identities=26%  Similarity=0.456  Sum_probs=214.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEECCc-eeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ...+.+++.+.||+|.||+||.|.|++. .||+|.++........+..|+..+.+|+|+|||+++|+|....+    ++|
T Consensus       203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p----iyI  278 (468)
T KOG0197|consen  203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP----IYI  278 (468)
T ss_pred             ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCc----eEE
Confidence            3446688899999999999999999876 99999998755443444455566666999999999999988753    799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |||||+.|+|.+||+.   ..+...+.+.++.|||+||+||+++        ++|||||.++||||+++..+||+|||||
T Consensus       279 VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~--------~~IHRDLAARNiLV~~~~~vKIsDFGLA  350 (468)
T KOG0197|consen  279 VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK--------NYIHRDLAARNILVDEDLVVKISDFGLA  350 (468)
T ss_pred             EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC--------CccchhhhhhheeeccCceEEEcccccc
Confidence            9999999999999975   5699999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +...+.....   .....-...|.|||.+..+      .++.|||||||||+||||+|-         ++.||.++    
T Consensus       351 r~~~d~~Y~~---~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~---------G~~py~~m----  408 (468)
T KOG0197|consen  351 RLIGDDEYTA---SEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTY---------GRVPYPGM----  408 (468)
T ss_pred             cccCCCceee---cCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhcc---------CCCCCCCC----
Confidence            9554332221   1222345689999999988      788999999999999999986         47888876    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                       ...++.+.+... .+.+-|     +.||+++.++|+.||+.+|++|||++.+...|+.+....
T Consensus       409 -sn~ev~~~le~G-yRlp~P-----~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  409 -SNEEVLELLERG-YRLPRP-----EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             -CHHHHHHHHhcc-CcCCCC-----CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence             455666666443 333333     459999999999999999999999999999999887654

>KOG1187|consensus

Probab=100.00  E-value=6.6e-50  Score=389.31  Aligned_cols=282  Identities=28%  Similarity=0.375  Sum_probs=214.8

Q ss_pred             CCCCchHHHhhhhccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeecc
Q psy14889        123 GSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDM  200 (443)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~  200 (443)
                      ...+.......++++|...+.||+|+||.||+|... |..||||++...... ...+..|+..+.+++|||+|+|+|||.
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~  141 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL  141 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence            334566677788899999999999999999999994 589999988665443 333556666666699999999999999


Q ss_pred             ccCCcccEEEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        201 TSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       201 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      +...   +..||+|||++|+|.++|+..   .++|.++++|+.++|+||+|||+.+     .|+||||||||+|||||++
T Consensus       142 e~~~---~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~-----~~~iiHrDiKssNILLD~~  213 (361)
T KOG1187|consen  142 EGGE---HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC-----PPPIIHRDIKSSNILLDED  213 (361)
T ss_pred             cCCc---eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC-----CCCEecCCCCHHHeeECCC
Confidence            8753   479999999999999999753   7899999999999999999999873     6689999999999999999


Q ss_pred             CcEEEEecCCcccccc-cCCcCCCCCCCc-ccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc
Q psy14889        278 GTCVIADFGLAVSYSQ-LSNKMDIPPNPR-VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE  355 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~-~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~  355 (443)
                      +++||+|||+|+.... ....     ... .||.+|+|||++..+      ..+.|+|||||||+|+||+||+++.+...
T Consensus       214 ~~aKlsDFGLa~~~~~~~~~~-----~~~~~gt~gY~~PEy~~~g------~lt~KsDVySFGVvllElitgr~~~d~~~  282 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEGDTSV-----STTVMGTFGYLAPEYASTG------KLTEKSDVYSFGVVLLELITGRKAVDQSR  282 (361)
T ss_pred             CCEEccCccCcccCCccccce-----eeecCCCCccCChhhhccC------CcCcccccccchHHHHHHHhCCcccCCCC
Confidence            9999999999965543 2111     112 799999999999876      77899999999999999999976543211


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhh----cCCCCCCCCCCCCc-hhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICI----DQQRPVLPNRWVSD-STLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                          |-..    ....+.....+..    +...+.+....... .....+..+..+|++.+|.+||+|.||++.|+.+..
T Consensus       283 ----~~~~----~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  283 ----PRGE----LSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             ----Cccc----ccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence                1110    0011111112111    11223322111121 456678899999999999999999999999976654


Q ss_pred             c
Q psy14889        431 A  431 (443)
Q Consensus       431 ~  431 (443)
                      .
T Consensus       355 ~  355 (361)
T KOG1187|consen  355 L  355 (361)
T ss_pred             c
Confidence            4

>KOG0581|consensus

Probab=100.00  E-value=5.5e-50  Score=370.31  Aligned_cols=251  Identities=27%  Similarity=0.384  Sum_probs=205.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch--HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW--SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~--~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .+++..+.||+|..|+||++++  +++.+|+|++....+...  +-.+|+..+...+||+||.+||.|.....   ++.+
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~---~isI  155 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE---EISI  155 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc---eEEe
Confidence            4677788999999999999998  588999999854433322  23456666666899999999999988742   5899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||||.+|||++++.. +++++....+++.+|++||.|||..+       +||||||||+|||++..|.+||+|||.++.
T Consensus       156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~-------~IIHRDIKPsNlLvNskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER-------KIIHRDIKPSNLLVNSKGEVKICDFGVSGI  228 (364)
T ss_pred             ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc-------CeeeccCCHHHeeeccCCCEEeccccccHH
Confidence            9999999999999975 77999999999999999999999632       999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      +...      ..++++||..|||||.+.+.      .|+.++||||||++++|+++|          ++||....+....
T Consensus       229 lvnS------~a~tfvGT~~YMsPERi~g~------~Ys~~sDIWSLGLsllE~a~G----------rfP~~~~~~~~~~  286 (364)
T KOG0581|consen  229 LVNS------IANTFVGTSAYMSPERISGE------SYSVKSDIWSLGLSLLELAIG----------RFPYPPPNPPYLD  286 (364)
T ss_pred             hhhh------hcccccccccccChhhhcCC------cCCcccceecccHHHHHHhhC----------CCCCCCcCCCCCC
Confidence            7643      24678999999999999998      788899999999999999999          6666553222223


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .-++...+. ....|.+|..    .++++++.++..||++||.+|||++|+++
T Consensus       287 ~~~Ll~~Iv-~~ppP~lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  287 IFELLCAIV-DEPPPRLPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHHHh-cCCCCCCCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            333333332 3455666642    47788999999999999999999999886

>KOG1026|consensus

Probab=100.00  E-value=3.9e-50  Score=405.61  Aligned_cols=265  Identities=26%  Similarity=0.368  Sum_probs=216.2

Q ss_pred             HHhhhhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeecc
Q psy14889        130 IQRTLAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDM  200 (443)
Q Consensus       130 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~  200 (443)
                      ..+..+.+..+.+.||+|.||+||+|+..       ...||||.++...+.  ...+++|+..+..++|||||+|+|+|.
T Consensus       480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR  559 (774)
T ss_pred             eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence            34455678889999999999999999874       357999999776543  333445555555699999999999999


Q ss_pred             ccCCcccEEEeeecccCcccHHHHhcc-----------c----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        201 TSRNSCTQLWLVTHYHSFGSLYDHLNR-----------T----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       201 ~~~~~~~~~~lv~e~~~~gsL~~~l~~-----------~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      .+++    ++||+|||..|||.+||+-           .    +|+..+.+.||.|||.||+||-++        .+|||
T Consensus       560 ~~~P----~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~--------~FVHR  627 (774)
T KOG1026|consen  560 EGDP----LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH--------HFVHR  627 (774)
T ss_pred             cCCe----eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------ccccc
Confidence            9865    7999999999999999941           2    288999999999999999999999        78999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||..+|+||.++..+||+||||++.+.......  ......-.++|||||.+..+      ++|++||||||||+|||++
T Consensus       628 DLATRNCLVge~l~VKIsDfGLsRdiYssDYYk--~~~~t~lPIRWMppEsIly~------kFTteSDVWs~GVvLWEIF  699 (774)
T KOG1026|consen  628 DLATRNCLVGENLVVKISDFGLSRDIYSSDYYK--VRGNTLLPIRWMPPESILYG------KFTTESDVWSFGVVLWEIF  699 (774)
T ss_pred             chhhhhceeccceEEEecccccchhhhhhhhhc--ccCCceeeeecCCHHHhhcC------cccchhhhhhhhhhhhhhh
Confidence            999999999999999999999998765432211  11223446799999999988      8889999999999999998


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      +-         +..||.+.     +.+++.+.+.....   ++.   ++.||.++++||..||+.+|++|||++||..+|
T Consensus       700 sy---------G~QPy~gl-----Sn~EVIe~i~~g~l---L~~---Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L  759 (774)
T KOG1026|consen  700 SY---------GKQPYYGL-----SNQEVIECIRAGQL---LSC---PENCPTEVYSLMLECWNENPKRRPSFKEIHSRL  759 (774)
T ss_pred             cc---------ccCccccc-----chHHHHHHHHcCCc---ccC---CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence            74         48899887     44666666643333   332   367999999999999999999999999999999


Q ss_pred             HHHhhcccc
Q psy14889        426 IKLACADMY  434 (443)
Q Consensus       426 ~~l~~~~~~  434 (443)
                      +...+..+.
T Consensus       760 ~~~~~~s~~  768 (774)
T KOG1026|consen  760 QAWAQASPK  768 (774)
T ss_pred             HHHHhcCcc
Confidence            999877554

>KOG0196|consensus

Probab=100.00  E-value=1e-49  Score=395.47  Aligned_cols=290  Identities=24%  Similarity=0.356  Sum_probs=233.9

Q ss_pred             hhHHhhhhcccCCCCCCCchHHHhhhhccccccceeeeecCeEEEEEEEC--C---ceeEEEEeeccCcc--chHHHHHH
Q psy14889        109 TLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH--G---ENVAVKIFFSRDEA--SWSRETEI  181 (443)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~~~~--~~~~e~ei  181 (443)
                      ..+.++++....++......+..+.-...+.+.++||.|.||+|++|+++  |   ..||||.++....+  +..+..|.
T Consensus       602 G~k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EA  681 (996)
T KOG0196|consen  602 GTKTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEA  681 (996)
T ss_pred             CceeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhh
Confidence            35666666666655555555566666678889999999999999999983  3   57999999764332  22333445


Q ss_pred             HHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCC
Q psy14889        182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK  259 (443)
Q Consensus       182 ~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~  259 (443)
                      -++.+++||||++|.|+.....+    ++||+|||+||+|+.||++  +.+++.++..++++||.||.||-+.       
T Consensus       682 sIMGQFdHPNIIrLEGVVTks~P----vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm-------  750 (996)
T KOG0196|consen  682 SIMGQFDHPNIIRLEGVVTKSKP----VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM-------  750 (996)
T ss_pred             hhcccCCCCcEEEEEEEEecCce----eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc-------
Confidence            55555999999999999877744    7999999999999999964  6799999999999999999999988       


Q ss_pred             CCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHH
Q psy14889        260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL  339 (443)
Q Consensus       260 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gv  339 (443)
                       ++|||||.++|||++.+..+|++|||+++.+.++.... .....-.-..+|.|||.+...      ++|.+||||||||
T Consensus       751 -~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~-ytt~GGKIPiRWTAPEAIa~R------KFTsASDVWSyGI  822 (996)
T KOG0196|consen  751 -NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA-YTTLGGKIPIRWTAPEAIAYR------KFTSASDVWSYGI  822 (996)
T ss_pred             -CchhhhhhhhheeeccceEEEeccccceeecccCCCcc-ccccCCccceeecChhHhhhc------ccCchhhccccce
Confidence             99999999999999999999999999999887655222 111222234689999999887      7889999999999


Q ss_pred             HHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       340 vl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +|||.++-         ++.||+++     +.+++.+.+..+...|..      .+||..+.+||..||++|-.+||.+.
T Consensus       823 VmWEVmSy---------GERPYWdm-----SNQdVIkaIe~gyRLPpP------mDCP~aL~qLMldCWqkdR~~RP~F~  882 (996)
T KOG0196|consen  823 VMWEVMSY---------GERPYWDM-----SNQDVIKAIEQGYRLPPP------MDCPAALYQLMLDCWQKDRNRRPKFA  882 (996)
T ss_pred             EEEEeccc---------CCCccccc-----chHHHHHHHHhccCCCCC------CCCcHHHHHHHHHHHHHHhhcCCCHH
Confidence            99998863         38899987     556777777655444433      44999999999999999999999999


Q ss_pred             HHHHHHHHHhhccccccC
Q psy14889        420 RVKKTLIKLACADMYIHC  437 (443)
Q Consensus       420 evl~~L~~l~~~~~~~~~  437 (443)
                      +|+..|+++......++.
T Consensus       883 qiV~~lDklIrnP~SLk~  900 (996)
T KOG0196|consen  883 QIVSTLDKLIRNPNSLKT  900 (996)
T ss_pred             HHHHHHHHHhcCchhhcc
Confidence            999999999988776664

>KOG0575|consensus

Probab=100.00  E-value=1.9e-48  Score=379.78  Aligned_cols=243  Identities=26%  Similarity=0.371  Sum_probs=204.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc----CccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR----DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~----~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ..|...+.||+|||+.+|+++.  +|+.||+|++.+.    ......-..||.+.+.|+|||||+++++|.+..    .+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~----nV   93 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN----NV   93 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC----ce
Confidence            5799999999999999999987  6999999998652    233333346677777799999999999999985    48


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |||.|+|.+|+|..++++ ..+++.++..++.||+.||.|||++        +|||||||..|++++++.++||+|||||
T Consensus        94 YivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~--------~IiHRDLKLGNlfL~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   94 YIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL--------GIIHRDLKLGNLFLNENMNVKIGDFGLA  165 (592)
T ss_pred             EEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc--------CceecccchhheeecCcCcEEeccccee
Confidence            999999999999999974 6899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+......    ..+.+||+.|.|||++...      ..+..+||||+||+||-|++|          ++||+..    
T Consensus       166 t~le~~~Er----k~TlCGTPNYIAPEVl~k~------gHsfEvDiWSlGcvmYtLL~G----------~PPFetk----  221 (592)
T KOG0575|consen  166 TQLEYDGER----KKTLCGTPNYIAPEVLNKS------GHSFEVDIWSLGCVMYTLLVG----------RPPFETK----  221 (592)
T ss_pred             eeecCcccc----cceecCCCcccChhHhccC------CCCCchhhhhhhhHHHhhhhC----------CCCcccc----
Confidence            888754332    2457999999999999866      677899999999999999999          6777653    


Q ss_pred             CChHHH-HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDM-RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ...+. .++...+.   .+|     ...+.+..+||.++|+.||.+|||+++|+.
T Consensus       222 -~vkety~~Ik~~~Y---~~P-----~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  222 -TVKETYNKIKLNEY---SMP-----SHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             -hHHHHHHHHHhcCc---ccc-----cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             23333 33433332   233     236678999999999999999999999986

>KOG0595|consensus

Probab=100.00  E-value=1.1e-48  Score=364.67  Aligned_cols=244  Identities=25%  Similarity=0.345  Sum_probs=198.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .+|.+.+.||+|+||+||+|++  ++..||||.+.......   ...+.||..++.++|||||++++++.++    ..+|
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~----~~i~   85 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD----DFIY   85 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC----CeEE
Confidence            6789999999999999999998  58999999886654222   2236788888889999999999999888    4689


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC------CcEEEE
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN------GTCVIA  283 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~------~~~kl~  283 (443)
                      ||||||.+|||.+|+++ +.+++..+..++.|+|.||++||++        +||||||||+||||+..      -.+||+
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~--------~IiHRDLKPQNiLLs~~~~~~~~~~LKIA  157 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN--------NIIHRDLKPQNILLSTTARNDTSPVLKIA  157 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCCcceEEeccCCCCCCCceEEec
Confidence            99999999999999986 4899999999999999999999999        99999999999999875      468999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+|+.+.....     ..+.+|++.|||||++...      .|+.|+|+||.|+++||+++|          ..||..
T Consensus       158 DFGfAR~L~~~~~-----a~tlcGSplYMAPEV~~~~------~YdAKADLWSiG~Ilyq~l~g----------~~Pf~a  216 (429)
T KOG0595|consen  158 DFGFARFLQPGSM-----AETLCGSPLYMAPEVIMSQ------QYDAKADLWSIGTILYQCLTG----------KPPFDA  216 (429)
T ss_pred             ccchhhhCCchhH-----HHHhhCCccccCHHHHHhc------cccchhhHHHHHHHHHHHHhC----------CCCccc
Confidence            9999998875332     2456999999999999876      788999999999999999999          667765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      .     +..++...+.......+.++.    .....+.+++...+..+|.+|.++.+-
T Consensus       217 ~-----t~~eL~~~~~k~~~~~~~~~~----~~s~~~~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  217 E-----TPKELLLYIKKGNEIVPVLPA----ELSNPLRELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             c-----CHHHHHHHHhccccccCchhh----hccCchhhhhhHHHhcCccccCchHHh
Confidence            3     345555544433333333322    233446678888888888888876653

>KOG0591|consensus

Probab=100.00  E-value=1.3e-49  Score=353.48  Aligned_cols=255  Identities=27%  Similarity=0.409  Sum_probs=204.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH---HHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR---ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~---e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .+|++.+.||+|+||+||++..  +|..||.|.+.-...+...+   -.||..+++|+|||||++++.....++  ..++
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~--evln   96 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN--EVLN   96 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc--hhhH
Confidence            5799999999999999999986  89999999876433222222   367777888999999999995444332  2379


Q ss_pred             eeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ||||||..|||...++.     +.+++..+++++.|+++||..+|+..-    ..-|+||||||.||+|+.+|.+||+||
T Consensus        97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~----r~~VmHRDIKPaNIFl~~~gvvKLGDf  172 (375)
T KOG0591|consen   97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP----RGTVMHRDIKPANIFLTANGVVKLGDF  172 (375)
T ss_pred             HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc----ccceeeccCcchheEEcCCCceeeccc
Confidence            99999999999999853     569999999999999999999998421    113999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.+......    ..+.+|||.||+||.+.+.      .|+.||||||+||++|||+.-          +.||.+. 
T Consensus       173 GL~r~l~s~~tf----A~S~VGTPyYMSPE~i~~~------~Y~~kSDiWslGCllyEMcaL----------~~PF~g~-  231 (375)
T KOG0591|consen  173 GLGRFLSSKTTF----AHSLVGTPYYMSPERIHES------GYNFKSDIWSLGCLLYEMCAL----------QSPFYGD-  231 (375)
T ss_pred             hhHhHhcchhHH----HHhhcCCCcccCHHHHhcC------CCCcchhHHHHHHHHHHHHhc----------CCCcccc-
Confidence            999988754332    3567999999999999988      888999999999999999987          8888874 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                          ....+.+.+.. ...+++|.    +..+..+.+|+..|+..||+.||+...++..+.
T Consensus       232 ----n~~~L~~KI~q-gd~~~~p~----~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  232 ----NLLSLCKKIEQ-GDYPPLPD----EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             ----cHHHHHHHHHc-CCCCCCcH----HHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence                44555555543 34455553    346678999999999999999998544444443

>KOG0615|consensus

Probab=100.00  E-value=8e-49  Score=365.15  Aligned_cols=255  Identities=24%  Similarity=0.310  Sum_probs=202.7

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--------hHHHHHHHHHHhccCCCceeeeeeccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--------WSRETEIYSTVLLRHENILGYIGSDMT  201 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--------~~~e~ei~~~~~l~H~nIv~l~g~~~~  201 (443)
                      +.+.+.|.+.+.||+|+||.|-+|..  +|+.||||++.++....        ..-+.|+..+++|+|||||++++++..
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            34567888999999999999999987  69999999986543211        122456666667999999999999988


Q ss_pred             cCCcccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---  277 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---  277 (443)
                      ++.    .||||||+++|+|.+.+- ++.+.+..-..++.|++.|+.|||+.        ||+||||||+|||+..+   
T Consensus       248 ~ds----~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~--------GI~HRDiKPeNILl~~~~e~  315 (475)
T KOG0615|consen  248 PDS----SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ--------GIIHRDIKPENILLSNDAED  315 (475)
T ss_pred             CCc----eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc--------CcccccCCcceEEeccCCcc
Confidence            854    699999999999999884 56788888899999999999999999        99999999999999877   


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      ..+||+|||+|+.....+     ...+++||+.|.|||++.+....   .+..++|+||+||+||-+++|          
T Consensus       316 ~llKItDFGlAK~~g~~s-----fm~TlCGTpsYvAPEVl~~kg~~---~~~~kVDiWSlGcvLfvcLsG----------  377 (475)
T KOG0615|consen  316 CLLKITDFGLAKVSGEGS-----FMKTLCGTPSYVAPEVLASKGVE---YYPSKVDIWSLGCVLFVCLSG----------  377 (475)
T ss_pred             eEEEecccchhhccccce-----ehhhhcCCccccChhheecCCee---cccchheeeeccceEEEEecc----------
Confidence            679999999998876422     23678999999999999865321   233589999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..||.+......    +.+.+. .+...-.|..|  ..++++..+||.+||..||++|||++|+++
T Consensus       378 ~pPFS~~~~~~s----l~eQI~-~G~y~f~p~~w--~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  378 YPPFSEEYTDPS----LKEQIL-KGRYAFGPLQW--DRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             CCCcccccCCcc----HHHHHh-cCcccccChhh--hhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            778877543211    222222 12223333333  457889999999999999999999999886

>KOG4721|consensus

Probab=100.00  E-value=1.6e-47  Score=367.84  Aligned_cols=245  Identities=28%  Similarity=0.452  Sum_probs=207.9

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.+.-++-||+|+-|.||+|++.++.||||.+      ...+|.+|..+++|+||||+.|.|+|...    ..++|||||
T Consensus       124 e~IsELeWlGSGaQGAVF~Grl~netVAVKKV------~elkETdIKHLRkLkH~NII~FkGVCtqs----PcyCIiMEf  193 (904)
T KOG4721|consen  124 EEISELEWLGSGAQGAVFLGRLHNETVAVKKV------RELKETDIKHLRKLKHPNIITFKGVCTQS----PCYCIIMEF  193 (904)
T ss_pred             HHhhhhhhhccCcccceeeeeccCceehhHHH------hhhhhhhHHHHHhccCcceeeEeeeecCC----ceeEEeeec
Confidence            34455678999999999999999999999976      33568889999999999999999999877    468999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      |..|-|+..|+. ..++......+..+||.||.|||.+        .|||||||.-||||+.+..+||+|||-++.+...
T Consensus       194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h--------KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~  265 (904)
T KOG4721|consen  194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH--------KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK  265 (904)
T ss_pred             cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh--------hHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence            999999999975 6789999999999999999999999        8999999999999999999999999999888765


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ++.     ..+.||..|||||++...      ..+.|+||||||||||||+||          ..||.+.....    .+
T Consensus       266 STk-----MSFaGTVaWMAPEvIrne------PcsEKVDIwSfGVVLWEmLT~----------EiPYkdVdssA----II  320 (904)
T KOG4721|consen  266 STK-----MSFAGTVAWMAPEVIRNE------PCSEKVDIWSFGVVLWEMLTG----------EIPYKDVDSSA----II  320 (904)
T ss_pred             hhh-----hhhhhhHhhhCHHHhhcC------CcccccceehhHHHHHHHHhc----------CCCccccchhe----eE
Confidence            443     357899999999999987      777999999999999999999          88998763321    11


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      .. +-........     +..|++.++-||++||+..|.+|||+.+|+..|+-..
T Consensus       321 wG-VGsNsL~Lpv-----PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~  369 (904)
T KOG4721|consen  321 WG-VGSNSLHLPV-----PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS  369 (904)
T ss_pred             Ee-ccCCcccccC-----cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence            11 1111122222     3568999999999999999999999999999998544

>KOG0592|consensus

Probab=100.00  E-value=2.5e-46  Score=359.36  Aligned_cols=247  Identities=24%  Similarity=0.413  Sum_probs=206.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc------CccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~------~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|.+++.||+|+|++|++|+.  +++.+|||++.++      ...-...|++++.... .||.|++|+-.|.+..    
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-~hPgivkLy~TFQD~~----  147 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-GHPGIVKLYFTFQDEE----  147 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-CCCCeEEEEEEeeccc----
Confidence            6899999999999999999987  6899999987543      2333455777777632 9999999999998884    


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|+|+||+++|+|.+++++ +.|++.....++.+|+.||+|||++        |||||||||+|||||.++++||+|||
T Consensus       148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~--------GIIHRDlKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN--------GIIHRDLKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc--------CceeccCChhheeEcCCCcEEEeecc
Confidence            48999999999999999976 7899999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCc---------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        287 LAVSYSQLSNK---------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       287 la~~~~~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      .|+.+......         .......++||..|.+||++..+      ..++.+|+|+|||+||+|+.|          
T Consensus       220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------~~~~~sDiWAlGCilyQmlaG----------  283 (604)
T KOG0592|consen  220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------PAGPSSDLWALGCILYQMLAG----------  283 (604)
T ss_pred             ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC------CCCcccchHHHHHHHHHHhcC----------
Confidence            99988754332         11112558999999999999988      667899999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..||...    ...-.+++++..+..   +|     ...++.+.+|+++.|..||.+|+|..+|.+
T Consensus       284 ~PPFra~----NeyliFqkI~~l~y~---fp-----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  284 QPPFRAA----NEYLIFQKIQALDYE---FP-----EGFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             CCCCccc----cHHHHHHHHHHhccc---CC-----CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence            7788764    233445555544332   33     235578999999999999999999988765

>KOG1094|consensus

Probab=100.00  E-value=2.2e-46  Score=361.25  Aligned_cols=267  Identities=25%  Similarity=0.350  Sum_probs=209.9

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEECC-ceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVWHG-ENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++-.++...+.++||+|-||+|.+++..+ ..||||+++......  ..+..||..+.+++|||||+++|+|..+++   
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP---  609 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP---  609 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc---
Confidence            34455678899999999999999999876 899999997655443  344577777888999999999999999876   


Q ss_pred             EEEeeecccCcccHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~---l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       +++|+|||++|+|.+|+....   +......+|+.|||+||+||.+.        ++|||||.++|||++.++++||+|
T Consensus       610 -icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~--------nfVHrd~a~rNcLv~~e~~iKiad  680 (807)
T KOG1094|consen  610 -LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL--------NFVHRDLATRNCLVDGEFTIKIAD  680 (807)
T ss_pred             -hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh--------chhhccccccceeecCcccEEecC
Confidence             689999999999999997642   35566788999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+......  ......+-.++|||||.+.-+      ++|++||||+||+++||+++-+.        +.||.+.
T Consensus       681 fgmsR~lysg~yy--~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~--------e~Py~~l  744 (807)
T KOG1094|consen  681 FGMSRNLYSGDYY--RVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCR--------EQPYSQL  744 (807)
T ss_pred             cccccccccCCce--eeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHh--------hCchhhh
Confidence            9999865533221  122334566899999999887      88899999999999999987644        6788876


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ...+ ..+.. ..+..++.+...+.  .+.-|+..++++|.+||..|-++|||++++...|++..
T Consensus       745 t~e~-vven~-~~~~~~~~~~~~l~--~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  745 TDEQ-VVENA-GEFFRDQGRQVVLS--RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             hHHH-HHHhh-hhhcCCCCcceecc--CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence            3211 01111 11222222222111  23558899999999999999999999999999998765

>KOG0598|consensus

Probab=100.00  E-value=2.4e-46  Score=346.02  Aligned_cols=236  Identities=28%  Similarity=0.400  Sum_probs=193.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.++||+|+||+||.++.  +++.+|+|++++..-      .....|+.|+.  .++||.||+++-.|++.    .
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~--~v~hPFiv~l~ysFQt~----~   98 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILS--KIKHPFIVKLIYSFQTE----E   98 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHH--hCCCCcEeeeEEecccC----C
Confidence            7899999999999999999987  689999998865422      22333445544  49999999999999888    4


Q ss_pred             EEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|||+||+.||+|..+|+ ++.+++..+..++.+|+.||.|||+.        +||||||||+|||||.+|+++|+|||
T Consensus        99 kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~--------gIiyRDlKPENILLd~~GHi~LtDFg  170 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK--------GIIYRDLKPENILLDEQGHIKLTDFG  170 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC--------CeeeccCCHHHeeecCCCcEEEeccc
Confidence            6899999999999999997 46799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++..-....    ...+++||+.|||||++.+.      .|+..+|+||+|+++|||++|          ..||...  
T Consensus       171 L~k~~~~~~~----~t~tfcGT~eYmAPEil~~~------gy~~~vDWWsLGillYeML~G----------~pPF~~~--  228 (357)
T KOG0598|consen  171 LCKEDLKDGD----ATRTFCGTPEYMAPEILLGK------GYDKAVDWWSLGILLYEMLTG----------KPPFYAE--  228 (357)
T ss_pred             cchhcccCCC----ccccccCCccccChHHHhcC------CCCcccchHhHHHHHHHHhhC----------CCCCcCc--
Confidence            9975443322    23568999999999999987      788999999999999999999          7777764  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL  416 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  416 (443)
                         +...+.+.+.... .+..|.     -.+.+.++++++.|..||++|.
T Consensus       229 ---~~~~~~~~I~~~k-~~~~p~-----~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  229 ---DVKKMYDKILKGK-LPLPPG-----YLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             ---cHHHHHHHHhcCc-CCCCCc-----cCCHHHHHHHHHHhccCHHHhc
Confidence               3334444333221 122222     2446799999999999999996

>KOG0582|consensus

Probab=100.00  E-value=5.4e-46  Score=349.43  Aligned_cols=255  Identities=27%  Similarity=0.394  Sum_probs=203.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch--HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW--SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~--~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.|++.+.||.|.-++||+|++  .++.||||++........  ...+|+..+..++||||++++..|..+    ..+|+
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~----~~LWv  101 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD----SELWV  101 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec----ceeEE
Confidence            7899999999999999999998  689999999965433222  223566666669999999999999887    45899


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||.||.+||+.+.++.   ..+++..+..|++++++||.|||.+        |.||||||+.||||+++|.+||+|||.+
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~--------G~IHRdvKAgnILi~~dG~VkLadFgvs  173 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN--------GHIHRDVKAGNILIDSDGTVKLADFGVS  173 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc--------CceecccccccEEEcCCCcEEEcCceee
Confidence            9999999999999964   5799999999999999999999999        9999999999999999999999999988


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+.............++||+.|||||++..+..    .|+.|+||||||++..||++|          ..||.+..+..
T Consensus       174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~----GYdfKaDIwSfGITA~ELA~G----------~aPf~k~pPmk  239 (516)
T KOG0582|consen  174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLH----GYDFKADIWSFGITACELAHG----------HAPFSKYPPMK  239 (516)
T ss_pred             eeecccCceeeEeeccccCcccccChHHhhhccc----CccchhhhhhhhHHHHHHhcC----------CCCcccCChHH
Confidence            7665544332222267799999999999766543    788999999999999999999          88888865432


Q ss_pred             CChHHHHhhhhhcCCCCCCCCC-C----CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNR-W----VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .       ....-+..|+.+.. .    .....+..+++++..||+.||.+|||+.++++
T Consensus       240 v-------Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  240 V-------LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             H-------HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            1       11111222221111 0    11234567999999999999999999999886

>KOG0198|consensus

Probab=100.00  E-value=4.2e-46  Score=349.97  Aligned_cols=259  Identities=28%  Similarity=0.413  Sum_probs=203.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .++...+.||+|+||.||++..  +|...|||.+...+.. ....+.|+..+..++|||||+++|.......  ..+++.
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i~   94 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN--DEYNIF   94 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC--eeeEee
Confidence            4678899999999999999998  3799999987554222 2234677777778999999999998555443  368999


Q ss_pred             ecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++.+.  .+++..+..++.||++||+|||++        +||||||||+|||++. ++.+||+|||+++
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~--------g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK--------GIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeccCcccceEEEeCCCCeEEeccCcccc
Confidence            9999999999999764  599999999999999999999999        9999999999999999 7999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .... ............||+.|||||++..+.     ....++|||||||++.||+||          ..||.+.   ..
T Consensus       167 ~~~~-~~~~~~~~~~~~Gtp~~maPEvi~~g~-----~~~~~sDiWSlGCtVvEM~Tg----------~~PW~~~---~~  227 (313)
T KOG0198|consen  167 KLES-KGTKSDSELSVQGTPNYMAPEVIRNGE-----VARRESDIWSLGCTVVEMLTG----------KPPWSEF---FE  227 (313)
T ss_pred             cccc-ccccccccccccCCccccCchhhcCCC-----cCCccchhhhcCCEEEeccCC----------CCcchhh---cc
Confidence            7664 111122234568999999999998531     222589999999999999999          6677663   01


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ....+..+. .....|.+|     ...+.+.++++.+|+..||++||||.++++..-...
T Consensus       228 ~~~~~~~ig-~~~~~P~ip-----~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  228 EAEALLLIG-REDSLPEIP-----DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             hHHHHHHHh-ccCCCCCCC-----cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            112222222 222334444     347788999999999999999999999998765443

>KOG0193|consensus

Probab=100.00  E-value=3.1e-46  Score=362.72  Aligned_cols=274  Identities=28%  Similarity=0.427  Sum_probs=217.5

Q ss_pred             HHHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       129 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ...++..+.+.+.+.||+|+||+||+|.|.| .||||++.-...   +...+..|+..+++-+|.||+-|.|+|..+.  
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--  461 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--  461 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc--
Confidence            3445566778899999999999999999987 589999865433   2334457888888899999999999998773  


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                         +.||+.+|++-+|+.+++.  ..|...+...|+.|||+||.|||.+        +|||||||..||++.++++|||+
T Consensus       462 ---~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK--------~IIHrDLKSnNIFl~~~~kVkIg  530 (678)
T KOG0193|consen  462 ---LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK--------NIIHRDLKSNNIFLHEDLKVKIG  530 (678)
T ss_pred             ---eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh--------hhhhhhccccceEEccCCcEEEe
Confidence               3899999999999999974  5799999999999999999999999        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++..-..-....  ......|...|||||+++...   ..+|++.+||||||+|+|||+||          ..||..
T Consensus       531 DFGLatvk~~w~g~~--q~~qp~gsilwmAPEvIRmqd---~nPfS~qSDVYaFGiV~YELltg----------~lPysi  595 (678)
T KOG0193|consen  531 DFGLATVKTRWSGEQ--QLEQPHGSLLWMAPEVIRMQD---DNPFSFQSDVYAFGIVWYELLTG----------ELPYSI  595 (678)
T ss_pred             cccceeeeeeecccc--ccCCCccchhhhcHHHHhhcc---cCCCCcccchhhhhHHHHHHHhC----------cCCcCC
Confidence            999985433221111  123346888999999998553   23899999999999999999999          888873


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccccccCC
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCS  438 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~~~  438 (443)
                      ..     .+.+.-.+......+....  ....+++++++|+..||..++++||.+.+|+..|+.+....+++.-+
T Consensus       596 ~~-----~dqIifmVGrG~l~pd~s~--~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS  663 (678)
T KOG0193|consen  596 QN-----RDQIIFMVGRGYLMPDLSK--IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRS  663 (678)
T ss_pred             CC-----hhheEEEecccccCccchh--hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccC
Confidence            21     1222222222222222221  23568999999999999999999999999999999999877776643

>KOG1095|consensus

Probab=100.00  E-value=7.8e-46  Score=387.07  Aligned_cols=263  Identities=23%  Similarity=0.363  Sum_probs=208.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE---CCc----eeEEEEeeccC--ccchHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW---HGE----NVAVKIFFSRD--EASWSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~---~~~----~vAvK~~~~~~--~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      ..++.++.+.||+|.||.||+|.+   +|.    .||||.+....  .+...+-.|...+..++|||||+++|++.+..+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            346788899999999999999998   243    48888876542  222333455666666999999999999998644


Q ss_pred             cccEEEeeecccCcccHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT--------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~--------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                          .+|++|||++|||..||++.        .++..+.+.++.|||+|+.||+++        ++|||||.++||||+.
T Consensus       770 ----~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~--------~fvHRDLAaRNCLL~~  837 (1025)
T KOG1095|consen  770 ----PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK--------HFVHRDLAARNCLLDE  837 (1025)
T ss_pred             ----cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC--------CCcCcchhhhheeecc
Confidence                68999999999999999753        589999999999999999999999        8899999999999999


Q ss_pred             CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                      ...+||+|||+|+.+.........  ....-...|||||.+..+      .+|.|+|||||||+|||++|.         
T Consensus       838 ~r~VKIaDFGlArDiy~~~yyr~~--~~a~lPvkWm~PEsl~d~------iFtskSDvWsFGVllWEifsl---------  900 (1025)
T KOG1095|consen  838 RRVVKIADFGLARDIYDKDYYRKH--GEAMLPVKWMPPESLKDG------IFTSKSDVWSFGVLLWEIFSL---------  900 (1025)
T ss_pred             cCcEEEcccchhHhhhhchheecc--CccccceecCCHHHHhhc------ccccccchhhhHHHHHHHHhC---------
Confidence            999999999999965543222111  111234689999999987      778999999999999999996         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                      +..||.+..     ..++...+.... +...|     ..|++.++++|.+||+.+|++||++..|++++..+.+.....+
T Consensus       901 G~~PY~~~~-----n~~v~~~~~~gg-RL~~P-----~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~  969 (1025)
T KOG1095|consen  901 GATPYPSRS-----NFEVLLDVLEGG-RLDPP-----SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTI  969 (1025)
T ss_pred             CCCCCCCcc-----hHHHHHHHHhCC-ccCCC-----CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCc
Confidence            488988752     233333333333 44333     4589999999999999999999999999999999887665443

>KOG0593|consensus

Probab=100.00  E-value=4.4e-46  Score=334.14  Aligned_cols=252  Identities=25%  Similarity=0.367  Sum_probs=195.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH---HHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR---ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~---e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.|+...++|+|+||+||+++.  +|+.||||++..+.++...+   .+||..+++++|+|+|.++.+|...    ..++
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk----rklh   77 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK----RKLH   77 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc----ceeE
Confidence            4677888999999999999987  69999999997766544333   4788888889999999999999877    5689


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||+|||+. ++.+-|.+  .+++.+.+..++.|++.|+.|+|++        ++|||||||+||||+.++.+||+|||+|
T Consensus        78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~--------n~IHRDIKPENILit~~gvvKLCDFGFA  148 (396)
T KOG0593|consen   78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN--------NCIHRDIKPENILITQNGVVKLCDFGFA  148 (396)
T ss_pred             EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc--------CeecccCChhheEEecCCcEEeccchhh
Confidence            99999987 66666653  6799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+.......    +..+.|.+|+|||++.+..     +|++.+||||.||++.||++|.+          -|.+.    
T Consensus       149 R~L~~pgd~Y----TDYVATRWYRaPELLvGDt-----qYG~pVDiWAiGCv~aEl~~G~p----------L~PG~----  205 (396)
T KOG0593|consen  149 RTLSAPGDNY----TDYVATRWYRAPELLVGDT-----QYGKPVDIWAIGCVFAELLTGEP----------LWPGR----  205 (396)
T ss_pred             HhhcCCcchh----hhhhhhhhccChhhhcccC-----cCCCcccchhhhHHHHHHhcCCc----------CCCCc----
Confidence            9887533222    4458899999999999862     77799999999999999999943          33332    


Q ss_pred             CChHHHHhhhhhcC-----------CCC-----CCCC--CCC-----CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQ-----------QRP-----VLPN--RWV-----SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~-----------~~~-----~~~~--~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+.+.+..+...-+           ..+     .+|.  ...     -...+..+.++++.||+.||.+|++.+|++.
T Consensus       206 SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  206 SDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             chHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            12222211111000           000     0110  000     0124457899999999999999999999874

>KOG0578|consensus

Probab=100.00  E-value=1.9e-45  Score=356.05  Aligned_cols=248  Identities=29%  Similarity=0.459  Sum_probs=208.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ...|..-++||+|+.|.||.|..  +++.||||++........ ..-.|+..++..+|+|||.+++.|...    .++|+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~----deLWV  347 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG----DELWV  347 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc----ceeEE
Confidence            35688889999999999999986  688999999876554332 234677777779999999999998877    45899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||||++|+|.+.+....+++.++..|+++++.||+|||.+        +|+|||||.+|||++.+|.+||+|||++..+
T Consensus       348 VMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~--------gIiHrDIKSDnILL~~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  348 VMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR--------GIIHRDIKSDNILLTMDGSVKLTDFGFCAQI  419 (550)
T ss_pred             EEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc--------ceeeeccccceeEeccCCcEEEeeeeeeecc
Confidence            99999999999999988999999999999999999999999        9999999999999999999999999999887


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....+    ..+.+||+.|||||++...      .|++|.||||||++++||+-|          +.||....+    .
T Consensus       420 ~~~~~K----R~TmVGTPYWMAPEVvtrk------~YG~KVDIWSLGIMaIEMveG----------EPPYlnE~P----l  475 (550)
T KOG0578|consen  420 SEEQSK----RSTMVGTPYWMAPEVVTRK------PYGPKVDIWSLGIMAIEMVEG----------EPPYLNENP----L  475 (550)
T ss_pred             ccccCc----cccccCCCCccchhhhhhc------ccCccccchhhhhHHHHHhcC----------CCCccCCCh----H
Confidence            765443    3567999999999999887      788999999999999999999          778765221    1


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+..+  .....|.+..   .+..+..+++++.+||+.|+++|+|+.|+|+
T Consensus       476 rAlyLI--a~ng~P~lk~---~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  476 RALYLI--ATNGTPKLKN---PEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHHHH--hhcCCCCcCC---ccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            222222  2233444443   3567889999999999999999999999987

>KOG0659|consensus

Probab=100.00  E-value=5.7e-45  Score=321.75  Aligned_cols=263  Identities=26%  Similarity=0.318  Sum_probs=206.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .+|...++||+|.||.||+|+.  +|+.||||.++..+..   ....-+||..++.++|+||+.++++|-...+    +.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~----l~   77 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSN----LS   77 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCc----eE
Confidence            4688889999999999999998  6999999998765433   3444677888888999999999999987754    78


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||+|||+. ||...++.  ..++..++..++.++++||+|||++        .|+||||||.|+|++++|.+||+|||+|
T Consensus        78 lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~--------~IlHRDlKPnNLLis~~g~lKiADFGLA  148 (318)
T KOG0659|consen   78 LVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK--------WILHRDLKPNNLLISSDGQLKIADFGLA  148 (318)
T ss_pred             EEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh--------hhhcccCCccceEEcCCCcEEeecccch
Confidence            99999996 99999976  4589999999999999999999999        8999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------cccccC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFEEYK  358 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~~~~  358 (443)
                      +.+.......    ...+-|.+|+|||++.+..     .|+...|+||.||++.||+.|.+.+-          +|....
T Consensus       149 r~f~~p~~~~----~~~V~TRWYRAPELLfGsr-----~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG  219 (318)
T KOG0659|consen  149 RFFGSPNRIQ----THQVVTRWYRAPELLFGSR-----QYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG  219 (318)
T ss_pred             hccCCCCccc----ccceeeeeccChHHhccch-----hcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC
Confidence            9887644332    3337899999999999874     56689999999999999999876431          344455


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .|-.+.+++-....+..+..    ..|..+....-..+++.+.+|+.++|..||.+|+|+.|+++.
T Consensus       220 TP~~~~WP~~~~lpdY~~~~----~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  220 TPTPDQWPEMTSLPDYVKIQ----QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             CCCcccCccccccccHHHHh----cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            55555444332222222221    112212111113356678999999999999999999998864

>KOG0600|consensus

Probab=100.00  E-value=1e-45  Score=352.34  Aligned_cols=263  Identities=26%  Similarity=0.324  Sum_probs=202.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.|+.+++||+|+||.||+|+.  +|+.||+|++....+.   -...-+||.++++|+||||++|.+...+...  ..+
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~--~si  193 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS--GSI  193 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC--ceE
Confidence            36789999999999999999998  7999999988654422   2333578888888999999999999877633  468


Q ss_pred             EeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      |||+|||+. ||..++...  .|++.++..++.|++.||+|+|++        +|+|||||.+|||||.+|.+||+||||
T Consensus       194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~--------gvlHRDIK~SNiLidn~G~LKiaDFGL  264 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR--------GVLHRDIKGSNILIDNNGVLKIADFGL  264 (560)
T ss_pred             EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc--------CeeeccccccceEEcCCCCEEeccccc
Confidence            999999997 999999764  799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------ccccc
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFEEY  357 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~~~  357 (443)
                      |+++.......   .+..+-|.+|.|||++.+..     .|+.+.|+||.||||.||++|++.+.          +|...
T Consensus       265 Ar~y~~~~~~~---~T~rVvTLWYRpPELLLG~t-----~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklc  336 (560)
T KOG0600|consen  265 ARFYTPSGSAP---YTSRVVTLWYRPPELLLGAT-----SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLC  336 (560)
T ss_pred             eeeccCCCCcc---cccceEEeeccChHHhcCCc-----ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHh
Confidence            99887654332   46678999999999999873     77799999999999999999976432          22222


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCC--CCC--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLP--NRW--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..|-.+.++..       ++-.....++..+  ...  .-...+....+|+..+|..||.+|.|+.++++
T Consensus       337 GSP~e~~W~~~-------kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  337 GSPTEDYWPVS-------KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCCChhccccc-------cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            33322211100       0000000011110  000  01224567889999999999999999999875

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-44  Score=343.74  Aligned_cols=251  Identities=21%  Similarity=0.306  Sum_probs=200.8

Q ss_pred             ceeeeecCeEEEEEEECCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        142 ECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ..||+|++|.||+|.++|+.||||.+.......    ...+.|+..+..++||||++++|++.+.......+++||||++
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            679999999999999999999999886543322    2334677777779999999999998763222246899999999


Q ss_pred             cccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        218 FGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       218 ~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      +|+|.+++.+ ..+++.....++.|++.||.|||+..       +++||||||+|||+++++.+||+|||+++...... 
T Consensus       106 ~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-------~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-  177 (283)
T PHA02988        106 RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT-------NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-  177 (283)
T ss_pred             CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC-------CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence            9999999965 56899999999999999999999741       77899999999999999999999999987654321 


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                            ....||..|+|||++.+...    .++.++|||||||++|||++|          ..||...     ....+..
T Consensus       178 ------~~~~~~~~y~aPE~~~~~~~----~~~~k~Di~SlGvil~el~~g----------~~Pf~~~-----~~~~~~~  232 (283)
T PHA02988        178 ------FKNVNFMVYFSYKMLNDIFS----EYTIKDDIYSLGVVLWEIFTG----------KIPFENL-----TTKEIYD  232 (283)
T ss_pred             ------ccccCcccccCHHHhhhccc----cccchhhhhHHHHHHHHHHHC----------CCCCCCC-----CHHHHHH
Confidence                  23468899999999875211    677899999999999999999          7788654     2233333


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      .+.....++.++     ..++..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus       233 ~i~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        233 LIINKNNSLKLP-----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHhcCCCCCCC-----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            333333344433     2367889999999999999999999999999998764

>KOG0661|consensus

Probab=100.00  E-value=7.1e-46  Score=351.09  Aligned_cols=264  Identities=23%  Similarity=0.319  Sum_probs=204.6

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC--ccchHHHHHHHHHHhcc-CCCceeeeeeccccCCccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD--EASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~--~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+.++|.+.++||.|+||.||+|+.  +|..||||.++.+-  -++..+-+|+..+++++ |||||++.+++.+.+.   
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~---   83 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR---   83 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc---
Confidence            3457899999999999999999987  68999999886543  33445568899999999 9999999999988753   


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++|||||+. +|++++++  ..+++..+..|+.||++||+|+|.+        |+.|||+||+|||+..+..+||+||
T Consensus        84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~--------GfFHRDlKPENiLi~~~~~iKiaDF  154 (538)
T KOG0661|consen   84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH--------GFFHRDLKPENILISGNDVIKIADF  154 (538)
T ss_pred             eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc--------CcccccCChhheEecccceeEeccc
Confidence            68999999986 99999964  5699999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------ccc
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFE  355 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~  355 (443)
                      |+|+.+....     +.+..+.|.+|+|||++....     .|+.+.|+||+|||++|+.+-++.+-          +.+
T Consensus       155 GLARev~Skp-----PYTeYVSTRWYRAPEvLLrs~-----~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~  224 (538)
T KOG0661|consen  155 GLAREVRSKP-----PYTEYVSTRWYRAPEVLLRSG-----YYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE  224 (538)
T ss_pred             ccccccccCC-----CcchhhhcccccchHHhhhcc-----ccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH
Confidence            9998776432     335568999999999998763     66789999999999999999865431          111


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCC----CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR----WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ..+.|-.+..+..   ..+...+  ...-|..+..    .. ..++.++.+||.+|+.+||.+|||+.|+++.
T Consensus       225 VLGtP~~~~~~eg---~~La~~m--nf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  225 VLGTPDKDSWPEG---YNLASAM--NFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HhCCCccccchhH---HHHHHHh--ccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            2233322211110   1111111  1111222111    11 2367889999999999999999999999873

>KOG0194|consensus

Probab=100.00  E-value=3.8e-45  Score=358.36  Aligned_cols=261  Identities=29%  Similarity=0.441  Sum_probs=209.2

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC---C--ce-eEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH---G--EN-VAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~---~--~~-vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      ...++..+.++||+|+||.||+|.+.   +  .. ||||..+...    .+....-.|...+.+++|||||+++|++...
T Consensus       154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~  233 (474)
T KOG0194|consen  154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE  233 (474)
T ss_pred             EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence            34467788899999999999999882   2  23 8999876422    1112222444455559999999999999888


Q ss_pred             CCcccEEEeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                      .+    +++|||+|.+|+|.++|++.  .++..+.+.++.++|.||+|||+.        ++|||||.++|||++.++.+
T Consensus       234 ~P----l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k--------~~IHRDIAARNcL~~~~~~v  301 (474)
T KOG0194|consen  234 EP----LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK--------NCIHRDIAARNCLYSKKGVV  301 (474)
T ss_pred             Cc----cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC--------CCcchhHhHHHheecCCCeE
Confidence            55    79999999999999999864  499999999999999999999999        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||+++.-......    .....-...|+|||.+...      .+++++|||||||++||+++.         +..|
T Consensus       302 KISDFGLs~~~~~~~~~----~~~~klPirWLAPEtl~~~------~~s~kTDV~sfGV~~~Eif~~---------g~~P  362 (474)
T KOG0194|consen  302 KISDFGLSRAGSQYVMK----KFLKKLPIRWLAPETLNTG------IFSFKTDVWSFGVLLWEIFEN---------GAEP  362 (474)
T ss_pred             EeCccccccCCcceeec----cccccCcceecChhhhccC------ccccccchhheeeeEEeeecc---------CCCC
Confidence            99999998654311111    1111345789999999987      777999999999999999873         2668


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      |.+.     ...+++..+.....+...|.     ..+.++..++.+||..||++||||.++.+.|+.+......
T Consensus       363 y~g~-----~~~~v~~kI~~~~~r~~~~~-----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  363 YPGM-----KNYEVKAKIVKNGYRMPIPS-----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             CCCC-----CHHHHHHHHHhcCccCCCCC-----CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            8886     44566666655566665553     4788899999999999999999999999999999887654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.1e-44  Score=352.19  Aligned_cols=258  Identities=21%  Similarity=0.398  Sum_probs=197.3

Q ss_pred             hccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+|.+       +++.||||++......  ......|+..+..+ +||||+++++++.... 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN-   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence            36899999999999999999975       2467999988643221  12233455555556 8999999999886543 


Q ss_pred             cccEEEeeecccCcccHHHHhcc---------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR---------------------------------------------------------  227 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~---------------------------------------------------------  227 (443)
                        ..+++||||+++|+|.+++..                                                         
T Consensus        85 --~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (338)
T cd05102          85 --GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE  162 (338)
T ss_pred             --CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence              347899999999999998853                                                         


Q ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCC
Q psy14889        228 ------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP  301 (443)
Q Consensus       228 ------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~  301 (443)
                            ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++.........  .
T Consensus       163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~--~  232 (338)
T cd05102         163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR--------KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV--R  232 (338)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHHHHHHC--------CEECCCCccceEEEcCCCcEEEeecccccccccCcchh--c
Confidence                  2377888999999999999999998        99999999999999999999999999997654322111  1


Q ss_pred             CCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhh
Q psy14889        302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICI  380 (443)
Q Consensus       302 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~  380 (443)
                      .....++..|+|||++.+.      .++.++|||||||++|||++ |          ..||.+...    .+.+...+. 
T Consensus       233 ~~~~~~~~~y~aPE~~~~~------~~~~~sDiwslG~il~el~~~g----------~~pf~~~~~----~~~~~~~~~-  291 (338)
T cd05102         233 KGSARLPLKWMAPESIFDK------VYTTQSDVWSFGVLLWEIFSLG----------ASPYPGVQI----NEEFCQRLK-  291 (338)
T ss_pred             ccCCCCCccccCcHHhhcC------CCCcccCHHHHHHHHHHHHhCC----------CCCCCCCCc----cHHHHHHHh-
Confidence            1233567789999999766      67789999999999999997 7          667765321    122222221 


Q ss_pred             cCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        381 DQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ....+..+     ..++..+.+|+.+||+.||++|||+.|+++.|+++...
T Consensus       292 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         292 DGTRMRAP-----ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             cCCCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            12222222     33567899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0663|consensus

Probab=100.00  E-value=5e-45  Score=331.43  Aligned_cols=268  Identities=24%  Similarity=0.308  Sum_probs=207.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.|+..+.|++|+||.||+|+.  +++.||+|+++-..+.   ....-+||..+.+.+|||||.+..+.....-  ..+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~--d~iy  153 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM--DKIY  153 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc--ceee
Confidence            6799999999999999999998  6899999998654332   2333567777777999999999988776544  4589


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||||+. ||...+..  +++...++..++.|+++|++|||.+        .|+|||||++|+|++..|.+||+|||+|
T Consensus       154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~--------wilHRDLK~SNLLm~~~G~lKiaDFGLA  224 (419)
T KOG0663|consen  154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN--------WILHRDLKTSNLLLSHKGILKIADFGLA  224 (419)
T ss_pred             eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc--------eeEecccchhheeeccCCcEEecccchh
Confidence            99999997 99999974  6799999999999999999999999        8999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------cccccC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFEEYK  358 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~~~~  358 (443)
                      +.+......    .+..+-|.+|+|||++.+..     .|+++.|+||+|||+.||+++++.+.          +|....
T Consensus       225 R~ygsp~k~----~T~lVVTLWYRaPELLLG~~-----tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llG  295 (419)
T KOG0663|consen  225 REYGSPLKP----YTPLVVTLWYRAPELLLGAK-----TYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLG  295 (419)
T ss_pred             hhhcCCccc----CcceEEEeeecCHHHhcCCc-----ccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhC
Confidence            988765433    35668899999999999874     67789999999999999999987542          444555


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .|-...++.-.......+.-........+...+.....++.-.+|+..+|.+||.+|.|+.|.++
T Consensus       296 tPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  296 TPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             CCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            66555544332222221111111111111111111224567899999999999999999999876

>KOG0201|consensus

Probab=100.00  E-value=3e-45  Score=344.22  Aligned_cols=245  Identities=30%  Similarity=0.464  Sum_probs=203.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..|+..+.||+|+||.||+|..  +++.||+|++.......  ...+.|+..+..++++||.++||.+..+    ..+|+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g----~~Lwi   88 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG----TKLWI   88 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec----ccHHH
Confidence            4677789999999999999998  58999999986543222  2234566667779999999999999887    45899


Q ss_pred             eecccCcccHHHHhcccCC-CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTL-NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l-~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||||.+|++.+.|+...+ .+..+.-+++++..||.|||++        +.+|||||+.|||+..+|.+||+|||.+..
T Consensus        89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~--------~kiHrDIKaanil~s~~g~vkl~DfgVa~q  160 (467)
T KOG0201|consen   89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE--------KKIHRDIKAANILLSESGDVKLADFGVAGQ  160 (467)
T ss_pred             HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc--------ceecccccccceeEeccCcEEEEecceeee
Confidence            9999999999999987665 8999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      +......    ..+++||+.|||||++...      .|+.|+||||||++.+||++|          ..||.+..++   
T Consensus       161 l~~~~~r----r~tfvGTPfwMAPEVI~~~------~Y~~KADIWSLGITaiEla~G----------ePP~s~~hPm---  217 (467)
T KOG0201|consen  161 LTNTVKR----RKTFVGTPFWMAPEVIKQS------GYDTKADIWSLGITAIELAKG----------EPPHSKLHPM---  217 (467)
T ss_pred             eechhhc----cccccccccccchhhhccc------cccchhhhhhhhHHHHHHhcC----------CCCCcccCcc---
Confidence            7654333    2678999999999999965      777999999999999999999          7888887553   


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          +-++.+....|+.-    ...++..+++++..||+.||+.||||.++++
T Consensus       218 ----rvlflIpk~~PP~L----~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  218 ----RVLFLIPKSAPPRL----DGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             ----eEEEeccCCCCCcc----ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence                22222222222221    2356778999999999999999999999886

>KOG0583|consensus

Probab=100.00  E-value=2.6e-43  Score=343.77  Aligned_cols=252  Identities=24%  Similarity=0.377  Sum_probs=203.0

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeecc----Cc--cchHHHHHHHHHHhcc-CCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR----DE--ASWSRETEIYSTVLLR-HENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~----~~--~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~  205 (443)
                      .+.|.+.+.||+|+||.|+.|..  ++..||+|++...    ..  ......+|+..+..++ ||||++++.++...   
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~---   92 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP---   92 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC---
Confidence            47899999999999999999987  6899999976543    11  1122235666666688 99999999999887   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~  283 (443)
                       ..+++||||+.+|+|.+++.+ +++.+..+..++.|+++|++|+|+.        +|+||||||+|||++.+ +.+||+
T Consensus        93 -~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~--------gi~HRDLK~ENilld~~~~~~Kl~  163 (370)
T KOG0583|consen   93 -TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR--------GIVHRDLKPENILLDGNEGNLKLS  163 (370)
T ss_pred             -CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC--------CEeeCCCCHHHEEecCCCCCEEEe
Confidence             458999999999999999976 7899999999999999999999999        99999999999999999 999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++.....    .+....+.+||+.|+|||++.+...+.    +.++||||+||+||-|++|          ..||.+
T Consensus       164 DFG~s~~~~~----~~~~l~t~cGsp~Y~aPEvl~~~~~Y~----g~~aDvWS~GViLy~ml~G----------~~PF~d  225 (370)
T KOG0583|consen  164 DFGLSAISPG----EDGLLKTFCGSPAYAAPEVLSGKGTYS----GKAADVWSLGVILYVLLCG----------RLPFDD  225 (370)
T ss_pred             ccccccccCC----CCCcccCCCCCcccCCHHHhCCCCCcC----CchhhhhhhHHHHHHHHhC----------CCCCCC
Confidence            9999987631    112235679999999999999874211    3799999999999999999          888887


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchh-HHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      .     ....+...+.  .....+|..     + +.+++.|+.+||..||.+|+|+.+|+ .-.-+.
T Consensus       226 ~-----~~~~l~~ki~--~~~~~~p~~-----~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~  279 (370)
T KOG0583|consen  226 S-----NVPNLYRKIR--KGEFKIPSY-----LLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ  279 (370)
T ss_pred             c-----cHHHHHHHHh--cCCccCCCC-----cCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence            3     2233333322  333444432     3 67899999999999999999999999 444444

>KOG0694|consensus

Probab=100.00  E-value=6.6e-44  Score=351.79  Aligned_cols=239  Identities=25%  Similarity=0.386  Sum_probs=202.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|.+.++||+|+||+|+++.+  +++.+|||++++..      .+....|+.|+.+.. +||.+++++..|.+.    
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-~HPFL~~L~~~fQT~----  441 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-RHPFLVNLFSCFQTK----  441 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-cCCeEeecccccccC----
Confidence            47899999999999999999998  57899999987642      234455888888875 899999999999988    


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++++||||+.|||+..+.+...+++..+..++..|+.||.|||++        +||+||||.+|||||.+|++||+|||
T Consensus       442 ~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~--------~IIYRDlKLdNiLLD~eGh~kiADFG  513 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN--------GIIYRDLKLDNLLLDTEGHVKIADFG  513 (694)
T ss_pred             CeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc--------CceeeecchhheEEcccCcEEecccc
Confidence            5699999999999977666778999999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.-...    ...+++++||+.|||||++.+.      .|+.++|+|||||+||||+.|          +.||.+.  
T Consensus       514 lcKe~m~~----g~~TsTfCGTpey~aPEil~e~------~Yt~aVDWW~lGVLlyeML~G----------q~PF~gd--  571 (694)
T KOG0694|consen  514 LCKEGMGQ----GDRTSTFCGTPEFLAPEVLTEQ------SYTRAVDWWGLGVLLYEMLVG----------ESPFPGD--  571 (694)
T ss_pred             cccccCCC----CCccccccCChhhcChhhhccC------cccchhhHHHHHHHHHHHHcC----------CCCCCCC--
Confidence            99754422    2234778999999999999998      889999999999999999999          8999874  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                         +.+++...+..+  .+..|     ..++.+...+|+++|..||++|.-+
T Consensus       572 ---dEee~FdsI~~d--~~~yP-----~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  572 ---DEEEVFDSIVND--EVRYP-----RFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             ---CHHHHHHHHhcC--CCCCC-----CcccHHHHHHHHHHhccCcccccCC
Confidence               345555444332  22233     3366789999999999999999965

>KOG0585|consensus

Probab=100.00  E-value=1e-43  Score=336.14  Aligned_cols=260  Identities=26%  Similarity=0.335  Sum_probs=204.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----------c-----hHHHHHHHHHHhccCCCceeeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----------S-----WSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----------~-----~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      -++|++.+.||+|.||.|-+|..  +++.||||++.+....          .     ..-..||.++++++|||||+|+.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            37899999999999999999987  6899999998543210          1     12246888888899999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                      +..+...  ..+|||+|||..|.+...=.... +++.++..+++++..||+|||.+        +||||||||+|+||++
T Consensus       176 vLDDP~s--~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q--------giiHRDIKPsNLLl~~  245 (576)
T KOG0585|consen  176 VLDDPES--DKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ--------GIIHRDIKPSNLLLSS  245 (576)
T ss_pred             eecCccc--CceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc--------CeeccccchhheEEcC
Confidence            9877665  67999999999998876554455 99999999999999999999999        9999999999999999


Q ss_pred             CCcEEEEecCCcccccccCCcC-CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc
Q psy14889        277 NGTCVIADFGLAVSYSQLSNKM-DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE  355 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~  355 (443)
                      +|++||+|||.+.......... +......+||+.|+|||++.++...  ...+.+.||||+||+||.|+.|        
T Consensus       246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~--~~~g~a~DiWalGVTLYCllfG--------  315 (576)
T KOG0585|consen  246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSF--SYSGFALDIWALGVTLYCLLFG--------  315 (576)
T ss_pred             CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCc--cccchhhhhhhhhhhHHHhhhc--------
Confidence            9999999999987664331111 1111335899999999999875322  1345789999999999999999        


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                        +.||.+..    ..+...+++..   ...+|.   ..+..+.+++||+++|.+||++|.+..+|....-
T Consensus       316 --~~PF~~~~----~~~l~~KIvn~---pL~fP~---~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  316 --QLPFFDDF----ELELFDKIVND---PLEFPE---NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             --cCCcccch----HHHHHHHHhcC---cccCCC---cccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence              88987742    33444455432   223332   1235678999999999999999999999876543

>KOG0588|consensus

Probab=100.00  E-value=1.6e-43  Score=346.60  Aligned_cols=245  Identities=23%  Similarity=0.353  Sum_probs=206.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .-|++++.||+|+-|.|.+|++  +|+.+|||++....    .....-|.||.+++.+.|||++++|+++.+.    .++
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~----~~l   87 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK----QHL   87 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC----ceE
Confidence            4588899999999999999998  79999999986542    2234457888888889999999999999877    679


Q ss_pred             EeeecccCcccHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+|.||+++|.|++++ .++++++.++.+++.||+.|+.|+|..        +|+||||||+|+|||..+.+||+|||+|
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~--------~icHRDLKpENlLLd~~~nIKIADFGMA  159 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF--------NICHRDLKPENLLLDVKNNIKIADFGMA  159 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh--------cceeccCCchhhhhhcccCEeeecccee
Confidence            9999999999999988 468899999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..-..+.-     ..+.+|++.|.|||++.+..+.+     .++||||.|||||.|+||          ..||.+.    
T Consensus       160 sLe~~gkl-----LeTSCGSPHYA~PEIV~G~pYdG-----~~sDVWSCGVILfALLtG----------~LPFdDd----  215 (786)
T KOG0588|consen  160 SLEVPGKL-----LETSCGSPHYAAPEIVSGRPYDG-----RPSDVWSCGVILFALLTG----------KLPFDDD----  215 (786)
T ss_pred             ecccCCcc-----ccccCCCcccCCchhhcCCCCCC-----CccccchhHHHHHHHHhC----------CCCCCCc----
Confidence            65544322     24558999999999999885443     699999999999999999          8888753    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       ....+...+....  ..+|     ..++.++++|+.+|+..||++|.|++||++.
T Consensus       216 -Nir~LLlKV~~G~--f~MP-----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  216 -NIRVLLLKVQRGV--FEMP-----SNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             -cHHHHHHHHHcCc--ccCC-----CcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence             3444444443322  2333     4477889999999999999999999999984

>KOG0616|consensus

Probab=100.00  E-value=2.7e-43  Score=315.57  Aligned_cols=233  Identities=23%  Similarity=0.347  Sum_probs=193.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH----HHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~----e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|+..+.||.|+||.|.+++.  +|..+|+|++..........    ..|...++.+.||.++++++.+.+.    ..+
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~----~~l  119 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN----SNL  119 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC----CeE
Confidence            6899999999999999999987  68899999986644322111    2344444458999999999999887    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|||||.++|.|..+|++ +++++..+..++.||+.||+|||+.        +|++|||||+|||||.+|.+||+|||+|
T Consensus       120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~--------~iiYRDLKPENiLlD~~G~iKitDFGFA  191 (355)
T KOG0616|consen  120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL--------DIIYRDLKPENLLLDQNGHIKITDFGFA  191 (355)
T ss_pred             EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc--------CeeeccCChHHeeeccCCcEEEEeccce
Confidence            999999999999999986 7899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +......       -+.+||+.|+|||++...      .+..++|.|||||++|||+.|          ..||.+..+  
T Consensus       192 K~v~~rT-------~TlCGTPeYLAPEii~sk------~ynkavDWWalGVLIYEMlaG----------~pPF~~~~~--  246 (355)
T KOG0616|consen  192 KRVSGRT-------WTLCGTPEYLAPEIIQSK------GYNKAVDWWALGVLIYEMLAG----------YPPFYDDNP--  246 (355)
T ss_pred             EEecCcE-------EEecCCccccChHHhhcC------CCCcchhHHHHHHHHHHHHcC----------CCCCcCCCh--
Confidence            8776532       345899999999999987      778899999999999999999          788877532  


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCC
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR  415 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  415 (443)
                        .....+++..   ...+|.     -.+..+++|+.+.|+.|-.+|
T Consensus       247 --~~iY~KI~~~---~v~fP~-----~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  247 --IQIYEKILEG---KVKFPS-----YFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             --HHHHHHHHhC---cccCCc-----ccCHHHHHHHHHHHhhhhHhh
Confidence              3444444432   333443     245679999999999999999

>KOG0597|consensus

Probab=100.00  E-value=1.1e-43  Score=341.49  Aligned_cols=243  Identities=29%  Similarity=0.453  Sum_probs=199.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|.+.+.||+|+||.||||+.  +.+.||+|.+.+.....   .....|+.++..++|||||.++++|.+.    .++|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~----~~~~   77 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS----AHLW   77 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc----ceEE
Confidence            5788899999999999999976  67899999886544333   1123455556669999999999999887    5799


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +|+||+.+ +|..+|. ++.++++.+..++.|+++||.|||+.        +|+|||+||+|||++..+++|++|||+|+
T Consensus        78 vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~--------rilhrd~kPqniLl~~~~~~KlcdFg~Ar  148 (808)
T KOG0597|consen   78 VVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN--------RILHRDMKPQNILLEKGGTLKLCDFGLAR  148 (808)
T ss_pred             EEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc--------CcccccCCcceeeecCCCceeechhhhhh
Confidence            99999986 9999996 47899999999999999999999999        99999999999999999999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .+.....    ..+...||+.|||||++.++      .|+..+|.||+||++||+++|          +.||...     
T Consensus       149 ~m~~~t~----vltsikGtPlYmAPElv~e~------pyd~~sDlWslGcilYE~~~G----------~PPF~a~-----  203 (808)
T KOG0597|consen  149 AMSTNTS----VLTSIKGTPLYMAPELVEEQ------PYDHTSDLWSLGCILYELYVG----------QPPFYAR-----  203 (808)
T ss_pred             hcccCce----eeeeccCcccccCHHHHcCC------CccchhhHHHHHHHHHHHhcC----------CCCchHH-----
Confidence            8765332    23456899999999999987      777899999999999999999          6677542     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +...+.+.+..+..++  |     ...+..+..+++..|.+||.+|.|-.+++.
T Consensus       204 si~~Lv~~I~~d~v~~--p-----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  204 SITQLVKSILKDPVKP--P-----STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHHHHhcCCCCC--c-----ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            2233333333322222  2     346778999999999999999999998875

>KOG0605|consensus

Probab=100.00  E-value=1e-42  Score=334.61  Aligned_cols=249  Identities=24%  Similarity=0.355  Sum_probs=199.0

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|+++..||+|+||.||+|+-  +|..+|+|++++...      .....|+.|+..  .++|+||+++-.|.+.+   
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~--~ds~~vVKLyYsFQD~~---  214 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE--VDSPWVVKLYYSFQDKE---  214 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh--cCCCcEEEEEEEecCCC---
Confidence            37899999999999999999986  799999999976532      233446666666  79999999999999884   


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .+||||||.+|||+..+|.+ ..|++.++..++.+++.|++-||..        |+|||||||+|+|||..|++||+||
T Consensus       215 -~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~--------gyIHRDIKPdNlLiD~~GHiKLSDF  285 (550)
T KOG0605|consen  215 -YLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL--------GYIHRDIKPDNLLIDAKGHIKLSDF  285 (550)
T ss_pred             -eeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc--------CcccccCChhheeecCCCCEeeccc
Confidence             58999999999999999964 7899999999999999999999999        9999999999999999999999999


Q ss_pred             CCccccccc---------------C---CcCCCC-------------------------CCCcccccCcccccccccccc
Q psy14889        286 GLAVSYSQL---------------S---NKMDIP-------------------------PNPRVGTKRYMSPEILDESIN  322 (443)
Q Consensus       286 Gla~~~~~~---------------~---~~~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~  322 (443)
                      ||+..+...               .   .....+                         ....+|||.|||||++.+.  
T Consensus       286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k--  363 (550)
T KOG0605|consen  286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK--  363 (550)
T ss_pred             cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC--
Confidence            998533210               0   000000                         0134799999999999988  


Q ss_pred             cCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHH
Q psy14889        323 MDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK  402 (443)
Q Consensus       323 ~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  402 (443)
                          .|+..+|+||||||+|||+.|          -.||....    ..+..++++.... ...+|..   ..++.+..+
T Consensus       364 ----gY~~~cDwWSLG~ImyEmLvG----------yPPF~s~t----p~~T~rkI~nwr~-~l~fP~~---~~~s~eA~D  421 (550)
T KOG0605|consen  364 ----GYGKECDWWSLGCIMYEMLVG----------YPPFCSET----PQETYRKIVNWRE-TLKFPEE---VDLSDEAKD  421 (550)
T ss_pred             ----CCCccccHHHHHHHHHHHHhC----------CCCCCCCC----HHHHHHHHHHHhh-hccCCCc---CcccHHHHH
Confidence                778899999999999999999          77887643    2344555554432 2333332   335688999


Q ss_pred             HHHHHhcCCcCCCCc---HHHHH
Q psy14889        403 VMKECWHQNANVRLS---ALRVK  422 (443)
Q Consensus       403 li~~cl~~dP~~Rps---~~evl  422 (443)
                      ||.+|+. ||++|.-   ++||.
T Consensus       422 LI~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  422 LITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             HHHHHhc-CHHHhcCcccHHHHh
Confidence            9999999 9999985   55544

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.7e-42  Score=341.75  Aligned_cols=254  Identities=23%  Similarity=0.409  Sum_probs=194.0

Q ss_pred             hccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+|.+       ++..||||++.......  .....|+..+..+ +||||+++++++.... 
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~-  112 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG-  112 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence            35799999999999999999974       24589999886433221  1223455555557 8999999999997764 


Q ss_pred             cccEEEeeecccCcccHHHHhccc--------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT--------------------------------------------------------  228 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------  228 (443)
                         ..++||||+++|+|.++++..                                                        
T Consensus       113 ---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         113 ---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             ---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence               469999999999999988531                                                        


Q ss_pred             --------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        229 --------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       229 --------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                                          .+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dlkp~Nill~~~~~~kl~DfG~a  261 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK--------NCIHRDLAARNILLTHGRITKICDFGLA  261 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCchhhEEEECCCcEEEecCccc
Confidence                                367888999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........  ......++..|+|||.+.+.      .++.++|||||||++|||++ |          ..||..... 
T Consensus       262 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~sDi~slG~~l~ellt~g----------~~p~~~~~~-  322 (375)
T cd05104         262 RDIRNDSNYV--VKGNARLPVKWMAPESIFNC------VYTFESDVWSYGILLWEIFSLG----------SSPYPGMPV-  322 (375)
T ss_pred             eeccCccccc--ccCCCCCCcceeChhHhcCC------CCCCCCCHHHHHHHHHHHHhcC----------CCCCCCCCc-
Confidence            7664332211  11223456789999999776      67789999999999999998 5          566655321 


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                         .....+.+.. ..++..+     ...+.++.+|+.+||+.||++|||+.||++.|++.
T Consensus       323 ---~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         323 ---DSKFYKMIKE-GYRMLSP-----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             ---hHHHHHHHHh-CccCCCC-----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence               1222232221 2222222     22456899999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0658|consensus

Probab=100.00  E-value=2.5e-43  Score=325.37  Aligned_cols=266  Identities=24%  Similarity=0.330  Sum_probs=200.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCc-ccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNS-CTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~-~~~~~lv  212 (443)
                      -.|.-.+++|+|+||.||+|..  +++.||||....+.. -..+|.+++.  .++|||||++.-+|....+. ...+.+|
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~--~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMR--KLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHH--hcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            3677889999999999999998  578999998765433 3345666665  49999999999888766554 2357799


Q ss_pred             ecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEecC
Q psy14889        213 THYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFG  286 (443)
Q Consensus       213 ~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfG  286 (443)
                      ||||+. +|.++++     +..++.-.+.-+..||.+||.|||+.        +|+||||||+|+|+|.+ |.+||+|||
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~--------~IcHRDIKPqNlLvD~~tg~LKicDFG  171 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH--------GICHRDIKPQNLLVDPDTGVLKICDFG  171 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc--------CcccCCCChheEEEcCCCCeEEeccCC
Confidence            999997 9999997     47789999999999999999999998        99999999999999987 899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      .|+.+......     .+...|..|+|||++.+..     .|+.+.||||.|||+.||+-|++.          |.+...
T Consensus       172 SAK~L~~~epn-----iSYicSRyYRaPELifga~-----~Yt~~IDiWSaGCV~aELl~g~pl----------FpG~s~  231 (364)
T KOG0658|consen  172 SAKVLVKGEPN-----ISYICSRYYRAPELIFGAT-----EYTTSIDIWSAGCVMAELLKGQPL----------FPGDSS  231 (364)
T ss_pred             cceeeccCCCc-----eeEEEeccccCHHHHcCcc-----ccCceeEEhhhhHHHHHHhcCCcc----------cCCCCH
Confidence            99988765433     3346788999999998873     777999999999999999999543          333111


Q ss_pred             CC-----------CChHHHHhhhh--hcCCCCCCCC-CC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--HHHH
Q psy14889        367 MD-----------PSFDDMRKVIC--IDQQRPVLPN-RW---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK--TLIK  427 (443)
Q Consensus       367 ~~-----------~~~~~~~~~~~--~~~~~~~~~~-~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~  427 (443)
                      .+           ++.+++..+-.  .+...+.+.. .|   .....+.++.+|+.++|.++|.+|.++.|++.  ..++
T Consensus       232 ~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  232 VDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE  311 (364)
T ss_pred             HHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence            00           11111111100  0111111111 11   33456788999999999999999999999874  4556


Q ss_pred             Hhhccc
Q psy14889        428 LACADM  433 (443)
Q Consensus       428 l~~~~~  433 (443)
                      +...+.
T Consensus       312 lr~~~~  317 (364)
T KOG0658|consen  312 LRDPNT  317 (364)
T ss_pred             hhCcCc
Confidence            655533

>KOG0660|consensus

Probab=100.00  E-value=2e-43  Score=325.41  Aligned_cols=283  Identities=25%  Similarity=0.278  Sum_probs=206.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccc-cCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMT-SRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~-~~~~~~~  208 (443)
                      ...|...+.||+|+||.|..+..  +|+.||||.+...-.   ....--+|+..++.++|+||+.+++++.. .......
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            35677789999999999999988  689999998753221   22222466667777999999999999876 3334467


Q ss_pred             EEeeecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +|+|+|+|+. ||...++.+. ++......++.|+++||.|+|+.        +|+||||||+|+|++.+..+||+|||+
T Consensus       101 vYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA--------nViHRDLKPsNll~n~~c~lKI~DFGL  171 (359)
T KOG0660|consen  101 VYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA--------NVIHRDLKPSNLLLNADCDLKICDFGL  171 (359)
T ss_pred             eEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc--------cccccccchhheeeccCCCEEeccccc
Confidence            9999999964 9999998776 99999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------ccccc
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFEEY  357 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~~~  357 (443)
                      |+.....  ......+..+.|.+|.|||++...     ..||.+.||||.||++.||++|++.|.          +....
T Consensus       172 AR~~~~~--~~~~~mTeYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l  244 (359)
T KOG0660|consen  172 ARYLDKF--FEDGFMTEYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL  244 (359)
T ss_pred             eeecccc--CcccchhcceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence            9988654  112223556889999999998655     278899999999999999999976532          01111


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--HHHHHhhcccc
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK--TLIKLACADMY  434 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~l~~~~~~  434 (443)
                      ..|-.+.. .....+..+..+......+..+-...-........+|+++||..||.+|+|++|+++  .|...+..+..
T Consensus       245 GtP~~e~l-~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE  322 (359)
T KOG0660|consen  245 GTPSEEDL-QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE  322 (359)
T ss_pred             CCCCHHHH-HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC
Confidence            22211100 000111122222222233322211111245678999999999999999999999987  46666554433

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.4e-42  Score=325.12  Aligned_cols=251  Identities=22%  Similarity=0.366  Sum_probs=197.3

Q ss_pred             ccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|.+.     +..||+|.+......  ....+.|+..+..++||||++++|++...    ..
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~   80 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG----NT   80 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC----CC
Confidence            57999999999999999999762     568999988654322  22345677777779999999999998765    34


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++.+++.++.|++.||+|||+.        +++||||||+|||++.++.+|++|||
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~--------~iiH~dikp~nili~~~~~~~l~dfg  152 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM--------GYVHKGLAAHKVLVNSDLVCKISGFR  152 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeeccccHhhEEEcCCCcEEECCCc
Confidence            7999999999999999865  4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      .+........   .......++..|+|||.+.+.      .++.++|||||||++||+++ |          ..||....
T Consensus       153 ~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~ell~~g----------~~p~~~~~  213 (266)
T cd05064         153 RLQEDKSEAI---YTTMSGKSPVLWAAPEAIQYH------HFSSASDVWSFGIVMWEVMSYG----------ERPYWDMS  213 (266)
T ss_pred             ccccccccch---hcccCCCCceeecCHHHHhhC------CccchhHHHHHHHHHHHHhcCC----------CCCcCcCC
Confidence            8754322111   111123456789999998765      67789999999999999875 7          67776542


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                           .....+.+.. ......+     ..++..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       214 -----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         214 -----GQDVIKAVED-GFRLPAP-----RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             -----HHHHHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                 2233333322 2222222     34677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2.5e-42  Score=332.41  Aligned_cols=259  Identities=24%  Similarity=0.349  Sum_probs=192.1

Q ss_pred             ccccccceeeeecCeEEEEEEEC------------------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH------------------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGY  195 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~------------------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l  195 (443)
                      ++|.+.+.||+|+||.||+|.+.                  +..||+|.+.......  .....|+..+..++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            67999999999999999999752                  2369999886543221  223355666666999999999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhccc--------------------CCCHHHHHHHHHHHHHHHHHHHHchhc
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--------------------TLNHHQMMKICLSIVNGLVHLHTEIFG  255 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--------------------~l~~~~~~~i~~qia~gL~yLH~~~~~  255 (443)
                      ++++.+..    ..++||||+++|+|.+++...                    .+++..+..++.||+.||.|||+.   
T Consensus        85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---  157 (304)
T cd05096          85 LGVCVDED----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---  157 (304)
T ss_pred             EEEEecCC----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---
Confidence            99987763    479999999999999998532                    367788999999999999999998   


Q ss_pred             CCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchH
Q psy14889        256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIY  335 (443)
Q Consensus       256 ~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvw  335 (443)
                           +|+||||||+|||++.++.+||+|||+++.+.......  ......++..|+|||++..+      .++.++|||
T Consensus       158 -----~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~  224 (304)
T cd05096         158 -----NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR--IQGRAVLPIRWMAWECILMG------KFTTASDVW  224 (304)
T ss_pred             -----CccccCcchhheEEcCCccEEECCCccceecccCceeE--ecCcCCCCccccCHHHHhcC------CCCchhhhH
Confidence                 99999999999999999999999999997654322111  11233567889999998765      667899999


Q ss_pred             HHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCC
Q psy14889        336 ALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR  415 (443)
Q Consensus       336 S~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  415 (443)
                      |||+++|||+++..        ..||....... ........... .......  ..+..++..+.+++.+||+.||++|
T Consensus       225 slG~~l~el~~~~~--------~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~R  292 (304)
T cd05096         225 AFGVTLWEILMLCK--------EQPYGELTDEQ-VIENAGEFFRD-QGRQVYL--FRPPPCPQGLYELMLQCWSRDCRER  292 (304)
T ss_pred             HHHHHHHHHHHccC--------CCCCCcCCHHH-HHHHHHHHhhh-ccccccc--cCCCCCCHHHHHHHHHHccCCchhC
Confidence            99999999997522        45666542110 01111111111 1111100  0123466789999999999999999


Q ss_pred             CcHHHHHHHHH
Q psy14889        416 LSALRVKKTLI  426 (443)
Q Consensus       416 ps~~evl~~L~  426 (443)
                      ||+.+|.+.|+
T Consensus       293 Ps~~~i~~~l~  303 (304)
T cd05096         293 PSFSDIHAFLT  303 (304)
T ss_pred             cCHHHHHHHHh
Confidence            99999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.2e-42  Score=326.88  Aligned_cols=247  Identities=30%  Similarity=0.520  Sum_probs=187.5

Q ss_pred             cccceeeeecCeEEEEEEEC------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        139 SLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .+.+.||.|.||.||+|.+.      +..|+||.+......  ......|+..+..++||||++++|++....    ..+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~----~~~   77 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE----PLF   77 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS----SEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc----ccc
Confidence            45688999999999999986      578999998553222  223345666666789999999999998543    379


Q ss_pred             eeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +|+||+++|+|.++|...   .+++.++..|+.||+.||.|||+.        +++|+||+++||++++++.+||+|||+
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~--------~iiH~~l~~~nill~~~~~~Kl~~f~~  149 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN--------NIIHGNLSPSNILLDSNGQVKLSDFGL  149 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT--------TEEEST-SGGGEEEETTTEEEEESTTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccccccc
Confidence            999999999999999764   799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........  .......+...|+|||.+...      .++.++||||||+++|||+++.         ..||.+.   
T Consensus       150 ~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~---------~~p~~~~---  209 (259)
T PF07714_consen  150 SRPISEKSKY--KNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLG---------KFPFSDY---  209 (259)
T ss_dssp             GEETTTSSSE--EESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTS---------SGTTTTS---
T ss_pred             cccccccccc--ccccccccccccccccccccc------cccccccccccccccccccccc---------ccccccc---
Confidence            9776322111  111223567789999999876      5668999999999999999941         5676654   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                        ....+...+ .+..++..+     ..++..+.+++.+||+.||++|||+.++++.|
T Consensus       210 --~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  210 --DNEEIIEKL-KQGQRLPIP-----DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             --CHHHHHHHH-HTTEETTSB-----TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             --ccccccccc-cccccceec-----cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence              233333333 233333333     33667899999999999999999999999886

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1989|consensus

Probab=100.00  E-value=1.7e-42  Score=351.75  Aligned_cols=269  Identities=25%  Similarity=0.428  Sum_probs=206.5

Q ss_pred             hccccccceeeeecCeEEEEEEE-C-CceeEEEEeeccCccchHH-HHHHHHHHhcc-CCCceeeeee-cccc--CCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-H-GENVAVKIFFSRDEASWSR-ETEIYSTVLLR-HENILGYIGS-DMTS--RNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~-~~~vAvK~~~~~~~~~~~~-e~ei~~~~~l~-H~nIv~l~g~-~~~~--~~~~~  207 (443)
                      ..++++.+.|.+|||+.||+|+. . |..+|+|++...++..... ..||..++.|. |+|||.|++. ....  .....
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            35788999999999999999998 3 4899999987765443322 35565665576 9999999993 3322  22135


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      +++|.||||.+|+|-++++.   ..|++.++++|+.|+++|+++||..      +|+|||||||.+||||+.++..||||
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~------~pPiIHRDLKiENvLls~~g~~KLCD  189 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL------KPPIIHRDLKIENVLLSADGNYKLCD  189 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC------CCccchhhhhhhheEEcCCCCEEeCc
Confidence            78999999999999999973   5699999999999999999999988      78999999999999999999999999


Q ss_pred             cCCcccccccCC-cCCC----CCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        285 FGLAVSYSQLSN-KMDI----PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       285 fGla~~~~~~~~-~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      ||.|........ ....    ..-...-|+.|+|||++.--..   ...++|+|||||||+||-|+..          ..
T Consensus       190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg---~pI~eKsDIWALGclLYkLCy~----------t~  256 (738)
T KOG1989|consen  190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSG---LPIGEKSDIWALGCLLYKLCYF----------TT  256 (738)
T ss_pred             ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcC---CCCcchhHHHHHHHHHHHHHHh----------CC
Confidence            999853322110 0000    0001246899999999864322   2778999999999999999998          77


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                      ||++.-.        ..++.....-|..      +..+..+.+||+.||+.||++||++.+|+..+.+|......+.
T Consensus       257 PFe~sg~--------laIlng~Y~~P~~------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~  319 (738)
T KOG1989|consen  257 PFEESGK--------LAILNGNYSFPPF------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP  319 (738)
T ss_pred             CcCcCcc--------eeEEeccccCCCC------ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence            8876311        1122222222333      3478899999999999999999999999999999998776554

>KOG4278|consensus

Probab=100.00  E-value=5.4e-43  Score=339.43  Aligned_cols=260  Identities=22%  Similarity=0.382  Sum_probs=210.6

Q ss_pred             hhhhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +..+.++.+..+||-|.||.||.|.|+  .-.||||.++.+...-..+..|...++.++|||+|+|+|+|....+    +
T Consensus       263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP----F  338 (1157)
T KOG4278|consen  263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP----F  338 (1157)
T ss_pred             hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC----e
Confidence            334467888899999999999999994  6789999987665443334445555555999999999999987744    7


Q ss_pred             EeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        210 WLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      |||+|||.+|+|.+||++   ..++.-.++.++.||++||+||..+        ++|||||.++|||+.++..+||+|||
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk--------nFIHRDLAARNCLVgEnhiVKvADFG  410 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK--------NFIHRDLAARNCLVGENHIVKVADFG  410 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh--------hhhhhhhhhhhccccccceEEeeccc
Confidence            999999999999999974   5577788899999999999999988        88999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      |++.+..+.....   ....-.+.|.|||.+..+      .++.|+|||+|||+|||+.|-         +..||.+.  
T Consensus       411 LsRlMtgDTYTAH---AGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATY---------GMsPYPGi--  470 (1157)
T KOG4278|consen  411 LSRLMTGDTYTAH---AGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATY---------GMSPYPGI--  470 (1157)
T ss_pred             hhhhhcCCceecc---cCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhc---------CCCCCCCc--
Confidence            9999876543322   122235689999999876      677899999999999999985         37888886  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                         +...+..+... ..+..-|     ..|+..+++||+.||+++|.+||++.|+.+.++.+-++.
T Consensus       471 ---dlSqVY~LLEk-gyRM~~P-----eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s  527 (1157)
T KOG4278|consen  471 ---DLSQVYGLLEK-GYRMDGP-----EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS  527 (1157)
T ss_pred             ---cHHHHHHHHhc-cccccCC-----CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence               33444444432 3333333     458999999999999999999999999999999887654

>KOG1025|consensus

Probab=100.00  E-value=5.6e-42  Score=341.67  Aligned_cols=256  Identities=24%  Similarity=0.458  Sum_probs=211.2

Q ss_pred             ccccceeeeecCeEEEEEEE--CC----ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HG----ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~----~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ....++||+|+||+||+|.|  .|    -+||+|++......  ....-.|...+.+++|||+++++|+|..+.     +
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-----~  772 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-----L  772 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----H
Confidence            44578999999999999998  43    47899988655433  233346777788899999999999998874     5


Q ss_pred             EeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .||++||+.|+|.+|++  +..+..+..+.|..|||+||.|||.+        +++||||.++|||+.+...+||.|||+
T Consensus       773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q--------rlVHrdLaaRNVLVksP~hvkitdfgl  844 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ--------RLVHRDLAARNVLVKSPNHVKITDFGL  844 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc--------chhhhhhhhhheeecCCCeEEEEecch
Confidence            89999999999999996  46799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+..........  ...-.+.|||-|.+...      .++.++|||||||++||++|-         +..||.+.   
T Consensus       845 a~ll~~d~~ey~~~--~gK~pikwmale~i~~~------~~thqSDVWsfGVtiWElmTF---------Ga~Py~gi---  904 (1177)
T KOG1025|consen  845 AKLLAPDEKEYSAP--GGKVPIKWMALESIRIR------KYTHQSDVWSFGVTIWELMTF---------GAKPYDGI---  904 (1177)
T ss_pred             hhccCccccccccc--ccccCcHHHHHHHhhcc------CCCchhhhhhhhhhHHHHHhc---------CCCccCCC---
Confidence            99888766554332  12234689999998876      888999999999999999984         37788876   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                        ..+++.+.+..... ..-|     ..|+.+++.+|.+||..|+..||+++++...+.+++.....
T Consensus       905 --~~~eI~dlle~geR-LsqP-----piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr  963 (1177)
T KOG1025|consen  905 --PAEEIPDLLEKGER-LSQP-----PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR  963 (1177)
T ss_pred             --CHHHhhHHHhcccc-CCCC-----CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence              44666666654333 3323     34888999999999999999999999999999998876554

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=4.2e-42  Score=340.08  Aligned_cols=255  Identities=21%  Similarity=0.401  Sum_probs=195.2

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+|.+.       +..||||++.......  .....|+..+..+ +|+||+++++++.... 
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~-  115 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG-  115 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC-
Confidence            367999999999999999999852       2479999886543221  1223455555557 8999999999987763 


Q ss_pred             cccEEEeeecccCcccHHHHhcc---------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR---------------------------------------------------------  227 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~---------------------------------------------------------  227 (443)
                         .+++||||+++|+|.+++..                                                         
T Consensus       116 ---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         116 ---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             ---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence               47999999999999998842                                                         


Q ss_pred             --------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        228 --------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       228 --------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                                    ..+++..++.++.||+.||.|||+.        +|+||||||+|||+++++.+||+|||+++....
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--------giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK--------NCIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC--------CEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence                          1367888999999999999999998        999999999999999999999999999976543


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....  ......++..|+|||++.+.      .++.++|||||||++|||++ |          ..||......    .
T Consensus       265 ~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlGvil~ellt~G----------~~Pf~~~~~~----~  322 (374)
T cd05106         265 DSNYV--VKGNARLPVKWMAPESIFDC------VYTVQSDVWSYGILLWEIFSLG----------KSPYPGILVN----S  322 (374)
T ss_pred             Cccee--eccCCCCccceeCHHHhcCC------CCCccccHHHHHHHHHHHHhCC----------CCCCcccccc----H
Confidence            22111  11223456789999998765      67789999999999999997 8          6677654221    1


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ....... ....+..+     ...+.++.+++.+||+.||++|||+.+|++.|+++.
T Consensus       323 ~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         323 KFYKMVK-RGYQMSRP-----DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHHH-cccCccCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            2222221 12222222     224568999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-42  Score=329.67  Aligned_cols=242  Identities=21%  Similarity=0.296  Sum_probs=192.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~   76 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ----RFL   76 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC----CeE
Confidence            3688899999999999999998  489999999864321    112234566666679999999999988765    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~NIli~~~~~~kl~Dfg~~  148 (291)
T cd05612          77 YMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK--------EIVYRDLKPENILLDKEGHIKLTDFGFA  148 (291)
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCHHHeEECCCCCEEEEecCcc
Confidence            999999999999999864 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +......       ....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...    
T Consensus       149 ~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~~l~~g----------~~pf~~~----  201 (291)
T cd05612         149 KKLRDRT-------WTLCGTPEYLAPEVIQSK------GHNKAVDWWALGILIYEMLVG----------YPPFFDD----  201 (291)
T ss_pred             hhccCCc-------ccccCChhhcCHHHHcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC----
Confidence            7654311       234689999999998765      567899999999999999999          6677653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~  424 (443)
                       ........+..  ....++.     ..+..+.+|+++||+.||.+||+     ++++++.
T Consensus       202 -~~~~~~~~i~~--~~~~~~~-----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         202 -NPFGIYEKILA--GKLEFPR-----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             -CHHHHHHHHHh--CCcCCCc-----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence             12222222221  2223332     24567999999999999999995     8887754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.2e-41  Score=329.64  Aligned_cols=256  Identities=22%  Similarity=0.419  Sum_probs=198.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|+..+.||+|+||.||+|.+  ++.    .||+|.+......  ......|+..+..++||||++++|++....    
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~----   82 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST----   82 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC----
Confidence            5799999999999999999987  344    3899987643221  122234555666699999999999987653    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++++||+++|+|.+++..  ..+++..++.++.||+.||+|||+.        +|+||||||+|||++.++.+||+||
T Consensus        83 -~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~iiH~dlkp~Nill~~~~~~kl~Df  153 (316)
T cd05108          83 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER--------RLVHRDLAARNVLVKTPQHVKITDF  153 (316)
T ss_pred             -ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc--------CeeccccchhheEecCCCcEEEccc
Confidence             4799999999999999965  3588999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.+........  .....++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.+.
T Consensus       154 G~a~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~------~~~~~~Di~slGv~l~el~t~g----------~~p~~~~  215 (316)
T cd05108         154 GLAKLLGADEKEYH--AEGGKVPIKWMALESILHR------IYTHQSDVWSYGVTVWELMTFG----------SKPYDGI  215 (316)
T ss_pred             cccccccCCCccee--ccCCccceeecChHHhccC------CCCchhhhHHHHHHHHHHHcCC----------CCCCCCC
Confidence            99987654322211  1222346789999998766      66789999999999999998 7          6676543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                           ....+...... ......+     ..++..+.+++.+||..||++|||+.+++..|.++.....
T Consensus       216 -----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         216 -----PASEISSILEK-GERLPQP-----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             -----CHHHHHHHHhC-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence                 22333333322 2222222     2355679999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.4e-41  Score=322.11  Aligned_cols=266  Identities=23%  Similarity=0.345  Sum_probs=195.8

Q ss_pred             ccccceeeeecCeEEEEEEE------CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        138 ISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      |++.+.||+|+||+||++.+      ++..||+|.+.....  .......|+..+..++||||+++++++.....  ..+
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~   83 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG--KGL   83 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC--ceE
Confidence            48899999999999988764      467899998865432  22233456666667999999999998765433  357


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +++|||+++|+|.+++....+++.++..++.|++.||.|||+.        +|+||||||+|||+++++.+||+|||+++
T Consensus        84 ~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~~l~dfg~~~  155 (283)
T cd05080          84 QLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ--------HYIHRDLAARNVLLDNDRLVKIGDFGLAK  155 (283)
T ss_pred             EEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccChheEEEcCCCcEEEeeccccc
Confidence            9999999999999999888899999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC--
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM--  367 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~--  367 (443)
                      ........... .....++..|+|||.+...      .++.++||||||+++|||+||+.|+....   ..+......  
T Consensus       156 ~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~  225 (283)
T cd05080         156 AVPEGHEYYRV-REDGDSPVFWYAVECLKEN------KFSYASDVWSFGVTLYELLTHCDSKQSPP---KKFEEMIGPKQ  225 (283)
T ss_pred             ccCCcchhhcc-CCCCCCCceeeCHhHhccc------CCCcccccHHHHHHHHHHHhCCCCCCCCc---chhhhhhcccc
Confidence            66542221111 1122456679999998765      66789999999999999999954432110   000000000  


Q ss_pred             -CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        368 -DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       368 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                       ............ ....+..     +..++.++.+++.+||+.||++|||++++++.|+++.
T Consensus       226 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         226 GQMTVVRLIELLE-RGMRLPC-----PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             cccchhhhhhhhh-cCCCCCC-----CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence             000011111111 1111111     2346678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.8e-42  Score=334.23  Aligned_cols=241  Identities=22%  Similarity=0.340  Sum_probs=192.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|++.....    .......|+..+..++||||+++++++...    ..+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~   93 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE----NRV   93 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC----CEE
Confidence            6799999999999999999998  578999999865321    111223556666669999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~dlkp~NIll~~~~~~kl~Dfg~~  165 (329)
T PTZ00263         94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK--------DIIYRDLKPENLLLDNKGHVKVTDFGFA  165 (329)
T ss_pred             EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCHHHEEECCCCCEEEeeccCc
Confidence            999999999999999865 5689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +......       ....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.    
T Consensus       166 ~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~elltg----------~~pf~~~----  218 (329)
T PTZ00263        166 KKVPDRT-------FTLCGTPEYLAPEVIQSK------GHGKAVDWWTMGVLLYEFIAG----------YPPFFDD----  218 (329)
T ss_pred             eEcCCCc-------ceecCChhhcCHHHHcCC------CCCCcceeechHHHHHHHHcC----------CCCCCCC----
Confidence            7654321       234789999999999876      567899999999999999999          6777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                       ........+.  .....+|.     ..+..+.+|+.+||+.||.+||+     +.++++
T Consensus       219 -~~~~~~~~i~--~~~~~~p~-----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        219 -TPFRIYEKIL--AGRLKFPN-----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             -CHHHHHHHHh--cCCcCCCC-----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence             1122222221  12233332     24567899999999999999997     677764

>KOG0594|consensus

Probab=100.00  E-value=4.3e-42  Score=317.64  Aligned_cols=271  Identities=26%  Similarity=0.298  Sum_probs=203.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCC-ceeeeeeccccCC--ccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHEN-ILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~n-Iv~l~g~~~~~~~--~~~  207 (443)
                      ..|...++||+|+||+||+|+.  +|+.||+|.+....+   ......+|+..+..++|+| ||++++++.+...  ...
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            5678888999999999999987  689999999876544   2233457777777799999 9999999987652  223


Q ss_pred             EEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                      .+++|+||+.. +|..++..     ..++...+..++.||+.||+|||++        +|+||||||+||||+++|.+||
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~--------~IlHRDLKPQNlLi~~~G~lKl  161 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH--------GILHRDLKPQNLLISSSGVLKL  161 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecccCCcceEEECCCCcEee
Confidence            68999999986 99999964     3578889999999999999999999        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------  352 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------  352 (443)
                      +|||+|+...-....    .+..++|..|.|||++.+..     .|++..||||+||++.||+++++.+.          
T Consensus       162 aDFGlAra~~ip~~~----yt~evvTlWYRaPEvLlGs~-----~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~  232 (323)
T KOG0594|consen  162 ADFGLARAFSIPMRT----YTPEVVTLWYRAPEVLLGST-----SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR  232 (323)
T ss_pred             eccchHHHhcCCccc----ccccEEEeeccCHHHhcCCC-----cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence            999999866533322    35568999999999998873     56689999999999999999876542          


Q ss_pred             cccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCC--chhHHHHHHHHHHHhcCCcCCCCcHHHHHHH--HHHH
Q psy14889        353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVS--DSTLNAMTKVMKECWHQNANVRLSALRVKKT--LIKL  428 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~l  428 (443)
                      +|.....|-...++......+.......    ..-+..+..  ........+++.+||+.+|.+|.|++.+++.  +..+
T Consensus       233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~----~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  233 IFRLLGTPNEKDWPGVSSLPDYKAPFPK----WPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             HHHHcCCCCccCCCCccccccccccCcC----CCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            3444555544444333222221110000    000000000  1112468899999999999999999999875  4444

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.2e-41  Score=324.84  Aligned_cols=246  Identities=22%  Similarity=0.301  Sum_probs=190.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .|+..+.||+|+||.||+|..  +|+.||+|.+......    ......|+..+..++|+||+++++++.+.    ..++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~----~~~~   76 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK----DALC   76 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC----CeEE
Confidence            367789999999999999987  6899999988643211    11223456666669999999999998766    3579


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +||||+++|+|.+++..   ..+++..+..++.|++.||+|||+.        +|+||||||+|||+++++.+||+|||+
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiH~dikp~Nill~~~~~~kl~Dfg~  148 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE--------RIVYRDLKPENILLDDRGHIRISDLGL  148 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence            99999999999988743   3689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........     .....||..|+|||++.+.      .++.++|||||||++|||++|          ..||......
T Consensus       149 ~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~------~~~~~~DvwslGvil~el~~g----------~~pf~~~~~~  207 (285)
T cd05631         149 AVQIPEGET-----VRGRVGTVGYMAPEVINNE------KYTFSPDWWGLGCLIYEMIQG----------QSPFRKRKER  207 (285)
T ss_pred             cEEcCCCCe-----ecCCCCCCCccCHhhhcCC------CCCcccCchhHHHHHHHHHhC----------CCCCCCCCcc
Confidence            976543211     1234789999999999876      677899999999999999999          6677653211


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                       ...+.+...+.  ......     ....+..+.+|+++||+.||++||+     ++++++
T Consensus       208 -~~~~~~~~~~~--~~~~~~-----~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         208 -VKREEVDRRVK--EDQEEY-----SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             -hhHHHHHHHhh--cccccC-----CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence             11122222211  111112     2335678999999999999999997     788776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=7.2e-42  Score=332.15  Aligned_cols=238  Identities=23%  Similarity=0.330  Sum_probs=188.5

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||++..  +|+.||+|++.....    .......|+..+..++||||+++++++...    ..+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~lv~e~   76 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH----DRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC----CEEEEEEeC
Confidence            4699999999999987  688999999865321    112223456666669999999999988766    458999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++.....
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~  148 (323)
T cd05571          77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC--------DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence            999999998864 5789999999999999999999998        9999999999999999999999999998753221


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     .....
T Consensus       149 ~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg----------~~Pf~~~-----~~~~~  203 (323)
T cd05571         149 GA----TMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ-----DHEKL  203 (323)
T ss_pred             CC----cccceecCccccChhhhcCC------CCCccccCcccchhhhhhhcC----------CCCCCCC-----CHHHH
Confidence            11    12345799999999999776      677899999999999999999          6777543     22333


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      ...+..  ....++     ...+.++.+++.+||+.||++||     ++.++++
T Consensus       204 ~~~~~~--~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         204 FELILM--EEIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHc--CCCCCC-----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            333222  222333     23567899999999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2e-41  Score=322.49  Aligned_cols=252  Identities=24%  Similarity=0.400  Sum_probs=196.9

Q ss_pred             ccccccceeeeecCeEEEEEEECC-------ceeEEEEeeccCccch--HHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASW--SRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~-------~~vAvK~~~~~~~~~~--~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|++.+.||+|+||.||+|...+       ..||+|.+........  ....|+..+..++||||+++++++....   
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---   81 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ---   81 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence            578999999999999999998732       4699998864432221  2245666666699999999999987653   


Q ss_pred             cEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                       ..+++|||+++|+|.+++..                 ..+++.+++.++.|++.||.|||+.        +++|+||||
T Consensus        82 -~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~--------~i~H~dlkp  152 (283)
T cd05048          82 -PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH--------HFVHRDLAA  152 (283)
T ss_pred             -ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC--------Ceecccccc
Confidence             46899999999999999853                 3478899999999999999999998        999999999


Q ss_pred             CCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cc
Q psy14889        270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RT  348 (443)
Q Consensus       270 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~  348 (443)
                      +||++++++.+||+|||+++........  .......+++.|+|||.+...      .++.++|||||||++|||++ | 
T Consensus       153 ~Nil~~~~~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~sDv~slG~il~el~~~g-  223 (283)
T cd05048         153 RNCLVGEGLTVKISDFGLSRDIYSADYY--RVQSKSLLPVRWMPPEAILYG------KFTTESDIWSFGVVLWEIFSYG-  223 (283)
T ss_pred             ceEEEcCCCcEEECCCcceeeccccccc--cccCCCcccccccCHHHhccC------cCchhhhHHHHHHHHHHHHcCC-
Confidence            9999999999999999999755332111  112234567889999998765      66789999999999999998 7 


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                               ..||.+..     ..++...+.. ...+..+     ..++.++.+|+.+||+.||.+||++.+|++.|+++
T Consensus       224 ---------~~p~~~~~-----~~~~~~~i~~-~~~~~~~-----~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         224 ---------LQPYYGFS-----NQEVIEMIRS-RQLLPCP-----EDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             ---------CCCCCCCC-----HHHHHHHHHc-CCcCCCc-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence                     66776532     2333333322 2222222     34778899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG2345|consensus

Probab=100.00  E-value=2e-42  Score=302.72  Aligned_cols=268  Identities=23%  Similarity=0.324  Sum_probs=206.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC-ccchHHHHHHHHHHhccCCCceeeeeeccccCC-cccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD-EASWSRETEIYSTVLLRHENILGYIGSDMTSRN-SCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~~~~~  210 (443)
                      .++|.+.+.||+|||+-||+++.  +++.+|+|++.... ++.....+|+...++++|||+++++++...... .....|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            47899999999999999999985  78999999886655 333333466666667999999999998765433 335689


Q ss_pred             eeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      |+++|...|+|.+.+.+     ..+++.+++.|+.+|++||++||+.      .|++.||||||.|||+++++.++|.||
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~------~~~yAH~DiKP~NILls~~~~~vl~D~  173 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK------EPPYAHRDIKPANILLSDSGLPVLMDL  173 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc------CCcccccCCCcceeEecCCCceEEEec
Confidence            99999999999999853     3699999999999999999999998      567999999999999999999999999


Q ss_pred             CCcccccccCCcCCC-----CCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        286 GLAVSYSQLSNKMDI-----PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       286 Gla~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      |.+....-.......     .......|..|+|||++.-....   ..++++|||||||+||+|+.|          ..|
T Consensus       174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~---ti~ertDIWSLGCtLYa~mf~----------~sP  240 (302)
T KOG2345|consen  174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHC---TITERTDIWSLGCTLYAMMFG----------ESP  240 (302)
T ss_pred             cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCc---ccccccchhhhhHHHHHHHHc----------CCc
Confidence            998654321110000     00123578899999999765443   667899999999999999999          778


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      |........+..   -.+  ......+|+   +...++.+.++++.|++.||.+||++.+++..++.+.
T Consensus       241 fe~~~~~GgSla---LAv--~n~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  241 FERIYQQGGSLA---LAV--QNAQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             chHHhhcCCeEE---Eee--eccccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            876543221111   111  111223333   2336788999999999999999999999999998764

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.1e-41  Score=335.74  Aligned_cols=256  Identities=23%  Similarity=0.412  Sum_probs=196.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhcc-CCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLR-HENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~  204 (443)
                      .++|.+.++||+|+||.||+|.+.       +..||||++......  ......|+..+..+. ||||+++++++...  
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~--  113 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS--  113 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC--
Confidence            468999999999999999999862       246999988643322  122334566666675 99999999999766  


Q ss_pred             cccEEEeeecccCcccHHHHhcc---------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR---------------------------------------------------------  227 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~---------------------------------------------------------  227 (443)
                        ..+++||||+++|+|.+++..                                                         
T Consensus       114 --~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         114 --GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             --CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence              347999999999999988743                                                         


Q ss_pred             ----------------------------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCC
Q psy14889        228 ----------------------------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDI  267 (443)
Q Consensus       228 ----------------------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDl  267 (443)
                                                              ..+++..+..++.|++.||.|||+.        +|+||||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivH~di  263 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK--------NCVHRDL  263 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCC
Confidence                                                    1367788899999999999999998        9999999


Q ss_pred             CCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-
Q psy14889        268 KSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-  346 (443)
Q Consensus       268 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-  346 (443)
                      ||+|||++.++.+||+|||+++........  .......++..|+|||.+.+.      .++.++|||||||++|||++ 
T Consensus       264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwSlGvil~ellt~  335 (400)
T cd05105         264 AARNVLLAQGKIVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAPESIFDN------LYTTLSDVWSYGILLWEIFSL  335 (400)
T ss_pred             ChHhEEEeCCCEEEEEeCCcceeccccccc--cccCCcCCCcceEChhhhcCC------CCCchhhHHHHHHHHHHHHHC
Confidence            999999999999999999999765432221  112234577889999998765      66789999999999999997 


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      |          ..||.....    .......+. ...++..+     ..++..+.+++.+||+.||++|||+.+|.+.|+
T Consensus       336 g----------~~P~~~~~~----~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~  395 (400)
T cd05105         336 G----------GTPYPGMIV----DSTFYNKIK-SGYRMAKP-----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE  395 (400)
T ss_pred             C----------CCCCcccch----hHHHHHHHh-cCCCCCCC-----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence            6          667765321    112222222 12222222     346678999999999999999999999999999


Q ss_pred             HHhh
Q psy14889        427 KLAC  430 (443)
Q Consensus       427 ~l~~  430 (443)
                      ++..
T Consensus       396 ~l~~  399 (400)
T cd05105         396 SLLP  399 (400)
T ss_pred             HHcC
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=3.5e-41  Score=316.95  Aligned_cols=251  Identities=23%  Similarity=0.409  Sum_probs=196.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.++||+|+||.||+|.. ++..||+|.+............|+..+..++|+||+++++.+....    ..+++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e   81 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE----PIYIITE   81 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CcEEEEe
Confidence            6899999999999999999987 5678999987654332223334555555699999999999887653    4799999


Q ss_pred             ccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        215 YHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       215 ~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+++|+|.++++.   ..+++..++.++.|++.||+|||+.        +++||||||+||+++.++.+||+|||++...
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~--------~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  153 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK--------NYIHRDLRAANVLVSESLMCKIADFGLARVI  153 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccchhhEEecCCCcEEECCCccceec
Confidence            9999999999864   4588999999999999999999998        9999999999999999999999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ......   ......++..|+|||++...      .++.++||||||+++|||+| |          ..||....     
T Consensus       154 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~t~g----------~~p~~~~~-----  209 (261)
T cd05072         154 EDNEYT---AREGAKFPIKWTAPEAINFG------SFTIKSDVWSFGILLYEIVTYG----------KIPYPGMS-----  209 (261)
T ss_pred             CCCcee---ccCCCccceecCCHHHhccC------CCChhhhhhhhHHHHHHHHccC----------CCCCCCCC-----
Confidence            432211   11223466789999998765      56789999999999999998 7          66775531     


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      .......+.. ..+...+     ..++.++.+++.+||+.||++|||++++.+.|+++
T Consensus       210 ~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         210 NSDVMSALQR-GYRMPRM-----ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            2222222221 1111111     23567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.5e-41  Score=330.03  Aligned_cols=258  Identities=22%  Similarity=0.410  Sum_probs=197.6

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+|...       ++.||+|++.......  .....|+..+..+ +|+||+++++++.... 
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-   84 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-   84 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-
Confidence            368999999999999999999752       4689999886432211  1223455555557 8999999999887553 


Q ss_pred             cccEEEeeecccCcccHHHHhcc---------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR---------------------------------------------------------  227 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~---------------------------------------------------------  227 (443)
                        ..+++++||+++|+|.+++..                                                         
T Consensus        85 --~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          85 --GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             --CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence              347899999999999998842                                                         


Q ss_pred             -----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCC
Q psy14889        228 -----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP  302 (443)
Q Consensus       228 -----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~  302 (443)
                           ..+++..+..++.||+.||+|||+.        +|+||||||+|||+++++.+||+|||+++.+.......  ..
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~--~~  232 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLASR--------KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV--RK  232 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh--hc
Confidence                 2578999999999999999999998        99999999999999999999999999997764322111  12


Q ss_pred             CCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhc
Q psy14889        303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICID  381 (443)
Q Consensus       303 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~  381 (443)
                      ....++..|+|||++.+.      .++.++|||||||++|||++ |          ..||.....    .+.+...+. .
T Consensus       233 ~~~~~~~~y~aPE~~~~~------~~~~~~Di~SlGv~l~el~t~g----------~~p~~~~~~----~~~~~~~~~-~  291 (337)
T cd05054         233 GDARLPLKWMAPESIFDK------VYTTQSDVWSFGVLLWEIFSLG----------ASPYPGVQI----DEEFCRRLK-E  291 (337)
T ss_pred             cCCCCCccccCcHHhcCC------CCCccccHHHHHHHHHHHHHcC----------CCCCCCCCc----cHHHHHHHh-c
Confidence            233567789999998776      67789999999999999998 7          667765321    122222221 2


Q ss_pred             CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        382 QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ...+..+     ...+.++.+++.+||+.+|++||++.|+++.|+++.+.
T Consensus       292 ~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~  336 (337)
T cd05054         292 GTRMRAP-----EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE  336 (337)
T ss_pred             cCCCCCC-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            2222222     23456799999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-41  Score=329.81  Aligned_cols=249  Identities=20%  Similarity=0.224  Sum_probs=193.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|.+  +++.||||++......    ......|+..+..++||||+++++++...    ...
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----~~~   76 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD----EYL   76 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC----CEE
Confidence            3689999999999999999998  5889999998653211    11223455555568999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~kL~Dfg~a  148 (333)
T cd05600          77 YLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL--------GYIHRDLKPENFLIDASGHIKLTDFGLS  148 (333)
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEECCCCCEEEEeCcCC
Confidence            999999999999999964 5689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +....       ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....   
T Consensus       149 ~~~~~-------~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~ell~g----------~~pf~~~~---  202 (333)
T cd05600         149 KGIVT-------YANSVVGSPDYMAPEVLRGK------GYDFTVDYWSLGCMLYEFLCG----------FPPFSGST---  202 (333)
T ss_pred             ccccc-------ccCCcccCccccChhHhcCC------CCCCccceecchHHHhhhhhC----------CCCCCCCC---
Confidence            75543       12345799999999999876      667899999999999999999          66776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCC-CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRW-VSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ..+....+.........+... .....+.++.+++.+||..+|.+||++.++++.
T Consensus       203 --~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         203 --PNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             --HHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence              122211111111111111100 012356789999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=7.9e-41  Score=318.06  Aligned_cols=256  Identities=23%  Similarity=0.435  Sum_probs=197.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+  +++    .+++|.+.......  ...+.++..+..++||||+++++++...     
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-----   81 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-----   81 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----
Confidence            5788899999999999999998  454    46777764332221  2234555566678999999999987543     


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++++||+++|+|.+++..  ..+++..+..++.||+.||.|||+.        +++||||||+|||+++++.+||+||
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiH~dlkp~nili~~~~~~kl~Df  153 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH--------RMVHRNLAARNILLKSDSIVQIADF  153 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CEeccccCcceEEEcCCCcEEEcCC
Confidence            35789999999999999964  5689999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.........  ......++..|+|||.+.++      .++.++||||||+++||+++ |          ..||.+.
T Consensus       154 g~~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~el~t~g----------~~p~~~~  215 (279)
T cd05111         154 GVADLLYPDDKKY--FYSEHKTPIKWMALESILFG------RYTHQSDVWSYGVTVWEMMSYG----------AEPYAGM  215 (279)
T ss_pred             ccceeccCCCccc--ccCCCCCcccccCHHHhccC------CcCchhhHHHHHHHHHHHHcCC----------CCCCCCC
Confidence            9997664322211  11234567789999999766      66789999999999999998 7          6677653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      .     .......+. ....+..+     ..++..+.+++.+||..||++|||+.|+++.|..+.+..+
T Consensus       216 ~-----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~  273 (279)
T cd05111         216 R-----PHEVPDLLE-KGERLAQP-----QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP  273 (279)
T ss_pred             C-----HHHHHHHHH-CCCcCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence            2     223333332 22222222     2245678999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.7e-41  Score=334.01  Aligned_cols=254  Identities=19%  Similarity=0.229  Sum_probs=197.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+++.  +++.||+|++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~----~~~  118 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD----KYL  118 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC----CEE
Confidence            6899999999999999999988  588999999864221    111223455555669999999999988766    458


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++||||+++|+|.+++.+..+++.++..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++.
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDLkp~NILl~~~~~~kL~DfG~~~  190 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM--------GFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHEEEcCCCCEEEEecccee
Confidence            9999999999999999888899999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   ......||+.|+|||++.+.....  .++.++|||||||++|||++|          ..||....    
T Consensus       191 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~--~~~~~~DiwSlGvilyelltG----------~~Pf~~~~----  251 (370)
T cd05596         191 KMDANGMV---RCDTAVGTPDYISPEVLKSQGGDG--YYGRECDWWSVGVFLYEMLVG----------DTPFYADS----  251 (370)
T ss_pred             eccCCCcc---cCCCCCCCcCeECHHHhccCCCCC--CCCCceeeeehhHHHHHHHhC----------CCCcCCCC----
Confidence            65432211   123457999999999987542211  467899999999999999999          67776531    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                      ......+.. .......+|..   ...+.++.+++.+||+.+|.+  |+|++++++.
T Consensus       252 ~~~~~~~i~-~~~~~~~~~~~---~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         252 LVGTYSKIM-DHKNSLTFPDD---IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHHHHH-cCCCcCCCCCc---CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            112222222 22222233321   235678999999999999988  9999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.1e-41  Score=327.88  Aligned_cols=242  Identities=25%  Similarity=0.385  Sum_probs=189.1

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHH-HHHhccCCCceeeeeeccccCCcccE
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      |++.+.||+|+||.||+|.+  +++.||||++.....      .....|.++. .+..++||||+++++++...    ..
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~----~~   76 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE----DH   76 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----CE
Confidence            56789999999999999987  588999999864321      1122233332 23347899999999998766    45


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +++||||+++|+|..+++...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~--------~ivHrdlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05589          77 VCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN--------KIVYRDLKLDNLLLDTEGFVKIADFGLC  148 (324)
T ss_pred             EEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEecCCCHHHeEECCCCcEEeCcccCC
Confidence            89999999999999999888899999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......    ......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||...    
T Consensus       149 ~~~~~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~G----------~~pf~~~----  204 (324)
T cd05589         149 KEGMGFGD----RTSTFCGTPEFLAPEVLTET------SYTRAVDWWGLGVLIYEMLVG----------ESPFPGD----  204 (324)
T ss_pred             ccCCCCCC----cccccccCccccCHhHhcCC------CCCcccchhhHHHHHHHHHhC----------CCCCCCC----
Confidence            64332111    12345799999999999876      667899999999999999999          6777643    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                       ........+..  ..+..|     ...+..+.+++.+||+.||.+||     ++.++++
T Consensus       205 -~~~~~~~~i~~--~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         205 -DEEEVFDSIVN--DEVRYP-----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             -CHHHHHHHHHh--CCCCCC-----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence             22222222221  122222     23567799999999999999999     5666655

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-41  Score=327.51  Aligned_cols=236  Identities=24%  Similarity=0.326  Sum_probs=184.5

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||.||+|..  +++.||+|++....    ........|+..+..++||||+++++++...    ..+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP----EKLYLVLAFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC----CeEEEEEcCCC
Confidence            69999999999998  57899999886432    1112223455666669999999999988765    45899999999


Q ss_pred             cccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        218 FGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       218 ~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      +|+|.+++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++.......
T Consensus        77 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  148 (312)
T cd05585          77 GGELFHHLQREGRFDLSRARFYTAELLCALENLHKF--------NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD  148 (312)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC
Confidence            9999999854 5799999999999999999999998        999999999999999999999999999875432211


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                          ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.     .......
T Consensus       149 ----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~el~tg----------~~pf~~~-----~~~~~~~  203 (312)
T cd05585         149 ----KTNTFCGTPEYLAPELLLGH------GYTKAVDWWTLGVLLYEMLTG----------LPPFYDE-----NVNEMYR  203 (312)
T ss_pred             ----ccccccCCcccCCHHHHcCC------CCCCccceechhHHHHHHHhC----------CCCcCCC-----CHHHHHH
Confidence                12345799999999999875      677899999999999999999          6777653     2222222


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc---HHHHHH
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS---ALRVKK  423 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~  423 (443)
                      .+.  .....++     ...+.++.+++.+||+.||++||+   +.++++
T Consensus       204 ~~~--~~~~~~~-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         204 KIL--QEPLRFP-----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHH--cCCCCCC-----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            222  1222233     335678999999999999999985   555554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=6.9e-41  Score=315.54  Aligned_cols=251  Identities=23%  Similarity=0.421  Sum_probs=196.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .+|.+.+.||+|+||.||+|.+  +++.||+|++............|+..+..++||||+++++++....    .++++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~   81 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYIIT   81 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCC----CcEEEE
Confidence            5688899999999999999988  4789999988654332223344555666699999999999987663    478999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++|+|.+++..   ..+++..++.++.|++.||+|||+.        +++||||||+||++++++.+||+|||++..
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~--------~i~H~dlkp~nil~~~~~~~kl~df~~~~~  153 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--------NFIHRDLAARNCLVGENHLVKVADFGLSRL  153 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeecccCcceEEEcCCCcEEeCCCccccc
Confidence            99999999999854   3589999999999999999999998        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   .....++..|+|||.+.+.      .++.++|||||||++|||++ |          ..||...     
T Consensus       154 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~t~g----------~~p~~~~-----  209 (263)
T cd05052         154 MTGDTYTA---HAGAKFPIKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATYG----------MSPYPGI-----  209 (263)
T ss_pred             cccceeec---cCCCCCccccCCHHHhccC------CCCchhHHHHHHHHHHHHHcCC----------CCCCCCC-----
Confidence            64322111   1122345689999998765      66789999999999999998 7          5666543     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..+.....+.. ...+..+     ..++.++.+++.+||+.||++|||+.++++.|+.+
T Consensus       210 ~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         210 DLSQVYELLEK-GYRMERP-----EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CHHHHHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            22233222221 1122222     34667899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.8e-41  Score=343.21  Aligned_cols=254  Identities=24%  Similarity=0.343  Sum_probs=198.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC----
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN----  204 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~----  204 (443)
                      ..++|.+.+.||+|+||.||+|..  +|+.||||++.....   .....+.|+..+..++|+||+++++.+.....    
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            347999999999999999999987  689999999865432   12233466767777899999999887654332    


Q ss_pred             cccEEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT  279 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~  279 (443)
                      ....+++||||+++|+|.++++.     ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~--------~IiHrDLKP~NILl~~~~~  181 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK--------HMIHRDIKSANILLCSNGL  181 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEEeCCCC
Confidence            11247899999999999999853     4689999999999999999999998        9999999999999999999


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||+++.+......  .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..
T Consensus       182 vkL~DFGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~------~~s~k~DVwSlGvilyeLltG----------~~  243 (496)
T PTZ00283        182 VKLGDFGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRK------PYSKKADMFSLGVLLYELLTL----------KR  243 (496)
T ss_pred             EEEEecccCeeccccccc--cccccccCCcceeCHHHhCCC------CCCcHHHHHHHHHHHHHHHHC----------CC
Confidence            999999999766532211  112345799999999999876      677899999999999999999          66


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ||...     ....+...... .....++     ..++.++.+++.+||+.||.+|||+.++++.
T Consensus       244 Pf~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        244 PFDGE-----NMEEVMHKTLA-GRYDPLP-----PSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCC-----CHHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            77543     22222222221 1222222     3366789999999999999999999999863

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.7e-41  Score=326.46  Aligned_cols=253  Identities=25%  Similarity=0.329  Sum_probs=188.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||++......  ......|+..+..++||||+++++++.+.    ...++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~l   80 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK----ETLTL   80 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC----CeEEE
Confidence            6899999999999999999998  5889999988643322  22334566666679999999999998766    35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||+. ++|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~dlkp~Nill~~~~~~kl~Dfg~~~  151 (303)
T cd07869          81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR--------YILHRDLKPQNLLISDTGELKLADFGLAR  151 (303)
T ss_pred             EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEECCCCcce
Confidence            999996 688888754  4689999999999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .......    ......||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+...   
T Consensus       152 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~g----------~~pf~~~~~---  209 (303)
T cd07869         152 AKSVPSH----TYSNEVVTLWYRPPDVLLGST-----EYSTCLDMWGVGCIFVEMIQG----------VAAFPGMKD---  209 (303)
T ss_pred             eccCCCc----cCCCCcccCCCCChHHHcCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCcc---
Confidence            5432211    113346889999999986541     456789999999999999999          556654311   


Q ss_pred             ChHHHHhhhhhcCC---------------C---------CCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQ---------------R---------PVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~---------------~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+.........               .         ..+...|.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         210 IQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            11111111100000               0         000000111123356889999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3.9e-41  Score=326.98  Aligned_cols=238  Identities=24%  Similarity=0.336  Sum_probs=187.0

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||+++.  +|..||+|++.....    .......|+..+..++||||+++++.+...    ..+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~----~~~~lv~E~   76 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----DRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC----CEEEEEEeC
Confidence            4699999999999987  588999999865321    111223456666669999999999998766    458999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +++|+|..++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++.....
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  148 (323)
T cd05595          77 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence            999999998864 5689999999999999999999998        9999999999999999999999999998653221


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     .....
T Consensus       149 ~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~ell~g----------~~Pf~~~-----~~~~~  203 (323)
T cd05595         149 GA----TMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ-----DHERL  203 (323)
T ss_pred             CC----ccccccCCcCcCCcccccCC------CCCchhchhhhHHHHHHHHhC----------CCCCCCC-----CHHHH
Confidence            11    11335799999999999776      667899999999999999999          6777543     22222


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      ...+..  ....+|     ...+.++.+++.+||+.||++||     ++.++++
T Consensus       204 ~~~~~~--~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         204 FELILM--EEIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHhc--CCCCCC-----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            222221  122233     23567899999999999999998     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=3.4e-41  Score=329.32  Aligned_cols=242  Identities=23%  Similarity=0.265  Sum_probs=191.6

Q ss_pred             ccccccceeeeecCeEEEEEEEC---CceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|.+.   +..||+|++.....    .......|+..+..++||||+++++++.+.    ..
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----~~  105 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----SY  105 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC----CE
Confidence            67999999999999999999863   35799998854321    111223455666669999999999998766    45


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDLkp~NILl~~~~~ikL~DFG~  177 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL--------NIVYRDLKPENLLLDKDGFIKMTDFGF  177 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEccCCCHHHEEECCCCCEEEecCCC
Confidence            8999999999999999964 5799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.....       .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       178 a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~ell~G----------~~Pf~~~---  231 (340)
T PTZ00426        178 AKVVDTR-------TYTLCGTPEYIAPEILLNV------GHGKAADWWTLGIFIYEILVG----------CPPFYAN---  231 (340)
T ss_pred             CeecCCC-------cceecCChhhcCHHHHhCC------CCCccccccchhhHHHHHhcC----------CCCCCCC---
Confidence            9765421       1234799999999999765      567899999999999999999          6777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                        ......+.+..  ....+|     ...+..+.+++++||+.||++|+     +++++++.
T Consensus       232 --~~~~~~~~i~~--~~~~~p-----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        232 --EPLLIYQKILE--GIIYFP-----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             --CHHHHHHHHhc--CCCCCC-----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence              11222222221  112222     22456789999999999999995     88888763

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=7.7e-41  Score=313.84  Aligned_cols=248  Identities=22%  Similarity=0.418  Sum_probs=193.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||.||++.+ ++..+|+|.+............|+..+..++||||+++++++....    ..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK----PLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCC----CEEEEEE
Confidence            5688899999999999999988 4568999987644333333345666666699999999999987663    4799999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+||++++++.+||+|||+++...
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN--------SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC--------CccccccCcceEEEcCCCeEEECCCCCccccC
Confidence            9999999999864  4589999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....   ......++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     ..
T Consensus       152 ~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~s~G~~l~el~~~g----------~~p~~~~-----~~  207 (256)
T cd05114         152 DDEYT---SSSGAKFPVKWSPPEVFNFS------KYSSKSDVWSFGVLMWEVFTEG----------KMPFEKK-----SN  207 (256)
T ss_pred             CCcee---ccCCCCCchhhCChhhcccC------ccchhhhhHHHHHHHHHHHcCC----------CCCCCCC-----CH
Confidence            32211   11223456689999998765      56689999999999999999 7          6677543     12


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      ......+.. ..++..+     ...+..+.+++.+||+.||++|||+.++++.|
T Consensus       208 ~~~~~~i~~-~~~~~~~-----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         208 YEVVEMISR-GFRLYRP-----KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            222222221 2222222     22446799999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0589|consensus

Probab=100.00  E-value=5.5e-42  Score=330.07  Aligned_cols=247  Identities=24%  Similarity=0.338  Sum_probs=202.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|...+++|+|+||.++..++  +++.+++|.+......   ....+.|+..+.+++|||||.+.+.|..+.   ..++
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~---~~l~   80 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG---QLLC   80 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC---ceEE
Confidence            5788999999999999998776  5789999988654322   223356777777799999999999998874   3489


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      |||+||+||+|.+.+.+   ..++++.+..++.|++.|+.|||++        +|+|||||+.||+++.++.+||+|||+
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~--------~iLHRDlK~~Nifltk~~~VkLgDfGl  152 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN--------RVLHRDLKCANIFLTKDKKVKLGDFGL  152 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh--------hhhcccchhhhhhccccCceeecchhh
Confidence            99999999999999964   3589999999999999999999988        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+......    ..+.+||+.||+||++.+.      +|..|+|||||||++|||++-          +.+|...   
T Consensus       153 aK~l~~~~~~----a~tvvGTp~YmcPEil~d~------pYn~KSDiWsLGC~~yEm~~l----------k~aF~a~---  209 (426)
T KOG0589|consen  153 AKILNPEDSL----ASTVVGTPYYMCPEILSDI------PYNEKSDIWSLGCCLYEMCTL----------KPAFKAS---  209 (426)
T ss_pred             hhhcCCchhh----hheecCCCcccCHHHhCCC------CCCccCcchhhcchHHHHHhc----------ccccCcc---
Confidence            9988765422    2456899999999999987      888999999999999999998          5555542   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        +...+...+.... ..++|     ...+.+++.++..|+..+|..||++.+++.+
T Consensus       210 --~m~~Li~ki~~~~-~~Plp-----~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  210 --NMSELILKINRGL-YSPLP-----SMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             --chHHHHHHHhhcc-CCCCC-----ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence              2233333333222 23333     3366789999999999999999999999986

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.9e-41  Score=314.00  Aligned_cols=252  Identities=23%  Similarity=0.408  Sum_probs=197.2

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.+ +++.||+|.+............|+..+..++||||+++++++....    ..++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE----PIYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCC----Ceeeee
Confidence            36799999999999999999987 5678999988654433333445666666799999999999887653    479999


Q ss_pred             cccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++++|.+++...   .+++..+..++.|++.||.|||+.        +|+|+||||+||++++++.+||+|||+++.
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ--------NYIHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence            999999999999653   589999999999999999999988        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   ......+..|+|||.+.+.      .++.++||||||+++|||+| |          ..||...     
T Consensus       153 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~t~g----------~~p~~~~-----  208 (261)
T cd05068         153 IKEDIYEA---REGAKFPIKWTAPEAALYN------RFSIKSDVWSFGILLTEIVTYG----------RMPYPGM-----  208 (261)
T ss_pred             ccCCcccc---cCCCcCceeccCccccccC------CCCchhhHHHHHHHHHHHHhcC----------CCCCCCC-----
Confidence            65321111   1112234579999998765      66789999999999999999 7          6677553     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ........+.. ......+     ...+..+.+++.+||+.||++||++.++.+.|+++
T Consensus       209 ~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         209 TNAEVLQQVDQ-GYRMPCP-----PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CHHHHHHHHHc-CCCCCCC-----CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            12222222221 1122222     23567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.9e-41  Score=330.33  Aligned_cols=251  Identities=24%  Similarity=0.371  Sum_probs=189.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|+..+.||+|+||.||+|.+  +++.||||++.......  .....|+..+..++|+||+++++++...    ..+++
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l  149 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN----GEIQV  149 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC----CeEEE
Confidence            5678889999999999999998  58999999986543322  2234566666679999999999998765    45799


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+.+|+|.+.   ...++..+..++.||+.||.|||+.        +|+||||||+|||+++++.+||+|||+++.+
T Consensus       150 v~e~~~~~~L~~~---~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~  218 (353)
T PLN00034        150 LLEFMDGGSLEGT---HIADEQFLADVARQILSGIAYLHRR--------HIVHRDIKPSNLLINSAKNVKIADFGVSRIL  218 (353)
T ss_pred             EEecCCCCccccc---ccCCHHHHHHHHHHHHHHHHHHHHC--------CEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence            9999999998754   3356778889999999999999998        9999999999999999999999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....||..|+|||++....... ...+.++|||||||++|||++|          +.||....  ....
T Consensus       219 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DvwslGvil~el~~g----------~~pf~~~~--~~~~  281 (353)
T PLN00034        219 AQTMDP----CNSSVGTIAYMSPERINTDLNHG-AYDGYAGDIWSLGVSILEFYLG----------RFPFGVGR--QGDW  281 (353)
T ss_pred             cccccc----ccccccCccccCccccccccccC-cCCCcchhHHHHHHHHHHHHhC----------CCCCCCCC--CccH
Confidence            432211    23457999999999986432211 1234689999999999999999          66665321  1122


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ......+.. ...+..+     ..++.++.+||.+||+.||++|||+.|+++.
T Consensus       282 ~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        282 ASLMCAICM-SQPPEAP-----ATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHhc-cCCCCCC-----CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            222222211 1122222     3356789999999999999999999999874

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.1e-40  Score=324.88  Aligned_cols=262  Identities=23%  Similarity=0.309  Sum_probs=193.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||+++.  ++..+|+|.+......  ......|+..+..++||||+++++++...    ..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~   79 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEIS   79 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----CEEE
Confidence            36899999999999999999998  5788999988654221  12234566666679999999999998766    4579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.. ..+++..+..++.|++.||.|||+..       +|+||||||+|||++.++.+||+|||++.
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-------~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  152 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH-------QIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (331)
T ss_pred             EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC-------CEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence            99999999999999965 56899999999999999999999851       69999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc------cCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE------YKAPYHD  363 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~------~~~P~~~  363 (443)
                      ......      .....||..|+|||++.+.      .++.++|||||||++|||++|+.|+.....      ...|..+
T Consensus       153 ~~~~~~------~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~  220 (331)
T cd06649         153 QLIDSM------ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVD  220 (331)
T ss_pred             cccccc------cccCCCCcCcCCHhHhcCC------CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccc
Confidence            654321      1334689999999999876      667899999999999999999655421000      0000000


Q ss_pred             C------------------C-----CCCC--ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        364 L------------------V-----PMDP--SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       364 ~------------------~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      .                  .     ...+  ........+ .....+..+    ....+.++.+|+.+||+.||++|||+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~l~~li~~~L~~~P~~Rpt~  295 (331)
T cd06649         221 GEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYI-VNEPPPKLP----NGVFTPDFQEFVNKCLIKNPAERADL  295 (331)
T ss_pred             cccCCccccCcccccccccccccccccccchhHHHHHHHH-HhCCCcCCC----CccccHHHHHHHHHHccCCcccCCCH
Confidence            0                  0     0000  000001111 111112222    12356789999999999999999999


Q ss_pred             HHHHHH
Q psy14889        419 LRVKKT  424 (443)
Q Consensus       419 ~evl~~  424 (443)
                      .++++.
T Consensus       296 ~ell~h  301 (331)
T cd06649         296 KMLMNH  301 (331)
T ss_pred             HHHhcC
Confidence            999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=5.1e-41  Score=326.81  Aligned_cols=239  Identities=24%  Similarity=0.330  Sum_probs=188.2

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||++..  +|+.||+|++.....    .......|+..+..++||||+++++++...    ..+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~lv~Ey   76 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK----DRLCFVMEY   76 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC----CEEEEEEeC
Confidence            4699999999999987  588999999865321    112223456666669999999999988766    458999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +++|+|..++.. ..+++.++..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++.....
T Consensus        77 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~  148 (328)
T cd05593          77 VNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG--------KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD  148 (328)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence            999999998864 5689999999999999999999998        9999999999999999999999999998753321


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     .....
T Consensus       149 ~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~elltG----------~~Pf~~~-----~~~~~  203 (328)
T cd05593         149 AA----TMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ-----DHEKL  203 (328)
T ss_pred             cc----ccccccCCcCccChhhhcCC------CCCccCCccccchHHHHHhhC----------CCCCCCC-----CHHHH
Confidence            11    11335799999999999766      667899999999999999999          6777653     22222


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                      ...+.  .....+|     ...+.++.+++.+||+.||++||     ++.++++.
T Consensus       204 ~~~~~--~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         204 FELIL--MEDIKFP-----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHhc--cCCccCC-----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            22221  1222333     23567899999999999999997     89998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-41  Score=331.61  Aligned_cols=251  Identities=20%  Similarity=0.274  Sum_probs=192.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||||++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~----~~~   76 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE----NYL   76 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC----CeE
Confidence            3688999999999999999998  588999999865321    111223455556668999999999998876    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  148 (364)
T cd05599          77 YLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL--------GYIHRDIKPDNLLLDAKGHIKLSDFGLC  148 (364)
T ss_pred             EEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCCHHHeEECCCCCEEEeecccc
Confidence            999999999999999864 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCC----------------------------------CCCCCcccccCcccccccccccccCcCCCCCccch
Q psy14889        289 VSYSQLSNKMD----------------------------------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADI  334 (443)
Q Consensus       289 ~~~~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDv  334 (443)
                      +.+........                                  ......+||+.|+|||++...      .++.++||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di  222 (364)
T cd05599         149 TGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT------GYNKECDW  222 (364)
T ss_pred             eeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC------CCCCeeee
Confidence            75432111000                                  001124699999999998765      67789999


Q ss_pred             HHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC
Q psy14889        335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV  414 (443)
Q Consensus       335 wS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  414 (443)
                      |||||++|||++|          ..||....    ..+....... .......+..   ...++++.+++.+|+. +|.+
T Consensus       223 wSlG~il~el~~G----------~~Pf~~~~----~~~~~~~i~~-~~~~~~~~~~---~~~s~~~~~li~~ll~-~p~~  283 (364)
T cd05599         223 WSLGVIMYEMLVG----------YPPFCSDN----PQETYRKIIN-WKETLQFPDE---VPLSPEAKDLIKRLCC-EAER  283 (364)
T ss_pred             ecchhHHHHhhcC----------CCCCCCCC----HHHHHHHHHc-CCCccCCCCC---CCCCHHHHHHHHHHcc-CHhh
Confidence            9999999999999          67776532    1122222221 1122222321   2356789999999996 9999


Q ss_pred             CCc---HHHHHH
Q psy14889        415 RLS---ALRVKK  423 (443)
Q Consensus       415 Rps---~~evl~  423 (443)
                      |++   +.++++
T Consensus       284 R~~~~~~~~ll~  295 (364)
T cd05599         284 RLGNNGVNEIKS  295 (364)
T ss_pred             cCCCCCHHHHhc
Confidence            998   888876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0033|consensus

Probab=100.00  E-value=9.4e-43  Score=304.11  Aligned_cols=248  Identities=25%  Similarity=0.351  Sum_probs=196.8

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.|++.+.||+|.|+.||++..  +|+.+|+|++..+.   ......++|+.+...|+|||||++.+.+...    ...
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~   85 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----SFH   85 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc----cee
Confidence            46899999999999999999987  68999999774321   2222335666666669999999999887655    568


Q ss_pred             EeeecccCcccHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---CcEEEEec
Q psy14889        210 WLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIADF  285 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~~kl~Df  285 (443)
                      |||+|+|.+|+|..-+ .+.-+++..+-.+++||+.+|.|+|++        +|||||+||.|+|+.+.   .-+||+||
T Consensus        86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n--------~IvHRDvkP~nllLASK~~~A~vKL~~F  157 (355)
T KOG0033|consen   86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN--------GIVHRDLKPENLLLASKAKGAAVKLADF  157 (355)
T ss_pred             EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CceeccCChhheeeeeccCCCceeeccc
Confidence            9999999999996544 566688999999999999999999999        99999999999999654   36899999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|..+....     ....++||+.|||||++...      +|+..+||||-||+||-|+.|          ..||++. 
T Consensus       158 GvAi~l~~g~-----~~~G~~GtP~fmaPEvvrkd------py~kpvDiW~cGViLfiLL~G----------~~PF~~~-  215 (355)
T KOG0033|consen  158 GLAIEVNDGE-----AWHGFAGTPGYLSPEVLKKD------PYSKPVDIWACGVILYILLVG----------YPPFWDE-  215 (355)
T ss_pred             ceEEEeCCcc-----ccccccCCCcccCHHHhhcC------CCCCcchhhhhhHHHHHHHhC----------CCCCCCc-
Confidence            9998887322     22567899999999999887      788999999999999999999          7888874 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          +...+.+.+........ ++.|  +..+++.++|+++||..||.+|.|+.|.++
T Consensus       216 ----~~~rlye~I~~g~yd~~-~~~w--~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  216 ----DQHRLYEQIKAGAYDYP-SPEW--DTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             ----cHHHHHHHHhccccCCC-Cccc--CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                22333333322222221 1133  346778999999999999999999999875

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.1e-41  Score=328.00  Aligned_cols=264  Identities=22%  Similarity=0.259  Sum_probs=188.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCC-cccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRN-SCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~~~~~  210 (443)
                      +|++.+.||+|+||.||+|..  +|..||||++....   ........|+..+..++||||+++++++..... ....++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            478899999999999999987  58899999885421   111223456666666999999999998765432 223589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA--------NVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            9999996 689988864 5699999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC--
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM--  367 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~--  367 (443)
                      ......... .......||..|+|||++.+...    .++.++|||||||++|||+||          +.||......  
T Consensus       152 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~----~~~~~~DvwSlGvvl~el~tg----------~~pf~~~~~~~~  216 (338)
T cd07859         152 VAFNDTPTA-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEVLTG----------KPLFPGKNVVHQ  216 (338)
T ss_pred             ccccccCcc-ccccCCCCCCCcCCHHHHhcccc----ccCchhHHHHHHHHHHHHHcC----------CCCCCCCChHHH
Confidence            543322111 11134578999999999865211    566899999999999999999          4455432100  


Q ss_pred             ---------CCChHHHHh--------hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 ---------DPSFDDMRK--------VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ---------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                               .+.......        ...........+....-...+..+.+++.+||+.||++|||+.|+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         217 LDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                     000000000        000000000000000001245678999999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG4257|consensus

Probab=100.00  E-value=9e-42  Score=331.34  Aligned_cols=256  Identities=24%  Similarity=0.413  Sum_probs=206.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC----Cc--eeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH----GE--NVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~--~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++.+.+.+.||.|-||.||+|.++    |+  .||||..+.+..  ....+..|...++.++|||||+++|+|.+..   
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P---  464 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP---  464 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---
Confidence            456778889999999999999983    33  588887765332  2333446667777799999999999998753   


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                        .|+|||+++.|.|..||+.  ..++......++.||+.||+|||+.        ++|||||.++|||+.+...+||+|
T Consensus       465 --~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk--------rfVHRDIAaRNiLVsSp~CVKLaD  534 (974)
T KOG4257|consen  465 --MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK--------RFVHRDIAARNILVSSPQCVKLAD  534 (974)
T ss_pred             --eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh--------chhhhhhhhhheeecCcceeeecc
Confidence              6999999999999999975  5688899999999999999999999        889999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+........   +...-.+.|||||.+.-.      ++|.+||||-|||.+||++.-         +..||.+.
T Consensus       535 FGLSR~~ed~~yYka---S~~kLPIKWmaPESINfR------rFTtASDVWMFgVCmWEIl~l---------GvkPfqgv  596 (974)
T KOG4257|consen  535 FGLSRYLEDDAYYKA---SRGKLPIKWMAPESINFR------RFTTASDVWMFGVCMWEILSL---------GVKPFQGV  596 (974)
T ss_pred             cchhhhccccchhhc---cccccceeecCccccchh------cccchhhHHHHHHHHHHHHHh---------cCCccccc
Confidence            999998876543321   222345689999999876      788999999999999999874         37788876


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ...     ++...+ ..+.+++.|     +.||..++.||.+||.+||.+||.+.++...|..+.+.+
T Consensus       597 kNs-----DVI~~i-EnGeRlP~P-----~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee  653 (974)
T KOG4257|consen  597 KNS-----DVIGHI-ENGERLPCP-----PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE  653 (974)
T ss_pred             ccc-----ceEEEe-cCCCCCCCC-----CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence            432     222222 234555555     459999999999999999999999999999999988743

>KOG0611|consensus

Probab=100.00  E-value=9.2e-42  Score=316.71  Aligned_cols=247  Identities=24%  Similarity=0.346  Sum_probs=201.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---c-hHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---S-WSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ..+..+|++.+.||+|.||.|-+|..  .|+.||||.+++....   + ....+||.++..|+||||+.++.+|...+  
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--  126 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--  126 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--
Confidence            34457899999999999999999976  5999999988654322   1 22235556666699999999999998774  


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                        .+.|||||..+|.|++|+.+ +.|++.++.++++||.+|+.|+|.+        +++|||||.+|||+|.++++||+|
T Consensus       127 --KIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn--------rVvHRDLKLENILLD~N~NiKIAD  196 (668)
T KOG0611|consen  127 --KIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN--------RVVHRDLKLENILLDQNNNIKIAD  196 (668)
T ss_pred             --eEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc--------cceecccchhheeecCCCCeeeec
Confidence              57999999999999999974 7899999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++..+.+...     ..+++|++.|.+||++.+..+.     ++..|-|||||+||-|+.|          ..||.+.
T Consensus       197 FGLSNly~~~kf-----LqTFCGSPLYASPEIvNG~PY~-----GPEVDsWsLGvLLYtLVyG----------tMPFDG~  256 (668)
T KOG0611|consen  197 FGLSNLYADKKF-----LQTFCGSPLYASPEIVNGTPYK-----GPEVDSWSLGVLLYTLVYG----------TMPFDGR  256 (668)
T ss_pred             cchhhhhccccH-----HHHhcCCcccCCccccCCCCCC-----CCccchhhHHHHHHHHhhc----------ccccCCc
Confidence            999977654322     3568999999999999987443     2789999999999999999          8888775


Q ss_pred             CCCCCChHHHHhhhhhcC-CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                           +...+.+.+.... ..|.         .+....-||++||-.||++|.|+.+|...
T Consensus       257 -----Dhk~lvrQIs~GaYrEP~---------~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  257 -----DHKRLVRQISRGAYREPE---------TPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             -----hHHHHHHHhhcccccCCC---------CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence                 3333333333222 2222         33457889999999999999999998764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2.5e-40  Score=365.73  Aligned_cols=259  Identities=20%  Similarity=0.287  Sum_probs=192.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ...+...+.||+|+||.||+|+.  ++..||||.+.....   ..+.|+..+.+++|||||+++|++.+..    ..++|
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~----~~~lv  761 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEK----GAYLI  761 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCC----CCEEE
Confidence            35677788999999999999996  688999998754322   1233455666699999999999998764    46999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |||+++|+|.++++.  ++|..+..++.|+|+||+|||+.+     .++|+||||||+||+++.++.+++. ||.+....
T Consensus       762 ~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~  833 (968)
T PLN00113        762 HEYIEGKNLSEVLRN--LSWERRRKIAIGIAKALRFLHCRC-----SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC  833 (968)
T ss_pred             EeCCCCCcHHHHHhc--CCHHHHHHHHHHHHHHHHHhccCC-----CCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence            999999999999964  899999999999999999999542     4599999999999999999988876 66553322


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .        .....||..|+|||++.+.      .++.++|||||||++|||+||+          .||...........
T Consensus       834 ~--------~~~~~~t~~y~aPE~~~~~------~~~~~sDv~S~Gvvl~el~tg~----------~p~~~~~~~~~~~~  889 (968)
T PLN00113        834 T--------DTKCFISSAYVAPETRETK------DITEKSDIYGFGLILIELLTGK----------SPADAEFGVHGSIV  889 (968)
T ss_pred             c--------CCCccccccccCcccccCC------CCCcccchhhHHHHHHHHHhCC----------CCCCcccCCCCcHH
Confidence            1        1223688999999998876      6778999999999999999994          44432221111111


Q ss_pred             HHHhhhhh-----cCCCCCCCCC-CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        373 DMRKVICI-----DQQRPVLPNR-WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       373 ~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ...+....     ...++.+... ........++.+++.+||+.||++||||.||++.|+++....
T Consensus       890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        890 EWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            11111000     0011111111 112335567889999999999999999999999999987744

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.6e-40  Score=317.36  Aligned_cols=256  Identities=26%  Similarity=0.401  Sum_probs=198.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|.+.+.||+|+||.||++..       ++..+|+|.+...... ......|+..+..++||||+++++++...    .
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~   80 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----D   80 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----C
Confidence            5789999999999999999975       2356899987543322 22234556666669999999999998765    3


Q ss_pred             EEEeeecccCcccHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEE
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRT--------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL  273 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~--------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiL  273 (443)
                      .+++||||+++|+|.+++...              .+++.+++.++.|++.||+|||+.        +++||||||+|||
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~--------~i~H~dlkp~Nil  152 (288)
T cd05093          81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ--------HFVHRDLATRNCL  152 (288)
T ss_pred             ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecccCcceEE
Confidence            479999999999999998532              389999999999999999999998        9999999999999


Q ss_pred             EcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCC
Q psy14889        274 VKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANG  352 (443)
Q Consensus       274 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~  352 (443)
                      +++++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++|||||||++|||++ |     
T Consensus       153 i~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~sDiwslG~il~~l~t~g-----  219 (288)
T cd05093         153 VGENLLVKIGDFGMSRDVYSTDYYR--VGGHTMLPIRWMPPESIMYR------KFTTESDVWSLGVVLWEIFTYG-----  219 (288)
T ss_pred             EccCCcEEeccCCccccccCCceee--cCCCCCccccccCHHHhccC------CCCchhhHHHHHHHHHHHHhCC-----
Confidence            9999999999999997654322111  11223457789999998765      66789999999999999998 6     


Q ss_pred             cccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ..||....     .......+.. ...+..+     ..++.++.+++.+||+.||.+|||+.++++.|+++....
T Consensus       220 -----~~p~~~~~-----~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~  283 (288)
T cd05093         220 -----KQPWYQLS-----NNEVIECITQ-GRVLQRP-----RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS  283 (288)
T ss_pred             -----CCCCCCCC-----HHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence                 56665532     2222222222 1212222     235567999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.6e-40  Score=317.06  Aligned_cols=253  Identities=22%  Similarity=0.277  Sum_probs=188.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|++  +++.||+|++......   ......|+..+..++||||+++++++...    ..++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~   76 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR----GKLY   76 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC----CEEE
Confidence            3688999999999999999998  4789999988654221   12223566666669999999999998765    4589


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||++++.+..+.. ...+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++.
T Consensus        77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~i~H~dlkp~Nill~~~~~~kl~Dfg~~~  148 (287)
T cd07848          77 LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN--------DIVHRDIKPENLLISHNDVLKLCDFGFAR  148 (287)
T ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence            9999999877765554 35689999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||.....   
T Consensus       149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslGvil~el~~g----------~~pf~~~~~---  206 (287)
T cd07848         149 NLSEGSNA---NYTEYVATRWYRSPELLLGA------PYGKAVDMWSVGCILGELSDG----------QPLFPGESE---  206 (287)
T ss_pred             cccccccc---cccccccccccCCcHHHcCC------CCCCchhHHhHHHHHHHHHhC----------CCCCCCCCH---
Confidence            76432211   11234689999999999766      567899999999999999999          555544211   


Q ss_pred             ChHHHHhhhhh--------------cC--CCCCCCCC--------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICI--------------DQ--QRPVLPNR--------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~--------------~~--~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .+........              ..  .....+..        ......+..+.+|+++||+.||++|||++++++
T Consensus       207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         207 -IDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             -HHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence             1111100000              00  00000000        001124567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.4e-40  Score=339.26  Aligned_cols=247  Identities=21%  Similarity=0.340  Sum_probs=193.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--C-CceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--H-GENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~-~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..|.+.+.||+|+||.||+|..  + +..||+|.+....... .....|+..+..++||||+++++++...    ..+++
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~----~~~~l  142 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD----DKLLL  142 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC----CEEEE
Confidence            4599999999999999999986  3 6778888764433322 2234567777779999999999998776    45899


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ||||+++|+|.+++.+     ..+++.++..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--------~ivHrDlkp~NIll~~~~~~kL~DFg  214 (478)
T PTZ00267        143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR--------KMMHRDLKSANIFLMPTGIIKLGDFG  214 (478)
T ss_pred             EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEECCcCHHhEEECCCCcEEEEeCc
Confidence            9999999999988753     3588999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.+......  .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...  
T Consensus       215 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~Pf~~~--  274 (478)
T PTZ00267        215 FSKQYSDSVSL--DVASSFCGTPYYLAPELWERK------RYSKKADMWSLGVILYELLTL----------HRPFKGP--  274 (478)
T ss_pred             CceecCCcccc--ccccccCCCccccCHhHhCCC------CCCcHHhHHHHHHHHHHHHhC----------CCCCCCC--
Confidence            99876542211  112345799999999999776      677899999999999999999          6677542  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ....+...+... .....+     ..++.++.+++.+||+.||++|||+.+++.
T Consensus       275 ---~~~~~~~~~~~~-~~~~~~-----~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        275 ---SQREIMQQVLYG-KYDPFP-----CPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ---CHHHHHHHHHhC-CCCCCC-----ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence               222222222221 112222     235568999999999999999999999864

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.3e-40  Score=328.66  Aligned_cols=253  Identities=19%  Similarity=0.250  Sum_probs=189.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||++..  +++.||||++.....    .......|+..+..++|+||+++++.+.+.    ..+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~----~~~   76 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK----LNL   76 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC----CeE
Confidence            3688999999999999999987  588999999865321    111223455555568999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------givHrDlKp~NILi~~~~~vkL~DFGla  148 (363)
T cd05628          77 YLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL--------GFIHRDIKPDNLLLDSKGHVKLSDFGLC  148 (363)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEecCCCHHHeEECCCCCEEEeeccCc
Confidence            999999999999999864 6799999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcC-------------------------------CCCCCCcccccCcccccccccccccCcCCCCCccchHHH
Q psy14889        289 VSYSQLSNKM-------------------------------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL  337 (443)
Q Consensus       289 ~~~~~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~  337 (443)
                      +.+.......                               .......+||+.|+|||++.+.      .++.++|||||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~------~~~~~~DvwSl  222 (363)
T cd05628         149 TGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT------GYNKLCDWWSL  222 (363)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC------CCCCchhhhhh
Confidence            7653211000                               0001235799999999999876      66789999999


Q ss_pred             HHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhc--CCcCCC
Q psy14889        338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWH--QNANVR  415 (443)
Q Consensus       338 Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~R  415 (443)
                      ||++|||++|          ..||.+..     .......+........+|..   ...+.++.+++.+++.  .++..|
T Consensus       223 Gvil~ell~G----------~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~~~~~~r~~r  284 (363)
T cd05628         223 GVIMYEMLIG----------YPPFCSET-----PQETYKKVMNWKETLIFPPE---VPISEKAKDLILRFCCEWEHRIGA  284 (363)
T ss_pred             HHHHHHHHhC----------CCCCCCCC-----HHHHHHHHHcCcCcccCCCc---CCCCHHHHHHHHHHcCChhhcCCC
Confidence            9999999999          77776532     22222222221122223321   1245678888888654  233456


Q ss_pred             CcHHHHHHH
Q psy14889        416 LSALRVKKT  424 (443)
Q Consensus       416 ps~~evl~~  424 (443)
                      |+++||++.
T Consensus       285 ~~~~ei~~h  293 (363)
T cd05628         285 PGVEEIKTN  293 (363)
T ss_pred             CCHHHHhCC
Confidence            899999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-41  Score=329.83  Aligned_cols=252  Identities=23%  Similarity=0.322  Sum_probs=195.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|..  +|+.||||++....    ........|+..+..++||||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~   76 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE----EHL   76 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC----CeE
Confidence            3688999999999999999998  48999999986532    1122233455556668999999999988765    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------giiH~Dlkp~NIll~~~~~~kL~Dfg~~  148 (350)
T cd05573          77 YLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL--------GFIHRDIKPDNILIDADGHIKLADFGLC  148 (350)
T ss_pred             EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHeEECCCCCEEeecCCCC
Confidence            999999999999999965 5799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCC-------------------------cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        289 VSYSQLSN-------------------------KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       289 ~~~~~~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      ........                         ..........||+.|+|||++.+.      .++.++|||||||++||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~e  222 (350)
T cd05573         149 KKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT------PYGLECDWWSLGVILYE  222 (350)
T ss_pred             ccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC------CCCCceeeEecchhhhh
Confidence            76654320                         000112345799999999999876      67789999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-HHHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-ALRVK  422 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl  422 (443)
                      |++|          ..||....    ......+... ......+|..   ...+.++.+++.+||. ||.+||+ +.+++
T Consensus       223 ll~g----------~~Pf~~~~----~~~~~~~i~~-~~~~~~~p~~---~~~~~~~~~li~~ll~-dp~~R~~s~~~ll  283 (350)
T cd05573         223 MLYG----------FPPFYSDT----LQETYNKIIN-WKESLRFPPD---PPVSPEAIDLICRLLC-DPEDRLGSFEEIK  283 (350)
T ss_pred             hccC----------CCCCCCCC----HHHHHHHHhc-cCCcccCCCC---CCCCHHHHHHHHHHcc-ChhhcCCCHHHHh
Confidence            9999          67776532    1122222221 1112222221   1256789999999997 9999999 99998


Q ss_pred             HH
Q psy14889        423 KT  424 (443)
Q Consensus       423 ~~  424 (443)
                      +.
T Consensus       284 ~h  285 (350)
T cd05573         284 SH  285 (350)
T ss_pred             cC
Confidence            74

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.5e-40  Score=314.41  Aligned_cols=255  Identities=21%  Similarity=0.423  Sum_probs=197.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||+||+|.+  +|+    .||+|++.......  .....|+..+..++||||+++++++....    
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----   82 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST----   82 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC----
Confidence            5789999999999999999987  444    48999886543222  22235566666689999999999987542    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++++||+++|+|.+++..  ..+++..++.++.|++.||+|||+.        +|+||||||+|||+++++.+||+||
T Consensus        83 -~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~iiH~dlkp~Nil~~~~~~~kL~df  153 (279)
T cd05109          83 -VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV--------RLVHRDLAARNVLVKSPNHVKITDF  153 (279)
T ss_pred             -cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccccceEEEcCCCcEEECCC
Confidence             4799999999999999964  4689999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++..........  .....++..|+|||.+.+.      .++.++|||||||++|||++ |          ..||...
T Consensus       154 G~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~el~t~g----------~~p~~~~  215 (279)
T cd05109         154 GLARLLDIDETEYH--ADGGKVPIKWMALESILHR------RFTHQSDVWSYGVTVWELMTFG----------AKPYDGI  215 (279)
T ss_pred             Cceeecccccceee--cCCCccchhhCCHHHhccC------CCCchhHHHHHHHHHHHHHcCC----------CCCCCCC
Confidence            99987653222111  1122356789999998765      66789999999999999998 6          5666543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ........+.. ...+..+     ..++..+.+++.+||+.||++||++.++++.|+++....
T Consensus       216 -----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         216 -----PAREIPDLLEK-GERLPQP-----PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             -----CHHHHHHHHHC-CCcCCCC-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence                 12223333322 2222222     235678999999999999999999999999999987655

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.9e-40  Score=312.98  Aligned_cols=254  Identities=23%  Similarity=0.381  Sum_probs=198.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||.+.....    .......|+..+..++||||+++++++.+.    ...
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   77 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED----NEL   77 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC----CeE
Confidence            5789999999999999999987  689999998754221    112234566667779999999999998765    357


Q ss_pred             EeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++|+||+++|+|.+++.     ...+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.++|+|
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~dl~~~nil~~~~~~~~l~d  149 (267)
T cd08228          78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR--------RVMHRDIKPANVFITATGVVKLGD  149 (267)
T ss_pred             EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC--------CeeCCCCCHHHEEEcCCCCEEECc
Confidence            99999999999998884     24588999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.........    .....|+..|+|||.+.+.      .++.++|+||||+++|||++|          ..||...
T Consensus       150 ~g~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~------~~~~~~Di~slG~~l~el~~g----------~~p~~~~  209 (267)
T cd08228         150 LGLGRFFSSKTTA----AHSLVGTPYYMSPERIHEN------GYNFKSDIWSLGCLLYEMAAL----------QSPFYGD  209 (267)
T ss_pred             cccceeccchhHH----HhcCCCCccccChhhhccC------CCCchhhHHHHHHHHHHHhcC----------CCCCccc
Confidence            9998766532211    1234688899999998765      566899999999999999999          5666442


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ..   ........+.. ...+..+    ....+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus       210 ~~---~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         210 KM---NLFSLCQKIEQ-CDYPPLP----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             cc---cHHHHHHHHhc-CCCCCCC----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            11   11222222221 1222222    1235577999999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=3.9e-41  Score=328.02  Aligned_cols=254  Identities=21%  Similarity=0.258  Sum_probs=194.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +|+.||+|++.....    .....+.|+..+..++|+||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~----~~~   76 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK----DNL   76 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC----CeE
Confidence            3688999999999999999987  688999999865422    122234455555568999999999988765    457


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+++|+|.+++++  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------~i~H~Dlkp~NIll~~~~~~kL~Dfg~  148 (330)
T cd05601          77 YLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM--------GYVHRDIKPENVLIDRTGHIKLADFGS  148 (330)
T ss_pred             EEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEcccCchHheEECCCCCEEeccCCC
Confidence            999999999999999975  5799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +..+......   ......||+.|+|||++..........++.++|||||||++|||++|          ..||....  
T Consensus       149 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g----------~~Pf~~~~--  213 (330)
T cd05601         149 AARLTANKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYG----------RSPFHEGT--  213 (330)
T ss_pred             CeECCCCCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccC----------CCCCCCCC--
Confidence            9766532221   11234689999999998743221112567899999999999999999          67776532  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ......+... .......+.   ....+..+.+|+.+||. ||.+|||+.++++
T Consensus       214 --~~~~~~~i~~-~~~~~~~~~---~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         214 --SAKTYNNIMN-FQRFLKFPE---DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             --HHHHHHHHHc-CCCccCCCC---CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence              1122222221 111122222   12356779999999998 9999999999885

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.1e-40  Score=331.10  Aligned_cols=252  Identities=21%  Similarity=0.270  Sum_probs=189.6

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .|++.+.||+|+||+||+|+.  +++.||||++.....    .......|+..+..++||||+++++++.+.    ..++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~----~~~~   77 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK----DNLY   77 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC----CEEE
Confidence            588899999999999999988  578999999865421    111223455555669999999999998876    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~--------givHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626          78 FVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM--------GFIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            99999999999999865 5689999999999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCc-------------------------------------------CCCCCCCcccccCcccccccccccccCcC
Q psy14889        290 SYSQLSNK-------------------------------------------MDIPPNPRVGTKRYMSPEILDESINMDCF  326 (443)
Q Consensus       290 ~~~~~~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  326 (443)
                      .+......                                           .........||+.|+|||++.+.      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------  223 (381)
T cd05626         150 GFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK------  223 (381)
T ss_pred             ccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC------
Confidence            43211000                                           00001235799999999999765      


Q ss_pred             CCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHH
Q psy14889        327 ESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE  406 (443)
Q Consensus       327 ~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  406 (443)
                      .++.++|||||||++|||+||          ..||.....    .+....... .......+..   ...+.++.+++.+
T Consensus       224 ~~~~~~DiwSlG~il~elltG----------~~Pf~~~~~----~~~~~~i~~-~~~~~~~~~~---~~~s~~~~dli~~  285 (381)
T cd05626         224 GYTQLCDWWSVGVILFEMLVG----------QPPFLAPTP----TETQLKVIN-WENTLHIPPQ---VKLSPEAVDLITK  285 (381)
T ss_pred             CCCCccceeehhhHHHHHHhC----------CCCCcCCCH----HHHHHHHHc-cccccCCCCC---CCCCHHHHHHHHH
Confidence            667899999999999999999          677765321    122222221 1122222221   2255678899998


Q ss_pred             --HhcCCcCCCCcHHHHHHH
Q psy14889        407 --CWHQNANVRLSALRVKKT  424 (443)
Q Consensus       407 --cl~~dP~~Rps~~evl~~  424 (443)
                        |+..+|..||++.++++.
T Consensus       286 ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         286 LCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HccCcccccCCCCHHHHhcC
Confidence              445666679999999873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.1e-40  Score=329.27  Aligned_cols=255  Identities=18%  Similarity=0.246  Sum_probs=195.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|++.+.||+|+||.||++..  +++.||+|++.....    .......|+..+..++||||+++++++.+.    ..
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----~~  117 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD----KY  117 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CE
Confidence            36899999999999999999998  578999998854211    111223445555559999999999998766    46


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +++||||+++|+|.+++....+++.++..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~--------~IvHrDLKp~NILl~~~~~~kL~DFG~a  189 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM--------GLIHRDVKPDNMLLDKHGHLKLADFGTC  189 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHEEECCCCCEEEEecccc
Confidence            89999999999999999888899999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........   .......||+.|+|||++.+.....  .++.++|||||||++|||++|          ..||....   
T Consensus       190 ~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~--~~~~~~DiwSlG~ilyell~G----------~~Pf~~~~---  251 (370)
T cd05621         190 MKMDETGM---VRCDTAVGTPDYISPEVLKSQGGDG--YYGRECDWWSVGVFLFEMLVG----------DTPFYADS---  251 (370)
T ss_pred             eecccCCc---eecccCCCCcccCCHHHHhccCCCC--CCCcccCEEeehHHHHHHHhC----------CCCCCCCC---
Confidence            76543211   1123457999999999997642111  366899999999999999999          77776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                       ......++. .......+|..   ...+..+.+++..|+..++.+  |+|+.|+++.
T Consensus       252 -~~~~~~~i~-~~~~~~~~p~~---~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         252 -LVGTYSKIM-DHKNSLNFPED---VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             -HHHHHHHHH-hCCcccCCCCc---ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence             122222322 22222333321   235677899999999865543  8899998875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=5.8e-41  Score=326.10  Aligned_cols=239  Identities=23%  Similarity=0.335  Sum_probs=187.1

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||++..  +|+.||+|++.....    .......|+..+..++||||+++++++...    ..+++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~----~~~~lv~E~   76 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----DRLCFVMEY   76 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC----CEEEEEEeC
Confidence            4699999999999987  688999999865321    112223455556668999999999988766    458999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      +++|+|..++.+ ..+++..+..++.||+.||.|||+ .        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--------~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~  148 (325)
T cd05594          77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--------NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  148 (325)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC--------CEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence            999999998864 568999999999999999999997 5        999999999999999999999999999865332


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ....    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ..+.
T Consensus       149 ~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~tG----------~~Pf~~~-----~~~~  203 (325)
T cd05594         149 DGAT----MKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ-----DHEK  203 (325)
T ss_pred             CCcc----cccccCCcccCCHHHHccC------CCCCccccccccceeeeeccC----------CCCCCCC-----CHHH
Confidence            1111    1234699999999999776      667899999999999999999          6777553     2223


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                      ....+..  ....++     ...+.++.+++.+||+.||++|+     ++.++++.
T Consensus       204 ~~~~i~~--~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         204 LFELILM--EEIRFP-----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHHhc--CCCCCC-----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            3333221  122233     23556799999999999999997     89998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-40  Score=312.11  Aligned_cols=252  Identities=27%  Similarity=0.423  Sum_probs=197.2

Q ss_pred             ccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|.+.     ...||||.+......  ......|+..+..++||||+++++++...    ..
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   79 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS----RP   79 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC----Cc
Confidence            57899999999999999999873     347999987643322  22234566666679999999999988765    34


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++|||+++|+|.+++..  ..+++..++.++.|++.||.|||+.        +|+|+||||+|||+++++.+||+|||
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~--------~i~H~di~p~nili~~~~~~~l~dfg  151 (266)
T cd05033          80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM--------NYVHRDLAARNILVNSNLVCKVSDFG  151 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCcceEEEcCCCCEEECccc
Confidence            7999999999999999864  4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      +++..........  .....++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.+. 
T Consensus       152 ~~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~------~~~~~~Dv~slG~~l~~l~~~g----------~~p~~~~-  212 (266)
T cd05033         152 LSRRLEDSEATYT--TKGGKIPIRWTAPEAIAYR------KFTSASDVWSFGIVMWEVMSYG----------ERPYWDM-  212 (266)
T ss_pred             hhhccccccccee--ccCCCCCccccChhhhccC------CCccccchHHHHHHHHHHHccC----------CCCCCCC-
Confidence            9987652221111  1122456789999998765      66789999999999999998 7          6677653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                          ........+.. ......+     ..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       213 ----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         213 ----SNQDVIKAVED-GYRLPPP-----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             ----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                22333333322 1122222     23567899999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.3e-40  Score=322.21  Aligned_cols=236  Identities=23%  Similarity=0.373  Sum_probs=183.0

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|..  +++.||+|++.....      .....|.++... ..+||||+++++++...    ..+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~hp~i~~~~~~~~~~----~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLAL-AWEHPFLTHLFCTFQTK----EHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-ccCCCCccceeeEEEcC----CEEEEEE
Confidence            4699999999999998  477899998865321      111223333322 25899999999998765    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--------~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~  147 (316)
T cd05592          76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK--------GIIYRDLKLDNVLLDKDGHIKIADFGMCKENM  147 (316)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence            99999999998864 5799999999999999999999998        99999999999999999999999999997543


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       148 ~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~ell~G----------~~Pf~~~-----~~~  202 (316)
T cd05592         148 NGEG----KASTFCGTPDYIAPEILKGQ------KYNESVDWWSFGVLLYEMLIG----------QSPFHGE-----DED  202 (316)
T ss_pred             CCCC----ccccccCCccccCHHHHcCC------CCCCcccchhHHHHHHHHHhC----------CCCCCCC-----CHH
Confidence            2211    12345799999999999876      667899999999999999999          6777653     222


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH-HHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL-RVK  422 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl  422 (443)
                      .+...+.  ...+.++     ..++.++.+++.+||+.||++||++. +++
T Consensus       203 ~~~~~i~--~~~~~~~-----~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         203 ELFDSIL--NDRPHFP-----RWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHHHH--cCCCCCC-----CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            3322222  2233333     23556789999999999999999875 454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.6e-40  Score=312.82  Aligned_cols=254  Identities=21%  Similarity=0.342  Sum_probs=190.3

Q ss_pred             ccccceeeeecCeEEEEEEEC--Cc--eeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC--cccE
Q psy14889        138 ISLSECIGKGRYGEVWRGVWH--GE--NVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQ  208 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~--~~--~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~  208 (443)
                      |.+.+.||+|+||.||+|.+.  +.  .||+|.+.....   .......|+..+..++|+||+++++++.....  ....
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            356788999999999999983  32  589998754321   11122345555666999999999998754321  1234


Q ss_pred             EEeeecccCcccHHHHhc-------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        209 LWLVTHYHSFGSLYDHLN-------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                      .+++|||+++|+|.+++.       ...+++..+..++.|++.||+|||+.        +|+||||||+|||+++++.+|
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~k  152 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK--------SFIHRDLAARNCMLNENMNVC  152 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccchhheEEcCCCCEE
Confidence            689999999999999873       13478999999999999999999998        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAP  360 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P  360 (443)
                      |+|||+++.........  ......+++.|+|||.+.+.      .++.++||||||+++|||++ |          ..|
T Consensus       153 l~Dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~------~~~~~~Di~slG~il~el~~~g----------~~p  214 (272)
T cd05075         153 VADFGLSKKIYNGDYYR--QGRIAKMPVKWIAIESLADR------VYTTKSDVWSFGVTMWEIATRG----------QTP  214 (272)
T ss_pred             ECCCCcccccCccccee--cCCcccCCcccCCHHHccCC------CcChHHHHHHHHHHHHHHHcCC----------CCC
Confidence            99999997664322111  11223456789999998765      66789999999999999999 5          567


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      |...     ........+.. ...+..+     ..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       215 ~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         215 YPGV-----ENSEIYDYLRQ-GNRLKQP-----PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCC-----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            7553     11222222221 1222222     23567799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.8e-40  Score=310.04  Aligned_cols=247  Identities=28%  Similarity=0.513  Sum_probs=194.8

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||++...|..||+|.+..... ......|+..+..++|+|++++++++....   ...++++||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~lv~e~   81 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQLLGVIVEEK---GGLYIVTEY   81 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCch-HHHHHHHHHHHHhCCCCCeeeEEEEEEcCC---CceEEEEEC
Confidence            5788999999999999999999999999998754322 222344555666699999999999865443   247999999


Q ss_pred             cCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++|+|.+++...   .+++..++.++.|++.||+|||+.        +++||||||+||++++++.+||+|||+++...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN--------NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeccccchheEEEcCCCcEEecCCccceecc
Confidence            9999999998642   478999999999999999999998        99999999999999999999999999987544


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ...       ....++..|+|||++.+.      .++.++|||||||++|||++ |          ..||...     ..
T Consensus       154 ~~~-------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~i~~~l~~~g----------~~p~~~~-----~~  205 (256)
T cd05082         154 STQ-------DTGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFG----------RVPYPRI-----PL  205 (256)
T ss_pred             ccC-------CCCccceeecCHHHHccC------CCCchhhhHHHHHHHHHHHhCC----------CCCCCCC-----CH
Confidence            321       122345689999998765      66789999999999999998 7          5666542     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ......+... ..+..+     +.++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       206 ~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         206 KDVVPRVEKG-YKMDAP-----DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHhcC-CCCCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            3333333221 122222     34667899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.6e-40  Score=315.44  Aligned_cols=254  Identities=21%  Similarity=0.374  Sum_probs=192.9

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      ..++|++.+.||+|+||.||+|.+.       +..||||.+......  ......|+..+..++||||+++++++...  
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~--   81 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG--   81 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence            3478999999999999999999863       357999987543221  11223455566669999999999998665  


Q ss_pred             cccEEEeeecccCcccHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR-----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL  273 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiL  273 (443)
                        ...++||||+++|+|.+++.+           ..+++..+..++.|++.||.|||+.        +++|+||||+||+
T Consensus        82 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~~vH~dlkp~Nil  151 (277)
T cd05062          82 --QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN--------KFVHRDLAARNCM  151 (277)
T ss_pred             --CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCcchheEE
Confidence              347999999999999999854           1357788999999999999999998        9999999999999


Q ss_pred             EcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc
Q psy14889        274 VKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI  353 (443)
Q Consensus       274 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~  353 (443)
                      +++++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++|||||||++|||+++.     
T Consensus       152 ~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~~-----  218 (277)
T cd05062         152 VAEDFTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDG------VFTTYSDVWSFGVVLWEIATLA-----  218 (277)
T ss_pred             EcCCCCEEECCCCCccccCCcceee--cCCCCccCHhhcChhHhhcC------CcCchhHHHHHHHHHHHHHcCC-----
Confidence            9999999999999987654322211  11223457789999998765      6678999999999999999941     


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                          ..||.+.     ........+.. ...+..+     ..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus       219 ----~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         219 ----EQPYQGM-----SNEQVLRFVME-GGLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             ----CCCCCCC-----CHHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence                5566543     22233332221 1222222     3356789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.6e-40  Score=317.44  Aligned_cols=254  Identities=26%  Similarity=0.357  Sum_probs=185.3

Q ss_pred             ccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCcc-----chHHHHHHHH-HHhccCCCceeeeeeccccC-Cc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEA-----SWSRETEIYS-TVLLRHENILGYIGSDMTSR-NS  205 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~~-----~~~~e~ei~~-~~~l~H~nIv~l~g~~~~~~-~~  205 (443)
                      ++|++.+.||+|+||.||+|+.   .++.||+|++......     ...+|.++.. +..++||||+++++++.... ..
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            3688999999999999999987   3678999988643221     2223333322 22357999999999875321 12


Q ss_pred             ccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                      ...+++||||+. ++|.+++..   ..+++.++..++.||+.||.|||+.        +|+||||||+|||++.++.+||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--------~iiH~dlkp~Nil~~~~~~~kl  151 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--------RVVHRDLKPQNILVTSSGQIKL  151 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCHHHEEEcCCCCEEE
Confidence            245899999997 699998854   4589999999999999999999998        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+++......     ......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||.
T Consensus       152 ~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~~f~  210 (290)
T cd07862         152 ADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR----------KPLFR  210 (290)
T ss_pred             ccccceEeccCCc-----ccccccccccccChHHHhCC------CCCCccchHHHHHHHHHHHcC----------CCCcC
Confidence            9999997654321     12345689999999998765      667899999999999999999          45554


Q ss_pred             CCCCCCCChHHHHhhhhhcCC-------------------CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQ-------------------RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +..    ..+.+...+.....                   .+..+........+..+.+++.+||+.||++|||+.|+++
T Consensus       211 ~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         211 GSS----DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CCC----HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            421    11222222111000                   0000000001234567899999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2e-40  Score=311.23  Aligned_cols=249  Identities=25%  Similarity=0.443  Sum_probs=193.4

Q ss_pred             ccccccceeeeecCeEEEEEEECC-ceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHG-ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||.||+|.+.+ ..+|+|.+............|+..+..++||||+++++++....    .+++|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e   79 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR----PIYIVTE   79 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC----CcEEEEE
Confidence            578899999999999999998854 46999987654332223345666666799999999999987653    3699999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+.+|+|.+++..  ..+++.+++.++.||+.||.|||+.        +++|+||||+||+++.++.+||+|||+++...
T Consensus        80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~  151 (256)
T cd05113          80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK--------QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL  151 (256)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccccCcceEEEcCCCCEEECCCccceecC
Confidence            9999999999864  3689999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......   .....++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||....     .
T Consensus       152 ~~~~~~---~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~~l~~~g----------~~p~~~~~-----~  207 (256)
T cd05113         152 DDEYTS---SVGSKFPVRWSPPEVLLYS------KFSSKSDVWAFGVLMWEVYSLG----------KMPYERFN-----N  207 (256)
T ss_pred             CCceee---cCCCccChhhCCHHHHhcC------cccchhHHHHHHHHHHHHhcCC----------CCCcCcCC-----H
Confidence            322111   1223456789999999765      56689999999999999998 7          56665431     1


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ......+.. ..++..+     ...+..+.+++.+||+.||.+|||+.++++.|+
T Consensus       208 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         208 SETVEKVSQ-GLRLYRP-----HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            222222221 2222222     224578999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.7e-40  Score=317.32  Aligned_cols=252  Identities=22%  Similarity=0.294  Sum_probs=186.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|..  ++..||+|++......  ......|+..+..++||||+++++++.+.    ...++
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~l   80 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE----RCLTL   80 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC----CeEEE
Confidence            5799999999999999999987  5789999988643221  22233566666679999999999998765    35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||++ |+|.+++..  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        81 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~dlkp~Nil~~~~~~~kl~DfG~~~  151 (288)
T cd07871          81 VFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR--------KILHRDLKPQNLLINEKGELKLADFGLAR  151 (288)
T ss_pred             EEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEECCCCCEEECcCccee
Confidence            999998 499998854  3478999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .......    ......||+.|+|||.+.+..     .++.++|||||||++|||+||          ..||....    
T Consensus       152 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~~l~~l~~g----------~~pf~~~~----  208 (288)
T cd07871         152 AKSVPTK----TYSNEVVTLWYRPPDVLLGST-----EYSTPIDMWGVGCILYEMATG----------RPMFPGST----  208 (288)
T ss_pred             eccCCCc----cccCceecccccChHHhcCCc-----ccCcHHHHHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            5432211    123346889999999986531     466899999999999999999          44554321    


Q ss_pred             ChHHHHhhhhhcCC----------------CCCCCC----CC--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQ----------------RPVLPN----RW--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~----------------~~~~~~----~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+.........                ....+.    .+  .....+.++.+|+.+||+.||.+|||++|+++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         209 VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            01111111000000                000000    00  01124567899999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.7e-40  Score=316.24  Aligned_cols=256  Identities=25%  Similarity=0.378  Sum_probs=198.1

Q ss_pred             ccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|.+.+.||+|+||.||+|+..       +..+++|.+...... ....+.|+..+..++|+||+++++++...    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~   80 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----D   80 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC----C
Confidence            56888999999999999999852       346888987544322 12234566666669999999999998765    3


Q ss_pred             EEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSK  270 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~  270 (443)
                      ..++||||+++++|.+++..                 ..+++..++.++.||+.||+|||++        +|+||||||+
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--------~i~H~dlkp~  152 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ--------HFVHRDLATR  152 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecccCcc
Confidence            47999999999999999853                 2378999999999999999999998        9999999999


Q ss_pred             CEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-ccc
Q psy14889        271 NILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTK  349 (443)
Q Consensus       271 NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~  349 (443)
                      |||++.++.+||+|||++.........  .......++..|+|||.+.+.      .++.++||||||+++|||+| |  
T Consensus       153 Nil~~~~~~~~l~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~t~g--  222 (291)
T cd05094         153 NCLVGANLLVKIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYR------KFTTESDVWSFGVILWEIFTYG--  222 (291)
T ss_pred             eEEEccCCcEEECCCCcccccCCCcee--ecCCCCCcceeecChHHhccC------CCCchhhHHHHHHHHHHHHhCC--
Confidence            999999999999999999765432211  111234567889999998766      66789999999999999999 7  


Q ss_pred             CCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        350 ANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       350 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                              ..||....     .......+. ....+..+     ..++..+.+++.+||+.||++|||+.+|++.|+++.
T Consensus       223 --------~~p~~~~~-----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         223 --------KQPWFQLS-----NTEVIECIT-QGRVLERP-----RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             --------CCCCCCCC-----HHHHHHHHh-CCCCCCCC-----ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence                    66765532     122222221 11222222     235678999999999999999999999999999997


Q ss_pred             hcc
Q psy14889        430 CAD  432 (443)
Q Consensus       430 ~~~  432 (443)
                      ...
T Consensus       284 ~~~  286 (291)
T cd05094         284 KAT  286 (291)
T ss_pred             hhc
Confidence            654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.4e-40  Score=315.20  Aligned_cols=251  Identities=22%  Similarity=0.380  Sum_probs=193.7

Q ss_pred             ccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+      .+..||+|.+.......  ...+.|+..+..++||||+++++++....    
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----   80 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ----   80 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence            5788899999999999999985      35689999886433221  22345666666799999999999987663    


Q ss_pred             EEEeeecccCcccHHHHhcc------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                      ..++||||+++|+|.+++..                  ..+++.+++.++.|++.||.|||+.        +++||||||
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--------~i~H~dlkp  152 (283)
T cd05090          81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH--------FFVHKDLAA  152 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc--------Ceehhcccc
Confidence            46999999999999999842                  2478889999999999999999998        999999999


Q ss_pred             CCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cc
Q psy14889        270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RT  348 (443)
Q Consensus       270 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~  348 (443)
                      +|||+++++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++||||||+++|||++ | 
T Consensus       153 ~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~~g-  223 (283)
T cd05090         153 RNILIGEQLHVKISDLGLSREIYSADYYR--VQPKSLLPIRWMPPEAIMYG------KFSSDSDIWSFGVVLWEIFSFG-  223 (283)
T ss_pred             ceEEEcCCCcEEeccccccccccCCccee--cccCCCccceecChHHhccC------CCCchhhhHHHHHHHHHHHcCC-
Confidence            99999999999999999997654322111  11233466789999998765      56789999999999999998 6 


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                               ..||...     ....+...+... ..+..+     ..++..+.+++.+||+.||++||++.+|++.|..
T Consensus       224 ---------~~p~~~~-----~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         224 ---------LQPYYGF-----SNQEVIEMVRKR-QLLPCS-----EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ---------CCCCCCC-----CHHHHHHHHHcC-CcCCCC-----CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                     5676553     122333333221 112222     3366789999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.4e-40  Score=324.47  Aligned_cols=249  Identities=23%  Similarity=0.341  Sum_probs=189.0

Q ss_pred             cccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCc-----cchHHHHHHHHHHhc-cCCCceeeeeeccccCCc
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE-----ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNS  205 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~  205 (443)
                      +|++.+.||+|+||.||+++.     +++.||+|++.....     .......|+..+..+ +|+||+++++++...   
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~---   77 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE---   77 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC---
Confidence            478899999999999999875     478999998864321     111223444445456 599999999988765   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..+++||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        78 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivHrDlkp~Nili~~~~~~kl~D  148 (332)
T cd05614          78 -AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL--------GIVYRDIKLENILLDSEGHVVLTD  148 (332)
T ss_pred             -CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcEecCCCHHHeEECCCCCEEEee
Confidence             457999999999999999854 5799999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++........   ......||+.|+|||++.+..     .++.++|||||||++|||+||          ..||...
T Consensus       149 fG~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwslG~il~elltg----------~~pf~~~  210 (332)
T cd05614         149 FGLSKEFLSEEKE---RTYSFCGTIEYMAPEIIRGKG-----GHGKAVDWWSLGILIFELLTG----------ASPFTLE  210 (332)
T ss_pred             CcCCccccccCCC---ccccccCCccccCHHHhcCCC-----CCCCccccccchhhhhhhhcC----------CCCCCCC
Confidence            9999765332211   122357999999999987542     355789999999999999999          6666532


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .. ......+...+.  ...+.++     ...+..+.+++.+||+.||++||     +++++++
T Consensus       211 ~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         211 GE-RNTQSEVSRRIL--KCDPPFP-----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CC-CCCHHHHHHHHh--cCCCCCC-----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            21 112223322221  1223333     23556799999999999999999     7777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.5e-40  Score=322.92  Aligned_cols=238  Identities=26%  Similarity=0.383  Sum_probs=185.8

Q ss_pred             ceeeeecCeEEEEEEE-----CCceeEEEEeeccCc-----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        142 ECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE-----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.||+|+||.||+++.     .++.||||++.....     .......|+..+..++||||+++++++...    ..+++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~----~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG----GKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC----CeEEE
Confidence            6799999999999975     467899999864321     112224556666669999999999998766    45899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||+++|+|.+++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++.
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          78 ILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ--------GIIYRDLKPENILLDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             EEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence            9999999999999864 5678899999999999999999998        999999999999999999999999999865


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....    .
T Consensus       150 ~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~G----------~~pf~~~~----~  205 (323)
T cd05584         150 SIHEGT----VTHTFCGTIEYMAPEILMRS------GHGKAVDWWSLGALMYDMLTG----------APPFTAEN----R  205 (323)
T ss_pred             cccCCC----cccccCCCccccChhhccCC------CCCCcceecccHHHHHHHhcC----------CCCCCCCC----H
Confidence            432211    12335799999999999765      566899999999999999999          66776531    1


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      ........   .....++     ...+..+.+++.+||+.||++||     ++.++++
T Consensus       206 ~~~~~~~~---~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         206 KKTIDKIL---KGKLNLP-----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHHHH---cCCCCCC-----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            12222222   1222233     23556799999999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0580|consensus

Probab=100.00  E-value=9.9e-42  Score=297.09  Aligned_cols=241  Identities=26%  Similarity=0.426  Sum_probs=197.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|-||.||.|+.  ++-.||+|++.+...      ....+|.||.  ..|+||||+++|+++.+.    .
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIq--s~L~hpnilrlY~~fhd~----~   95 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQ--SHLRHPNILRLYGYFHDS----K   95 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEee--cccCCccHHhhhhheecc----c
Confidence            6899999999999999999998  467899999866432      2333344444  449999999999999988    4


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..||++||.+.|+|...|..   .++++.....++.|+|.||.|+|..        ++|||||||+|+|++..+.+||+|
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k--------~VIhRdiKpenlLlg~~~~lkiAd  167 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK--------RVIHRDIKPENLLLGSAGELKIAD  167 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC--------CcccCCCCHHHhccCCCCCeeccC
Confidence            58999999999999999973   4699999999999999999999988        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||-+..-..  +    ...+.+||..|.+||+..+.      ..+...|+|++|++.||++.|          ..||...
T Consensus       168 fGwsV~~p~--~----kR~tlcgt~dyl~pEmv~~~------~hd~~Vd~w~lgvl~yeflvg----------~ppFes~  225 (281)
T KOG0580|consen  168 FGWSVHAPS--N----KRKTLCGTLDYLPPEMVEGR------GHDKFVDLWSLGVLCYEFLVG----------LPPFESQ  225 (281)
T ss_pred             CCceeecCC--C----CceeeecccccCCHhhcCCC------CccchhhHHHHHHHHHHHHhc----------CCchhhh
Confidence            999865442  1    22567999999999999987      666899999999999999999          6777764


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .    ..+..+++...+   ..+|     ..++.++.++|.+|+..+|.+|.+..|+++.
T Consensus       226 ~----~~etYkrI~k~~---~~~p-----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  226 S----HSETYKRIRKVD---LKFP-----STISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             h----hHHHHHHHHHcc---ccCC-----cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            3    222333333222   2233     3466789999999999999999999998763

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.9e-40  Score=315.17  Aligned_cols=251  Identities=25%  Similarity=0.401  Sum_probs=195.0

Q ss_pred             ccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|.+.+.||+|+||.||+|...       +..||||.+......  ......|+..+..++|+||+++++++...    
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----   80 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG----   80 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC----
Confidence            57889999999999999999762       368999988654332  22334555566669999999999998776    


Q ss_pred             cEEEeeecccCcccHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR---------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~---------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      ...++||||+++|+|.+++..               ..+++..+..++.|++.||.|||+.        +++||||||+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~--------~i~h~dlkp~n  152 (280)
T cd05049          81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ--------HFVHRDLATRN  152 (280)
T ss_pred             CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC--------Ceeccccccce
Confidence            347999999999999999853               2378889999999999999999998        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      |+++.++.+||+|||+++........  .......+++.|+|||++.+.      .++.++||||||+++|||++ |   
T Consensus       153 ili~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~e~~~~g---  221 (280)
T cd05049         153 CLVGYDLVVKIGDFGMSRDVYTTDYY--RVGGHTMLPIRWMPPESIMYR------KFTTESDVWSFGVVLWEIFTYG---  221 (280)
T ss_pred             EEEcCCCeEEECCcccceecccCcce--ecCCCCcccceecChhhhccC------CcchhhhHHHHHHHHHHHHhcC---
Confidence            99999999999999998754332111  111233467889999999876      67789999999999999998 7   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                             ..||.+..     .......+. ....+..+     ...+..+.+++.+||+.||++||++.|+++.|++
T Consensus       222 -------~~p~~~~~-----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         222 -------KQPWYGLS-----NEEVIECIT-QGRLLQRP-----RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -------CCCCCCCC-----HHHHHHHHH-cCCcCCCC-----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence                   66776532     222222222 11111112     2356789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2e-40  Score=321.64  Aligned_cols=233  Identities=25%  Similarity=0.366  Sum_probs=180.3

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHh-ccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|+.  +++.||||++....    ........|+..+.. .+||||+++++++...    ..+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~----~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP----DRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC----CEEEEEEc
Confidence            4699999999999998  57899999886432    111111223333332 4799999999998766    45899999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.+ ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 y~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~--------~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~  148 (320)
T cd05590          77 FVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK--------GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF  148 (320)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence            9999999998864 5799999999999999999999998        999999999999999999999999999865322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~Pf~~~-----~~~~  203 (320)
T cd05590         149 NGK----TTSTFCGTPDYIAPEILQEM------LYGPSVDWWAMGVLLYEMLCG----------HAPFEAE-----NEDD  203 (320)
T ss_pred             CCC----cccccccCccccCHHHHcCC------CCCCccchhhhHHHHHHHhhC----------CCCCCCC-----CHHH
Confidence            111    12345799999999999765      667899999999999999999          6777653     2233


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      +...+..  .....+     ...+.++.+++.+||+.||++||++
T Consensus       204 ~~~~i~~--~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         204 LFEAILN--DEVVYP-----TWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHhc--CCCCCC-----CCCCHHHHHHHHHHcccCHHHCCCC
Confidence            3333321  222222     2255679999999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.4e-40  Score=329.23  Aligned_cols=255  Identities=24%  Similarity=0.434  Sum_probs=195.4

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhcc-CCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLR-HENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~  204 (443)
                      .++|.+.+.||+|+||.||+|.+.       ++.||||++.......  .....|+..+..+. ||||+++++++.... 
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~-  114 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG-  114 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC-
Confidence            467889999999999999999864       3579999986542221  12234555555576 999999999987763 


Q ss_pred             cccEEEeeecccCcccHHHHhccc--------------------------------------------------------
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT--------------------------------------------------------  228 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------  228 (443)
                         .+++||||+++|+|.+++++.                                                        
T Consensus       115 ---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         115 ---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             ---CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence               479999999999999998531                                                        


Q ss_pred             -------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        229 -------------------------------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       229 -------------------------------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                                                                 .+++..++.++.|++.||+|||+.        +++||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHr  263 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK--------NCVHR  263 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CcCcc
Confidence                                                       256777889999999999999988        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||+++++.+||+|||+++.........  ......++..|+|||.+...      .++.++||||||+++|||+
T Consensus       264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvil~e~l  335 (401)
T cd05107         264 DLAARNVLICEGKLVKICDFGLARDIMRDSNYI--SKGSTFLPLKWMAPESIFNN------LYTTLSDVWSFGILLWEIF  335 (401)
T ss_pred             cCCcceEEEeCCCEEEEEecCcceecccccccc--cCCCcCCCCceeChHHhcCC------CCCcHhHHHHHHHHHHHHH
Confidence            999999999999999999999997654322111  11234577899999998765      5678999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      + |          ..||....    ..+.....+. ...++..+     ..++.++.+++.+||+.+|.+||++.+|++.
T Consensus       336 ~~g----------~~P~~~~~----~~~~~~~~~~-~~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         336 TLG----------GTPYPELP----MNEQFYNAIK-RGYRMAKP-----AHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HcC----------CCCCCCCC----chHHHHHHHH-cCCCCCCC-----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            8 6          56665431    2222222222 22223332     2356789999999999999999999999999


Q ss_pred             HHHHh
Q psy14889        425 LIKLA  429 (443)
Q Consensus       425 L~~l~  429 (443)
                      |+++.
T Consensus       396 L~~~~  400 (401)
T cd05107         396 VGDLL  400 (401)
T ss_pred             HHHHh
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.3e-40  Score=320.62  Aligned_cols=236  Identities=23%  Similarity=0.371  Sum_probs=183.1

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccC----cc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|..  +|+.||+|++....    ..  ....|.++... .++||||+++++++.+.    ..+++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~~i~~~~~~~~~~----~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLAL-AWENPFLTHLYCTFQTK----EHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHh-ccCCCCccCeeEEEEeC----CEEEEEE
Confidence            4699999999999998  57899999986532    11  12223333322 25899999999998766    4689999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+.+|+|..++.. ..+++.++..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~  147 (316)
T cd05620          76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK--------GIIYRDLKLDNVMLDRDGHIKIADFGMCKENV  147 (316)
T ss_pred             CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHeEECCCCCEEeCccCCCeecc
Confidence            99999999998865 5789999999999999999999998        99999999999999999999999999986432


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       148 ~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~el~~g----------~~Pf~~~-----~~~  202 (316)
T cd05620         148 FGDN----RASTFCGTPDYIAPEILQGL------KYTFSVDWWSFGVLLYEMLIG----------QSPFHGD-----DED  202 (316)
T ss_pred             cCCC----ceeccCCCcCccCHHHHcCC------CCCcccchhhhHHHHHHHHhC----------CCCCCCC-----CHH
Confidence            1111    12345799999999999876      677899999999999999999          7777653     222


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH-HHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL-RVK  422 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl  422 (443)
                      ...+.+.  ...+..+.     ..+.++.+++.+||+.||++||++. +++
T Consensus       203 ~~~~~~~--~~~~~~~~-----~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         203 ELFESIR--VDTPHYPR-----WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHH--hCCCCCCC-----CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            3333222  12233332     2456799999999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.4e-40  Score=310.02  Aligned_cols=251  Identities=24%  Similarity=0.386  Sum_probs=195.1

Q ss_pred             hccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.+. +..||+|++............|+..+..++||||+++++.+...     ..++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CcEEEE
Confidence            367999999999999999999884 45799998865433333334556666669999999999986433     358999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++|+|.+++.+   ..+++..+..++.|++.||+|||+.        +++||||||+||++++++.+||+|||+++.
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~--------~i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--------NYVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC--------CccccccCcccEEEcCCCcEEeccCCceee
Confidence            99999999999964   3588999999999999999999998        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      +.......   .....++..|+|||...+.      .++.++||||||+++|||+| |          ..||....    
T Consensus       152 ~~~~~~~~---~~~~~~~~~y~~PE~~~~~------~~~~~~DvwslG~~l~ellt~g----------~~p~~~~~----  208 (262)
T cd05071         152 IEDNEYTA---RQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELTTKG----------RVPYPGMV----  208 (262)
T ss_pred             cccccccc---ccCCcccceecCHhHhccC------CCCchhhHHHHHHHHHHHHcCC----------CCCCCCCC----
Confidence            64322111   1223466789999988765      66789999999999999999 5          56665532    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                       .......+.. ......     ...++..+.+++.+||+.||++|||+.++++.|+..
T Consensus       209 -~~~~~~~~~~-~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         209 -NREVLDQVER-GYRMPC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             -hHHHHHHHhc-CCCCCC-----ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence             1222222211 111111     134667899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.9e-40  Score=311.93  Aligned_cols=251  Identities=24%  Similarity=0.448  Sum_probs=199.6

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..+|++.+.||+|+||.||+|.+ .+..+|+|.+..... .....+.|+..+..++|+||+++++++....    ..++|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv   80 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE----PVYII   80 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC----CeEEE
Confidence            35799999999999999999998 578899998865543 2233455666777799999999999987663    47999


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++.+   ..+++..+..++.|++.||.|||+.        +++|+||||+||++++++.+||+|||++.
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~--------~i~h~dl~~~nilv~~~~~~kl~d~g~~~  152 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ--------NSIHRDLAARNILVGEDLVCKVADFGLAR  152 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccCcceEEEcCCceEEEccccchh
Confidence            999999999999964   4589999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........    .....++..|+|||.+...      .++.++||||||+++|||++ |          ..||....   
T Consensus       153 ~~~~~~~~----~~~~~~~~~~~~PE~~~~~------~~~~~~DiwslG~~l~~l~~~g----------~~p~~~~~---  209 (261)
T cd05148         153 LIKEDVYL----SSDKKIPYKWTAPEAASHG------TFSTKSDVWSFGILLYEMFTYG----------QVPYPGMN---  209 (261)
T ss_pred             hcCCcccc----ccCCCCceEecCHHHHccC------CCCchhhHHHHHHHHHHHHcCC----------CCCCCcCC---
Confidence            66432211    1233456789999998765      56689999999999999998 6          66776532   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                        ..+....+. ...++..+     ..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       210 --~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         210 --NHEVYDQIT-AGYRMPCP-----AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             --HHHHHHHHH-hCCcCCCC-----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence              222222222 12222222     34667899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.4e-40  Score=308.58  Aligned_cols=247  Identities=28%  Similarity=0.500  Sum_probs=198.2

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||+|...|+.||+|.+............|+..+..++|+||+++++++.+.    ...++||||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG----NPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC----CCeEEEEEe
Confidence            5789999999999999999999999999999866544233334566666679999999999998764    347999999


Q ss_pred             cCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++++|.+++...   .+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||+++...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~--------~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK--------NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccchhcccceEEEeCCCCEEEcccccccccc
Confidence            9999999999653   589999999999999999999998        99999999999999999999999999997663


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ....       ...++..|+|||.+...      .++.++||||||+++||+++ |          ..||...     ..
T Consensus       154 ~~~~-------~~~~~~~~~ape~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~~~-----~~  205 (256)
T cd05039         154 QGQD-------SGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFG----------RVPYPRI-----PL  205 (256)
T ss_pred             cccc-------cCCCcccccCchhhcCC------cCCcHHHHHHHHHHHHHHHhcC----------CCCCCCC-----CH
Confidence            2211       12345679999998765      56679999999999999997 7          5666543     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..+...+.. ..+...+     ...+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus       206 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         206 KDVVPHVEK-GYRMEAP-----EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHhc-CCCCCCc-----cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            333333221 1222222     33567899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.3e-40  Score=320.95  Aligned_cols=194  Identities=25%  Similarity=0.345  Sum_probs=161.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||++.+  ++..+|+|++......  ......|+..+..++||||+++++++.+.    ..++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~   79 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEIS   79 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC----CEEE
Confidence            47899999999999999999998  5788999987653221  22334566666679999999999998876    4689


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.+ ..+++..+..++.|++.||.|||+..       +|+||||||+|||++.++.+||+|||++.
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-------~ivH~dlkp~Nili~~~~~~kL~Dfg~~~  152 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-------KIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (333)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC-------CEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence            99999999999999865 56889999999999999999999741       79999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      .+....      .....||..|+|||++.+.      .++.++|||||||++|||++|+.|+
T Consensus       153 ~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~~l~~g~~p~  202 (333)
T cd06650         153 QLIDSM------ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMAIGRYPI  202 (333)
T ss_pred             hhhhhc------cccCCCCccccCHHHhcCC------CCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            553321      1234689999999999765      5678999999999999999995543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.6e-40  Score=320.21  Aligned_cols=237  Identities=23%  Similarity=0.368  Sum_probs=183.6

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccC----c--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----E--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|..  +++.||||++....    .  .....|.++... .++||||+++++++.+.    ..+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~hp~iv~~~~~~~~~----~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL-AWEHPFLTHLYCTFQTK----ENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHh-ccCCCcCcceEEEEEeC----CEEEEEE
Confidence            4699999999999998  47889999886532    1  112223333322 26999999999998776    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|.+++.. ..+++.++..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~--------~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  147 (316)
T cd05619          76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK--------GIVYRDLKLDNILLDTDGHIKIADFGMCKENM  147 (316)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeCCCCHHHEEECCCCCEEEccCCcceECC
Confidence            99999999999965 5789999999999999999999998        99999999999999999999999999986432


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       148 ~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~G----------~~pf~~~-----~~~  202 (316)
T cd05619         148 LGDA----KTCTFCGTPDYIAPEILLGQ------KYNTSVDWWSFGVLLYEMLIG----------QSPFHGH-----DEE  202 (316)
T ss_pred             CCCC----ceeeecCCccccCHHHHcCC------CCCchhhhhhHHHHHHHHHhC----------CCCCCCC-----CHH
Confidence            2111    12345789999999999876      667899999999999999999          6777653     223


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH-HHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL-RVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~  423 (443)
                      .....+..  ..+..+.     ..+.++.+++.+||+.||++||++. ++++
T Consensus       203 ~~~~~i~~--~~~~~~~-----~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         203 ELFQSIRM--DNPCYPR-----WLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHHHHh--CCCCCCc-----cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            33333222  2233332     2456789999999999999999997 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3e-40  Score=323.49  Aligned_cols=257  Identities=22%  Similarity=0.400  Sum_probs=194.4

Q ss_pred             ccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCCc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRNS  205 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~  205 (443)
                      ++|++.+.||+|+||.||+|.+       +++.||||++.......  .....|+..+..+ +||||+++++++....  
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~--   84 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG--   84 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC--
Confidence            6899999999999999999974       35789999986533221  1223455555557 7899999999886543  


Q ss_pred             ccEEEeeecccCcccHHHHhcc----------------------------------------------------------
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR----------------------------------------------------------  227 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~----------------------------------------------------------  227 (443)
                       ..++++|||+++|+|.++++.                                                          
T Consensus        85 -~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (343)
T cd05103          85 -GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  163 (343)
T ss_pred             -CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence             246899999999999998853                                                          


Q ss_pred             ----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCc
Q psy14889        228 ----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK  297 (443)
Q Consensus       228 ----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~  297 (443)
                                ..+++.++..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++.........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  235 (343)
T cd05103         164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR--------KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY  235 (343)
T ss_pred             hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCccCeEEEcCCCcEEEEecccccccccCcch
Confidence                      1267788899999999999999998        9999999999999999999999999998765332211


Q ss_pred             CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       298 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                      .  ......++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.....    ......
T Consensus       236 ~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~g----------~~p~~~~~~----~~~~~~  293 (343)
T cd05103         236 V--RKGDARLPLKWMAPETIFDR------VYTIQSDVWSFGVLLWEIFSLG----------ASPYPGVKI----DEEFCR  293 (343)
T ss_pred             h--hcCCCCCCcceECcHHhcCC------CCCchhhHHHHHHHHHHHHHCC----------CCCCCCccc----cHHHHH
Confidence            1  11223456789999998765      66789999999999999997 6          566654311    112222


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      .+ ....++..+.     ..+.++.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus       294 ~~-~~~~~~~~~~-----~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         294 RL-KEGTRMRAPD-----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             HH-hccCCCCCCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            22 1222222222     2345799999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.4e-40  Score=315.21  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=193.6

Q ss_pred             ccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+|.+.+.||+|+||.||+|...       +..||+|++.......  .....|+..+..++||||+++++++....   
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~---   81 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ---   81 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC---
Confidence            46788899999999999999863       3679999886543322  12234555556699999999999987764   


Q ss_pred             cEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                       ..++++||+.+++|.+++..                 ..+++..+..++.|++.||.|||+.        +|+||||||
T Consensus        82 -~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~--------gi~H~dlkp  152 (283)
T cd05091          82 -PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH--------HVVHKDLAT  152 (283)
T ss_pred             -ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc--------Cccccccch
Confidence             36899999999999999841                 2478888999999999999999998        999999999


Q ss_pred             CCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cc
Q psy14889        270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RT  348 (443)
Q Consensus       270 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~  348 (443)
                      +|||+++++.+||+|||+++.........  ......+++.|+|||.+.+.      .++.++||||||+++|||++ | 
T Consensus       153 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~~g-  223 (283)
T cd05091         153 RNVLVFDKLNVKISDLGLFREVYAADYYK--LMGNSLLPIRWMSPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG-  223 (283)
T ss_pred             hheEecCCCceEecccccccccccchhee--eccCccCCccccCHHHHhcC------CCCcchhHHHHHHHHHHHHcCC-
Confidence            99999999999999999987654322111  11233467789999998765      56789999999999999998 5 


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                               ..||.+.     ........+... .....     +..++..+.+++.+||+.+|++||++.+|+..|+.
T Consensus       224 ---------~~p~~~~-----~~~~~~~~i~~~-~~~~~-----~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         224 ---------LQPYCGY-----SNQDVIEMIRNR-QVLPC-----PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             ---------CCCCCCC-----CHHHHHHHHHcC-CcCCC-----CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                     5566543     222333333221 12222     24477889999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.8e-40  Score=313.24  Aligned_cols=267  Identities=25%  Similarity=0.401  Sum_probs=194.5

Q ss_pred             ccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||++.+      ++..||+|.+....... ...+.|+..+..++||||+++++++.....  ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~   81 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--RN   81 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC--Cc
Confidence            5788999999999999999975      37789999886544322 233456666667999999999998765432  34


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++|+||+++|+|.+++.+  ..+++..+..++.|++.||+|||+.        +|+||||||+||++++++.+||+|||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~--------~i~H~dlkp~nili~~~~~~~l~dfg  153 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK--------RYVHRDLATRNILVESENRVKIGDFG  153 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCHhhEEECCCCeEEECCCc
Confidence            7999999999999999964  4589999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........... .....++..|+|||++.+.      .++.++||||||+++|||++|..+.....   ..+.....
T Consensus       154 ~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~~~~~~  223 (284)
T cd05081         154 LTKVLPQDKEYYKV-REPGESPIFWYAPESLTES------KFSVASDVWSFGVVLYELFTYSDKSCSPP---AEFMRMMG  223 (284)
T ss_pred             ccccccCCCcceee-cCCCCCceEeeCHHHhccC------CcChHHHHHHHHHHHHHHhhcCCcCCCcc---hhhhhhcc
Confidence            99876543221111 1112344569999998765      56689999999999999999854321100   00000000


Q ss_pred             CC----CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        367 MD----PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       367 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..    .....+..... .......     ...++.++.+++.+||+.+|++|||+.+|++.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         224 NDKQGQMIVYHLIELLK-NNGRLPA-----PPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cccccccchHHHHHHHh-cCCcCCC-----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            00    01111111111 1111111     233667899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.3e-40  Score=321.34  Aligned_cols=238  Identities=24%  Similarity=0.353  Sum_probs=183.8

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|+.  +++.||||++.....      .....|.++... ..+||||+++++++...    ..+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~-~~~hp~i~~~~~~~~~~----~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILAL-AAKHPFLTALHCCFQTK----DRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHh-ccCCCCccceeeEEEcC----CeEEEEE
Confidence            4699999999999988  478999999865321      112234444333 24899999999998776    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|..++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~  147 (321)
T cd05591          76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH--------GVIYRDLKLDNILLDAEGHCKLADFGMCKEGI  147 (321)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHeEECCCCCEEEeecccceecc
Confidence            99999999988854 5789999999999999999999998        99999999999999999999999999986543


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       148 ~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~tg----------~~Pf~~~-----~~~  202 (321)
T cd05591         148 LNGV----TTTTFCGTPDYIAPEILQEL------EYGPSVDWWALGVLMYEMMAG----------QPPFEAD-----NED  202 (321)
T ss_pred             cCCc----cccccccCccccCHHHHcCC------CCCCccceechhHHHHHHhcC----------CCCCCCC-----CHH
Confidence            2111    12345789999999998765      667899999999999999999          6777653     222


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-------cHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-------SALRVKKT  424 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-------s~~evl~~  424 (443)
                      .....+..  .....|     ...+.++.+++.+||+.||++||       ++.++++.
T Consensus       203 ~~~~~i~~--~~~~~p-----~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         203 DLFESILH--DDVLYP-----VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHHHHc--CCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            33332222  112222     22456799999999999999999       77777643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.8e-40  Score=311.87  Aligned_cols=255  Identities=29%  Similarity=0.421  Sum_probs=193.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|..  +++.||+|++....... ...+.|+..+..++||||+++++++...    ..+++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~----~~~~i   83 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR----EKLWI   83 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----CEEEE
Confidence            36899999999999999999997  67899999886543222 2234566667779999999999998765    45799


Q ss_pred             eecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||+++|+|.+++. +..+++.++..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++..
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~nill~~~~~~~l~dfg~~~~  155 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK--------GKMHRDIKGANILLTDNGDVKLADFGVAAK  155 (267)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEECCCCCEEECcCcccee
Confidence            999999999999885 45789999999999999999999998        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....|+..|+|||.+......   .++.++|||||||++|||++|          +.||....+.   
T Consensus       156 ~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~---~~~~~~Dvws~G~il~el~~g----------~~p~~~~~~~---  215 (267)
T cd06646         156 ITATIAK----RKSFIGTPYWMAPEVAAVEKNG---GYNQLCDIWAVGITAIELAEL----------QPPMFDLHPM---  215 (267)
T ss_pred             ecccccc----cCccccCccccCHhHcccccCC---CCcchhhHHHHHHHHHHHHhC----------CCCccccchh---
Confidence            5432111    1234688999999988532111   456799999999999999999          5565433211   


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       .......   ......+........+..+.+++++||+.||++|||++++++.|
T Consensus       216 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         216 -RALFLMS---KSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             -hhheeee---cCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence             1111110   11111111111223567899999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.5e-40  Score=320.59  Aligned_cols=237  Identities=25%  Similarity=0.336  Sum_probs=184.0

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|.+  +++.||||++.....      .....|.++.... .+||||+++++++.+.    ..+++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~~h~~i~~~~~~~~~~----~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALA-GKHPFLTQLHSCFQTK----DRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhc-cCCCCccceeeEEEcC----CEEEEEE
Confidence            4699999999999988  478999999865321      1122333443331 2799999999998766    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|..++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+|||+++++.+||+|||+++...
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~--------~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  147 (318)
T cd05570          76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER--------GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI  147 (318)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence            99999999998865 4799999999999999999999998        99999999999999999999999999986432


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       148 ~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslGvil~~l~~G----------~~pf~~~-----~~~  202 (318)
T cd05570         148 LGGV----TTSTFCGTPDYIAPEILSYQ------PYGPAVDWWALGVLLYEMLAG----------QSPFEGD-----DED  202 (318)
T ss_pred             cCCC----cccceecCccccCHHHhcCC------CCCcchhhhhHHHHHHHHhhC----------CCCCCCC-----CHH
Confidence            2111    12334689999999999876      667899999999999999999          6777543     222


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH-----HHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA-----LRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~  423 (443)
                      .+...+..  .....+     ...+..+.+++++||+.||++|||+     .++++
T Consensus       203 ~~~~~i~~--~~~~~~-----~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         203 ELFQSILE--DEVRYP-----RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHHHc--CCCCCC-----CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            33232221  222223     2356789999999999999999999     77765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=4.4e-40  Score=311.28  Aligned_cols=257  Identities=28%  Similarity=0.464  Sum_probs=193.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCCc--ccE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRNS--CTQ  208 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~--~~~  208 (443)
                      +.+.|++.+.||+|+||.||+|..  +++.||+|++............|+..+..+ +|+||+++++++......  ...
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            346789999999999999999987  578999998865543333334444444445 799999999998754321  145


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ++++|||+++|+|.+++..   ..+++..+..++.|++.||+|||+.        +|+|+||||+||++++++.+||+||
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~--------~ivh~dl~~~nili~~~~~~~l~Df  155 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH--------KVIHRDIKGQNVLLTENAEVKLVDF  155 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCHHHEEECCCCCEEEccC
Confidence            8999999999999999864   3589999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++.........    .....|+..|+|||++....... ..++.++|||||||++|||++|          ..||.+..
T Consensus       156 g~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~-~~~~~~~Dv~slGv~l~el~~g----------~~p~~~~~  220 (272)
T cd06637         156 GVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPD-ATYDFKSDLWSLGITAIEMAEG----------APPLCDMH  220 (272)
T ss_pred             CCceeccccccc----CCcccccccccCHhHhccccCcC-CCCCchhhHHHHHHHHHHHHhC----------CCCccccC
Confidence            999765432211    23457889999999986432111 1566899999999999999999          56665432


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +    .... ..... .......    ...++..+.+|+.+||+.||.+|||+.++++
T Consensus       221 ~----~~~~-~~~~~-~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         221 P----MRAL-FLIPR-NPAPRLK----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             H----HHHH-HHHhc-CCCCCCC----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            1    1111 11111 1111111    1235678999999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=6.4e-40  Score=308.32  Aligned_cols=250  Identities=24%  Similarity=0.395  Sum_probs=195.0

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.. .+..||+|.+............|+..+..++|+||+++++++...     ..+++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~   79 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEE-----PIYIVT   79 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCC-----CcEEEE
Confidence            36799999999999999999987 567899998865443333344566666669999999999987432     358999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++++|.+++..   ..+++.+++.++.|++.||.|||+.        +++||||||+||++++++.+||+|||++..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~--------~i~H~di~p~Nili~~~~~~~l~dfg~~~~  151 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM--------NYIHRDLRSANILVGDGLVCKIADFGLARL  151 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCccceEEEeCCceEEeCCceeeee
Confidence            99999999999864   3589999999999999999999998        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      +.......   .....++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.+..    
T Consensus       152 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~~~g----------~~p~~~~~----  208 (260)
T cd05070         152 IEDNEYTA---RQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELVTKG----------RVPYPGMN----  208 (260)
T ss_pred             ccCccccc---ccCCCCCccccChHHHhcC------CCcchhhhHHHHHHHHHHHhcC----------CCCCCCCC----
Confidence            54322111   1222456789999988765      66789999999999999999 6          56775531    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                       ..+....+.. ...+..+     ...+..+.+++.+||+.||++|||+.++.+.|++
T Consensus       209 -~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         209 -NREVLEQVER-GYRMPCP-----QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             -HHHHHHHHHc-CCCCCCC-----CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             2222222221 1222222     3356789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4e-40  Score=320.10  Aligned_cols=238  Identities=23%  Similarity=0.323  Sum_probs=182.7

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCC-CceeeeeeccccCCcccEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHE-NILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~-nIv~l~g~~~~~~~~~~~~  209 (443)
                      +|++.+.||+|+||.||+|+.  +++.||||++....    ........|+..+..++|+ +|+++++++...    ..+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----DRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC----CEE
Confidence            478899999999999999988  46789999886432    1111222344444446665 578888887665    358


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~dlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK--------GIIYRDLKLDNVMLDAEGHIKIADFGMC  148 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence            999999999999998864 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......    ......||+.|+|||++.+.      .++.++|||||||++|||+||          ..||...    
T Consensus       149 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~elltG----------~~pf~~~----  204 (324)
T cd05587         149 KENIFGGK----TTRTFCGTPDYIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAG----------QPPFDGE----  204 (324)
T ss_pred             eecCCCCC----ceeeecCCccccChhhhcCC------CCCcccchhhhHHHHHHHHhC----------CCCCCCC----
Confidence            64321111    12334689999999999876      667899999999999999999          6777643    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                       ........+.  .....++     ...+.++.+++.+||+.||.+|++.
T Consensus       205 -~~~~~~~~i~--~~~~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         205 -DEDELFQSIM--EHNVSYP-----KSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             -CHHHHHHHHH--cCCCCCC-----CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence             2222222222  1223333     2355679999999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.7e-40  Score=328.56  Aligned_cols=262  Identities=20%  Similarity=0.211  Sum_probs=185.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..+|++.+.||+|+||.||++..  +++.||+|....   ....  .|+..+..++||||+++++++...    ...++|
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~--~E~~il~~l~HpnIv~~~~~~~~~----~~~~lv  161 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTA--TEAHILRAINHPSIIQLKGTFTYN----KFTCLI  161 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhH--HHHHHHHhCCCCCCCCEeEEEEEC----CeeEEE
Confidence            36799999999999999999988  588999996532   2233  445555569999999999998765    357899


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      +|++. ++|..++.. ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+|+..
T Consensus       162 ~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~--------~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        162 LPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN--------RIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            99986 689888854 5799999999999999999999998        9999999999999999999999999999654


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc---------------
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE---------------  356 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~---------------  356 (443)
                      ......   ......||+.|+|||++.+.      .++.++|||||||++|||++|+.++.....               
T Consensus       233 ~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~  303 (391)
T PHA03212        233 VDINAN---KYYGWAGTIATNAPELLARD------PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII  303 (391)
T ss_pred             cccccc---ccccccCccCCCChhhhcCC------CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence            322111   12345799999999999775      677899999999999999999543210000               


Q ss_pred             ---cCCCCCCCCCCCCChHHHH-hhhhhcCCCCCCCCCCC-CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        357 ---YKAPYHDLVPMDPSFDDMR-KVICIDQQRPVLPNRWV-SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       357 ---~~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         +..|............... .........+.....|. ....+.++.+|+.+||+.||++|||+.|+++
T Consensus       304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence               0000000000000000000 00000001111110110 0124567999999999999999999999985

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.2e-40  Score=322.54  Aligned_cols=238  Identities=23%  Similarity=0.306  Sum_probs=179.6

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHh-ccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||++..  +++.||+|++......    ......|+..+.. .+||||+++++++...    ..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~----~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----SRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC----CEEEEEEe
Confidence            4699999999999987  5789999998653211    1112233333333 4899999999998776    45899999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|..++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~  148 (329)
T cd05618          77 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  148 (329)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence            9999999988854 5799999999999999999999998        999999999999999999999999999865322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC----CC
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM----DP  369 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~----~~  369 (443)
                      ...    ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||......    ..
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~Pf~~~~~~~~~~~~  208 (329)
T cd05618         149 PGD----TTSTFCGTPNYIAPEILRGE------DYGFSVDWWALGVLMFEMMAG----------RSPFDIVGSSDNPDQN  208 (329)
T ss_pred             CCC----ccccccCCccccCHHHHcCC------CCCCccceecccHHHHHHhhC----------CCCCccCCCcCCcccc
Confidence            111    12345799999999999876      667899999999999999999          5555321111    11


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      ....+.+.+.  .....+|     ...+..+.+++.+||+.||++||++
T Consensus       209 ~~~~~~~~i~--~~~~~~p-----~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         209 TEDYLFQVIL--EKQIRIP-----RSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             cHHHHHHHHh--cCCCCCC-----CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            1122222222  1222333     2355679999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.4e-40  Score=308.16  Aligned_cols=248  Identities=23%  Similarity=0.424  Sum_probs=191.7

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .+|++.+.||+|+||.||+|.+ .+..+|+|.+............|+..+..++||||+++++++....    ..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR----PIFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----ceEEEEe
Confidence            4688899999999999999988 4568999987644332222334555556699999999999987653    4799999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++++|.+++..  ..+++..+..++.|++.||+|||+.        +++||||||+||++++++.+||+|||+++...
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN--------GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccccHhhEEECCCCcEEECCcccceecc
Confidence            9999999999864  4689999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....   ......++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||....     .
T Consensus       152 ~~~~~---~~~~~~~~~~y~~Pe~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~~~~-----~  207 (256)
T cd05059         152 DDQYT---SSQGTKFPVKWAPPEVFDYS------RFSSKSDVWSFGVLMWEVFSEG----------KMPYERFS-----N  207 (256)
T ss_pred             ccccc---ccCCCCCCccccCHHHhccC------CCCchhhHHHHHHHHHHHhccC----------CCCCCCCC-----H
Confidence            32111   11122345679999998876      66789999999999999999 5          56665431     1


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      ......+. ...+...+     ..++.++.+++.+||+.+|++|||+.++++.|
T Consensus       208 ~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         208 SEVVESVS-AGYRLYRP-----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHH-cCCcCCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            22222221 12222222     23667899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.2e-40  Score=325.44  Aligned_cols=255  Identities=19%  Similarity=0.242  Sum_probs=194.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|++.+.||+|+||.||++..  +++.||+|++.....    .......|+..+..++||||+++++.+.+.    ..
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----~~  117 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD----RY  117 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC----CE
Confidence            37899999999999999999998  578999998854221    111123344455558999999999998765    46


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +++||||+++|+|.++++...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDLkp~NIll~~~~~ikL~DfG~a  189 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM--------GFIHRDVKPDNMLLDKSGHLKLADFGTC  189 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence            89999999999999999888899999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+......   ......||+.|+|||++.......  .++.++|||||||++|||++|          ..||...    
T Consensus       190 ~~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~--~~~~~~DiwSlGvilyell~G----------~~Pf~~~----  250 (371)
T cd05622         190 MKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDG--YYGRECDWWSVGVFLYEMLVG----------DTPFYAD----  250 (371)
T ss_pred             eEcCcCCcc---cccCcccCccccCHHHHhccCCCc--cCCCccceeehhHHHHHHHhC----------CCCCCCC----
Confidence            766432211   123457999999999987542211  366899999999999999999          7777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                       ........+........++.   ....+..+.+++..|+..++.+  |+++.++++.
T Consensus       251 -~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         251 -SLVGTYSKIMNHKNSLTFPD---DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             -CHHHHHHHHHcCCCcccCCC---cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence             12222222222222222332   1236678999999999844433  7789988874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.4e-40  Score=323.04  Aligned_cols=234  Identities=26%  Similarity=0.347  Sum_probs=180.6

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHH-HHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||+||+|..  +|+.||+|++.......    .....|.. .+..++||||+++++.+...    ..+++|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~----~~~~lv~e   76 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA----DKLYFVLD   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC----CEEEEEEc
Confidence            4699999999999998  68999999986432111    11112222 23458999999999988765    45799999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|..++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~  148 (323)
T cd05575          77 YVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL--------NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE  148 (323)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence            9999999998864 5689999999999999999999998        999999999999999999999999999865322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~ell~g----------~~pf~~~-----~~~~  203 (323)
T cd05575         149 HSK----TTSTFCGTPEYLAPEVLRKQ------PYDRTVDWWCLGAVLYEMLYG----------LPPFYSR-----DTAE  203 (323)
T ss_pred             CCC----ccccccCChhhcChhhhcCC------CCCccccccccchhhhhhhcC----------CCCCCCC-----CHHH
Confidence            111    12345799999999999776      667899999999999999999          6777653     2223


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +...+..  ....++     ...+..+.+++.+||+.||++||++.
T Consensus       204 ~~~~i~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         204 MYDNILN--KPLRLK-----PNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHc--CCCCCC-----CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            2222211  111222     22467799999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=328.44  Aligned_cols=252  Identities=22%  Similarity=0.289  Sum_probs=189.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +++.||||++.....    .....+.|+..+..++||||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~----~~~   76 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA----QYL   76 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----Cee
Confidence            3688999999999999999987  688999998854321    111223455555669999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--------givHrDlkp~NIll~~~~~~kl~DfGla  148 (377)
T cd05629          77 YLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL--------GFIHRDIKPDNILIDRGGHIKLSDFGLS  148 (377)
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHEEECCCCCEEEeecccc
Confidence            999999999999999864 5689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCc-----------CC--------------------------------CCCCCcccccCcccccccccccccCc
Q psy14889        289 VSYSQLSNK-----------MD--------------------------------IPPNPRVGTKRYMSPEILDESINMDC  325 (443)
Q Consensus       289 ~~~~~~~~~-----------~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~  325 (443)
                      +.+......           ..                                ......+||+.|+|||++.+.     
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----  223 (377)
T cd05629         149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-----  223 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-----
Confidence            643211000           00                                000124699999999999766     


Q ss_pred             CCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHH
Q psy14889        326 FESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK  405 (443)
Q Consensus       326 ~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  405 (443)
                       .++.++|||||||++|||++|          ..||....    ..+....... ......+|..   ...+.++.+++.
T Consensus       224 -~~~~~~DiwSlGvil~elltG----------~~Pf~~~~----~~~~~~~i~~-~~~~~~~p~~---~~~s~~~~dli~  284 (377)
T cd05629         224 -GYGQECDWWSLGAIMFECLIG----------WPPFCSEN----SHETYRKIIN-WRETLYFPDD---IHLSVEAEDLIR  284 (377)
T ss_pred             -CCCCceeeEecchhhhhhhcC----------CCCCCCCC----HHHHHHHHHc-cCCccCCCCC---CCCCHHHHHHHH
Confidence             677899999999999999999          67775532    1122222221 1122223321   124567999999


Q ss_pred             HHhcCCcCCC---CcHHHHHHH
Q psy14889        406 ECWHQNANVR---LSALRVKKT  424 (443)
Q Consensus       406 ~cl~~dP~~R---ps~~evl~~  424 (443)
                      +|+. +|.+|   +|+.|+++.
T Consensus       285 ~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         285 RLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             HHhc-CHhhcCCCCCHHHHhcC
Confidence            9997 77776   599998874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.2e-40  Score=314.05  Aligned_cols=240  Identities=24%  Similarity=0.313  Sum_probs=183.9

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||+||++..  +++.||+|.+.......    .....|+..+..++|+||+++.+++...    ..+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK----TDLCLVMTIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC----CeEEEEEeCCC
Confidence            69999999999987  58899999886432211    1223455566669999999999988765    45799999999


Q ss_pred             cccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        218 FGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       218 ~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +|+|.+++.     ...+++..+..++.||+.||.|||+.        +|+||||||+||+++.++.+||+|||++..+.
T Consensus        77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  148 (280)
T cd05608          77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR--------RIIYRDLKPENVLLDNDGNVRISDLGLAVELK  148 (280)
T ss_pred             CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence            999998773     24689999999999999999999998        99999999999999999999999999997654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||....... ...
T Consensus       149 ~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g----------~~pf~~~~~~~-~~~  207 (280)
T cd05608         149 DGQSK----TKGYAGTPGFMAPELLQGE------EYDFSVDYFALGVTLYEMIAA----------RGPFRARGEKV-ENK  207 (280)
T ss_pred             CCCcc----ccccCCCcCccCHHHhcCC------CCCccccHHHHHHHHHHHHhC----------CCCCCCCCcch-hHH
Confidence            32211    2334789999999999876      667899999999999999999          66775432111 111


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .....+.  ......     +...+..+.+++.+||+.||++||     +++++++
T Consensus       208 ~~~~~~~--~~~~~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         208 ELKQRIL--NDSVTY-----PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHhhc--ccCCCC-----cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            1111111  111111     233667899999999999999999     6777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.6e-40  Score=320.26  Aligned_cols=238  Identities=23%  Similarity=0.310  Sum_probs=184.0

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +|.+.+.||+|+||.||+|+.  +++.||+|++......    ......|...+..+ +|++|+++++++.+.    ..+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----DRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC----CEE
Confidence            478899999999999999988  4679999988653211    11112233333223 689999999988765    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++.++..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~Nill~~~~~~kL~DfG~~  148 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK--------GIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEecCCCHHHeEECCCCcEEEccCCCc
Confidence            999999999999998864 6799999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......    ......||+.|+|||++.+.      .++.++|||||||++|||+||          ..||...    
T Consensus       149 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltg----------~~Pf~~~----  204 (323)
T cd05616         149 KENMWDGV----TTKTFCGTPDYIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAG----------QAPFEGE----  204 (323)
T ss_pred             eecCCCCC----ccccCCCChhhcCHHHhcCC------CCCCccchhchhHHHHHHHhC----------CCCCCCC----
Confidence            65432111    12345799999999999876      677899999999999999999          6777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                       ....+...+..  ....+|     ...+.++.+++.+||+.||++|++.
T Consensus       205 -~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         205 -DEDELFQSIME--HNVAYP-----KSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             -CHHHHHHHHHh--CCCCCC-----CcCCHHHHHHHHHHcccCHHhcCCC
Confidence             22233332221  222233     2356789999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.7e-40  Score=320.90  Aligned_cols=243  Identities=23%  Similarity=0.294  Sum_probs=182.5

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||++..  +++.||+|++......    ......|+..+..+ +||||+++++++.+.    ..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~----~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE----SRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC----CEEEEEEe
Confidence            4699999999999988  5889999998653211    11122334443335 799999999998766    45899999


Q ss_pred             ccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++. ...+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  148 (329)
T cd05588          77 FVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER--------GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR  148 (329)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence            999999998885 46799999999999999999999998        999999999999999999999999999864321


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC----CCC
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP----MDP  369 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~----~~~  369 (443)
                      ...    ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||.....    ...
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~~l~el~~g----------~~Pf~~~~~~~~~~~~  208 (329)
T cd05588         149 PGD----TTSTFCGTPNYIAPEILRGE------DYGFSVDWWALGVLMFEMMAG----------RSPFDIVGMSDNPDQN  208 (329)
T ss_pred             CCC----ccccccCCccccCHHHHcCC------CCCCccceechHHHHHHHHHC----------CCCccccccccccccc
Confidence            111    12345799999999999876      667899999999999999999          445532111    011


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc------HHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS------ALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps------~~evl~  423 (443)
                      ..+...+.+.  .....+|     ...+.++.+++++||+.||.+|||      +.++++
T Consensus       209 ~~~~~~~~~~--~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         209 TEDYLFQVIL--EKQIRIP-----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             chHHHHHHHH--cCCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            1122222222  1222333     235567999999999999999997      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=5.8e-40  Score=313.78  Aligned_cols=254  Identities=22%  Similarity=0.385  Sum_probs=195.1

Q ss_pred             cccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +|++.+.||+|+||.||+|...       ...+|+|.+......  ......|+..+..++||||+++++.+....    
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----   76 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG----   76 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence            4778899999999999999863       246888877543322  122345666666799999999999987663    


Q ss_pred             EEEeeecccCcccHHHHhcc-------------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-------------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAI  262 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~i  262 (443)
                      ..++++||+.+|+|.+++..                         ..+++..++.++.|++.||.|||+.        +|
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~i  148 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM--------KL  148 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC--------Ce
Confidence            36899999999999998753                         2478899999999999999999988        99


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHH
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW  342 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~  342 (443)
                      +||||||+|||+++++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++||||||+++|
T Consensus       149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~------~~~~~~Di~slG~~l~  220 (290)
T cd05045         149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV--KRSKGRIPVKWMAIESLFDH------IYTTQSDVWSFGVLLW  220 (290)
T ss_pred             ehhhhhhheEEEcCCCcEEeccccccccccCccchh--cccCCCCCccccCHHHHccC------CcchHhHHHHHHHHHH
Confidence            999999999999999999999999997654322111  11223456789999988765      5678999999999999


Q ss_pred             HHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        343 EVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       343 ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      ||++ |          ..||...     ....+.+.... ......+     ..++..+.+++.+||+.||++||++.++
T Consensus       221 el~t~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~i~~cl~~~P~~Rp~~~~i  279 (290)
T cd05045         221 EIVTLG----------GNPYPGI-----APERLFNLLKT-GYRMERP-----ENCSEEMYNLMLTCWKQEPDKRPTFADI  279 (290)
T ss_pred             HHHhcC----------CCCCCCC-----CHHHHHHHHhC-CCCCCCC-----CCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            9998 7          6676543     22333333321 1222222     3356789999999999999999999999


Q ss_pred             HHHHHHHhhc
Q psy14889        422 KKTLIKLACA  431 (443)
Q Consensus       422 l~~L~~l~~~  431 (443)
                      ++.|+++...
T Consensus       280 ~~~l~~~~~~  289 (290)
T cd05045         280 SKELEKMMVK  289 (290)
T ss_pred             HHHHHHHHhc
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6.9e-40  Score=308.11  Aligned_cols=251  Identities=22%  Similarity=0.397  Sum_probs=197.4

Q ss_pred             hhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..++|++.++||+|+||.||+|.. +++.||+|.+..........+.|+..+..++|+||+++++++...     ..+++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v   78 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQE-----PIYII   78 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccC-----CcEEE
Confidence            457899999999999999999987 678999998875544333445566666679999999999986432     36999


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++..   ..+++.++..++.|++.||+|||+.        +++||||||+||++++++.++|+|||++.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK--------NYIHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CeecccccHHhEEEcCCCCEEEccCccee
Confidence            999999999999854   4689999999999999999999988        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........   ......++..|+|||++...      .++.++||||||+++||+++ |          ..||....   
T Consensus       151 ~~~~~~~~---~~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~el~~~g----------~~p~~~~~---  208 (260)
T cd05067         151 LIEDNEYT---AREGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTYG----------RIPYPGMT---  208 (260)
T ss_pred             ecCCCCcc---cccCCcccccccCHHHhccC------CcCcccchHHHHHHHHHHHhCC----------CCCCCCCC---
Confidence            65532211   11223456789999998765      56689999999999999999 7          66776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                        .......... ..+...+     ...+.++.+++.+||+.||++|||++++++.|+.
T Consensus       209 --~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         209 --NPEVIQNLER-GYRMPRP-----DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             --hHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence              1222222221 2222222     2356789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.8e-40  Score=306.51  Aligned_cols=247  Identities=21%  Similarity=0.367  Sum_probs=190.6

Q ss_pred             ceeeeecCeEEEEEEEC--C---ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH--G---ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|.+.  +   ..+|+|.+......  ......|+..+..+.||||+++++++...     ..++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEEEE
Confidence            46999999999999872  2   67999988654432  22234566666679999999999987533     3689999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.+ ..+++..+..++.|++.||+|||+.        +++|+||||+|||++.++.+||+|||+++....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~--------~i~H~di~p~nili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060          76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK--------HFVHRDLAARNVLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc--------CeeccCcccceEEEcCCCcEEeccccccceeec
Confidence            9999999999965 4599999999999999999999998        999999999999999999999999999976654


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ...... ......++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     ...
T Consensus       148 ~~~~~~-~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~~~~~g----------~~p~~~~-----~~~  205 (257)
T cd05060         148 GSDYYR-ATTAGRWPLKWYAPECINYG------KFSSKSDVWSYGVTLWEAFSYG----------AKPYGEM-----KGA  205 (257)
T ss_pred             CCcccc-cccCccccccccCHHHhcCC------CCCccchHHHHHHHHHHHHcCC----------CCCcccC-----CHH
Confidence            322211 11122345689999998765      66789999999999999998 7          6677543     122


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      .+...+.. ......+     ..++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       206 ~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         206 EVIAMLES-GERLPRP-----EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            33333322 1222222     335678999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.4e-40  Score=335.64  Aligned_cols=259  Identities=19%  Similarity=0.277  Sum_probs=189.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeecccc----CCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTS----RNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~----~~~~~~  208 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++.....   ....|+..+..++||||+++++++...    ......
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            46799999999999999999987  578999998754321   223456666669999999998876432    122235


Q ss_pred             EEeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEE
Q psy14889        209 LWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVI  282 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl  282 (443)
                      +++||||+++ +|.+++.     ...+++..+..++.||+.||+|||+.        +|+||||||+|||++.++ .+||
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~--------~IiHrDLKp~NILl~~~~~~vkL  212 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK--------FICHRDLKPQNLLIDPNTHTLKL  212 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCcCHHHEEEcCCCCceee
Confidence            7899999985 7777663     35689999999999999999999998        999999999999998665 7999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+|+.+.....     .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.
T Consensus       213 ~DFGla~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlGvil~elltG----------~~pf~  272 (440)
T PTZ00036        213 CDFGSAKNLLAGQR-----SVSYICSRFYRAPELMLGAT-----NYTTHIDLWSLGCIIAEMILG----------YPIFS  272 (440)
T ss_pred             eccccchhccCCCC-----cccCCCCcCccCHHHhcCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCC
Confidence            99999986643221     12346899999999986542     466899999999999999999          55665


Q ss_pred             CCCCCCCChHHHHhhhhhcC--------------CCCCCCCC-------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQ--------------QRPVLPNR-------WVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      +...    .+.+...+....              ....++..       ..+...+.++.+|+.+||..||.+|||+.|+
T Consensus       273 ~~~~----~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~  348 (440)
T PTZ00036        273 GQSS----VDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA  348 (440)
T ss_pred             CCCh----HHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            4321    111111111000              00001100       0112345789999999999999999999999


Q ss_pred             HH--HHHHHh
Q psy14889        422 KK--TLIKLA  429 (443)
Q Consensus       422 l~--~L~~l~  429 (443)
                      ++  .+..+.
T Consensus       349 l~hp~f~~~~  358 (440)
T PTZ00036        349 LADPFFDDLR  358 (440)
T ss_pred             hCChhHHhhh
Confidence            84  344443

>KOG0599|consensus

Probab=100.00  E-value=3.4e-41  Score=298.57  Aligned_cols=260  Identities=23%  Similarity=0.335  Sum_probs=207.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------c-----chHHHHHHHHHHhccCCCceeeeeeccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------A-----SWSRETEIYSTVLLRHENILGYIGSDMT  201 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~-----~~~~e~ei~~~~~l~H~nIv~l~g~~~~  201 (443)
                      -+.|...+.||.|..++|.++.+  +|..+|+|++.....      .     ....|.+|+... ..||||+.+.+++.+
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv-~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQV-MGHPYIIDLQDVYES   94 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHh-cCCCcEEEeeeeccC
Confidence            35788889999999999999877  688999998743211      1     112234444443 589999999999987


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                      +    ..+++|+|.|+.|.|.++|.. -.+++....+|++|+..|+.|||..        +||||||||+|||+|++.++
T Consensus        95 ~----sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~--------~IVHRDLKpENILlddn~~i  162 (411)
T KOG0599|consen   95 D----AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR--------NIVHRDLKPENILLDDNMNI  162 (411)
T ss_pred             c----chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh--------hhhhcccChhheeeccccce
Confidence            7    568999999999999999965 5799999999999999999999999        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||+|..+......     ...+||++|.|||.+..+.+.+...|+...|+||.||+||-|+.|          ..|
T Consensus       163 ~isDFGFa~~l~~GekL-----relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG----------cpP  227 (411)
T KOG0599|consen  163 KISDFGFACQLEPGEKL-----RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG----------CPP  227 (411)
T ss_pred             EEeccceeeccCCchhH-----HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC----------CCc
Confidence            99999999888765433     345899999999999988887777899999999999999999999          667


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--HHHHHhh
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK--TLIKLAC  430 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~l~~  430 (443)
                      |+..     ..-.+...+......-..| .|  ++.+...++||.+||+.||.+|.|++|++.  .+..++.
T Consensus       228 FwHR-----kQmlMLR~ImeGkyqF~sp-eW--adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  228 FWHR-----KQMLMLRMIMEGKYQFRSP-EW--ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             hhHH-----HHHHHHHHHHhcccccCCc-ch--hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence            7653     1223334443333322222 34  346788999999999999999999999886  3444443

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7.9e-40  Score=311.11  Aligned_cols=256  Identities=21%  Similarity=0.339  Sum_probs=198.7

Q ss_pred             ccccccceeeeecCeEEEEEEEC------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+.      +..|++|++......  ......|+..+..++||||+++++++....   .
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~   82 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG---E   82 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---C
Confidence            68999999999999999999973      478999987643222  222345666666799999999999876643   2


Q ss_pred             EEEeeecccCcccHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG  278 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~  278 (443)
                      ..++++||+++|+|.+++..         ..+++.++..++.|++.||+|||+.        +++||||||+||++++++
T Consensus        83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~i~H~di~p~nil~~~~~  154 (280)
T cd05043          83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR--------GVIHKDIAARNCVIDEEL  154 (280)
T ss_pred             CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccCHhhEEEcCCC
Confidence            46899999999999999854         3588999999999999999999988        999999999999999999


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCccccc
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEY  357 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~  357 (443)
                      .+||+|||+++.+.......  ......++..|+|||++.+.      .++.++||||||+++||+++ |          
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~------~~~~~~Di~slG~~l~el~~~g----------  216 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHC--LGDNENRPVKWMALESLVNK------EYSSASDVWSFGVLLWELMTLG----------  216 (280)
T ss_pred             cEEECCCCCcccccCCceEE--eCCCCCcchhccCHHHHhcC------CCCchhhHHHhHHHHHHHhcCC----------
Confidence            99999999997654322111  11223466789999998765      56789999999999999999 7          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ..||....     ...+...+.. ......+     ..++..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus       217 ~~p~~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         217 QTPYVEID-----PFEMAAYLKD-GYRLAQP-----INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CCCcCcCC-----HHHHHHHHHc-CCCCCCC-----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            66776532     1223332221 2222211     23567899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-39  Score=308.13  Aligned_cols=254  Identities=20%  Similarity=0.351  Sum_probs=193.1

Q ss_pred             ccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCC--ccc
Q psy14889        138 ISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~  207 (443)
                      |.+.+.||+|+||.||+|...     +..||+|++.......   .....|+..+..++||||+++++++.....  ...
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            567889999999999999872     3679999886532221   122345556666999999999998765432  123


Q ss_pred             EEEeeecccCcccHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                      ..++++||+++|+|..++..       ..+++..+..++.|++.||.|||+.        +++||||||+||++++++.+
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~--------~i~H~dlkp~Nil~~~~~~~  152 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR--------NFIHRDLAARNCMLREDMTV  152 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC--------CeeccccchheEEECCCCeE
Confidence            47899999999999998832       3589999999999999999999998        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKA  359 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~  359 (443)
                      ||+|||+++.........  ......++..|+|||.+.+.      .++.++||||||+++|||++ |          ..
T Consensus       153 kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~SlG~il~el~~~g----------~~  214 (273)
T cd05035         153 CVADFGLSKKIYSGDYYR--QGRIAKMPVKWIAIESLADR------VYTSKSDVWAFGVTMWEIATRG----------QT  214 (273)
T ss_pred             EECCccceeecccccccc--ccccccCCccccCHhhcccC------CCCcccchHHHHHHHHHHHhCC----------CC
Confidence            999999997664332211  11222356789999998765      56789999999999999999 6          56


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ||.+..     .......+.. ...+..+     ..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus       215 p~~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         215 PYPGVE-----NHEIYDYLRH-GNRLKQP-----EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCCCC-----HHHHHHHHHc-CCCCCCC-----cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            765532     1222222221 2222222     33667899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3.3e-40  Score=327.97  Aligned_cols=250  Identities=21%  Similarity=0.276  Sum_probs=188.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .|++.+.||+|+||.||+|+.  +++.||+|++.....    .......|+..+..++||||+++++.+.+.    ..++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~----~~~~   77 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK----DNLY   77 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC----CEEE
Confidence            588899999999999999987  578999998865321    111223455555669999999999998876    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++.
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~--------~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          78 FVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM--------GFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            99999999999999865 5688999999999999999999998        99999999999999999999999999975


Q ss_pred             cccccCC-------------------------------------------cCCCCCCCcccccCcccccccccccccCcC
Q psy14889        290 SYSQLSN-------------------------------------------KMDIPPNPRVGTKRYMSPEILDESINMDCF  326 (443)
Q Consensus       290 ~~~~~~~-------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  326 (443)
                      .+.....                                           ..........||+.|+|||++.+.      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------  223 (382)
T cd05625         150 GFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT------  223 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC------
Confidence            4321000                                           000001234799999999999866      


Q ss_pred             CCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHH
Q psy14889        327 ESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE  406 (443)
Q Consensus       327 ~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  406 (443)
                      .++.++|||||||++|||++|          ..||....    ..+...+... .......|.   ....+.++.+++.+
T Consensus       224 ~~~~~~DiwSlGvil~elltG----------~~Pf~~~~----~~~~~~~i~~-~~~~~~~p~---~~~~s~~~~~li~~  285 (382)
T cd05625         224 GYTQLCDWWSVGVILYEMLVG----------QPPFLAQT----PLETQMKVIN-WQTSLHIPP---QAKLSPEASDLIIK  285 (382)
T ss_pred             CCCCeeeEEechHHHHHHHhC----------CCCCCCCC----HHHHHHHHHc-cCCCcCCCC---cccCCHHHHHHHHH
Confidence            677899999999999999999          67776531    1122222221 112222222   12345678888888


Q ss_pred             HhcCCcCCCCc---HHHHHH
Q psy14889        407 CWHQNANVRLS---ALRVKK  423 (443)
Q Consensus       407 cl~~dP~~Rps---~~evl~  423 (443)
                      ++ .||++|++   +.++++
T Consensus       286 l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         286 LC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             Hc-cCHhHcCCCCCHHHHhc
Confidence            76 59999997   887765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=6e-40  Score=309.52  Aligned_cols=254  Identities=25%  Similarity=0.394  Sum_probs=198.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +++.+|||.+......    ......|+..+..++||||+++++++...    ...
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~   77 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----NEL   77 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC----CeE
Confidence            4688899999999999999996  6899999987543211    11223466666669999999999998766    357


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      +++|||+++++|.+++..     ..+++..+..++.||+.||.|||+.        +++|+||||+||+++.++.++|+|
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~dl~p~nili~~~~~~~l~d  149 (267)
T cd08229          78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR--------RVMHRDIKPANVFITATGVVKLGD  149 (267)
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCCEEECc
Confidence            999999999999998852     4589999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.........    .....|+..|+|||.+.+.      .++.++|+||||+++|||++|          ..||...
T Consensus       150 fg~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~  209 (267)
T cd08229         150 LGLGRFFSSKTTA----AHSLVGTPYYMSPERIHEN------GYNFKSDIWSLGCLLYEMAAL----------QSPFYGD  209 (267)
T ss_pred             chhhhccccCCcc----cccccCCcCccCHHHhcCC------CccchhhHHHHHHHHHHHHhC----------CCCcccc
Confidence            9998765432211    1234688899999998765      566899999999999999999          6676542


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ..   ......+.+. ....+..+    ....+..+.+++.+||+.||++|||+.+|++.+.+++
T Consensus       210 ~~---~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         210 KM---NLYSLCKKIE-QCDYPPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             cc---hHHHHhhhhh-cCCCCCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            11   1122222221 11122222    1336678999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=9.9e-40  Score=306.56  Aligned_cols=245  Identities=22%  Similarity=0.373  Sum_probs=188.8

Q ss_pred             eeeeecCeEEEEEEE----CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        143 CIGKGRYGEVWRGVW----HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      .||+|+||.||+|.+    ++..+|+|++.......   .....|+..+..++||||+++++++...     ..++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEEEec
Confidence            589999999999976    46789999876443221   1223455566669999999999987533     35899999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+||+|||+++.....
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          77 AELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET--------NFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence            999999999964 5689999999999999999999988        9999999999999999999999999999766433


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ..... ......++..|+|||.+...      .++.++||||||+++|||++ |          ..||....     ...
T Consensus       149 ~~~~~-~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~t~g----------~~p~~~~~-----~~~  206 (257)
T cd05116         149 ENYYK-AKTHGKWPVKWYAPECMNYY------KFSSKSDVWSFGVLMWEAFSYG----------QKPYKGMK-----GNE  206 (257)
T ss_pred             CCeee-ecCCCCCCccccCHhHhccC------CcCchhHHHHHHHHHHHHHhCC----------CCCCCCCC-----HHH
Confidence            22111 11222346789999998765      56679999999999999998 7          66776531     223


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ....+.. ...+..+     ..++.++.++|.+||+.||++||++.+|.+.|++.
T Consensus       207 ~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         207 VTQMIES-GERMECP-----QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            3333322 2233333     23667899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.1e-40  Score=322.22  Aligned_cols=237  Identities=25%  Similarity=0.331  Sum_probs=181.5

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHH-HHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEI-YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei-~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|+.  +++.||+|++.......    .....|. ..+..++||||+++++++...    ..+++|||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~----~~~~lv~e   76 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----DKLYFVLD   76 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC----CeEEEEEe
Confidence            4699999999999998  57789999986532111    1111222 223448999999999998766    45799999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~  148 (325)
T cd05602          77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL--------NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  148 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence            9999999999865 5688999999999999999999998        999999999999999999999999999875432


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~pf~~~-----~~~~  203 (325)
T cd05602         149 HNG----TTSTFCGTPEYLAPEVLHKQ------PYDRTVDWWCLGAVLYEMLYG----------LPPFYSR-----NTAE  203 (325)
T ss_pred             CCC----CcccccCCccccCHHHHcCC------CCCCccccccccHHHHHHhcC----------CCCCCCC-----CHHH
Confidence            111    12345799999999999876      667899999999999999999          6777653     1222


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      ....+...  ....+     ...+..+.+++.+||+.||.+||++.+.+
T Consensus       204 ~~~~i~~~--~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         204 MYDNILNK--PLQLK-----PNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHHhC--CcCCC-----CCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            22222111  11111     23567899999999999999999887543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=8.5e-40  Score=314.83  Aligned_cols=256  Identities=22%  Similarity=0.419  Sum_probs=196.8

Q ss_pred             hccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      ..+|.+.+.||+|+||.||+|++.         +..||+|.+......  ....+.|+..+..+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            367899999999999999999751         346999987543221  12234455555557 899999999998766


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                          ...++||||+++|+|.+++.+                 ..+++.+++.++.||+.||.|||+.        +++||
T Consensus        94 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--------givH~  161 (304)
T cd05101          94 ----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ--------KCIHR  161 (304)
T ss_pred             ----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC--------Ceeec
Confidence                347999999999999999854                 2478888999999999999999998        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......++..|+|||++.+.      .++.++||||||+++|||+
T Consensus       162 dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~  233 (304)
T cd05101         162 DLAARNVLVTENNVMKIADFGLARDVNNIDYYK--KTTNGRLPVKWMAPEALFDR------VYTHQSDVWSFGVLMWEIF  233 (304)
T ss_pred             ccccceEEEcCCCcEEECCCccceecccccccc--cccCCCCCceeeCchhhccC------CCCchhhHHHHHHHHHHHH
Confidence            999999999999999999999997664322211  11223456789999998765      6678999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      + |          ..||...     ....+.+.+.. ..+...+     ..++..+.+++.+||+.+|++|||+.++++.
T Consensus       234 ~~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         234 TLG----------GSPYPGI-----PVEELFKLLKE-GHRMDKP-----ANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             cCC----------CCCcccC-----CHHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            8 5          5566443     23333333322 1222222     3466789999999999999999999999999


Q ss_pred             HHHHhhc
Q psy14889        425 LIKLACA  431 (443)
Q Consensus       425 L~~l~~~  431 (443)
                      |+++...
T Consensus       293 l~~~~~~  299 (304)
T cd05101         293 LDRILTL  299 (304)
T ss_pred             HHHHHHh
Confidence            9998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=6.7e-40  Score=313.67  Aligned_cols=254  Identities=23%  Similarity=0.454  Sum_probs=194.9

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||++.+.       ...+|+|.+.......  .....|+..+..+ +|+||+++++++...  
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--   88 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE--   88 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC--
Confidence            367999999999999999999873       2578999876432211  1122444455557 899999999998766  


Q ss_pred             cccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCC
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDI  267 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDl  267 (443)
                        ..++++|||+++|+|.++++.                 ..+++..++.++.|++.||.|||+.        +|+||||
T Consensus        89 --~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--------~ivH~dl  158 (293)
T cd05053          89 --GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK--------KCIHRDL  158 (293)
T ss_pred             --CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC--------Ccccccc
Confidence              347999999999999999853                 3588999999999999999999988        9999999


Q ss_pred             CCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-
Q psy14889        268 KSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-  346 (443)
Q Consensus       268 k~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-  346 (443)
                      ||+|||++.++.+||+|||+++.+........  .....++..|+|||.+.+.      .++.++|||||||++|||++ 
T Consensus       159 kp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~  230 (293)
T cd05053         159 AARNVLVTEDHVMKIADFGLARDIHHIDYYRK--TTNGRLPVKWMAPEALFDR------VYTHQSDVWSFGVLLWEIFTL  230 (293)
T ss_pred             ceeeEEEcCCCeEEeCccccccccccccceec--cCCCCCCccccCHHHhccC------CcCcccceeehhhHHHHHhcC
Confidence            99999999999999999999986654221111  1222356789999998765      56789999999999999997 


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      |          ..||...     ......+.... ...+..+     ..++..+.+|+.+||+.||++|||+.++++.|+
T Consensus       231 g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~  289 (293)
T cd05053         231 G----------GSPYPGI-----PVEELFKLLKE-GYRMEKP-----QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD  289 (293)
T ss_pred             C----------CCCCCCC-----CHHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence            6          5666543     22233333322 2222222     235678999999999999999999999999999


Q ss_pred             HHh
Q psy14889        427 KLA  429 (443)
Q Consensus       427 ~l~  429 (443)
                      ++.
T Consensus       290 ~~~  292 (293)
T cd05053         290 RML  292 (293)
T ss_pred             Hhh
Confidence            875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.4e-40  Score=311.55  Aligned_cols=251  Identities=23%  Similarity=0.404  Sum_probs=195.3

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||+|...       +..||+|.+......  ......|+..+..++||||+++++++...   
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---   81 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG---   81 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC---
Confidence            468999999999999999999874       267999987544321  11223455555668999999999998776   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                       ...++||||+++|+|.+++..           ..+++..++.++.|++.||.|||+.        +++||||||+|||+
T Consensus        82 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~di~p~nill  152 (277)
T cd05032          82 -QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK--------KFVHRDLAARNCMV  152 (277)
T ss_pred             -CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccccChheEEE
Confidence             347999999999999999853           2367889999999999999999988        99999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCc
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGI  353 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~  353 (443)
                      +.++.+||+|||+++.+......  .......++..|+|||.+.+.      .++.++|||||||++||++| |      
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~t~g------  218 (277)
T cd05032         153 AEDLTVKIGDFGMTRDIYETDYY--RKGGKGLLPVRWMAPESLKDG------VFTTKSDVWSFGVVLWEMATLA------  218 (277)
T ss_pred             cCCCCEEECCcccchhhccCccc--ccCCCCCccccccCHHHHhcC------CCCcccchHHHHHHHHHhhccC------
Confidence            99999999999998765432211  111234567899999998765      56789999999999999998 6      


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                          ..||...     ......+.+. ....+..+     ..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       219 ----~~p~~~~-----~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         219 ----EQPYQGL-----SNEEVLKFVI-DGGHLDLP-----ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             ----CCCCccC-----CHHHHHHHHh-cCCCCCCC-----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence                6677543     2233333333 22333333     235678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.3e-39  Score=305.88  Aligned_cols=245  Identities=22%  Similarity=0.355  Sum_probs=188.1

Q ss_pred             eeeeecCeEEEEEEEC----CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        143 CIGKGRYGEVWRGVWH----GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      .||+|+||.||+|.+.    +..||+|++.......  .....|+..+..++||||+++++++...     ..++||||+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~e~~   76 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVMEMA   76 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEEEeC
Confidence            3899999999999873    4569999886543222  1223555666669999999999987533     368999999


Q ss_pred             CcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        217 SFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       217 ~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      ++|+|.+++.  ...+++.+++.++.|++.||.|||+.        +++||||||+|||++.++.+||+|||++......
T Consensus        77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK--------NFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc--------CeeecccchheEEEcCCCcEEeccCCccccccCC
Confidence            9999999995  35789999999999999999999998        9999999999999999999999999999765432


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ..... ......++..|+|||.+...      .++.++||||||+++||+++ |          ..||.+..     ...
T Consensus       149 ~~~~~-~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~g----------~~p~~~~~-----~~~  206 (257)
T cd05115         149 DSYYK-ARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGITMWEAFSYG----------QKPYKKMK-----GPE  206 (257)
T ss_pred             cccee-ccCCCCCCcccCCHHHHccC------CCCchhhHHHHHHHHHHHhcCC----------CCCcCcCC-----HHH
Confidence            22111 11122345789999998765      56689999999999999996 7          67776542     122


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ....+.. ..++..+     ..++.++.+++.+||+.||++||++.+|.+.|+.+
T Consensus       207 ~~~~~~~-~~~~~~~-----~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         207 VMSFIEQ-GKRLDCP-----AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            2232222 2223332     33567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-40  Score=313.52  Aligned_cols=247  Identities=23%  Similarity=0.304  Sum_probs=191.1

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +|+..+.||+|+||.||++..  +++.||+|++......    ......|+..+..++||||+++++.+.+.    ..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~   76 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK----DALC   76 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC----CeEE
Confidence            477889999999999999987  5889999988643211    11223466666669999999999998766    3589


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +||||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+||++++++.++|+|||+
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~~l~Dfg~  148 (285)
T cd05605          77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE--------RIVYRDLKPENILLDDYGHIRISDLGL  148 (285)
T ss_pred             EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence            99999999999988743   4689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........     .....|+..|+|||++.+.      .++.++|||||||++|||++|          ..||......
T Consensus       149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Diws~G~~l~el~~g----------~~pf~~~~~~  207 (285)
T cd05605         149 AVEIPEGET-----IRGRVGTVGYMAPEVVKNE------RYTFSPDWWGLGCLIYEMIEG----------KSPFRQRKEK  207 (285)
T ss_pred             ceecCCCCc-----cccccCCCCccCcHHhcCC------CCCccccchhHHHHHHHHHHC----------CCCCCCCchh
Confidence            876542211     1234789999999999765      667899999999999999999          6777653211


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                       ...+.+...+.  ......+     ...+..+.+|+.+||+.||++||     +++++++.
T Consensus       208 -~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         208 -VKREEVERRVK--EDQEEYS-----EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             -hHHHHHHHHhh--hcccccC-----cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence             11112222221  1112222     23567799999999999999999     88888653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=6.4e-40  Score=316.17  Aligned_cols=256  Identities=23%  Similarity=0.418  Sum_probs=196.3

Q ss_pred             hccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      .++|.+.+.||+|+||.||++.+.         ...+|+|.+......  ......|+..+..+ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            367999999999999999999862         246999988653211  11223455555556 799999999998766


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                          ...++||||+++|+|.+++..                 ..+++.+++.++.|++.||+|||+.        +++||
T Consensus        97 ----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------gi~H~  164 (307)
T cd05098          97 ----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK--------KCIHR  164 (307)
T ss_pred             ----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--------Ccccc
Confidence                347999999999999999964                 2488899999999999999999988        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++|||||||++|||+
T Consensus       165 dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~  236 (307)
T cd05098         165 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYK--KTTNGRLPVKWMAPEALFDR------IYTHQSDVWSFGVLLWEIF  236 (307)
T ss_pred             cccHHheEEcCCCcEEECCCcccccccccchhh--ccccCCCccceeChHHhccC------CCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999987654321111  01122345689999998765      5678999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      + |          ..||...     ..+.+...+.. ......+     ..++.++.+++.+||+.+|++|||+.++++.
T Consensus       237 ~~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         237 TLG----------GSPYPGV-----PVEELFKLLKE-GHRMDKP-----SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             cCC----------CCCCCcC-----CHHHHHHHHHc-CCCCCCC-----CcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            8 5          5566542     22333333322 2222222     2356789999999999999999999999999


Q ss_pred             HHHHhhc
Q psy14889        425 LIKLACA  431 (443)
Q Consensus       425 L~~l~~~  431 (443)
                      |+++...
T Consensus       296 l~~~~~~  302 (307)
T cd05098         296 LDRILAL  302 (307)
T ss_pred             HHHHHHH
Confidence            9998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.5e-40  Score=328.10  Aligned_cols=252  Identities=21%  Similarity=0.277  Sum_probs=189.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+++.  +++.||||++.....    .......|+..+..++||||+++++.+.+.    ..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~----~~~   76 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK----DNL   76 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CEE
Confidence            3689999999999999999987  588999998854321    112223455555669999999999998766    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+|
T Consensus        77 ~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivHrDlkp~Nill~~~~~ikL~DFG~a  148 (376)
T cd05598          77 YFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM--------GFIHRDIKPDNILIDRDGHIKLTDFGLC  148 (376)
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCCCCHHHEEECCCCCEEEEeCCCC
Confidence            999999999999999865 5678899999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCc---------------------------------------CCCCCCCcccccCcccccccccccccCcCCCC
Q psy14889        289 VSYSQLSNK---------------------------------------MDIPPNPRVGTKRYMSPEILDESINMDCFESF  329 (443)
Q Consensus       289 ~~~~~~~~~---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  329 (443)
                      ..+......                                       .........||+.|+|||++.+.      .++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~  222 (376)
T cd05598         149 TGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT------GYT  222 (376)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC------CCC
Confidence            533210000                                       00001234799999999999876      667


Q ss_pred             CccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhc
Q psy14889        330 KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWH  409 (443)
Q Consensus       330 ~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  409 (443)
                      .++|||||||++|||++|          ..||....+    .+........ ......+.   ....+.++.+++.+|+ 
T Consensus       223 ~~~DiwSlGvilyell~G----------~~Pf~~~~~----~~~~~~i~~~-~~~~~~~~---~~~~s~~~~~li~~l~-  283 (376)
T cd05598         223 QLCDWWSVGVILYEMLVG----------QPPFLADTP----AETQLKVINW-ETTLHIPS---QAKLSREASDLILRLC-  283 (376)
T ss_pred             cceeeeeccceeeehhhC----------CCCCCCCCH----HHHHHHHhcc-CccccCCC---CCCCCHHHHHHHHHHh-
Confidence            899999999999999999          777765321    1121222111 11112221   1235667889999977 


Q ss_pred             CCcCCCC---cHHHHHHH
Q psy14889        410 QNANVRL---SALRVKKT  424 (443)
Q Consensus       410 ~dP~~Rp---s~~evl~~  424 (443)
                      .+|.+|+   |+.++++.
T Consensus       284 ~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         284 CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             cCHhhcCCCCCHHHHhCC
Confidence            5999999   88988764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.5e-39  Score=305.92  Aligned_cols=249  Identities=24%  Similarity=0.407  Sum_probs=193.8

Q ss_pred             ccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|.+.+.||+|+||.||+|.+. +..+|+|.+............|+..+..++|+|++++++++...     ..+++||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e   80 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE-----PIYIVTE   80 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CcEEEEE
Confidence            57889999999999999999884 45799998765443333334566666669999999999987432     3589999


Q ss_pred             ccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        215 YHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       215 ~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +++|+||||+||++++++.+||+|||++...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~--------~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~  152 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM--------NYIHRDLRAANILVGDNLVCKIADFGLARLI  152 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeecccCcceEEEcCCCeEEECCCccceEc
Confidence            9999999999964   3478999999999999999999988        9999999999999999999999999999765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......   .....++..|+|||...+.      .++.++||||||+++|||+| |          ..||.+..     
T Consensus       153 ~~~~~~~---~~~~~~~~~y~~Pe~~~~~------~~~~~~Di~slG~~l~el~t~g----------~~p~~~~~-----  208 (260)
T cd05069         153 EDNEYTA---RQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELVTKG----------RVPYPGMV-----  208 (260)
T ss_pred             cCCcccc---cCCCccchhhCCHHHhccC------CcChHHHHHHHHHHHHHHHhCC----------CCCCCCCC-----
Confidence            4322111   1223466789999988765      66789999999999999999 6          66776532     


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      .......+.. ...+..+     ...+..+.+++.+||+.||++||+++++++.|++
T Consensus       209 ~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         209 NREVLEQVER-GYRMPCP-----QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHc-CCCCCCC-----cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            1222222221 1222222     2356789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=9.5e-40  Score=305.62  Aligned_cols=244  Identities=23%  Similarity=0.372  Sum_probs=186.4

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      +.||+|+||.||+|..  +++.||+|.+......  ......|+..+..++||||+++++++....    ..++||||++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIYIVMELVQ   76 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----CeEEEEeecc
Confidence            4689999999999987  6889999987543221  122334555556699999999999987763    4799999999


Q ss_pred             cccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccC
Q psy14889        218 FGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS  295 (443)
Q Consensus       218 ~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~  295 (443)
                      +++|.+++..  ..+++.+++.++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++.......
T Consensus        77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  148 (252)
T cd05084          77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK--------HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV  148 (252)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccccchheEEEcCCCcEEECccccCccccccc
Confidence            9999999864  3589999999999999999999998        99999999999999999999999999987544221


Q ss_pred             CcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       296 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ...  ......++..|+|||.+.++      .++.++||||||+++|||++ |          ..||....     ....
T Consensus       149 ~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~e~~~~~----------~~p~~~~~-----~~~~  205 (252)
T cd05084         149 YAS--TGGMKQIPVKWTAPEALNYG------RYSSESDVWSFGILLWEAFSLG----------AVPYANLS-----NQQT  205 (252)
T ss_pred             ccc--cCCCCCCceeecCchhhcCC------CCChHHHHHHHHHHHHHHHhCC----------CCCccccC-----HHHH
Confidence            110  01111234579999998776      56789999999999999998 6          56665431     1222


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ...+.. ......+     ..++..+.+++.+||+.||++|||+.++++.|+
T Consensus       206 ~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         206 REAIEQ-GVRLPCP-----ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHc-CCCCCCc-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            222211 1122222     335678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0199|consensus

Probab=100.00  E-value=9.7e-41  Score=327.83  Aligned_cols=249  Identities=25%  Similarity=0.432  Sum_probs=202.1

Q ss_pred             ccccccceeeeecCeEEEEEEEC---Cc--eeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---GE--NVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---~~--~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      +++.+.++||+|.||.|++|.|+   |+  .||||.+.....    +++.+|+.+  +.+|+|||+++|||+..+..   
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~--M~~L~H~hliRLyGvVl~qp---  184 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASH--MLKLQHPHLIRLYGVVLDQP---  184 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHH--HHhccCcceeEEeeeeccch---
Confidence            56788899999999999999994   43  689999865433    344555544  44599999999999988742   


Q ss_pred             cEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                        +.||+|+++.|+|.+.|++   ..|.......++.|||.||.||.++        ++|||||.++|+|+...-.+||+
T Consensus       185 --~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk--------rlvHRDLAARNlllasprtVKI~  254 (1039)
T KOG0199|consen  185 --AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK--------RLVHRDLAARNLLLASPRTVKIC  254 (1039)
T ss_pred             --hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh--------hhhhhhhhhhhheecccceeeee
Confidence              5899999999999999975   4577888899999999999999999        89999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      ||||.+.+......+.. .....-...|.|||.+...      .++.+||||+|||++|||+|+         ++.||.+
T Consensus       255 DFGLmRaLg~ned~Yvm-~p~rkvPfAWCaPEsLrh~------kFShaSDvWmyGVTiWEMFty---------GEePW~G  318 (1039)
T KOG0199|consen  255 DFGLMRALGENEDMYVM-APQRKVPFAWCAPESLRHR------KFSHASDVWMYGVTIWEMFTY---------GEEPWVG  318 (1039)
T ss_pred             cccceeccCCCCcceEe-cCCCcCcccccCHhHhccc------cccccchhhhhhhhHHhhhcc---------CCCCCCC
Confidence            99999988876554422 2233445789999999987      778899999999999999987         4889988


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ..     -..+.+.+. +..+...|     ..|++.++++|++||..+|++|||+..|.+.+-
T Consensus       319 ~~-----g~qIL~~iD-~~erLpRP-----k~csedIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  319 CR-----GIQILKNID-AGERLPRP-----KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             CC-----HHHHHHhcc-ccccCCCC-----CCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            63     234444444 34444433     459999999999999999999999999985443

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=8.1e-40  Score=314.92  Aligned_cols=256  Identities=24%  Similarity=0.405  Sum_probs=193.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc--eeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE--NVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~--~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|.+  ++.  .+|+|.+......  ......|+..+..+ +||||+++++++....    .
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~----~   82 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----Y   82 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----C
Confidence            5789999999999999999987  344  4577766432211  11223455555557 8999999999987763    4


Q ss_pred             EEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +++||||+++|+|.+++++.                 .+++.+++.++.|++.||+|||+.        +++||||||+|
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--------gi~H~dlkp~N  154 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--------QFIHRDLAARN  154 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC--------Cccccccchhe
Confidence            79999999999999998532                 478999999999999999999998        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      ||++.++.+||+|||++........     .....++..|+|||.+.+.      .++.++|||||||++|||+| |   
T Consensus       155 ili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g---  220 (303)
T cd05088         155 ILVGENYVAKIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYS------VYTTNSDVWSYGVLLWEIVSLG---  220 (303)
T ss_pred             EEecCCCcEEeCccccCcccchhhh-----cccCCCcccccCHHHHhcc------CCcccccchhhhhHHHHHHhcC---
Confidence            9999999999999999863321111     1112345679999988765      56689999999999999998 7   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                             ..||....     ..+..+... .......+     ...+..+.+|+.+||+.+|++||++.++++.|.++.+
T Consensus       221 -------~~p~~~~~-----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         221 -------GTPYCGMT-----CAELYEKLP-QGYRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             -------CCCcccCC-----hHHHHHHHh-cCCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                   66775431     122222221 11111122     2245679999999999999999999999999999877


Q ss_pred             ccccc
Q psy14889        431 ADMYI  435 (443)
Q Consensus       431 ~~~~~  435 (443)
                      .....
T Consensus       283 ~~~~~  287 (303)
T cd05088         283 ERKTY  287 (303)
T ss_pred             hhhhh
Confidence            65543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.2e-39  Score=310.55  Aligned_cols=266  Identities=23%  Similarity=0.359  Sum_probs=196.0

Q ss_pred             ccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.|++.+.||+|+||.||++++      ++..||+|.+......  ....+.|+..+..++||||+++++++.....  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~   81 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG--N   81 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC--C
Confidence            4578899999999999999975      3678999988644322  2233456667777999999999998876532  3


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++||||+++++|.+++.+  ..+++.++..++.|++.||+|||+.        +++||||||+||+++.++.+||+||
T Consensus        82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~--------gi~H~dlkp~Nil~~~~~~~~l~df  153 (284)
T cd05079          82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR--------QYVHRDLAARNVLVESEHQVKIGDF  153 (284)
T ss_pred             ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecccchheEEEcCCCCEEECCC
Confidence            47899999999999999864  3589999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc----ccccCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI----FEEYKAPY  361 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~----~~~~~~P~  361 (443)
                      |+++.+........ ......++..|+|||.+.+.      .++.++||||||+++|||+|++.+...    +.....|.
T Consensus       154 g~~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~------~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~  226 (284)
T cd05079         154 GLTKAIETDKEYYT-VKDDLDSPVFWYAPECLIQS------KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT  226 (284)
T ss_pred             ccccccccCcccee-ecCCCCCCccccCHHHhccC------CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc
Confidence            99976653322111 11234567789999998765      667899999999999999998543210    00000010


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..    ............ .......+     ..++..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus       227 ~~----~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         227 HG----QMTVTRLVRVLE-EGKRLPRP-----PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cc----cccHHHHHHHHH-cCccCCCC-----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            00    011111111111 11111112     33667899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.5e-39  Score=313.10  Aligned_cols=257  Identities=21%  Similarity=0.430  Sum_probs=197.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|+..+.||+|+||.||+|.+  +|.    .||+|.+.......  .....|+..+..++||||++++|++....    
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----   82 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT----   82 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC----
Confidence            5788889999999999999987  444    47888775433221  12234556666699999999999986542    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++++||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+||
T Consensus        83 -~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~ivH~dikp~Nill~~~~~~kL~Df  153 (303)
T cd05110          83 -IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER--------RLVHRDLAARNVLVKSPNHVKITDF  153 (303)
T ss_pred             -ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc--------CeeccccccceeeecCCCceEEccc
Confidence             4689999999999999865  3589999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.+.......  ......++..|+|||.+.+.      .++.++||||||+++|||++ |          +.||.+.
T Consensus       154 g~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~------~~~~~~DiwslG~~l~el~t~g----------~~p~~~~  215 (303)
T cd05110         154 GLARLLEGDEKEY--NADGGKMPIKWMALECIHYR------KFTHQSDVWSYGVTIWELMTFG----------GKPYDGI  215 (303)
T ss_pred             cccccccCccccc--ccCCCccccccCCHHHhccC------CCChHHHHHHHHHHHHHHHhCC----------CCCCCCC
Confidence            9997665332211  11223456789999998765      66789999999999999997 6          5676553


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                           ........+.. ...+..+     ..++..+.+++.+||..||++||++.++++.|+++......
T Consensus       216 -----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~  274 (303)
T cd05110         216 -----PTREIPDLLEK-GERLPQP-----PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQR  274 (303)
T ss_pred             -----CHHHHHHHHHC-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhh
Confidence                 22333333322 2222222     22456799999999999999999999999999998766543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.1e-39  Score=312.99  Aligned_cols=253  Identities=25%  Similarity=0.443  Sum_probs=192.2

Q ss_pred             ccccccceeeeecCeEEEEEEEC--Cc--eeEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--GE--NVAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~~--~vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|...  +.  .+++|.++....  .......|+..+.++ +||||+++++++...    ..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~----~~   77 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR----GY   77 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----Cc
Confidence            57899999999999999999873  33  468887753221  112234455555556 799999999998765    34


Q ss_pred             EEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +++|+||+++|+|.+++...                 .+++..+..++.|++.||+|||+.        +|+||||||+|
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~--------~ivH~dlkp~N  149 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK--------QFIHRDLAARN  149 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCcCCcce
Confidence            79999999999999998542                 478899999999999999999998        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      ||+++++.+||+|||++........     ......+..|+|||.+.+.      .++.++|||||||++|||++ |   
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlG~il~el~t~g---  215 (297)
T cd05089         150 VLVGENLASKIADFGLSRGEEVYVK-----KTMGRLPVRWMAIESLNYS------VYTTKSDVWSFGVLLWEIVSLG---  215 (297)
T ss_pred             EEECCCCeEEECCcCCCccccceec-----cCCCCcCccccCchhhccC------CCCchhhHHHHHHHHHHHHcCC---
Confidence            9999999999999999864321111     1111234579999998765      66789999999999999997 7   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                             ..||....     .......+.. ...+..+     ..++..+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus       216 -------~~pf~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         216 -------GTPYCGMT-----CAELYEKLPQ-GYRMEKP-----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             -------CCCCCCCC-----HHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                   66776532     2222222211 1122222     2356789999999999999999999999999998886


Q ss_pred             cc
Q psy14889        431 AD  432 (443)
Q Consensus       431 ~~  432 (443)
                      ..
T Consensus       278 ~~  279 (297)
T cd05089         278 AR  279 (297)
T ss_pred             hh
Confidence            44

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.1e-40  Score=311.05  Aligned_cols=249  Identities=33%  Similarity=0.499  Sum_probs=192.1

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHH---HHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e---~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|+||+||++..  +++.+|+|++..........+   .|+..+..++||||+++++++...    ...++|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~~v   76 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD----NYLYIV   76 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES----SEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc----cccccc
Confidence            67789999999999999998  466899999987655443332   366666668999999999998875    457899


Q ss_pred             ecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||+.+++|.+++. ...+++..+..++.|++.||.|||+.        +|+|+||||+||++++++.++|+|||.+...
T Consensus        77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~--------~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK--------GIVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT--------TEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccccccccccc
Confidence            99999999999997 68899999999999999999999999        9999999999999999999999999998754


Q ss_pred             cccCCcCCCCCCCcccccCcccccccc-cccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .....    ......+|..|+|||++. +.      ..+.++||||+|+++|+|++|          ..||...     .
T Consensus       149 ~~~~~----~~~~~~~~~~y~aPE~~~~~~------~~~~~~Di~slG~il~~l~~~----------~~p~~~~-----~  203 (260)
T PF00069_consen  149 SENNE----NFNPFVGTPEYMAPEVLQQGK------KYTRKSDIWSLGIILYELLTG----------KLPFEES-----N  203 (260)
T ss_dssp             TSTTS----EBSSSSSSGGGSCHHHHTTTS------SBSTHHHHHHHHHHHHHHHHS----------SSSSTTS-----S
T ss_pred             ccccc----ccccccccccccccccccccc------ccccccccccccccccccccc----------ccccccc-----c
Confidence            21111    123457889999999987 44      666899999999999999999          6676653     1


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .............................+.+++.+||+.||++|||+.++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  204 SDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             chhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111100000000000001112478999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.2e-39  Score=313.46  Aligned_cols=254  Identities=23%  Similarity=0.409  Sum_probs=195.5

Q ss_pred             hccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|.+.+.||+|+||.||++..       .+..||||++.......  .....|+..+..+ +||||+++++++.... 
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-  112 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG-  112 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence            36799999999999999999975       23479999876543221  1223455566668 7999999999987663 


Q ss_pred             cccEEEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                         ..++||||+++|+|.+++++.   .+++.++..++.|++.||.|||+.        +|+|+||||+|||++.++.+|
T Consensus       113 ---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~~  181 (302)
T cd05055         113 ---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK--------NCIHRDLAARNVLLTHGKIVK  181 (302)
T ss_pred             ---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeehhhhccceEEEcCCCeEE
Confidence               479999999999999999642   389999999999999999999998        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAP  360 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P  360 (443)
                      |+|||+++.+.......  ......++..|+|||.+.+.      .++.++|||||||++|||++ |          ..|
T Consensus       182 l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslGvil~el~t~g----------~~p  243 (302)
T cd05055         182 ICDFGLARDIMNDSNYV--VKGNARLPVKWMAPESIFNC------VYTFESDVWSYGILLWEIFSLG----------SNP  243 (302)
T ss_pred             ECCCcccccccCCCcee--ecCCCCcccccCCHhhhccC------CCCcHhHHHHHHHHHHHHHhCC----------CCC
Confidence            99999997664332111  11223467789999998776      56789999999999999998 7          566


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      |....    ..+...+... ....+..+     ...+.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus       244 ~~~~~----~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         244 YPGMP----VDSKFYKLIK-EGYRMAQP-----EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             cCCCC----chHHHHHHHH-cCCcCCCC-----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            65432    1222223222 12222222     22456899999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0610|consensus

Probab=100.00  E-value=6.6e-40  Score=306.09  Aligned_cols=248  Identities=23%  Similarity=0.340  Sum_probs=200.1

Q ss_pred             ccccccceeeeecCeEEEEEEECC--ceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~--~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.|++.+.||.|.-|+||+++..+  ..+|+|++.+...      .+.+.|+||+.+  ++||-+..||..+..+    .
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~--lDHPFlPTLYa~fet~----~  150 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSL--LDHPFLPTLYASFETD----K  150 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh--cCCCccchhhheeecc----c
Confidence            578899999999999999999954  7899999865322      233446777766  9999999999999887    4


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..++|||||+||+|...+++   +.+++..+..++.+|+.||+|||-.        |||.|||||+||||.++|++-|+|
T Consensus       151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml--------GivYRDLKPENILvredGHIMLsD  222 (459)
T KOG0610|consen  151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML--------GIVYRDLKPENILVREDGHIMLSD  222 (459)
T ss_pred             eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh--------ceeeccCCcceeEEecCCcEEeee
Confidence            67999999999999999875   4699999999999999999999988        999999999999999999999999


Q ss_pred             cCCccccccc--------------------------------C-Cc-------------------CCCCCCCcccccCcc
Q psy14889        285 FGLAVSYSQL--------------------------------S-NK-------------------MDIPPNPRVGTKRYM  312 (443)
Q Consensus       285 fGla~~~~~~--------------------------------~-~~-------------------~~~~~~~~~gt~~y~  312 (443)
                      |.|+......                                . ..                   .......++||-.|.
T Consensus       223 FDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYl  302 (459)
T KOG0610|consen  223 FDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYL  302 (459)
T ss_pred             ccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccc
Confidence            9987432110                                0 00                   001123568999999


Q ss_pred             cccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCC
Q psy14889        313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWV  392 (443)
Q Consensus       313 aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (443)
                      |||++.+.      ..+.++|+|+|||++|||+.|          ..||.+..    ..+.+.+++.   +.+.+|..  
T Consensus       303 APEvI~G~------GHgsAVDWWtfGIflYEmLyG----------~TPFKG~~----~~~Tl~NIv~---~~l~Fp~~--  357 (459)
T KOG0610|consen  303 APEVIRGE------GHGSAVDWWTFGIFLYEMLYG----------TTPFKGSN----NKETLRNIVG---QPLKFPEE--  357 (459)
T ss_pred             cceeeecC------CCCchhhHHHHHHHHHHHHhC----------CCCcCCCC----chhhHHHHhc---CCCcCCCC--
Confidence            99999987      666899999999999999999          88998752    3345555553   34445542  


Q ss_pred             CchhHHHHHHHHHHHhcCCcCCCCc----HHHHHH
Q psy14889        393 SDSTLNAMTKVMKECWHQNANVRLS----ALRVKK  423 (443)
Q Consensus       393 ~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~  423 (443)
                       ...+..+++||++.|.+||++|..    +.||.+
T Consensus       358 -~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  358 -PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             -CcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence             246778999999999999999998    666644

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=9.2e-40  Score=310.43  Aligned_cols=240  Identities=23%  Similarity=0.325  Sum_probs=182.2

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||.||++..  +|+.+|+|.+......    ......|+..+..++||||+++++++...    ..+++||||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~----~~~~lv~e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK----THLCLVMSLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC----CeEEEEEecCC
Confidence            69999999999987  5899999988542211    11122345555669999999999988765    45899999999


Q ss_pred             cccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        218 FGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       218 ~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +|+|.+++..   ..+++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+||+|||++......
T Consensus        77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~  148 (277)
T cd05607          77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM--------DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG  148 (277)
T ss_pred             CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC--------CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence            9999988743   3588999999999999999999998        9999999999999999999999999998765432


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..     .....||..|+|||++.+.      .++.++|||||||++|||++|          ..||....... ....+
T Consensus       149 ~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~~g----------~~p~~~~~~~~-~~~~~  206 (277)
T cd05607         149 KT-----ITQRAGTNGYMAPEILKEE------PYSYPVDWFAMGCSIYEMVAG----------RTPFKDHKEKV-AKEEL  206 (277)
T ss_pred             ce-----eeccCCCCCccCHHHHccC------CCCCchhHHHHHHHHHHHHhC----------CCCCCCCcchh-hHHHH
Confidence            21     1234688999999999876      567899999999999999999          66665432111 11122


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......  .....+    ....+.++.+|+.+||+.||++||++.|+++
T Consensus       207 ~~~~~~--~~~~~~----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         207 KRRTLE--DEVKFE----HQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHhhc--cccccc----cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            111111  111111    1235678999999999999999999977654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.1e-39  Score=304.97  Aligned_cols=252  Identities=22%  Similarity=0.357  Sum_probs=186.9

Q ss_pred             ceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|.+.     +..||+|.+......  ......|+..+..++||||+++++++...+.   ..+++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e   77 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG---SPLVVLP   77 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC---CcEEEEe
Confidence            46899999999999862     357999987543221  1122345555666999999999998764432   3689999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+.+|+|.+++.+  ..+++..++.++.|++.||.|||+.        +++||||||+|||+++++.+||+|||+++...
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK--------KFVHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccccCcceEEEcCCCcEEECCcccccccc
Confidence            9999999999964  3467888899999999999999988        99999999999999999999999999997554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ..............++..|+|||.+.+.      .++.++||||||+++|||++|+         ..||...     ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~~---------~~~~~~~-----~~~  209 (262)
T cd05058         150 DKEYYSVHNHTGAKLPVKWMALESLQTQ------KFTTKSDVWSFGVLLWELMTRG---------APPYPDV-----DSF  209 (262)
T ss_pred             CCcceeecccccCcCCccccChhHhccC------ccchHHHHHHHHHHHHHHHcCC---------CCCCCCC-----CHH
Confidence            3211111111233467789999998765      6678999999999999999962         3344432     112


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      .....+. ....+..+     ..++..+.+++.+||+.+|++||++.++++.|+++..
T Consensus       210 ~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         210 DITVYLL-QGRRLLQP-----EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHh-cCCCCCCC-----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            2222221 12222222     2345679999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.3e-39  Score=309.19  Aligned_cols=251  Identities=22%  Similarity=0.377  Sum_probs=191.6

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||+|.+.       +..||+|.+......  ......|+..+..++|+||+++++++.+..  
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL--   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--
Confidence            367999999999999999999884       357888876533221  122334555666699999999999887663  


Q ss_pred             ccEEEeeecccCcccHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNRT--------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~~--------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                        ..++||||+++|+|.+++...        .+++..++.++.||+.||+|||+.        +++||||||+||+++.+
T Consensus        83 --~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivH~dlkp~nil~~~~  152 (277)
T cd05036          83 --PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN--------HFIHRDIAARNCLLTCK  152 (277)
T ss_pred             --CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccchheEEEecc
Confidence              368999999999999998642        489999999999999999999998        99999999999999876


Q ss_pred             C---cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCc
Q psy14889        278 G---TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGI  353 (443)
Q Consensus       278 ~---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~  353 (443)
                      +   .+||+|||+++.+.......  .......+..|+|||++.+.      .++.++|||||||++|||++ |      
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~~g------  218 (277)
T cd05036         153 GPGRVAKIADFGMARDIYRASYYR--KGGRAMLPIKWMPPEAFLDG------IFTSKTDVWSFGVLLWEIFSLG------  218 (277)
T ss_pred             CCCcceEeccCccccccCCcccee--cCCCCCccHhhCCHHHHhcC------CcCchhHHHHHHHHHHHHHcCC------
Confidence            5   69999999997663321111  11122345689999999766      67789999999999999997 6      


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                          ..||....     .......+.. ..+...+     ..++..+.+++.+||+.||++|||+.+|++.|+
T Consensus       219 ----~~pf~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         219 ----YMPYPGRT-----NQEVMEFVTG-GGRLDPP-----KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             ----CCCCCCCC-----HHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence                66776532     2233333221 2222222     335678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-39  Score=312.93  Aligned_cols=257  Identities=24%  Similarity=0.339  Sum_probs=190.9

Q ss_pred             ccccccceeeeecCeEEEEEEECC----------------ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHG----------------ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~----------------~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      ++|++.+.||+|+||.||++...+                ..||+|.+......  ....+.|+..+..++|+||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            589999999999999999987522                24899987643221  122345666667799999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhccc-------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEE
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAH  264 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiH  264 (443)
                      ++....    ..++||||+++++|.+++...             .+++.+++.++.|++.||.|||+.        +++|
T Consensus        85 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--------~i~H  152 (295)
T cd05097          85 VCVSDD----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL--------NFVH  152 (295)
T ss_pred             EEcCCC----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc--------Ceec
Confidence            987663    479999999999999998542             368889999999999999999998        9999


Q ss_pred             eCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHH
Q psy14889        265 RDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV  344 (443)
Q Consensus       265 rDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~el  344 (443)
                      +||||+||++++++.+||+|||++.........  .......++..|+|||.+..+      .++.++|||||||++|||
T Consensus       153 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlG~~l~el  224 (295)
T cd05097         153 RDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEM  224 (295)
T ss_pred             cccChhhEEEcCCCcEEecccccccccccCcce--eccCcCcCceeecChhhhccC------CcCchhhHHHHHHHHHHH
Confidence            999999999999999999999998765432111  111223456789999998765      667899999999999999


Q ss_pred             HhcccCCCcccccCCCCCCCCCCCCChHHHHhhhh--hcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVIC--IDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       345 ltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      +++..        ..||.....    .+.......  ..........  .+...+..+.+|+.+||+.||++|||+++|+
T Consensus       225 ~~~~~--------~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~  290 (295)
T cd05097         225 FTLCK--------EQPYSLLSD----EQVIENTGEFFRNQGRQIYLS--QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH  290 (295)
T ss_pred             HHcCC--------CCCCcccCh----HHHHHHHHHhhhhccccccCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            98521        456654321    111111110  0001111110  1123567899999999999999999999999


Q ss_pred             HHHH
Q psy14889        423 KTLI  426 (443)
Q Consensus       423 ~~L~  426 (443)
                      +.|+
T Consensus       291 ~~l~  294 (295)
T cd05097         291 HFLR  294 (295)
T ss_pred             HHHh
Confidence            9886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=2.7e-39  Score=312.89  Aligned_cols=255  Identities=23%  Similarity=0.434  Sum_probs=194.6

Q ss_pred             ccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccC
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSR  203 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~  203 (443)
                      .+|.+.+.||+|+||.||+++..         ...+|+|.+.......  .....|+..+..+ +||||+++++++... 
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-   90 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE-   90 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC-
Confidence            67889999999999999999752         3468999876433221  1223455555556 699999999998765 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                         ..++++|||+++|+|.+++..                 ..+++.++..++.|++.||.|||+.        +++|||
T Consensus        91 ---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--------gi~H~d  159 (314)
T cd05099          91 ---GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR--------RCIHRD  159 (314)
T ss_pred             ---CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC--------Ceeecc
Confidence               347999999999999999853                 2488999999999999999999998        999999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      |||+|||++.++.+||+|||+++..........  .....++..|+|||.+.+.      .++.++||||||+++|||++
T Consensus       160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~~l~el~~  231 (314)
T cd05099         160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYKK--TSNGRLPVKWMAPEALFDR------VYTHQSDVWSFGILMWEIFT  231 (314)
T ss_pred             ccceeEEEcCCCcEEEccccccccccccccccc--cccCCCCccccCHHHHccC------CcCccchhhHHHHHHHHHHh
Confidence            999999999999999999999976543221110  1112345679999998765      66789999999999999999


Q ss_pred             -cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        347 -RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       347 -g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       |          ..||...     ........+.. ......+     ..++.++.+++.+||+.||++|||+.++++.|
T Consensus       232 ~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l  290 (314)
T cd05099         232 LG----------GSPYPGI-----PVEELFKLLRE-GHRMDKP-----SNCTHELYMLMRECWHAVPTQRPTFKQLVEAL  290 (314)
T ss_pred             CC----------CCCCCCC-----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence             5          5666543     22233333221 1222222     34567899999999999999999999999999


Q ss_pred             HHHhhc
Q psy14889        426 IKLACA  431 (443)
Q Consensus       426 ~~l~~~  431 (443)
                      +++...
T Consensus       291 ~~~~~~  296 (314)
T cd05099         291 DKVLAA  296 (314)
T ss_pred             HHHHHH
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.9e-39  Score=306.43  Aligned_cols=253  Identities=26%  Similarity=0.404  Sum_probs=194.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc---eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE---NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~---~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|+..+.||+|+||.||+|..  ++.   .+|+|.+......  ......|+..+..++||||+++++++....    .
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~   80 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----P   80 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----C
Confidence            5788899999999999999987  333   6899987543221  222345556666689999999999987663    4


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++++|.+++..  ..+++.++..++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~--------~i~H~dlkp~Nili~~~~~~kl~dfg  152 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM--------NYVHRDLAARNILVNSNLECKVSDFG  152 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccccchhhEEEcCCCcEEECCCc
Confidence            6999999999999999964  5689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      ++........... .......+..|+|||++...      .++.++|||||||++|||++ |          ..||....
T Consensus       153 ~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~------~~~~~~Dv~slG~il~ell~~g----------~~p~~~~~  215 (268)
T cd05063         153 LSRVLEDDPEGTY-TTSGGKIPIRWTAPEAIAYR------KFTSASDVWSFGIVMWEVMSFG----------ERPYWDMS  215 (268)
T ss_pred             cceecccccccce-eccCCCcCceecCHHHhhcC------CcChHhHHHHHHHHHHHHHhCC----------CCCCCcCC
Confidence            9876543221111 11112234579999998765      56789999999999999997 7          66775431


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                           .......+... .....+     ..++..+.+++.+||+.||++||++.+|++.|+++
T Consensus       216 -----~~~~~~~i~~~-~~~~~~-----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         216 -----NHEVMKAINDG-FRLPAP-----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             -----HHHHHHHHhcC-CCCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                 22333333221 111111     23567899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.9e-40  Score=320.32  Aligned_cols=235  Identities=26%  Similarity=0.343  Sum_probs=180.3

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHH-HHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||+||+|+.  +|+.||+|++......    ......|.. .+..++||||+++++++...    ..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~----~~~~lv~e   76 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT----EKLYFVLD   76 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC----CEEEEEEc
Confidence            4699999999999987  6899999998653211    111122222 23448999999999988766    45799999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|..++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~--------givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~  148 (325)
T cd05604          77 FVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI--------NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA  148 (325)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence            9999999988854 5799999999999999999999998        999999999999999999999999999864322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~G----------~~pf~~~-----~~~~  203 (325)
T cd05604         149 QSD----TTTTFCGTPEYLAPEVIRKQ------PYDNTVDWWCLGAVLYEMLYG----------LPPFYCR-----DVAE  203 (325)
T ss_pred             CCC----CcccccCChhhCCHHHHcCC------CCCCcCccccccceehhhhcC----------CCCCCCC-----CHHH
Confidence            111    12345799999999999876      667899999999999999999          6677653     1222


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      +...+..  .....+     ...+..+.+++++||+.||.+||++.+
T Consensus       204 ~~~~~~~--~~~~~~-----~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         204 MYDNILH--KPLVLR-----PGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHc--CCccCC-----CCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            2222211  111111     224567899999999999999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=4.4e-39  Score=303.36  Aligned_cols=254  Identities=24%  Similarity=0.389  Sum_probs=198.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---c-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---A-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||+|.+.....   . ......|+..+..++|+||+++++++...    ...
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~----~~~   77 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN----NEL   77 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC----CeE
Confidence            5799999999999999999998  589999998753221   1 22234566666679999999999998776    357


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||+++|+|.+++.+     ..+++.++..++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~dl~p~nil~~~~~~~~l~d  149 (267)
T cd08224          78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK--------RIMHRDIKPANVFITATGVVKLGD  149 (267)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC--------CEecCCcChhhEEECCCCcEEEec
Confidence            999999999999998852     4589999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++..+......    .....|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||...
T Consensus       150 ~~~~~~~~~~~~~----~~~~~~~~~y~apE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~  209 (267)
T cd08224         150 LGLGRFFSSKTTA----AHSLVGTPYYMSPERIHEN------GYNFKSDIWSLGCLLYEMAAL----------QSPFYGD  209 (267)
T ss_pred             cceeeeccCCCcc----cceecCCccccCHHHhccC------CCCchhcHHHHHHHHHHHHHC----------CCCcccC
Confidence            9998765432211    1234688899999998765      567899999999999999999          5666432


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      .   ............ ...+..+.    ...+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus       210 ~---~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         210 K---MNLYSLCKKIEK-CDYPPLPA----DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             C---ccHHHHHhhhhc-CCCCCCCh----hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            1   111122222111 12222221    235567999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.6e-40  Score=319.53  Aligned_cols=235  Identities=21%  Similarity=0.336  Sum_probs=184.3

Q ss_pred             ceeeeecCeEEEEEEE-----CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+++.     +|+.||+|++.....   .......|+..+..++||||+++++++.+.    ..+++||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE----GKLYLIL   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC----CEEEEEE
Confidence            5799999999999875     478999999865321   122234566666679999999999998766    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  149 (318)
T cd05582          78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL--------GIIYRDLKPENILLDEEGHIKLTDFGLSKESI  149 (318)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence            99999999999864 5689999999999999999999998        99999999999999999999999999987554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....    ......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||...     ...
T Consensus       150 ~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~el~tg----------~~p~~~~-----~~~  204 (318)
T cd05582         150 DHEK----KAYSFCGTVEYMAPEVVNRR------GHTQSADWWSFGVLMFEMLTG----------SLPFQGK-----DRK  204 (318)
T ss_pred             CCCC----ceecccCChhhcCHHHHcCC------CCCCccceeccceEeeeeccC----------CCCCCCC-----CHH
Confidence            3211    12345789999999999765      566899999999999999999          6777653     112


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      .....+.  .....+|     ...+..+.+++++||+.||++|||+.+
T Consensus       205 ~~~~~i~--~~~~~~p-----~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         205 ETMTMIL--KAKLGMP-----QFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHHH--cCCCCCC-----CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            2222221  1122223     235567999999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.7e-39  Score=311.31  Aligned_cols=256  Identities=23%  Similarity=0.351  Sum_probs=192.9

Q ss_pred             ccccccceeeeecCeEEEEEEECC------------------ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHG------------------ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGY  195 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~------------------~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l  195 (443)
                      ++|++.+.||+|+||.||+|...+                  ..||+|.+......  ......|+..+..++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            679999999999999999987632                  45899987654322  2223456666666999999999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhccc------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeE
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIA  263 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~ii  263 (443)
                      ++++...    ...+++|||+++++|.+++.+.            .+++..++.++.|++.||+|||+.        +++
T Consensus        85 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~--------~i~  152 (296)
T cd05051          85 LGVCTVD----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL--------NFV  152 (296)
T ss_pred             EEEEecC----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc--------Ccc
Confidence            9998776    3479999999999999998643            589999999999999999999998        999


Q ss_pred             EeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       264 HrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      ||||||+||+++.++.++|+|||+++........  .......++..|+|||.+.+.      .++.++|||||||++||
T Consensus       153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~e  224 (296)
T cd05051         153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLG------KFTTKSDVWAFGVTLWE  224 (296)
T ss_pred             ccccchhceeecCCCceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcC------CCCccchhhhhHHHHHH
Confidence            9999999999999999999999998765432211  111233567889999998765      66789999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhh---cCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICI---DQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      |+++..        ..||....    ....+......   .......+.   ...++.++.+++.+||+.||++|||+.+
T Consensus       225 l~~~~~--------~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rpt~~e  289 (296)
T cd05051         225 ILTLCR--------EQPYEHLT----DQQVIENAGHFFRDDGRQIYLPR---PPNCPKDIYELMLECWRRDEEDRPTFRE  289 (296)
T ss_pred             HHhcCC--------CCCCCCcC----hHHHHHHHHhccccccccccCCC---ccCCCHHHHHHHHHHhccChhcCCCHHH
Confidence            998411        45665431    11222222111   011111111   1235578999999999999999999999


Q ss_pred             HHHHHH
Q psy14889        421 VKKTLI  426 (443)
Q Consensus       421 vl~~L~  426 (443)
                      |++.|+
T Consensus       290 l~~~L~  295 (296)
T cd05051         290 IHLFLQ  295 (296)
T ss_pred             HHHHhc
Confidence            999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.6e-39  Score=310.39  Aligned_cols=247  Identities=26%  Similarity=0.442  Sum_probs=194.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .+|++.+.||+|+||.||+|..  ++..||+|.+....... .....|+..+..++|+||+++++.+...    ...++|
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~----~~~~lv   95 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWVV   95 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----CEEEEe
Confidence            6899999999999999999986  58899999886543322 2223455556668999999999998765    458999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |||+++|+|.+++.+..+++.++..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++....
T Consensus        96 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~--------gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~  167 (296)
T cd06654          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (296)
T ss_pred             ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence            9999999999999888899999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....|++.|+|||.+.+.      .++.++|||||||++|||++|          ..||....+    ..
T Consensus       168 ~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~~l~~g----------~~pf~~~~~----~~  223 (296)
T cd06654         168 PEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEG----------EPPYLNENP----LR  223 (296)
T ss_pred             ccccc----cCcccCCccccCHHHHcCC------CCCccchHHHHHHHHHHHHhC----------CCCCCCCCH----HH
Confidence            32211    1234688999999998765      566899999999999999999          667754321    11


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...... . ...+..+   .+...+..+.+++.+||..||++|||+.++++
T Consensus       224 ~~~~~~-~-~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         224 ALYLIA-T-NGTPELQ---NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             hHHHHh-c-CCCCCCC---CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            111111 1 1111111   12335567999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0577|consensus

Probab=100.00  E-value=9.6e-41  Score=322.47  Aligned_cols=250  Identities=28%  Similarity=0.418  Sum_probs=199.3

Q ss_pred             HHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH----HHHHHHHHhccCCCceeeeeeccccC
Q psy14889        130 IQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       130 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~----e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ......+.|.-.+.||.|+||.||-|..  +.+.||||.+.....+....    -.|+.-+..++|||+|.+.|+|... 
T Consensus        20 ~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-   98 (948)
T KOG0577|consen   20 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-   98 (948)
T ss_pred             ccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-
Confidence            3444556788889999999999999987  67899999986554332222    3566666679999999999998876 


Q ss_pred             CcccEEEeeecccCcccHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                         ...|||||||- ||-.+++  ++.++.+-++..|+.+.+.||+|||+.        +.||||||+.|||+++.|.||
T Consensus        99 ---~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~--------~~IHRDiKAGNILLse~g~VK  166 (948)
T KOG0577|consen   99 ---HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--------NRIHRDIKAGNILLSEPGLVK  166 (948)
T ss_pred             ---chHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--------hHHhhhccccceEecCCCeee
Confidence               34699999997 5888887  467899999999999999999999999        889999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||.|....        +.++++||+.|||||++......   .|+-|+||||||++..||..+          ++|+
T Consensus       167 LaDFGSAsi~~--------PAnsFvGTPywMAPEVILAMDEG---qYdgkvDvWSLGITCIELAER----------kPPl  225 (948)
T KOG0577|consen  167 LADFGSASIMA--------PANSFVGTPYWMAPEVILAMDEG---QYDGKVDVWSLGITCIELAER----------KPPL  225 (948)
T ss_pred             eccccchhhcC--------chhcccCCccccchhHheecccc---ccCCccceeeccchhhhhhhc----------CCCc
Confidence            99999985543        34678999999999998754222   777899999999999999999          5565


Q ss_pred             CCCCCCCCChHHHHhhhhhc-CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICID-QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ..+       ..+..+.-+. ...|.++    ..+-+..++.++..||+.-|.+|||.+++++.
T Consensus       226 FnM-------NAMSALYHIAQNesPtLq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  226 FNM-------NAMSALYHIAQNESPTLQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             cCc-------hHHHHHHHHHhcCCCCCC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            543       2333322222 2334444    35567789999999999999999999998763

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.1e-39  Score=309.67  Aligned_cols=256  Identities=22%  Similarity=0.360  Sum_probs=194.4

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||+|...       +..||+|.+.......  .....|+..+..++||||+++++++....  
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--   82 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ--   82 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--
Confidence            478999999999999999999752       3479999875433211  12234555556689999999999987663  


Q ss_pred             ccEEEeeecccCcccHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                        ..++||||+++|+|.+++++           ..+++..+..++.|++.||.|||+.        +|+||||||+|||+
T Consensus        83 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~H~dikp~nili  152 (288)
T cd05061          83 --PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK--------KFVHRDLAARNCMV  152 (288)
T ss_pred             --CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcCCCCChheEEE
Confidence              46999999999999999953           2346678899999999999999988        99999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcc
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF  354 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~  354 (443)
                      ++++.+||+|||+++.........  ......++..|+|||.+.++      .++.++|||||||++|||+++.      
T Consensus       153 ~~~~~~~L~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~------~~~~~~DvwslG~~l~el~~~~------  218 (288)
T cd05061         153 AHDFTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMAPESLKDG------VFTTSSDMWSFGVVLWEITSLA------  218 (288)
T ss_pred             cCCCcEEECcCCcccccccccccc--ccCCCcccccccCHHHhccC------CCChHhHHHHHHHHHHHHHhCC------
Confidence            999999999999987654322111  11223456789999998776      6678999999999999999831      


Q ss_pred             cccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       355 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                         ..||...     ..+...+.+.. ...+..+     ..++..+.+++.+||+.||++|||+.++++.|++...
T Consensus       219 ---~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         219 ---EQPYQGL-----SNEQVLKFVMD-GGYLDQP-----DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             ---CCCCCCC-----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence               5677553     22333333321 2222222     2355789999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.5e-39  Score=316.37  Aligned_cols=238  Identities=23%  Similarity=0.294  Sum_probs=179.7

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|..  +++.||+|++......    ......|+..+..+ +||||+++++++.+.    ..+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT----SRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC----CEEEEEEe
Confidence            4699999999999987  5789999998653211    11112333333334 799999999988766    45899999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|..++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~--------~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~  148 (327)
T cd05617          77 YVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER--------GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG  148 (327)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence            9999999998864 5799999999999999999999998        999999999999999999999999999864322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC--CCCh
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM--DPSF  371 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~--~~~~  371 (443)
                      ...    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||......  ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~ell~g----------~~pf~~~~~~~~~~~~  208 (327)
T cd05617         149 PGD----TTSTFCGTPNYIAPEILRGE------EYGFSVDWWALGVLMFEMMAG----------RSPFDIITDNPDMNTE  208 (327)
T ss_pred             CCC----ceecccCCcccCCHHHHCCC------CCCchheeehhHHHHHHHHhC----------CCCCCccCCCcccccH
Confidence            111    12345799999999999876      667899999999999999999          5566432211  1112


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      +.....+..  ....+|     ...+..+.+++.+||+.||++|+++
T Consensus       209 ~~~~~~~~~--~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         209 DYLFQVILE--KPIRIP-----RFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHHHHh--CCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCC
Confidence            222232221  122233     2355678999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.9e-39  Score=318.49  Aligned_cols=257  Identities=24%  Similarity=0.356  Sum_probs=188.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|++.+.||+|+||.||++..  +|..||||++.....   .......|+..+..++||||+++++++.....  ..
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            347899999999999999999987  588999998854321   12222356666667999999999998865432  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+.+ +|.+.+. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~--------~ivHrDlkp~NIl~~~~~~~kl~Dfg  168 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH-MELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFG  168 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEECCCCCEEEecCC
Confidence            357999999975 6776664 3588999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......     ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||.....
T Consensus       169 ~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~el~tg----------~~pf~~~~~  227 (359)
T cd07876         169 LARTACTNF-----MMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGELVKG----------SVIFQGTDH  227 (359)
T ss_pred             CccccccCc-----cCCCCcccCCCCCchhccCC------CCCcchhhHHHHHHHHHHHhC----------CCCCCCCCH
Confidence            997543221     12335789999999999776      677899999999999999999          555543211


Q ss_pred             CC-----------CChH-------HHHhhhhhcCCCCCCCC--------CC-------CCchhHHHHHHHHHHHhcCCcC
Q psy14889        367 MD-----------PSFD-------DMRKVICIDQQRPVLPN--------RW-------VSDSTLNAMTKVMKECWHQNAN  413 (443)
Q Consensus       367 ~~-----------~~~~-------~~~~~~~~~~~~~~~~~--------~~-------~~~~~~~~l~~li~~cl~~dP~  413 (443)
                      ..           +...       .......   .++..+.        .|       .....+..+.+|+.+||+.||+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  304 (359)
T cd07876         228 IDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE---NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPD  304 (359)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh---hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcc
Confidence            00           0000       0000000   1111110        00       0111346789999999999999


Q ss_pred             CCCcHHHHHHH
Q psy14889        414 VRLSALRVKKT  424 (443)
Q Consensus       414 ~Rps~~evl~~  424 (443)
                      +|||+.|+++.
T Consensus       305 ~R~t~~e~l~h  315 (359)
T cd07876         305 KRISVDEALRH  315 (359)
T ss_pred             cCCCHHHHhcC
Confidence            99999999884

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2.5e-39  Score=314.31  Aligned_cols=238  Identities=23%  Similarity=0.310  Sum_probs=182.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +|++.+.||+|+||.||+|+.  +|+.||+|++.....    .......|+..+..+ +|++|+++++++.+.    ..+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----DRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC----CEE
Confidence            467889999999999999987  588999998864321    111122333333334 457788888887665    358


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++.++..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~--------~ivHrDikp~Nill~~~~~ikL~Dfg~~  148 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR--------GIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHeEECCCCCEEEeccccc
Confidence            999999999999999865 6799999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...    
T Consensus       149 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~elltG----------~~pf~~~----  204 (323)
T cd05615         149 KEHMVDGV----TTRTFCGTPDYIAPEIIAYQ------PYGKSVDWWAYGVLLYEMLAG----------QPPFDGE----  204 (323)
T ss_pred             cccCCCCc----cccCccCCccccCHHHHcCC------CCCCccchhhhHHHHHHHHhC----------CCCCCCC----
Confidence            75432111    12334689999999999765      667899999999999999999          6777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                       ........+..  .....|     ...+.++.+++.+||+.||.+|++.
T Consensus       205 -~~~~~~~~i~~--~~~~~p-----~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         205 -DEDELFQSIME--HNVSYP-----KSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             -CHHHHHHHHHh--CCCCCC-----ccCCHHHHHHHHHHcccCHhhCCCC
Confidence             12222222221  122222     2355678999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.1e-39  Score=308.44  Aligned_cols=250  Identities=25%  Similarity=0.390  Sum_probs=191.9

Q ss_pred             ccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|.+.++||+|+||.||++..       ++..+|+|.+...... ......|+..+..++|+||+++++++....    
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----   80 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR----   80 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence            5788899999999999999964       2567899987543322 222345566666699999999999987663    


Q ss_pred             EEEeeecccCcccHHHHhccc----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRT----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      ..+++|||+++|+|.+++...                .+++..++.++.|++.||+|||+.        +++||||||+|
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--------~i~H~dlkp~n  152 (280)
T cd05092          81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL--------HFVHRDLATRN  152 (280)
T ss_pred             ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC--------CeecccccHhh
Confidence            479999999999999998642                478999999999999999999998        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      ||+++++.+||+|||++..........  ......+++.|+|||.+.+.      .++.++|||||||++|||++ |   
T Consensus       153 il~~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g---  221 (280)
T cd05092         153 CLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPIRWMPPESILYR------KFTTESDIWSFGVVLWEIFTYG---  221 (280)
T ss_pred             EEEcCCCCEEECCCCceeEcCCCceee--cCCCccccccccCHHHhccC------CcCchhhHHHHHHHHHHHHcCC---
Confidence            999999999999999987554321111  11223456789999998776      66789999999999999998 6   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                             ..||....     .......+. .......+     ..++..+.+++.+||+.||++||++.+|++.|+
T Consensus       222 -------~~p~~~~~-----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         222 -------KQPWYQLS-----NTEAIECIT-QGRELERP-----RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             -------CCCCccCC-----HHHHHHHHH-cCccCCCC-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence                   56665431     112222221 11122222     336678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.6e-39  Score=307.72  Aligned_cols=260  Identities=25%  Similarity=0.359  Sum_probs=197.2

Q ss_pred             ccccccceeeeecCeEEEEEEEC------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.|++.+.||+|+||.||+|.++      ++.||||.+......  ....+.|+..+..++||||+++++++.....  .
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~--~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG--R   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC--C
Confidence            46888899999999999999863      678999988655442  3334556666667999999999998866432  4


Q ss_pred             EEEeeecccCcccHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~--l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+++|||+++++|.+++....  +++..+..++.|++.||+|||+.        +++|+||||+||+++.++.+||+||
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~df  153 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ--------RYIHRDLAARNILVESEDLVKISDF  153 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHhEEEcCCCCEEEccc
Confidence            5799999999999999997644  99999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++............ .....++..|+|||.+.+.      .++.++||||||+++|||+||+.|          +....
T Consensus       154 g~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~el~tg~~p----------~~~~~  216 (284)
T cd05038         154 GLAKVLPEDKDYYYV-KEPGESPIFWYAPECLRTS------KFSSASDVWSFGVTLYELFTYGDP----------SQSPP  216 (284)
T ss_pred             ccccccccCCcceec-cCCCCCcccccCcHHHccC------CCCcccchHHHhhhhheeeccCCC----------ccccc
Confidence            999876532221111 1122455679999998765      566899999999999999999543          32211


Q ss_pred             CC----------CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        366 PM----------DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       366 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..          ......+...... ..+...     +..++.++.+++.+||+.||++|||+.||++.|+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         217 AEFLRMIGIAQGQMIVTRLLELLKE-GERLPR-----PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             chhccccccccccccHHHHHHHHHc-CCcCCC-----CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            10          0112222222221 111111     133567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.1e-39  Score=344.65  Aligned_cols=258  Identities=26%  Similarity=0.398  Sum_probs=194.0

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ...++|.+.+.||+|+||.||++..  .+..||+|.+......   ......|+..+..++|||||++++++.....  .
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~--~   87 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN--Q   87 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC--C
Confidence            3447899999999999999999998  5778999988643221   2223356666667999999999998865543  4


Q ss_pred             EEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-----
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-----  277 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-----  277 (443)
                      .+||||||+++|+|.++|..     ..+++..++.|+.||+.||.|||+... .....+||||||||+||||+.+     
T Consensus        88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~-~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKD-GPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccc-ccccCCceeccCcHHHeEeecCccccc
Confidence            68999999999999999864     469999999999999999999998510 0001269999999999999642     


Q ss_pred             ------------CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        278 ------------GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       278 ------------~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                                  ..+||+|||++..+.....     .....||+.|+|||++.+...    .++.++|||||||+||||+
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-----~~s~vGTp~YmAPEvL~ge~~----~~s~KSDVWSLG~ILYELL  237 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM-----AHSCVGTPYYWSPELLLHETK----SYDDKSDMWALGCIIYELC  237 (1021)
T ss_pred             cccccccccCCCCceEEccCCcccccccccc-----ccccCCCccccCHHHHhccCC----CCCchhHHHHHHHHHHHHH
Confidence                        3589999999976543221     133479999999999865321    4668999999999999999


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ||          ..||....    ....+...+.   ..+.++.    ...+.++.+||..||+.+|.+|||+.|++.
T Consensus       238 TG----------k~PF~~~~----~~~qli~~lk---~~p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        238 SG----------KTPFHKAN----NFSQLISELK---RGPDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HC----------CCCCCcCC----cHHHHHHHHh---cCCCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            99          67775421    2233322222   1222221    224567999999999999999999999984

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-39  Score=301.96  Aligned_cols=250  Identities=26%  Similarity=0.378  Sum_probs=195.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||++..  +++.||+|.+......      ....+.|+..+..++||||+++++++....    
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----   77 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE----   77 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence            5788999999999999999986  5899999987643211      112345666666799999999999987763    


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +|+|+||+|+||++++++.++|+|||
T Consensus        78 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~H~dl~p~nilv~~~~~~~l~dfg  149 (263)
T cd06625          78 TLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN--------MIVHRDIKGANILRDSAGNVKLGDFG  149 (263)
T ss_pred             eEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEeecc
Confidence            68999999999999998864 5689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......... .......|+..|+|||.+.+.      .++.++||||||+++|||++|          +.||.... 
T Consensus       150 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g----------~~p~~~~~-  211 (263)
T cd06625         150 ASKRLQTICSSG-TGMKSVTGTPYWMSPEVISGE------GYGRKADVWSVGCTVVEMLTE----------KPPWAEFE-  211 (263)
T ss_pred             cceecccccccc-ccccCCCcCccccCcceeccC------CCCchhhhHHHHHHHHHHHhC----------CCCccccc-
Confidence            987654322111 111234678899999999876      567899999999999999999          66765431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                         ......... .....+.++     ..++..+.+++.+||..+|++|||+.++++.
T Consensus       212 ---~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         212 ---AMAAIFKIA-TQPTNPQLP-----SHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ---hHHHHHHHh-ccCCCCCCC-----ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence               112222221 112222233     3356789999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3e-39  Score=305.02  Aligned_cols=253  Identities=26%  Similarity=0.399  Sum_probs=194.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CC---ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HG---ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~---~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+|++.+.||+|+||.||+|.+  ++   ..+|+|.+......  ....+.|+..+..++||||+++++++...    ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   79 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS----KP   79 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----Cc
Confidence            5788999999999999999986  22   36899987543221  22334566666668999999999998765    34


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++.+++.++.|++.||+|||+.        +++||||||+|||++.++.+||+|||
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~h~dlkp~nili~~~~~~~l~dfg  151 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM--------GYVHRDLAARNILVNSNLVCKVSDFG  151 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeehhhchhcEEECCCCeEEeCCCC
Confidence            7999999999999999965  4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      ++..+........ ......++..|+|||.+.+.      .++.++||||||+++||+++ |          ..||.+..
T Consensus       152 ~~~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~~l~ell~~g----------~~p~~~~~  214 (267)
T cd05066         152 LSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIAYR------KFTSASDVWSYGIVMWEVMSYG----------ERPYWEMS  214 (267)
T ss_pred             cccccccccceee-ecCCCccceeecCHhHhccC------ccCchhhhHHHHHHHHHHhcCC----------CCCcccCC
Confidence            9977654322111 11122345689999999765      66789999999999999886 7          66776542


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      .     ......+.. ..++..+     ..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       215 ~-----~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         215 N-----QDVIKAIEE-GYRLPAP-----MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             H-----HHHHHHHhC-CCcCCCC-----CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            1     222222221 1122111     23567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=3.4e-39  Score=304.91  Aligned_cols=254  Identities=27%  Similarity=0.408  Sum_probs=194.2

Q ss_pred             ccccccceeeeecCeEEEEEEEC--C---ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--G---ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +.|++.+.||+|+||.||+|.+.  +   ..||||.+......  ......|+..+..++||||+++++++....    .
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----~   79 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR----P   79 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC----c
Confidence            46888999999999999999873  3   35999987653221  223345666666699999999999987663    4


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++.+++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~--------g~~H~dl~p~nili~~~~~~kl~dfg  151 (269)
T cd05065          80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM--------NYVHRDLAARNILVNSNLVCKVSDFG  151 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccChheEEEcCCCcEEECCCc
Confidence            7999999999999999864  4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCC-CCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIP-PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       287 la~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      ++............. ......+..|+|||.+.+.      .++.++|||||||++||+++ |          ..||.+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~------~~~~~~DvwslG~~l~e~l~~g----------~~p~~~~  215 (269)
T cd05065         152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR------KFTSASDVWSYGIVMWEVMSYG----------ERPYWDM  215 (269)
T ss_pred             cccccccCccccccccccCCCcceeecCHhHhccC------cccchhhhhhhHHHHHHHhcCC----------CCCCCCC
Confidence            987654322211110 0111124579999998765      66789999999999999886 7          6677653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      .     .......+... .....+     ..++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus       216 ~-----~~~~~~~i~~~-~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         216 S-----NQDVINAIEQD-YRLPPP-----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             C-----HHHHHHHHHcC-CcCCCc-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            2     22333333222 111111     23567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.2e-39  Score=321.31  Aligned_cols=251  Identities=22%  Similarity=0.302  Sum_probs=189.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +++.||+|++.....    .......|+..+..++||||+++++.+.+.    ..+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~----~~~   76 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK----RNL   76 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CEE
Confidence            3688899999999999999988  588999999864321    111223455555568999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~--------givHrDLkp~NIli~~~~~vkL~DfG~~  148 (360)
T cd05627          77 YLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL--------GFIHRDIKPDNLLLDAKGHVKLSDFGLC  148 (360)
T ss_pred             EEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEccCCCHHHEEECCCCCEEEeeccCC
Confidence            999999999999999864 6789999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCc-------------------------------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHH
Q psy14889        289 VSYSQLSNK-------------------------------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL  337 (443)
Q Consensus       289 ~~~~~~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~  337 (443)
                      +.+......                               ........+||+.|+|||++.+.      .++.++|||||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~------~~~~~~DiwSl  222 (360)
T cd05627         149 TGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT------GYNKLCDWWSL  222 (360)
T ss_pred             cccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC------CCCCcceeccc
Confidence            754321100                               00001235799999999999776      67789999999


Q ss_pred             HHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       338 Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      ||++|||++|          ..||....+    ........ .......+|..   ...+.++.+++.+++ .||.+|++
T Consensus       223 Gvilyel~tG----------~~Pf~~~~~----~~~~~~i~-~~~~~~~~p~~---~~~s~~~~~li~~l~-~~p~~R~~  283 (360)
T cd05627         223 GVIMYEMLIG----------YPPFCSETP----QETYRKVM-NWKETLVFPPE---VPISEKAKDLILRFC-TDSENRIG  283 (360)
T ss_pred             cceeeecccC----------CCCCCCCCH----HHHHHHHH-cCCCceecCCC---CCCCHHHHHHHHHhc-cChhhcCC
Confidence            9999999999          677765321    12222222 11122223321   124567899999977 49999995


Q ss_pred             ---HHHHHH
Q psy14889        418 ---ALRVKK  423 (443)
Q Consensus       418 ---~~evl~  423 (443)
                         +.++++
T Consensus       284 ~~~~~ei~~  292 (360)
T cd05627         284 SNGVEEIKS  292 (360)
T ss_pred             CCCHHHHhc
Confidence               566654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1e-39  Score=316.84  Aligned_cols=234  Identities=26%  Similarity=0.359  Sum_probs=180.2

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHH-HHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|+.  +++.||+|++......    ......|.. .+..++||||+++++++.+.    ...++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~----~~~~lv~e   76 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA----EKLYFVLD   76 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC----CEEEEEEc
Confidence            4699999999999998  5889999998643211    111122222 23458999999999988766    45799999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|..++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  148 (321)
T cd05603          77 YVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL--------NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE  148 (321)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence            9999999988864 5689999999999999999999998        999999999999999999999999999865322


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~pf~~~-----~~~~  203 (321)
T cd05603         149 PEE----TTSTFCGTPEYLAPEVLRKE------PYDRTVDWWCLGAVLYEMLYG----------LPPFYSR-----DVSQ  203 (321)
T ss_pred             CCC----ccccccCCcccCCHHHhcCC------CCCCcCcccccchhhhhhhcC----------CCCCCCC-----CHHH
Confidence            111    12345789999999998765      667899999999999999999          6777653     2223


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +...+..  ....++     ...+..+.+++.+||+.||.+||++.
T Consensus       204 ~~~~i~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         204 MYDNILH--KPLQLP-----GGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHhc--CCCCCC-----CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            3332221  122222     23456799999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5.4e-39  Score=300.85  Aligned_cols=245  Identities=27%  Similarity=0.396  Sum_probs=193.6

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||+|..  +++.|++|.+.....   .......|+..+..++||||+++++++...    ...++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~l   76 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK----GKLNI   76 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC----CEEEE
Confidence            477889999999999999988  688999998764321   122233456666669999999999998776    45799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++++|.+++..   ..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~--------~i~h~dl~~~nili~~~~~~~l~df~~~  148 (256)
T cd08529          77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK--------KILHRDIKSLNLFLDAYDNVKIGDLGVA  148 (256)
T ss_pred             EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCcceEEEeCCCCEEEcccccc
Confidence            9999999999999864   4689999999999999999999988        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+......    .....|+..|+|||++.+.      .++.++|+||||+++|||++|          ..||....   
T Consensus       149 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~---  205 (256)
T cd08529         149 KLLSDNTNF----ANTIVGTPYYLSPELCEDK------PYNEKSDVWALGVVLYECCTG----------KHPFDANN---  205 (256)
T ss_pred             eeccCccch----hhccccCccccCHHHhcCC------CCCCccchHHHHHHHHHHHhC----------CCCCCCCC---
Confidence            766543221    1234688899999999876      566899999999999999999          66775431   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        .......+. ....+.++     ...+..+.+++.+||+.+|++||++.++++.
T Consensus       206 --~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         206 --QGALILKII-RGVFPPVS-----QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             --HHHHHHHHH-cCCCCCCc-----cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence              222222221 12222222     2356789999999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.5e-39  Score=304.85  Aligned_cols=255  Identities=23%  Similarity=0.377  Sum_probs=183.7

Q ss_pred             ceeeeecCeEEEEEEE-C---CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVW-H---GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-~---~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||+|.. +   ...+|+|.+.......  .....|+..+..++||||+++++.+....    .+++||||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~----~~~lv~e~   76 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI----PYLLVLEF   76 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC----ceEEEEEe
Confidence            3589999999999975 3   3468888765432221  12234555566689999999999987763    47999999


Q ss_pred             cCcccHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        216 HSFGSLYDHLNRT------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       216 ~~~gsL~~~l~~~------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +++|+|.+++...      ..++..++.++.||+.||+|||+.        +|+||||||+|||+++++.+||+|||++.
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nill~~~~~~kl~dfg~~~  148 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA--------DFIHSDLALRNCQLTADLSVKIGDYGLAL  148 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc--------CEecccccHhheEecCCCcEEEecccccc
Confidence            9999999998642      246778899999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccc-cCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN-MDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........  ......++..|+|||++..... .....++.++|||||||++|||+++.         ..||....   
T Consensus       149 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~---------~~p~~~~~---  214 (269)
T cd05042         149 EQYPEDYYI--TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAA---------DQPYPDLS---  214 (269)
T ss_pred             ccccchhee--ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCC---------CCCCCcCC---
Confidence            543221111  1123346678999999864311 01125568999999999999999941         55665431   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                       ..+.....+.  .....++........+..+.+++..|| .||++|||+++|++.|.
T Consensus       215 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         215 -DEQVLKQVVR--EQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             -HHHHHHHHhh--ccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence             1122222222  222223332333456678899999999 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-39  Score=302.94  Aligned_cols=251  Identities=25%  Similarity=0.415  Sum_probs=196.8

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|.+.+.||+|+||.||+|.. ++..||||.+............|+..+..++|+||+++++++...    ...++||
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~   80 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE----EPIYIVT   80 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC----CceEEEE
Confidence            46899999999999999999987 457899998875544333445566666679999999999998765    3479999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++++|.+++..   ..+++..+..++.|++.||.|||+.        +++|+||||+||++++++.+||+|||++..
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~--------~i~h~di~p~nili~~~~~~~l~d~g~~~~  152 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR--------NYIHRDLAARNILVGENLVCKIADFGLARL  152 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCcchheEEEcCCCCEEECcccccee
Confidence            99999999999965   3589999999999999999999998        999999999999999999999999999876


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      +......   ......++..|+|||.+.+.      .++.++||||||+++||+++ |          ..||.+..    
T Consensus       153 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~t~g----------~~p~~~~~----  209 (261)
T cd05034         153 IEDDEYT---AREGAKFPIKWTAPEAANYG------RFTIKSDVWSFGILLTEIVTYG----------RVPYPGMT----  209 (261)
T ss_pred             ccchhhh---hhhccCCCccccCHHHhccC------CcCchhHHHHHHHHHHHHHhCC----------CCCCCCCC----
Confidence            6532111   11122345689999998865      66789999999999999998 7          66775431    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                       .......+.. ......+     ...+.++.+++.+||+.||++||+++++.+.|+.
T Consensus       210 -~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         210 -NREVLEQVER-GYRMPRP-----PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             -HHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence             1222222211 1122222     2346789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=5e-39  Score=302.32  Aligned_cols=251  Identities=22%  Similarity=0.393  Sum_probs=195.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..++|++.+.||+|+||.||++.+ .+..+|+|.+............|+..+..++|+||+++++.+...     ..+++
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~v   78 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYII   78 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCC-----CeEEE
Confidence            347899999999999999999987 567799998765433222334455556669999999999987662     36899


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++..   ..+++.+++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~--------~i~H~dl~p~ni~i~~~~~~~l~d~~~~~  150 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--------NYIHRDLRAANILVSASLVCKIADFGLAR  150 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC--------CccccccCcceEEEcCCCcEEECCCccee
Confidence            999999999999964   3578899999999999999999988        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .+......   ......++..|+|||++...      .++.++|+||||+++||++| |          ..||...    
T Consensus       151 ~~~~~~~~---~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~t~g----------~~p~~~~----  207 (260)
T cd05073         151 VIEDNEYT---AREGAKFPIKWTAPEAINFG------SFTIKSDVWSFGILLMEIVTYG----------RIPYPGM----  207 (260)
T ss_pred             eccCCCcc---cccCCcccccccCHhHhccC------CcCccccchHHHHHHHHHHhcC----------CCCCCCC----
Confidence            65432211   11223456789999998765      56789999999999999999 6          6677653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                       ........+.. ......+     ...+.++.+++.+||+.||++||++.++++.|+.
T Consensus       208 -~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         208 -SNPEVIRALER-GYRMPRP-----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             -CHHHHHHHHhC-CCCCCCc-----ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             12222222221 1111111     3356789999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-39  Score=314.04  Aligned_cols=256  Identities=22%  Similarity=0.250  Sum_probs=189.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+++.  +++.||+|++.....    .......|+..+..++|+||+++++++.+.    ..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~   76 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE----NNL   76 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC----CeE
Confidence            4688999999999999999987  588999999864221    111122344445558999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+++|+|.+++.+  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nill~~~~~~kl~Dfg~  148 (331)
T cd05597          77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL--------GYVHRDIKPDNVLLDKNGHIRLADFGS  148 (331)
T ss_pred             EEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEECCCCHHHEEECCCCCEEEEECCc
Confidence            999999999999999964  5689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +..+......   ......||+.|+|||++....... ..++.++|||||||++|||++|          ..||...   
T Consensus       149 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DiwslG~~l~el~~g----------~~Pf~~~---  211 (331)
T cd05597         149 CLRLLADGTV---QSNVAVGTPDYISPEILQAMEDGK-GRYGPECDWWSLGVCMYEMLYG----------ETPFYAE---  211 (331)
T ss_pred             eeecCCCCCc---cccceeccccccCHHHHhhccccc-cCCCCcceeehhhhHHHHHhhC----------CCCCCCC---
Confidence            8765432211   112246899999999987421110 1456799999999999999999          7777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcC--CCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN--VRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~Rps~~evl~~  424 (443)
                        ...+....+........++..  ....+..+.+++++|+..+++  .||++.++++.
T Consensus       212 --~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         212 --SLVETYGKIMNHKEHFQFPPD--VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             --CHHHHHHHHHcCCCcccCCCc--cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence              112222222222222222221  123567899999998865443  37899988875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.4e-39  Score=305.52  Aligned_cols=252  Identities=27%  Similarity=0.408  Sum_probs=191.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|.+........ ....|+..+..++||||+++++.+...    ..+++|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~----~~~~lv   84 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR----DKLWIC   84 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----CEEEEE
Confidence            5899999999999999999987  588999998865433221 223455666668999999999998766    457999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||+++++|.+++.. ..+++.+++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++...
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK--------GKMHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence            999999999998854 5799999999999999999999998        9999999999999999999999999998765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....    ......|+..|+|||++.....   ..++.++|||||||++|||++|          ..||....+.    
T Consensus       157 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~---~~~~~~~DvwSlG~il~~l~~~----------~~p~~~~~~~----  215 (267)
T cd06645         157 TATIA----KRKSFIGTPYWMAPEVAAVERK---GGYNQLCDIWAVGITAIELAEL----------QPPMFDLHPM----  215 (267)
T ss_pred             cCccc----ccccccCcccccChhhhccccC---CCCCchhhhHHHHHHHHHHhcC----------CCCcccccch----
Confidence            43211    1234478999999999752211   1466899999999999999999          5666543211    


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .............+...   .....+..+.+++.+||+.||++|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         216 RALFLMTKSNFQPPKLK---DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             hhHHhhhccCCCCCccc---ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            11111111111111111   11124567999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=6.1e-39  Score=303.37  Aligned_cols=254  Identities=23%  Similarity=0.419  Sum_probs=196.8

Q ss_pred             ccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|.+.+.||+|+||.||+|.+.     ...||||.......  .......|+..+..++||||+++++++.+.     .
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~   80 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-----P   80 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-----C
Confidence            56889999999999999999873     23689997754432  122334566667779999999999988653     2


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++.+  ..+++..++.++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~~~H~dl~p~nili~~~~~~~l~d~g  152 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK--------RFVHRDIAARNVLVSSPDCVKLGDFG  152 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccccChheEEEecCCCeEEccCc
Confidence            5899999999999999964  3589999999999999999999988        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      +++.........   .....++..|+|||.+...      .++.++||||||+++||+++ |          ..||....
T Consensus       153 ~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g----------~~pf~~~~  213 (270)
T cd05056         153 LSRYLEDESYYK---ASKGKLPIKWMAPESINFR------RFTSASDVWMFGVCMWEILMLG----------VKPFQGVK  213 (270)
T ss_pred             eeeeccccccee---cCCCCccccccChhhhccC------CCCchhhhHHHHHHHHHHHHcC----------CCCCCCCC
Confidence            987665432111   1122345689999988765      56789999999999999986 7          66775532


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           .......+. ...+...+     ..++..+.+++.+||..+|++|||+.++++.|+++.+++
T Consensus       214 -----~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         214 -----NNDVIGRIE-NGERLPMP-----PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             -----HHHHHHHHH-cCCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence                 112222221 12222222     346678999999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.1e-39  Score=304.06  Aligned_cols=257  Identities=23%  Similarity=0.433  Sum_probs=199.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|++.+.||+|+||.||+|.+  +|.    .+|+|.+......  ....+.|+..+..++||||+++++++...     
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----   81 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSS-----   81 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence            5788999999999999999987  333    5899977544322  22334566666779999999999998762     


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++|+||+++|+|.+++.+  ..+++..++.++.|++.||+|||+.        +++||||||+||++++++.+||+||
T Consensus        82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~i~H~di~p~nil~~~~~~~kL~df  153 (279)
T cd05057          82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK--------RLVHRDLAARNVLVKTPQHVKITDF  153 (279)
T ss_pred             ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEecccCcceEEEcCCCeEEECCC
Confidence            46899999999999999965  4689999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++..........  .....++..|+|||.+...      .++.++||||||+++||+++ |          ..||...
T Consensus       154 g~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~el~~~g----------~~p~~~~  215 (279)
T cd05057         154 GLAKLLDVDEKEYH--AEGGKVPIKWMALESILHR------IYTHKSDVWSYGVTVWELMTFG----------AKPYEGI  215 (279)
T ss_pred             cccccccCccccee--cCCCcccccccCHHHhhcC------CcCchhhHHHHHHHHHHHhcCC----------CCCCCCC
Confidence            99977653322111  1122345689999988755      56689999999999999998 7          6677653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                           ...++...+.. ......+     ..++..+.+++.+||..||++||++.++++.|.++.+...+
T Consensus       216 -----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~  274 (279)
T cd05057         216 -----PAVEIPDLLEK-GERLPQP-----PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQR  274 (279)
T ss_pred             -----CHHHHHHHHhC-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcc
Confidence                 22334443332 2222222     22456789999999999999999999999999999876544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=4.2e-39  Score=301.77  Aligned_cols=245  Identities=25%  Similarity=0.419  Sum_probs=191.9

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +|++.+.||+|+||.||++..  ++..+|+|.+.....  .......|+..+..++|+||+++++.+.+.    ..++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv   76 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD----GHLYIV   76 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC----CEEEEE
Confidence            478889999999999999987  588999998754322  112223455556669999999999998766    468999


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++..   ..+++..++.++.|++.||.|||+.        +|+|+||||+||++++++.++|+|||++.
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~--------~i~H~dl~p~nili~~~~~~~l~dfg~~~  148 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK--------RVLHRDIKSKNIFLTQNGKVKLGDFGSAR  148 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCCcceEEECCCCcEEEcccCcce
Confidence            999999999998853   4588999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....|+..|+|||++.+.      .++.++|+||||+++|+|++|          ..||...     
T Consensus       149 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~------~~~~~~Dv~slG~i~~~l~~g----------~~p~~~~-----  203 (255)
T cd08219         149 LLTSPGAY----ACTYVGTPYYVPPEIWENM------PYNNKSDIWSLGCILYELCTL----------KHPFQAN-----  203 (255)
T ss_pred             eecccccc----cccccCCccccCHHHHccC------CcCchhhhhhhchhheehhhc----------cCCCCCC-----
Confidence            65432211    1234688899999998765      567899999999999999999          6677542     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ........+. .......+     ...+..+.+++.+||+.||++|||+.+++..
T Consensus       204 ~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         204 SWKNLILKVC-QGSYKPLP-----SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CHHHHHHHHh-cCCCCCCC-----cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            1222222222 12222233     2355679999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=5.1e-39  Score=305.55  Aligned_cols=247  Identities=23%  Similarity=0.381  Sum_probs=188.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|++.......  .....|+..+..++||||+++++++...    ...++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l   76 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE----NRISI   76 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC----CEEEE
Confidence            3678889999999999999987  68899999886432211  1223455556668999999999998876    45789


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++|+|..+   ..+++..+..++.|++.||.|||+.        +|+|+||||+|||++.++.+||+|||++..+
T Consensus        77 v~e~~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~  145 (279)
T cd06619          77 CTEFMDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSL--------KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL  145 (279)
T ss_pred             EEecCCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHC--------CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence            9999999999765   3478889999999999999999998        9999999999999999999999999999765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC-
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS-  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~-  370 (443)
                      ....      .....||..|+|||.+.+.      .++.++||||||+++|||++|          ..||......... 
T Consensus       146 ~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~~l~~g----------~~pf~~~~~~~~~~  203 (279)
T cd06619         146 VNSI------AKTYVGTNAYMAPERISGE------QYGIHSDVWSLGISFMELALG----------RFPYPQIQKNQGSL  203 (279)
T ss_pred             cccc------ccCCCCChhhcCceeecCC------CCCCcchHHHHHHHHHHHHhC----------CCCchhhccccccc
Confidence            4321      1334789999999999876      667899999999999999999          5565443211111 


Q ss_pred             -hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        371 -FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       371 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       .......+. ....+..+    ....+.++.+++.+||+.||++||+++++++.
T Consensus       204 ~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         204 MPLQLLQCIV-DEDPPVLP----VGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             chHHHHHHHh-ccCCCCCC----CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence             111111111 11122222    12345679999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=5.3e-39  Score=303.69  Aligned_cols=254  Identities=24%  Similarity=0.375  Sum_probs=184.0

Q ss_pred             ceeeeecCeEEEEEEEC----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        142 ECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +.||+|+||.||+|.+.    +..+|+|.+......  ......|+..+..++||||+++++++.+..    ..++||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~   76 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT----PYLLVMEF   76 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC----CcEEEEEC
Confidence            35899999999999863    356899987554322  123344666666799999999999987663    46899999


Q ss_pred             cCcccHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        216 HSFGSLYDHLNR------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       216 ~~~gsL~~~l~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +++|+|.++++.      ...++..+..++.|++.||+|||+.        +++||||||+||+++.++.+||+|||+++
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~i~H~dlkp~nil~~~~~~~kL~dfg~~~  148 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN--------NFIHSDLALRNCLLTADLTVKIGDYGLSH  148 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC--------CEeccccCcceEEEcCCCcEEECCccccc
Confidence            999999999863      2356778889999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCccccccccccccc-CcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-DCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ........  .......|+..|+|||++...... ....++.++||||||+++|||++ |          ..||..... 
T Consensus       149 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g----------~~p~~~~~~-  215 (269)
T cd05087         149 NKYKEDYY--VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELG----------SQPYRHLSD-  215 (269)
T ss_pred             cccCccee--ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCC----------CCCCCCCCh-
Confidence            54322111  112234577889999998643110 01145689999999999999996 8          667754321 


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                         .+.....+.  ......+........+..+.+++..|| .+|++|||++||+..|+
T Consensus       216 ---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         216 ---EQVLTYTVR--EQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             ---HHHHHHHhh--cccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence               111111111  112222222222335667899999999 68999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=4.6e-39  Score=304.34  Aligned_cols=244  Identities=25%  Similarity=0.423  Sum_probs=183.7

Q ss_pred             ceeeeecCeEEEEEEEC--Cc--eeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH--GE--NVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~--~~--~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|...  +.  .+|+|.+......  ......|+..+..+ +||||+++++++....    ..++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----YLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC----CceEEEE
Confidence            36899999999999873  33  4688877542211  12223455555557 8999999999987663    4799999


Q ss_pred             ccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        215 YHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       215 ~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      |+++|+|.+++...                 .+++.++..++.|++.||+|||+.        +++||||||+|||++++
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~--------~i~H~dikp~nili~~~  148 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--------QFIHRDLAARNILVGEN  148 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccccceEEEcCC
Confidence            99999999998542                 378999999999999999999998        99999999999999999


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEE  356 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~  356 (443)
                      +.+||+|||++........     ......+..|+|||++...      .++.++||||||+++|||++ |         
T Consensus       149 ~~~kl~dfgl~~~~~~~~~-----~~~~~~~~~y~apE~~~~~------~~~~~~Di~slG~il~el~~~g---------  208 (270)
T cd05047         149 YVAKIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYS------VYTTNSDVWSYGVLLWEIVSLG---------  208 (270)
T ss_pred             CeEEECCCCCccccchhhh-----ccCCCCccccCChHHHccC------CCCchhhHHHHHHHHHHHHcCC---------
Confidence            9999999999853221110     1112335679999998765      66789999999999999997 7         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                       ..||.+.     ........+.. ......+     ..++.++.+++.+||+.||.+|||+.++++.|+++.
T Consensus       209 -~~pf~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         209 -GTPYCGM-----TCAELYEKLPQ-GYRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             -CCCcccc-----CHHHHHHHHhC-CCCCCCC-----CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence             6677543     12222222211 1122222     235567999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=3.5e-39  Score=308.04  Aligned_cols=252  Identities=23%  Similarity=0.371  Sum_probs=193.4

Q ss_pred             hccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||++..       ++..||+|++......  ....+.|+..+..++||||+++++++....  
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~--   81 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK--   81 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence            36799999999999999999986       3578999988654322  122345666666799999999999987764  


Q ss_pred             ccEEEeeecccCcccHHHHhcc-----------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCe
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-----------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAI  262 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~i  262 (443)
                        ..++++||+++|+|.+++..                       ..+++..++.++.|++.||.|||+.        ++
T Consensus        82 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~--------~i  151 (288)
T cd05050          82 --PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER--------KF  151 (288)
T ss_pred             --ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--------Ce
Confidence              36999999999999999853                       1367888999999999999999998        99


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHH
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW  342 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~  342 (443)
                      +||||||+||+++.++.+||+|||++..........  ......++..|+|||.+.+.      .++.++|||||||++|
T Consensus       152 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~  223 (288)
T cd05050         152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK--ASENDAIPIRWMPPESIFYN------RYTTESDVWAYGVVLW  223 (288)
T ss_pred             ecccccHhheEecCCCceEECccccceecccCcccc--ccCCCccChhhcCHHHHhcC------CCCchhHHHHHHHHHH
Confidence            999999999999999999999999987554322111  11122346679999998765      6678999999999999


Q ss_pred             HHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        343 EVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       343 ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      ||++ |          ..||.+.     ...+....+.. ......+     ..++.++.+++.+||+.||++|||+.|+
T Consensus       224 el~~~~----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~el  282 (288)
T cd05050         224 EIFSYG----------MQPYYGM-----AHEEVIYYVRD-GNVLSCP-----DNCPLELYNLMRLCWSKLPSDRPSFASI  282 (288)
T ss_pred             HHHhCC----------CCCCCCC-----CHHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence            9997 5          5566543     12222222221 1111112     2356789999999999999999999999


Q ss_pred             HHHHHH
Q psy14889        422 KKTLIK  427 (443)
Q Consensus       422 l~~L~~  427 (443)
                      ++.|++
T Consensus       283 ~~~l~~  288 (288)
T cd05050         283 NRILQR  288 (288)
T ss_pred             HHHhhC
Confidence            999873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4.2e-39  Score=316.90  Aligned_cols=260  Identities=22%  Similarity=0.284  Sum_probs=188.0

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      ..++|++.+.||+|+||.||++..  .++.||||.+......   ......|+..+..++||||+++++++.....  ..
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            347899999999999999999987  5889999988643221   1222345666666999999999998764432  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDikp~Nill~~~~~~kl~Dfg  164 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFG  164 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCChHHEEECCCCCEEEeeCc
Confidence            357999999975 7777764 3588999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......     ......||..|+|||++.+.      .++.++|||||||++|||++|          ..||.+...
T Consensus       165 ~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~pf~~~~~  223 (355)
T cd07874         165 LARTAGTSF-----MMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRH----------KILFPGRDY  223 (355)
T ss_pred             ccccCCCcc-----ccCCccccCCccCHHHHcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCH
Confidence            997654321     12345789999999999765      667899999999999999999          445543210


Q ss_pred             CCC-----------Ch-------HHHHhhhhhcCC--CCCCC----CC------CCCchhHHHHHHHHHHHhcCCcCCCC
Q psy14889        367 MDP-----------SF-------DDMRKVICIDQQ--RPVLP----NR------WVSDSTLNAMTKVMKECWHQNANVRL  416 (443)
Q Consensus       367 ~~~-----------~~-------~~~~~~~~~~~~--~~~~~----~~------~~~~~~~~~l~~li~~cl~~dP~~Rp  416 (443)
                      ...           ..       ............  ...++    ..      ......+..+.+|+.+||+.||++||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp  303 (355)
T cd07874         224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI  303 (355)
T ss_pred             HHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcC
Confidence            000           00       000000000000  00000    00      01112345789999999999999999


Q ss_pred             cHHHHHHH
Q psy14889        417 SALRVKKT  424 (443)
Q Consensus       417 s~~evl~~  424 (443)
                      |+.|+++.
T Consensus       304 s~~ell~h  311 (355)
T cd07874         304 SVDEALQH  311 (355)
T ss_pred             CHHHHhcC
Confidence            99999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.5e-39  Score=314.47  Aligned_cols=256  Identities=21%  Similarity=0.251  Sum_probs=190.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+++.  +++.+|+|++.....    .......|+..+..++|+||+++++.+.+.    ..+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~   76 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE----NNL   76 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC----CEE
Confidence            3688999999999999999998  467899998854211    111123344455558999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+++|+|.+++++  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        77 ~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~--------~iiHrDlkp~Nili~~~~~~kL~DfG~  148 (332)
T cd05623          77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL--------HYVHRDIKPDNILMDMNGHIRLADFGS  148 (332)
T ss_pred             EEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCHHHEEECCCCCEEEeecch
Confidence            999999999999999965  5689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +..+......   ......||+.|+|||++....... ..++.++|||||||++|||++|          ..||...   
T Consensus       149 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DvwSlGvil~ell~g----------~~Pf~~~---  211 (332)
T cd05623         149 CLKLMEDGTV---QSSVAVGTPDYISPEILQAMEDGK-GKYGPECDWWSLGVCMYEMLYG----------ETPFYAE---  211 (332)
T ss_pred             heecccCCcc---eecccccCccccCHHHHhccccCC-CCCCCcCCEEeeHHHHHHHhcC----------CCCCCCC---
Confidence            8765432211   112347999999999986421110 1567899999999999999999          7777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                        ........+.....+..+|..  ...++.++.+|+++|+..+++.  |+++.++++.
T Consensus       212 --~~~~~~~~i~~~~~~~~~p~~--~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         212 --SLVETYGKIMNHKERFQFPAQ--VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             --CHHHHHHHHhCCCccccCCCc--cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence              222222222222222223321  1335678999999998655444  6889998765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=3.3e-39  Score=309.56  Aligned_cols=260  Identities=27%  Similarity=0.380  Sum_probs=190.9

Q ss_pred             ccccccceeeeecCeEEEEEEEC------------------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH------------------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGY  195 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~------------------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l  195 (443)
                      ++|++.+.||+|+||.||++.+.                  +..||+|++......  ......|+..+..++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            67999999999999999998542                  336899988643222  1223456666667999999999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhccc------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeE
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIA  263 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~ii  263 (443)
                      ++++....    ..++||||+++|+|.+++...            .+++.++..++.|++.||+|||+.        +++
T Consensus        85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~--------~i~  152 (296)
T cd05095          85 LAVCITSD----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL--------NFV  152 (296)
T ss_pred             EEEEecCC----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC--------Cee
Confidence            99987764    369999999999999998642            367788999999999999999998        999


Q ss_pred             EeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       264 HrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      |+||||+|||++.++.+||+|||+++.+.......  ......++..|+|||....+      .++.++|||||||++||
T Consensus       153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~------~~~~~~DiwSlG~~l~e  224 (296)
T cd05095         153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR--IQGRAVLPIRWMSWESILLG------KFTTASDVWAFGVTLWE  224 (296)
T ss_pred             cccCChheEEEcCCCCEEeccCcccccccCCccee--ccCcCcCccccCCHHHHhcC------CccchhhhhHHHHHHHH
Confidence            99999999999999999999999997654322111  11222446789999987765      66789999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |+++..        ..||....... ..................+.   +..++..+.+++.+||+.||++|||+.+|++
T Consensus       225 l~~~~~--------~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         225 ILTLCK--------EQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPK---PALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHhCC--------CCCccccChHH-HHHHHHHHHhhccccccCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            998421        56665432111 00011111111111111111   1335678999999999999999999999999


Q ss_pred             HHHH
Q psy14889        424 TLIK  427 (443)
Q Consensus       424 ~L~~  427 (443)
                      .|++
T Consensus       293 ~l~~  296 (296)
T cd05095         293 TLLE  296 (296)
T ss_pred             HHhC
Confidence            8863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=4.3e-39  Score=301.65  Aligned_cols=244  Identities=27%  Similarity=0.483  Sum_probs=192.2

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||++..+++.||+|....... ......|+..+..++||||+++++++...     ..+++|||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~-~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~v~e~   79 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVT-AQAFLEETAVMTKLHHKNLVRLLGVILHN-----GLYIVMEL   79 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcch-HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-----CcEEEEEC
Confidence            5789999999999999999999999999998854322 12223455555669999999999997653     25899999


Q ss_pred             cCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++|+|.+++..   ..+++..++.++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++....
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK--------KLVHRDLAARNILVSEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccccCcceEEEcCCCcEEECCCccceecc
Confidence            999999999964   3488999999999999999999988        99999999999999999999999999986543


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ...       .....+..|+|||.+.+.      .++.++|+||||+++|||++ |          ..||...     ..
T Consensus       152 ~~~-------~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~~l~el~~~g----------~~p~~~~-----~~  203 (254)
T cd05083         152 MGV-------DNSKLPVKWTAPEALKHK------KFSSKSDVWSYGVLLWEVFSYG----------RAPYPKM-----SL  203 (254)
T ss_pred             ccC-------CCCCCCceecCHHHhccC------CcCchhhHHHHHHHHHHHHhCC----------CCCCccC-----CH
Confidence            211       112345679999998765      66789999999999999998 6          5676553     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      ......+.. ..++..+     ..++..+.+++.+||+.+|++||++.++++.|++
T Consensus       204 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         204 KEVKECVEK-GYRMEPP-----EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHhC-CCCCCCC-----CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            333333322 1222222     3356789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.8e-39  Score=305.84  Aligned_cols=253  Identities=29%  Similarity=0.365  Sum_probs=184.9

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-----chHHHHHHHH-HHhccCCCceeeeeeccccCC-ccc
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-----SWSRETEIYS-TVLLRHENILGYIGSDMTSRN-SCT  207 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-----~~~~e~ei~~-~~~l~H~nIv~l~g~~~~~~~-~~~  207 (443)
                      +|++.+.||+|+||.||+|..  +++.||+|.+......     ....|.++.. +..++||||+++++++..... ...
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            478889999999999999988  5889999988643211     2223433332 223589999999998765322 224


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      .++++|||+. ++|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~dikp~Nili~~~~~~kl~d  151 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN--------CIVHRDLKPENILVTSGGQVKLAD  151 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECCCCCEEECc
Confidence            5899999998 489888864   3589999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.......     .....||..|+|||++.+.      .++.++|||||||++|||++|          ..||...
T Consensus       152 fg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~~l~~l~~g----------~~~f~~~  210 (288)
T cd07863         152 FGLARIYSCQMA-----LTPVVVTLWYRAPEVLLQS------TYATPVDMWSVGCIFAEMFRR----------KPLFCGN  210 (288)
T ss_pred             cCccccccCccc-----CCCccccccccCchHhhCC------CCCCcchhhhHHHHHHHHHhC----------CcCcCCC
Confidence            999976543211     1334688999999999765      667899999999999999999          4444332


Q ss_pred             CCCCCChHHHHhhhhhcC-----------------CCCCCCC--CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQ-----------------QRPVLPN--RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .    ..+.+.+......                 ..+..+.  .......+..+.+++.+||+.||++|||+.|++.
T Consensus       211 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         211 S----EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             C----HHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1    1111111111000                 0000000  0011235567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5.3e-39  Score=305.74  Aligned_cols=258  Identities=27%  Similarity=0.433  Sum_probs=193.4

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCC--ccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~--~~~  207 (443)
                      ...+.|++.+.||+|+||.||+|..  +++.+|+|++..........+.|+..+..+ +|+||+++++++.....  ...
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            3457899999999999999999998  578999998865433333334455554445 79999999999864321  225


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      .++++|||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+|+||||+||++++++.++|+|
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--------~ivH~dl~~~nili~~~~~~~l~d  164 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH--------KVIHRDIKGQNVLLTENAEVKLVD  164 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEee
Confidence            68999999999999999864   4588899999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++........    ......|+..|+|||.+...... ...++.++|||||||++|||++|          ..||...
T Consensus       165 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~l~~~~~~-~~~~~~~~DvwslG~~l~el~~g----------~~p~~~~  229 (282)
T cd06636         165 FGVSAQLDRTVG----RRNTFIGTPYWMAPEVIACDENP-DATYDYRSDIWSLGITAIEMAEG----------APPLCDM  229 (282)
T ss_pred             Ccchhhhhcccc----CCCcccccccccCHhhcCcccCc-CcCCCcccchhHHHHHHHHHHhC----------CCCcccc
Confidence            999875542211    12335688999999998642111 11566799999999999999999          5666543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+    ........  ....+.    .....++..+.++|.+||+.||.+|||+.|+++
T Consensus       230 ~~----~~~~~~~~--~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         230 HP----MRALFLIP--RNPPPK----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CH----HhhhhhHh--hCCCCC----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            21    11111111  111111    112345678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-39  Score=317.20  Aligned_cols=257  Identities=21%  Similarity=0.313  Sum_probs=190.6

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--c
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--S  205 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~  205 (443)
                      .+.++|++.+.||+|+||.||+|..  +++.||||++......   ......|+..+..++||||+++++++.....  .
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            4457899999999999999999987  5789999988643221   1122346666777999999999998764321  2


Q ss_pred             ccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ....++++|++ +++|.+++....+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrdikp~Nil~~~~~~~kl~Df  162 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA--------GIIHRDLKPSNVAVNEDCELRILDF  162 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecccCChhhEEECCCCCEEEcCC
Confidence            24578999988 67999998888899999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.....       .....||..|+|||++.+..     .++.++|||||||++|||++|          ..||....
T Consensus       163 g~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g----------~~pf~~~~  220 (343)
T cd07878         163 GLARQADDE-------MTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLKG----------KALFPGND  220 (343)
T ss_pred             ccceecCCC-------cCCccccccccCchHhcCCc-----cCCchhhhHhHHHHHHHHHHC----------CCCCCCCC
Confidence            999765432       13347899999999987631     466899999999999999999          55554321


Q ss_pred             CCCCChHHHHhhhhhc--------------------CCCCCCCCCC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        366 PMDPSFDDMRKVICID--------------------QQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                          ..+.+.......                    ...+..+...   ........+.+|+.+||+.||++|||+.|++
T Consensus       221 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell  296 (343)
T cd07878         221 ----YIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL  296 (343)
T ss_pred             ----HHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence                011111110000                    0001111000   0011334678999999999999999999999


Q ss_pred             HH
Q psy14889        423 KT  424 (443)
Q Consensus       423 ~~  424 (443)
                      +.
T Consensus       297 ~h  298 (343)
T cd07878         297 AH  298 (343)
T ss_pred             cC
Confidence            64

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=4.5e-39  Score=306.74  Aligned_cols=260  Identities=26%  Similarity=0.415  Sum_probs=192.9

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccC-CcccE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSR-NSCTQ  208 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~-~~~~~  208 (443)
                      ...++|++.+.||+|+||.||++..  +++.+|+|++..........+.|+..+..+ +||||+++++++.... .....
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            3457899999999999999999987  578999998755333222333455555556 7999999999875332 12246


Q ss_pred             EEeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        209 LWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                      +++||||+++|+|.+++.     ...+++..+..++.|++.||.|||+.        +++||||||+||+++.++.+||+
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN--------KTIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC--------CccccCCCHHhEEECCCCCEEEc
Confidence            899999999999998874     24688999999999999999999998        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+++........    .....|+..|+|||++....... ..++.++|||||||++|||++|          +.||..
T Consensus       167 dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Dv~slGvi~~el~~g----------~~p~~~  231 (286)
T cd06638         167 DFGVSAQLTSTRLR----RNTSVGTPFWMAPEVIACEQQLD-STYDARCDVWSLGITAIELGDG----------DPPLAD  231 (286)
T ss_pred             cCCceeecccCCCc----cccccCCCcccChhhhchhhhcc-ccccchhhhhhHHHHHHHHhcC----------CCCCCC
Confidence            99998765432211    12346889999999986432111 1467899999999999999999          666654


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...    ........  ....+...   .+...+..+.+++.+||+.||++|||+.|+++.
T Consensus       232 ~~~----~~~~~~~~--~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         232 LHP----MRALFKIP--RNPPPTLH---QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             Cch----hHHHhhcc--ccCCCccc---CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            321    11111111  11111111   112245679999999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=8.3e-39  Score=306.84  Aligned_cols=247  Identities=26%  Similarity=0.433  Sum_probs=195.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||.|+||.||+|..  +++.||+|.+....... .....|+..+..++||||+++++++...    ..+++|
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv   94 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG----DELFVV   94 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC----ceEEEE
Confidence            5799999999999999999986  68999999886543222 2223456666669999999999998765    458999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +||+++++|..++.+..+++.++..++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||++....
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~--------~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655          95 MEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN--------QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             EEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence            9999999999999888899999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....|+..|+|||.+.+.      .++.++|||||||++|||++|          ..||....+    ..
T Consensus       167 ~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slGvil~~lltg----------~~pf~~~~~----~~  222 (296)
T cd06655         167 PEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMVEG----------EPPYLNENP----LR  222 (296)
T ss_pred             ccccc----CCCcCCCccccCcchhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCH----HH
Confidence            32211    1234688899999998765      566899999999999999999          667755321    11


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...... . ...+.+.   .+..++..+.+++.+||..||++|||+.++++
T Consensus       223 ~~~~~~-~-~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         223 ALYLIA-T-NGTPELQ---NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHH-h-cCCcccC---CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            222111 1 1111111   12335678999999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0667|consensus

Probab=100.00  E-value=1.6e-39  Score=320.52  Aligned_cols=199  Identities=27%  Similarity=0.356  Sum_probs=166.4

Q ss_pred             CchHHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-C-----CCceeeee
Q psy14889        126 LPLLIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-H-----ENILGYIG  197 (443)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H-----~nIv~l~g  197 (443)
                      +.....+.+..+|.+.+.||+|+||.|.+|..  +++.||||+++.+.....+...|+..+..++ |     -|+|++++
T Consensus       176 Y~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d  255 (586)
T KOG0667|consen  176 YQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLD  255 (586)
T ss_pred             eeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeee
Confidence            33444444556889999999999999999987  6899999999776554444456666666666 4     38999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      +|...    ++++||+|.+.. +|+++++.   .+++...+..++.||+.||.+||+.        +|||+||||+||||
T Consensus       256 ~F~fr----~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l--------~IIHcDLKPENILL  322 (586)
T KOG0667|consen  256 YFYFR----NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL--------GIIHCDLKPENILL  322 (586)
T ss_pred             ccccc----cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCChhheee
Confidence            99888    568999999976 99999975   5689999999999999999999988        99999999999999


Q ss_pred             cCCC--cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccC
Q psy14889        275 KTNG--TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA  350 (443)
Q Consensus       275 ~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~  350 (443)
                      .+.+  .+||+|||.|....+...       +..-+..|+|||++.+.      +|+.+.||||||||+.||++|.+.
T Consensus       323 ~~~~r~~vKVIDFGSSc~~~q~vy-------tYiQSRfYRAPEVILGl------pY~~~IDmWSLGCIlAEL~tG~PL  387 (586)
T KOG0667|consen  323 KDPKRSRIKVIDFGSSCFESQRVY-------TYIQSRFYRAPEVILGL------PYDTAIDMWSLGCILAELFTGEPL  387 (586)
T ss_pred             ccCCcCceeEEecccccccCCcce-------eeeeccccccchhhccC------CCCCccceeehhhhHHhHhcCccc
Confidence            7654  799999999977654332       33667899999999998      888999999999999999999764

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.5e-39  Score=314.31  Aligned_cols=256  Identities=22%  Similarity=0.243  Sum_probs=190.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+++.  +++.||+|++.....    .......|+..+..++|+||+++++++.+.    ...
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~----~~~   76 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE----NYL   76 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CEE
Confidence            4689999999999999999987  578899998864221    111122344455558999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+++|+|.+++.+  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        77 ~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~--------~iiHrDlkp~Nill~~~~~~kl~DfG~  148 (331)
T cd05624          77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL--------HYVHRDIKPDNVLLDMNGHIRLADFGS  148 (331)
T ss_pred             EEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCchHHEEEcCCCCEEEEeccc
Confidence            999999999999999965  5789999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++........   ......||+.|+|||++.+..... ..++.++|||||||++|||++|          ..||...   
T Consensus       149 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DiwSlGvil~ell~g----------~~Pf~~~---  211 (331)
T cd05624         149 CLKMNQDGTV---QSSVAVGTPDYISPEILQAMEDGM-GKYGPECDWWSLGVCMYEMLYG----------ETPFYAE---  211 (331)
T ss_pred             eeeccCCCce---eeccccCCcccCCHHHHhccccCC-CCCCCcccEEeeehhhhhhhhC----------CCCccCC---
Confidence            9765432211   112346999999999987521110 1456799999999999999999          6777643   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                        ........+.....+..++..+  ...+.++.+++.+|+..++.+  |++++++++.
T Consensus       212 --~~~~~~~~i~~~~~~~~~p~~~--~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         212 --SLVETYGKIMNHEERFQFPSHI--TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             --CHHHHHHHHHcCCCcccCCCcc--ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence              1122222222222233333322  235678999999999876544  4578887653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=5.1e-39  Score=338.23  Aligned_cols=261  Identities=21%  Similarity=0.231  Sum_probs=196.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||+|++......    ......|+..+..++||||+++++++.+.    ...
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~----~~l   77 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG----DPV   77 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC----CEE
Confidence            5799999999999999999987  5889999988643211    12223456666669999999999998766    457


Q ss_pred             EeeecccCcccHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      ++||||+++|+|.+++..            ..+++..++.++.||+.||+|||+.        +|+||||||+|||++.+
T Consensus        78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~--------GIIHRDLKPeNILLd~d  149 (932)
T PRK13184         78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK--------GVLHRDLKPDNILLGLF  149 (932)
T ss_pred             EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC--------CccccCCchheEEEcCC
Confidence            999999999999998853            2356678899999999999999998        99999999999999999


Q ss_pred             CcEEEEecCCcccccccCCc--------------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        278 GTCVIADFGLAVSYSQLSNK--------------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      +.+||+|||+++........              .........||+.|+|||.+.+.      .++.++|||||||++||
T Consensus       150 g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~------~~S~kSDIWSLGVILyE  223 (932)
T PRK13184        150 GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV------PASESTDIYALGVILYQ  223 (932)
T ss_pred             CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC------CCCcHhHHHHHHHHHHH
Confidence            99999999999766221100              00111235799999999998876      66789999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-cHHHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVK  422 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl  422 (443)
                      |+||          ..||......    .......   ...+....  .....+..+.+++.+||+.||++|| ++++++
T Consensus       224 LLTG----------~~PF~~~~~~----ki~~~~~---i~~P~~~~--p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        224 MLTL----------SFPYRRKKGR----KISYRDV---ILSPIEVA--PYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             HHHC----------CCCCCCcchh----hhhhhhh---ccChhhcc--ccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999          6666542111    0000000   00110000  0123567799999999999999996 678888


Q ss_pred             HHHHHHhhccc
Q psy14889        423 KTLIKLACADM  433 (443)
Q Consensus       423 ~~L~~l~~~~~  433 (443)
                      +.|+...+..+
T Consensus       285 ~~Le~~lq~~p  295 (932)
T PRK13184        285 QDLEPHLQGSP  295 (932)
T ss_pred             HHHHHHHhcCc
Confidence            88888776543

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=8e-39  Score=312.24  Aligned_cols=256  Identities=22%  Similarity=0.420  Sum_probs=195.7

Q ss_pred             ccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccC
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSR  203 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~  203 (443)
                      .+|++.+.||+|+||.||++.+.         +..||+|.+.......  .....|+..+.++ +||||+++++++....
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            57899999999999999999752         2368999876432221  2223455555557 8999999999987663


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                          .+++++||+++|+|.+++.+                 ..+++.+++.++.|++.||.|||+.        +++|||
T Consensus        92 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--------givH~d  159 (334)
T cd05100          92 ----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ--------KCIHRD  159 (334)
T ss_pred             ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--------Ceeccc
Confidence                47999999999999999853                 2478889999999999999999998        999999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      |||+|||++.++.+||+|||+++.........  ......++..|+|||.+.+.      .++.++||||||+++|||++
T Consensus       160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~  231 (334)
T cd05100         160 LAARNVLVTEDNVMKIADFGLARDVHNIDYYK--KTTNGRLPVKWMAPEALFDR------VYTHQSDVWSFGVLLWEIFT  231 (334)
T ss_pred             cccceEEEcCCCcEEECCcccceecccccccc--cccCCCcCceEcCHHHhccC------CcCchhhhHHHHHHHHHHHh
Confidence            99999999999999999999997654322111  11222345679999999776      66789999999999999998


Q ss_pred             -cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        347 -RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       347 -g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       |          ..||...     ..+.....+.. ......+     ..++.++.+++.+||+.+|++|||+.++++.|
T Consensus       232 ~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         232 LG----------GSPYPGI-----PVEELFKLLKE-GHRMDKP-----ANCTHELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             cC----------CCCCCCC-----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence             5          5666543     22333333322 1222222     23567899999999999999999999999999


Q ss_pred             HHHhhcc
Q psy14889        426 IKLACAD  432 (443)
Q Consensus       426 ~~l~~~~  432 (443)
                      +++....
T Consensus       291 ~~~~~~~  297 (334)
T cd05100         291 DRVLTVT  297 (334)
T ss_pred             HHHhhhc
Confidence            9988543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1e-38  Score=299.24  Aligned_cols=248  Identities=24%  Similarity=0.439  Sum_probs=193.3

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .+|++.+.||+|+||.||++.+ ++..+|+|.+............|+..+..++||||+++++++...    ...++|+|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e   79 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER----SPICLVFE   79 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC----CceEEEEE
Confidence            4788899999999999999988 478999998865433333344566666669999999999998765    34799999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++..  ..+++..+..++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||++....
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  151 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS--------NVIHRDLAARNCLVGENQVVKVSDFGMTRFVL  151 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC--------CccccccccceEEEcCCCeEEECCCcceeecc
Confidence            9999999999864  4589999999999999999999998        99999999999999999999999999987654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....   ......++..|+|||.+.++      .++.++||||||+++|||++ |          ..||...     ..
T Consensus       152 ~~~~~---~~~~~~~~~~~~aPe~~~~~------~~~~~~Dv~slG~~l~el~~~g----------~~p~~~~-----~~  207 (256)
T cd05112         152 DDQYT---SSTGTKFPVKWSSPEVFSFS------KYSSKSDVWSFGVLMWEVFSEG----------KTPYENR-----SN  207 (256)
T ss_pred             cCccc---ccCCCccchhhcCHhHhccC------CcChHHHHHHHHHHHHHHHcCC----------CCCCCcC-----CH
Confidence            32111   11223356789999998765      56689999999999999998 6          5676542     12


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      ..+...... ..+...+     ...+..+.+|+.+||+.+|++|||+.++++.|
T Consensus       208 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         208 SEVVETINA-GFRLYKP-----RLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHhC-CCCCCCC-----CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            222222221 1122122     22456799999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=6.1e-39  Score=307.45  Aligned_cols=262  Identities=16%  Similarity=0.180  Sum_probs=185.3

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCccchHHH-------------HHHHHHHhccCCCceee
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEASWSRE-------------TEIYSTVLLRHENILGY  195 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~~~~e-------------~ei~~~~~l~H~nIv~l  195 (443)
                      ..++|.+.+.||+|+||.||+|.+.     +..+|+|+....... ...|             .+......+.|+||+++
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   88 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENET-IVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY   88 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCc-hhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence            3478999999999999999999973     346677754322211 1111             12223334789999999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      ++.+..........++++|++.. ++.+.+... ..++..+..++.|++.||+|||+.        +|+||||||+|||+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiHrDiKp~Nill  159 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH--------GISHGDIKPENIMV  159 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEE
Confidence            99766554333345788887754 666666543 468888999999999999999998        99999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +.++.+||+|||+|+.+........   .......||+.|+|||++.+.      .++.++|||||||++|||++|    
T Consensus       160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~------~~~~~~DiwSlG~~l~el~~g----  229 (294)
T PHA02882        160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA------CVTRRGDLESLGYCMLKWAGI----  229 (294)
T ss_pred             cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC------CCCcHHHHHHHHHHHHHHHhC----
Confidence            9999999999999987643221111   112234699999999998876      677899999999999999999    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                            ..||...........................    ...+++.+.+++..||..+|++||++.++++.|
T Consensus       230 ------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        230 ------KLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             ------CCCCCccccchHHHHHhHHHHHHHhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence                  7787664221111111110000000011110    123567899999999999999999999999876

>KOG0574|consensus

Probab=100.00  E-value=2.3e-41  Score=303.35  Aligned_cols=244  Identities=28%  Similarity=0.495  Sum_probs=198.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc-CccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR-DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +-|.+.++||+|+||.||+|.+  .|..||||.+... +.++..  .||-++.+.+.|++|++||.+...    ..+|+|
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEII--KEISIMQQC~S~yVVKYYGSYFK~----sDLWIV  106 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEII--KEISIMQQCKSKYVVKYYGSYFKH----SDLWIV  106 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHH--HHHHHHHHcCCchhhhhhhhhccC----CceEee
Confidence            5688899999999999999988  6999999987543 223333  455555558999999999988766    348999


Q ss_pred             ecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||.-|++.+.++  +.++++.++..++...++||+|||..        .-||||||+.|||++.+|.+||+|||.|..
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~--------~KIHRDIKAGNILLNT~G~AKLADFGVAGQ  178 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL--------KKIHRDIKAGNILLNTDGIAKLADFGVAGQ  178 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH--------HHHHhhcccccEEEcccchhhhhhccccch
Confidence            99999999999885  67899999999999999999999988        669999999999999999999999999977


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      +.+...+    .++..||+.|||||++..-      .|..++||||||++..||..|          +.||.+..++.  
T Consensus       179 LTDTMAK----RNTVIGTPFWMAPEVI~EI------GY~~~ADIWSLGITaIEMAEG----------~PPYsDIHPMR--  236 (502)
T KOG0574|consen  179 LTDTMAK----RNTVIGTPFWMAPEVIEEI------GYDTKADIWSLGITAIEMAEG----------RPPYSDIHPMR--  236 (502)
T ss_pred             hhhhHHh----hCccccCcccccHHHHHHh------ccchhhhHhhhcchhhhhhcC----------CCCcccccccc--
Confidence            6643322    3567899999999999875      677899999999999999999          77888876543  


Q ss_pred             hHHHHhhhhhcCCC-CCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQR-PVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           .++...... |.+.   .+..-+.++.+++++||..+|++|-|+.++++
T Consensus       237 -----AIFMIPT~PPPTF~---KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  237 -----AIFMIPTKPPPTFK---KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             -----eeEeccCCCCCCCC---ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence                 332222111 1111   12345678999999999999999999998876

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=9e-39  Score=299.77  Aligned_cols=245  Identities=27%  Similarity=0.425  Sum_probs=190.4

Q ss_pred             ceeeeecCeEEEEEEEC---Cc--eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH---GE--NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~---~~--~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|.+.   ++  .||||.+......  ......|+..+..++||||+++++++..     ..+++|||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~v~e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-----HPLMMVTE   75 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-----CeEEEEEE
Confidence            46899999999999872   22  6899988654431  2233467777777999999999999876     24799999


Q ss_pred             ccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        215 YHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       215 ~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+++|+|.+++.+.   .+++..+..++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||+++.+
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~i~H~di~p~nil~~~~~~~kl~dfg~~~~~  147 (257)
T cd05040          76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK--------RFIHRDLAARNILLASDDKVKIGDFGLMRAL  147 (257)
T ss_pred             ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC--------CccccccCcccEEEecCCEEEeccccccccc
Confidence            99999999999653   589999999999999999999998        9999999999999999999999999999876


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ......... .....++..|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     .
T Consensus       148 ~~~~~~~~~-~~~~~~~~~y~~pE~~~~~------~~~~~~Di~slG~~l~el~t~g----------~~p~~~~-----~  205 (257)
T cd05040         148 PQNEDHYVM-EEHLKVPFAWCAPESLRTR------TFSHASDVWMFGVTLWEMFTYG----------EEPWAGL-----S  205 (257)
T ss_pred             cccccceec-ccCCCCCceecCHHHhccc------CcCchhhhHHHHHHHHHHHhCC----------CCCCCCC-----C
Confidence            543222111 1234577889999998766      66789999999999999998 8          6677543     2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ..+....+.........+     ...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       206 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         206 GSQILKKIDKEGERLERP-----EACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHhcCCcCCCC-----ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            222222222222222222     335678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.6e-39  Score=306.16  Aligned_cols=245  Identities=31%  Similarity=0.463  Sum_probs=193.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.|+..+.||+|+||.||+|.+  ++..||+|.+......  ....+.|+..+..++||||+++++.+...    ...++
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~l   79 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG----TKLWI   79 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC----CceEE
Confidence            4577888999999999999987  5789999987643322  12234566666779999999999998765    45799


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++++|.+++....+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.+||+|||++..+
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06642          80 IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE--------RKIHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             EEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC--------CeeccCCChheEEEeCCCCEEEccccccccc
Confidence            99999999999999888899999999999999999999988        9999999999999999999999999998765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....    ......|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||.+..+.    
T Consensus       152 ~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~tg----------~~p~~~~~~~----  207 (277)
T cd06642         152 TDTQI----KRNTFVGTPFWMAPEVIKQS------AYDFKADIWSLGITAIELAKG----------EPPNSDLHPM----  207 (277)
T ss_pred             cCcch----hhhcccCcccccCHHHhCcC------CCchhhhHHHHHHHHHHHHhC----------CCCCcccchh----
Confidence            43221    11234678899999999776      566899999999999999999          5566543211    


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .....+ .....+.+     ....+..+.+++.+||+.+|++|||+.++++
T Consensus       208 -~~~~~~-~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         208 -RVLFLI-PKNSPPTL-----EGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             -hHHhhh-hcCCCCCC-----CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence             111111 11111222     1335677999999999999999999999998

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-38  Score=299.28  Aligned_cols=245  Identities=25%  Similarity=0.406  Sum_probs=193.2

Q ss_pred             ceeeeecCeEEEEEEEC-----CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|...     +..||+|.+.......  .....|+..+..++|+||+++++++...    ..+++|||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE----EPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC----CceEEEEE
Confidence            46899999999999984     7789999886554332  2334566666668999999999998874    45799999


Q ss_pred             ccCcccHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        215 YHSFGSLYDHLNR----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       215 ~~~~gsL~~~l~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      |+++|+|.+++..          ..+++..+..++.|++.||+|||+.        +++|+||||+||+++.++.+||+|
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~--------~i~H~di~p~nili~~~~~~~l~d  148 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK--------KFVHRDLAARNCLVGEDLVVKISD  148 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC--------CcccCccCcceEEECCCCcEEEcc
Confidence            9999999999964          5689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||.+........  ........++..|+|||.+...      .++.++||||||+++|||+++.         ..||...
T Consensus       149 fg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g---------~~p~~~~  211 (262)
T cd00192         149 FGLSRDVYDDDY--YRKKTGGKLPIRWMAPESLKDG------IFTSKSDVWSFGVLLWEIFTLG---------ATPYPGL  211 (262)
T ss_pred             cccccccccccc--cccccCCCcCccccCHHHhccC------CcchhhccHHHHHHHHHHHhcC---------CCCCCCC
Confidence            999977654321  1112334678899999998776      5668999999999999999841         5666654


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                           ....+...+.. ......+     ..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus       212 -----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         212 -----SNEEVLEYLRK-GYRLPKP-----EYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             -----CHHHHHHHHHc-CCCCCCC-----ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                 22333333322 2222222     335678999999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4e-39  Score=319.05  Aligned_cols=261  Identities=25%  Similarity=0.347  Sum_probs=189.0

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCc-ccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNS-CTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~-~~~~~  210 (443)
                      +|++.+.||+|+||.||++..  +|+.||||.+......   ......|+..+..++||||+++++++...... ...++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999987  6899999987543211   12223456666669999999999998765421 12589


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +|+||+. ++|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivH~dlkp~Nili~~~~~~kL~Dfg~a~  151 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA--------GILHRDIKPGNLLVNSNCVLKICDFGLAR  151 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCChHHEEECCCCCEEecccccee
Confidence            9999997 57887774 46799999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC--
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM--  367 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~--  367 (443)
                      ........   ......+|..|+|||.+.+..     .++.++|||||||++|||++|          ..||....+.  
T Consensus       152 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g----------~~pf~~~~~~~~  213 (372)
T cd07853         152 VEEPDESK---HMTQEVVTQYYRAPEILMGSR-----HYTSAVDIWSVGCIFAELLGR----------RILFQAQSPIQQ  213 (372)
T ss_pred             ecccCccc---cCCCCCcCCCcCCHHHHcCCC-----CCCcHHHHHhHHHHHHHHHcC----------CCCCCCCCHHHH
Confidence            65432211   123346789999999987642     356799999999999999999          5555432110  


Q ss_pred             ---------CCChHHH-------HhhhhhcCCCCC-CCCC-CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 ---------DPSFDDM-------RKVICIDQQRPV-LPNR-WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ---------~~~~~~~-------~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                               .+..+.+       ...+......+. .+.. ......+.++.+|+.+||+.||++|||+.|+++.
T Consensus       214 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         214 LDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                     0001111       011111111111 0000 0112345679999999999999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG4279|consensus

Probab=100.00  E-value=5e-40  Score=322.38  Aligned_cols=242  Identities=29%  Similarity=0.410  Sum_probs=193.4

Q ss_pred             eeeeecCeEEEEEEE--CCceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcc
Q psy14889        143 CIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFG  219 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~g  219 (443)
                      +||+|.||+||-|++  +...+|||.+..++.... -.-.||.....|+|.|||+++|.+...    +.+-+.||-++||
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen----Gf~kIFMEqVPGG  657 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN----GFFKIFMEQVPGG  657 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC----CeEEEEeecCCCC
Confidence            799999999999988  455679998865443322 223466666679999999999997665    5788999999999


Q ss_pred             cHHHHhcc--cCC--CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc-CCCcEEEEecCCccccccc
Q psy14889        220 SLYDHLNR--TTL--NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       220 sL~~~l~~--~~l--~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~  294 (443)
                      ||.++|+.  +++  ++.++-.+..||+.||.|||.+        .|||||||-+||||+ -.|.+||+|||-++.+...
T Consensus       658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen--------~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN--------KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc--------ceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence            99999975  566  7888999999999999999999        999999999999996 4689999999999877653


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..    .+.++.||..|||||++..+..    .|+.++|||||||++.||.||          +.||.+.-.   ....+
T Consensus       730 nP----~TETFTGTLQYMAPEvIDqG~R----GYG~aADIWS~GCT~vEMATG----------rPPF~Elgs---pqAAM  788 (1226)
T KOG4279|consen  730 NP----CTETFTGTLQYMAPEVIDQGPR----GYGKAADIWSFGCTMVEMATG----------RPPFVELGS---PQAAM  788 (1226)
T ss_pred             Cc----cccccccchhhhChHhhccCCc----CCCchhhhhhccceeEeeccC----------CCCeeecCC---hhHhh
Confidence            32    2356789999999999987743    778999999999999999999          666665421   11222


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+. ..-...|++|     .+.+.+.+.+|.+|+.+||.+||++.++++
T Consensus       789 FkV-GmyKvHP~iP-----eelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  789 FKV-GMYKVHPPIP-----EELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             hhh-cceecCCCCc-----HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            221 1123445555     568889999999999999999999999885

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.6e-38  Score=296.81  Aligned_cols=243  Identities=24%  Similarity=0.401  Sum_probs=187.2

Q ss_pred             ceeeeecCeEEEEEEE-CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCc
Q psy14889        142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSF  218 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~  218 (443)
                      ++||+|+||.||+|.. ++..+|+|.+......  ......|+..+..++||||+++++++....    ..++||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ----PIYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC----ccEEEEECCCC
Confidence            4689999999999987 5788999987654322  122334555666699999999999987663    47999999999


Q ss_pred             ccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        219 GSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       219 gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      |+|.+++..  ..+++..++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++........
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  148 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK--------NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY  148 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecccChheEEEcCCCeEEECCCccceecccccc
Confidence            999999864  4589999999999999999999988        999999999999999999999999999865432211


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHH
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMR  375 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~  375 (443)
                      ..   .....++..|+|||++.+.      .++.++||||||+++||+++ |          ..||...     ......
T Consensus       149 ~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~ll~~~~~~g----------~~p~~~~-----~~~~~~  204 (250)
T cd05085         149 SS---SGLKQIPIKWTAPEALNYG------RYSSESDVWSYGILLWETFSLG----------VCPYPGM-----TNQQAR  204 (250)
T ss_pred             cc---CCCCCCcccccCHHHhccC------CCCchhHHHHHHHHHHHHhcCC----------CCCCCCC-----CHHHHH
Confidence            11   1122345679999998765      56789999999999999998 7          6677653     122222


Q ss_pred             hhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ..+. ...+...+     ..++..+.+++.+||+.+|++|||+.++++.|.
T Consensus       205 ~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         205 EQVE-KGYRMSCP-----QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHH-cCCCCCCC-----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            2221 12222222     335678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=6.8e-39  Score=307.59  Aligned_cols=248  Identities=27%  Similarity=0.450  Sum_probs=194.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|..  +++.||+|.+....... .....|+..+..++|+||+++++++...    ...++
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~l   93 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWV   93 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC----CEEEE
Confidence            37899999999999999999986  68999999886543322 2234556666669999999999998766    45799


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++++|.+++.+..+++.++..++.|++.||.|||+.        +++||||||+|||++.++.+||+|||++...
T Consensus        94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~--------~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             eecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence            99999999999999888899999999999999999999998        9999999999999999999999999998765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....+++.|+|||.+.+.      .++.++|||||||++|+|++|          ..||....+.    
T Consensus       166 ~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slGvil~~l~tg----------~~pf~~~~~~----  221 (297)
T cd06656         166 TPEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMVEG----------EPPYLNENPL----  221 (297)
T ss_pred             cCCccC----cCcccCCccccCHHHHcCC------CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCCcc----
Confidence            432211    1234688899999998765      566899999999999999999          5666542111    


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..... .. ....+...   .+...+..+.+++.+||+.||++|||+.++++
T Consensus       222 ~~~~~-~~-~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         222 RALYL-IA-TNGTPELQ---NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             hheee-ec-cCCCCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11111 10 11111111   12335567899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=7.7e-39  Score=301.59  Aligned_cols=237  Identities=19%  Similarity=0.325  Sum_probs=177.7

Q ss_pred             ceeeeecCeEEEEEEEC--------------CceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        142 ECIGKGRYGEVWRGVWH--------------GENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~--------------~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      +.||+|+||.||+|.+.              ...||+|.+........ ....++..+..++||||+++++++....   
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~---   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV---   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence            46899999999999852              22588887754433221 2234455555689999999999987663   


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-----
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----  279 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-----  279 (443)
                       ..++||||+++|+|..++.+  ..+++.+++.++.||+.||+|||+.        +|+||||||+|||++.++.     
T Consensus        78 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dlkp~Nill~~~~~~~~~~  148 (262)
T cd05077          78 -ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK--------DLVHGNVCTKNILLAREGIDGECG  148 (262)
T ss_pred             -CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC--------CeECCCCCcccEEEecCCccCCCC
Confidence             36899999999999998864  4689999999999999999999998        9999999999999987664     


Q ss_pred             --EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccc
Q psy14889        280 --CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEE  356 (443)
Q Consensus       280 --~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~  356 (443)
                        +|++|||++......        ....++..|+|||.+....     .++.++|||||||++|||++ |         
T Consensus       149 ~~~~l~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~~l~el~~~~---------  206 (262)
T cd05077         149 PFIKLSDPGIPITVLSR--------QECVERIPWIAPECVEDSK-----NLSIAADKWSFGTTLWEICYNG---------  206 (262)
T ss_pred             ceeEeCCCCCCccccCc--------ccccccccccChhhhcCCC-----CCCchhHHHHHHHHHHHHHhCC---------
Confidence              899999998654321        2235788999999886431     46689999999999999985 5         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                       ..||....     ..+......  .... ..     ...+.++.+|+.+||+.||++||++.+|++.|+
T Consensus       207 -~~p~~~~~-----~~~~~~~~~--~~~~-~~-----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         207 -EIPLKDKT-----LAEKERFYE--GQCM-LV-----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             -CCCCCCcc-----hhHHHHHHh--cCcc-CC-----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence             55655431     111111111  1111 11     123467999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.2e-38  Score=303.43  Aligned_cols=252  Identities=23%  Similarity=0.385  Sum_probs=190.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .|++.+.||+|+||.||+|..  ++..+++|.+...... ......|+..+..++||||+++++++...    ...++|+
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~~v~   81 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNLWILI   81 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC----CEEEEEE
Confidence            467889999999999999998  4678899987544322 12223455566669999999999998765    4579999


Q ss_pred             cccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+++|+|..++.+  ..+++..+..++.|++.||.|||+.        +++||||||+|||++.++.+||+|||++...
T Consensus        82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~--------~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN--------KIIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCcccEEEccCCCEEEccccccccc
Confidence            99999999998753  5689999999999999999999998        9999999999999999999999999998655


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....|+..|+|||++....... ..++.++|||||||++|||++|          ..||....    ..
T Consensus       154 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Dv~slGvil~el~~g----------~~p~~~~~----~~  214 (282)
T cd06643         154 TRTIQR----RDSFIGTPYWMAPEVVMCETSKD-RPYDYKADVWSLGITLIEMAQI----------EPPHHELN----PM  214 (282)
T ss_pred             cccccc----cccccccccccCHhhccccCCCC-CCCCccchhhhHHHHHHHHccC----------CCCccccC----HH
Confidence            432211    13346889999999985322111 1566799999999999999999          66665431    11


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .........  ..+..+   .+...+.++.+++.+||+.||++|||+.++++.
T Consensus       215 ~~~~~~~~~--~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         215 RVLLKIAKS--EPPTLA---QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHHhhc--CCCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            222222111  111111   122356789999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.1e-38  Score=304.40  Aligned_cols=245  Identities=24%  Similarity=0.299  Sum_probs=188.7

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      |+..+.||+|+||.||++..  +++.||||.+.......    .....|+..+..++|+||+.+++.+.+.    ..+++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~l   77 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK----DALCL   77 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC----CEEEE
Confidence            67788999999999999988  58899999876432211    1122455566669999999999998766    35799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.++|+|||++
T Consensus        78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~iiH~dikp~Nil~~~~~~~~l~Dfg~~  149 (285)
T cd05630          78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE--------RIVYRDLKPENILLDDHGHIRISDLGLA  149 (285)
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence            9999999999998843   3589999999999999999999988        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........     .....||..|+|||++.+.      .++.++||||||+++|||++|          ..||...... 
T Consensus       150 ~~~~~~~~-----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~~l~~l~~g----------~~Pf~~~~~~-  207 (285)
T cd05630         150 VHVPEGQT-----IKGRVGTVGYMAPEVVKNE------RYTFSPDWWALGCLLYEMIAG----------QSPFQQRKKK-  207 (285)
T ss_pred             eecCCCcc-----ccCCCCCccccChHHHcCC------CCCCccccHHHHHHHHHHHhC----------CCCCCCCCcc-
Confidence            65542221     1234689999999999776      667899999999999999999          6677653211 


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                      ...........  ......     ....+.++.+|+.+||+.||++|||     ++|+++
T Consensus       208 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         208 IKREEVERLVK--EVQEEY-----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             chHHHHHhhhh--hhhhhc-----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            01111111111  011111     1235567999999999999999999     888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-39  Score=315.65  Aligned_cols=238  Identities=27%  Similarity=0.414  Sum_probs=179.7

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHh-ccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ||+|+||.||+|+.  +++.||||++......      ....|.++..... -+||||+++++.+.+.    ..+++|||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~----~~~~lv~e   76 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD----SDLYLVTD   76 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC----CeEEEEEc
Confidence            69999999999987  5899999998643211      1112233332211 1799999999988776    45899999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~--------~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~  148 (330)
T cd05586          77 YMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY--------DIVYRDLKPENILLDATGHIALCDFGLSKANLT  148 (330)
T ss_pred             CCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCCHHHeEECCCCCEEEecCCcCcCCCC
Confidence            9999999998864 5699999999999999999999998        999999999999999999999999999865332


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ...    ......||..|+|||++.+..     .++.++|||||||++|||++|          ..||...     ....
T Consensus       149 ~~~----~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DvwslGvil~elltG----------~~Pf~~~-----~~~~  204 (330)
T cd05586         149 DNK----TTNTFCGTTEYLAPEVLLDEK-----GYTKHVDFWSLGVLVFEMCCG----------WSPFYAE-----DTQQ  204 (330)
T ss_pred             CCC----CccCccCCccccCHHHHcCCC-----CCCCccceeccccEEEEeccC----------CCCCCCC-----CHHH
Confidence            111    123457999999999987542     356899999999999999999          6677553     2233


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC----cHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL----SALRVKK  423 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp----s~~evl~  423 (443)
                      +.+.+...  ...++.    ...+..+.+++++||+.||++||    ++.++++
T Consensus       205 ~~~~i~~~--~~~~~~----~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         205 MYRNIAFG--KVRFPK----NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHcC--CCCCCC----ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            33332221  222332    22456789999999999999999    4566554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0032|consensus

Probab=100.00  E-value=8.6e-39  Score=311.92  Aligned_cols=252  Identities=21%  Similarity=0.338  Sum_probs=203.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhcc-CCCceeeeeeccccCC
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLR-HENILGYIGSDMTSRN  204 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~  204 (443)
                      ......|++.+.||+|.||.||+++.  +|+.+|+|.+.+....    ....+.|+..+..+. |||||.+++++.+.. 
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-  109 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-  109 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-
Confidence            34457899999999999999999998  5899999998664432    123345666666688 999999999998884 


Q ss_pred             cccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC----CcE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN----GTC  280 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~----~~~  280 (443)
                         .+++|||++.+|.|.+.+....+++..+..++.|++.++.|||+.        +|+||||||+|+|+...    +.+
T Consensus       110 ---~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~--------gvvHrDlKpEN~L~~~~~~~~~~i  178 (382)
T KOG0032|consen  110 ---SVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL--------GVVHRDLKPENLLLASKDEGSGRI  178 (382)
T ss_pred             ---eEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC--------CceeccCCHHHeeeccccCCCCcE
Confidence               589999999999999998654699999999999999999999998        99999999999999654    479


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      |++|||+|....... .    ....+||+.|+|||++...      .|+..+||||+||++|.|++|          ..|
T Consensus       179 k~~DFGla~~~~~~~-~----~~~~~Gtp~y~APEvl~~~------~y~~~~DiWS~Gvi~yiLL~G----------~~P  237 (382)
T KOG0032|consen  179 KLIDFGLAKFIKPGE-R----LHTIVGTPEYVAPEVLGGR------PYGDEVDVWSIGVILYILLSG----------VPP  237 (382)
T ss_pred             EEeeCCCceEccCCc-e----EeeecCCccccCchhhcCC------CCCcccchhHHHHHHHHHhhC----------CCC
Confidence            999999998877521 1    2456899999999999875      788999999999999999999          788


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      |.+..    ......++..   ....++..+. +..+..+.++++.++..||.+|+|+.++++.
T Consensus       238 F~~~~----~~~~~~~i~~---~~~~f~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  238 FWGET----EFEIFLAILR---GDFDFTSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             CcCCC----hhHHHHHHHc---CCCCCCCCCc-cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            87752    1222232222   2223333222 3367889999999999999999999999984

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=9.3e-39  Score=315.51  Aligned_cols=255  Identities=23%  Similarity=0.296  Sum_probs=187.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC--ccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~  207 (443)
                      .++|++.+.||+|+||.||++..  .++.||||++.....   .......|+..+..++||||+++++++.....  ...
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            47899999999999999999987  588999998864321   11222345566666999999999998764321  223


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .+++||||+++ +|.+++. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       103 ~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhC--------CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence            57999999975 7877774 3588999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++......     ......||..|+|||++.+.      .++.++|||||||++|||++|          +.||..... 
T Consensus       173 a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~ell~g----------~~pf~~~~~-  230 (364)
T cd07875         173 ARTAGTSF-----MMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKG----------GVLFPGTDH-  230 (364)
T ss_pred             ccccCCCC-----cccCCcccCCcCCHHHHhCC------CCCchhhHHhHHHHHHHHHhC----------CCCCCCCCH-
Confidence            97654321     12345789999999999776      677899999999999999999          455543210 


Q ss_pred             CCChHHHHhhhhh-------------------cCCCCCCCC---------C------CCCchhHHHHHHHHHHHhcCCcC
Q psy14889        368 DPSFDDMRKVICI-------------------DQQRPVLPN---------R------WVSDSTLNAMTKVMKECWHQNAN  413 (443)
Q Consensus       368 ~~~~~~~~~~~~~-------------------~~~~~~~~~---------~------~~~~~~~~~l~~li~~cl~~dP~  413 (443)
                         .+...+.+..                   ...++....         .      .........+++|+.+||+.||+
T Consensus       231 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~  307 (364)
T cd07875         231 ---IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS  307 (364)
T ss_pred             ---HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcc
Confidence               0111111000                   000110000         0      00011235789999999999999


Q ss_pred             CCCcHHHHHHH
Q psy14889        414 VRLSALRVKKT  424 (443)
Q Consensus       414 ~Rps~~evl~~  424 (443)
                      +|||+.|+++.
T Consensus       308 ~R~t~~e~L~h  318 (364)
T cd07875         308 KRISVDEALQH  318 (364)
T ss_pred             cCCCHHHHhcC
Confidence            99999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=5.2e-39  Score=310.10  Aligned_cols=252  Identities=23%  Similarity=0.297  Sum_probs=187.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|.+.+.||+|+||.||+|..  +++.||+|.+......  ......|+..+..++||||+++++++...    ...++
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l   81 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD----KSLTL   81 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC----CeEEE
Confidence            5799999999999999999987  5788999988643322  22233466666669999999999998766    35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||+++ +|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--------~ivH~dlkp~Nill~~~~~~kl~Dfg~~~  152 (309)
T cd07872          82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR--------KVLHRDLKPQNLLINERGELKLADFGLAR  152 (309)
T ss_pred             EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEECccccce
Confidence            9999985 88888754  3588999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....+|..|+|||.+.+..     .++.++|||||||++|||+||          ..||......  
T Consensus       153 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~tg----------~~pf~~~~~~--  211 (309)
T cd07872         153 AKSVPTKT----YSNEVVTLWYRPPDVLLGSS-----EYSTQIDMWGVGCIFFEMASG----------RPLFPGSTVE--  211 (309)
T ss_pred             ecCCCccc----cccccccccccCCHHHhCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCChH--
Confidence            54332211    12346789999999986542     456899999999999999999          4555432110  


Q ss_pred             ChHHHHhhhhhc-------------------CCCCC-CCCC--CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICID-------------------QQRPV-LPNR--WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~-------------------~~~~~-~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        +.........                   ...+. .+..  ......+.++.+++.+||+.||.+|||+.|+++
T Consensus       212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         212 --DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             --HHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence              1111110000                   00000 0000  001234567899999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.6e-38  Score=303.19  Aligned_cols=246  Identities=24%  Similarity=0.305  Sum_probs=187.9

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      |+..+.||+|+||+||+|.+  +++.||+|.+......    ......|+..+..++|+||+.+.+.+...    ...++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~l   77 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK----DALCL   77 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC----CEEEE
Confidence            66778999999999999988  5889999988543211    11223455566669999999999888766    35799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+||++++++.+||+|||++
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~iiH~dikp~Nili~~~~~~kl~Dfg~~  149 (285)
T cd05632          78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE--------NTVYRDLKPENILLDDYGHIRISDLGLA  149 (285)
T ss_pred             EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence            9999999999988853   3699999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........     .....|+..|+|||++.+.      .++.++|+||||+++|||++|          ..||...... 
T Consensus       150 ~~~~~~~~-----~~~~~g~~~~~aPE~~~~~------~~~~~~Di~slG~~l~~l~~g----------~~P~~~~~~~-  207 (285)
T cd05632         150 VKIPEGES-----IRGRVGTVGYMAPEVLNNQ------RYTLSPDYWGLGCLIYEMIEG----------QSPFRGRKEK-  207 (285)
T ss_pred             eecCCCCc-----ccCCCCCcCccChHHhcCC------CCCcccchHHHHHHHHHHHhC----------CCCCCCCCHH-
Confidence            65532211     1234789999999999765      667899999999999999999          6777653110 


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~  424 (443)
                      .....+...+.  ......     ....+..+.+|+.+||+.||++||+     +.++++.
T Consensus       208 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         208 VKREEVDRRVL--ETEEVY-----SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHHHHHHhhh--cccccc-----CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            00111111111  111111     2335567899999999999999999     6676663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.3e-39  Score=322.22  Aligned_cols=256  Identities=22%  Similarity=0.254  Sum_probs=185.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      ..|.+.+.||+|+||.||+|.+  .++.||||....   ....  .|+..+..++|+|||++++++...    ...++||
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~--~E~~iL~~L~HpnIv~l~~~~~~~----~~~~lv~  239 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSV--HEARLLRRLSHPAVLALLDVRVVG----GLTCLVL  239 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHH--HHHHHHHHCCCCCCCcEEEEEEEC----CEEEEEE
Confidence            4799999999999999999998  478899996422   2233  345555569999999999998765    3578999


Q ss_pred             cccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |++. ++|.+++..  ..+++.+++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++.+
T Consensus       240 e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--------gIvHrDLKP~NILl~~~~~vkL~DFGla~~~  310 (461)
T PHA03211        240 PKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE--------GIIHRDIKTENVLVNGPEDICLGDFGAACFA  310 (461)
T ss_pred             EccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEECcCCHHHEEECCCCCEEEcccCCceec
Confidence            9995 699988854  4699999999999999999999998        9999999999999999999999999999765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......  .......||..|+|||++.+.      .++.++|||||||+||||++|..+.  |.....|+..     ...
T Consensus       311 ~~~~~~--~~~~~~~GT~~Y~APE~~~~~------~~~~~sDvwSlGviL~El~~g~~~l--f~~~~~~~~~-----~~~  375 (461)
T PHA03211        311 RGSWST--PFHYGIAGTVDTNAPEVLAGD------PYTPSVDIWSAGLVIFEAAVHTASL--FSASRGDERR-----PYD  375 (461)
T ss_pred             cccccc--ccccccCCCcCCcCHHHHcCC------CCCchHHHHHHHHHHHHHHHcCCCc--ccCCcccccC-----CcH
Confidence            432211  111245799999999999876      6778999999999999999985432  1111111111     111


Q ss_pred             HHHHhhhhhcC-------------------------CCCCCC-CCCCC-chhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        372 DDMRKVICIDQ-------------------------QRPVLP-NRWVS-DSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       372 ~~~~~~~~~~~-------------------------~~~~~~-~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ..+.+.+....                         .++... ..|.. ......+.+|+.+||+.||.+|||+.|+++.
T Consensus       376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            11211111100                         001000 00100 0123468899999999999999999999863

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.1e-38  Score=305.81  Aligned_cols=261  Identities=23%  Similarity=0.317  Sum_probs=189.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||++.+  ++..+|+|.+.......  .....|+..+..++||||+++++.+.+.    ..+++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l   76 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD----GEISI   76 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC----CEEEE
Confidence            3688999999999999999988  57889999875432221  1223466666669999999999998776    46899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||+++|+|.+++++ ..+++..+..++.|++.||.|||+..       +++|+||||+|||++.++.+||+|||++..
T Consensus        77 v~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-------~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  149 (308)
T cd06615          77 CMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH-------KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  149 (308)
T ss_pred             EeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC-------CEEECCCChHHEEEecCCcEEEccCCCccc
Confidence            9999999999999965 56899999999999999999999731       899999999999999999999999999865


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC------CC---C
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK------AP---Y  361 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~------~P---~  361 (443)
                      .....      .....|+..|+|||.+.+.      .++.++||||||+++|||++|+.|+.......      .+   .
T Consensus       150 ~~~~~------~~~~~~~~~~~aPE~~~~~------~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  217 (308)
T cd06615         150 LIDSM------ANSFVGTRSYMSPERLQGT------HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG  217 (308)
T ss_pred             ccccc------cccCCCCcCccChhHhcCC------CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccc
Confidence            43221      1335788999999998765      56689999999999999999955432100000      00   0


Q ss_pred             CC---------CCCCC---CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        362 HD---------LVPMD---PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       362 ~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ..         .....   .......... .....+..+.    ...+.++.+++.+||+.||++|||+.++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         218 EAKESHRPVSGHPPDSPRPMAIFELLDYI-VNEPPPKLPS----GAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cccCCcccccCCCCCccchhhHHHHHHHH-hcCCCccCcC----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00         00000   0000000000 1111222221    2255679999999999999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.2e-38  Score=298.61  Aligned_cols=250  Identities=27%  Similarity=0.415  Sum_probs=192.6

Q ss_pred             cccccceeeeecCeEEEEEEE-CCceeEEEEeeccCcc-------chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA-------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~-------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|+..+.||+|+||.||+|.. +++.+|||.+......       ....+.|+..+..++|+||+++++++.+.    ..
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~   76 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----NT   76 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC----Ce
Confidence            467789999999999999987 6889999987643211       11224466666669999999999998776    45


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .++++||+++++|.+++.+ ..+++..+..++.|++.||+|||+.        +|+|+||+|+||++++++.+||+|||+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~dfg~  148 (265)
T cd06631          77 ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN--------CVVHRDIKGNNVMLMPNGIIKLIDFGC  148 (265)
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCcCHHhEEECCCCeEEeccchh
Confidence            8999999999999999965 5789999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCc--CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        288 AVSYSQLSNK--MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       288 a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      +.........  .........|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||....
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~slG~~~~~l~~g----------~~p~~~~~  212 (265)
T cd06631         149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES------GYGRKSDIWSIGCTVFEMATG----------KPPLASMD  212 (265)
T ss_pred             hHhhhhccccccccccccccCCCccccChhhhcCC------CCcchhhHHHHHHHHHHHHhC----------CCccccCC
Confidence            8765321111  11112334688999999998765      566899999999999999999          66775431


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ...............+.++     ...+.++.+++++||+.+|++||++.++++
T Consensus       213 ----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         213 ----RLAAMFYIGAHRGLMPRLP-----DSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ----hHHHHHHhhhccCCCCCCC-----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                1122222211111222232     335678999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=4.7e-39  Score=327.70  Aligned_cols=193  Identities=21%  Similarity=0.288  Sum_probs=150.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc------CCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~------H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++............|+..+..++      |.+++++++++....   
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~---  204 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET---  204 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC---
Confidence            47899999999999999999987  5788999998643222222223333333343      456888888876543   


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-------
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-------  278 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-------  278 (443)
                      ..+++|||++ +++|.+++.+ ..+++..+..++.||+.||+|||++.       +||||||||+|||++.++       
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL-------HLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC-------CeecCCCCHHHEEEecCCccccccc
Confidence            3578999988 5688888754 67999999999999999999999731       899999999999998765       


Q ss_pred             ---------cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhccc
Q psy14889        279 ---------TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK  349 (443)
Q Consensus       279 ---------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~  349 (443)
                               .+||+|||++.....       ......||+.|+|||++.+.      .++.++|||||||++|||++|+.
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~~-------~~~~~~gt~~Y~APE~~~~~------~~~~~~DiwSlGvil~elltG~~  343 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDERH-------SRTAIVSTRHYRSPEVVLGL------GWMYSTDMWSMGCIIYELYTGKL  343 (467)
T ss_pred             ccccCCCCceEEECCCCccccCcc-------ccccccCCccccCcHHhhcC------CCCcHHHHHHHHHHHHHHHhCCC
Confidence                     499999998753321       12345799999999999876      67789999999999999999954


Q ss_pred             CC
Q psy14889        350 AN  351 (443)
Q Consensus       350 ~~  351 (443)
                      |+
T Consensus       344 pf  345 (467)
T PTZ00284        344 LY  345 (467)
T ss_pred             CC
Confidence            43

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3e-38  Score=302.04  Aligned_cols=258  Identities=26%  Similarity=0.417  Sum_probs=193.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCC-cccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRN-SCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~-~~~~~  209 (443)
                      ..++|.+.+.||+|+||.||++..  +++.+|+|++..........+.|+..+..+ +||||+++++++...+. ....+
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            357899999999999999999987  588999998865433223334455555556 89999999999875432 12458


Q ss_pred             EeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||+++|+|.++++     ...+++..++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|
T Consensus       100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~dlkp~nili~~~~~~kl~d  171 (291)
T cd06639         100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN--------RIIHRDVKGNNILLTTEGGVKLVD  171 (291)
T ss_pred             EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHEEEcCCCCEEEee
Confidence            99999999999999875     25689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.........    .....|+..|+|||.+....... ..++.++|||||||++|||++|          ..||...
T Consensus       172 fg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Di~slGvi~~el~~g----------~~p~~~~  236 (291)
T cd06639         172 FGVSAQLTSTRLR----RNTSVGTPFWMAPEVIACEQQYD-YSYDARCDVWSLGITAIELGDG----------DPPLFDM  236 (291)
T ss_pred             cccchhccccccc----ccCccCCccccChhhhcCCCCcc-cccCCccchHHHHHHHHHHhhC----------CCCCCCC
Confidence            9998765432211    12346888999999986542111 1456899999999999999999          6676553


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+    .........  ...+...   ........+.+++.+||+.||++||++.++++
T Consensus       237 ~~----~~~~~~~~~--~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         237 HP----VKTLFKIPR--NPPPTLL---HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             cH----HHHHHHHhc--CCCCCCC---cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            21    112222111  1111111   12234567999999999999999999999886

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG4717|consensus

Probab=100.00  E-value=3.3e-39  Score=307.51  Aligned_cols=245  Identities=22%  Similarity=0.336  Sum_probs=199.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch---HHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW---SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~---~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ..-|.+.+.||+|.|.+|-+|++  +|..||||++.+...+..   ..-.|+.-++.++|||||++|.+..+.    ..+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ----TKl   92 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ----TKL   92 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc----ceE
Confidence            45689999999999999999986  899999999976544332   223455556668999999999998766    569


Q ss_pred             EeeecccCcccHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecC
Q psy14889        210 WLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFG  286 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfG  286 (443)
                      |||+|+-.+|+|++|+  +...+.+....+++.||+.|+.|+|..        .+|||||||+||++-+ -|-+||.|||
T Consensus        93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL--------HVVHRDLKPENVVFFEKlGlVKLTDFG  164 (864)
T KOG4717|consen   93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL--------HVVHRDLKPENVVFFEKLGLVKLTDFG  164 (864)
T ss_pred             EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh--------hhhcccCCcceeEEeeecCceEeeecc
Confidence            9999999999999999  457899999999999999999999988        8899999999997755 4789999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++..+.....     .++.+|+..|-|||++.+..+..     ++.||||||||||-|+.|          +.||++.. 
T Consensus       165 FSNkf~PG~k-----L~TsCGSLAYSAPEILLGDsYDA-----PAVDiWSLGVILyMLVCG----------q~PFqeAN-  223 (864)
T KOG4717|consen  165 FSNKFQPGKK-----LTTSCGSLAYSAPEILLGDSYDA-----PAVDIWSLGVILYMLVCG----------QPPFQEAN-  223 (864)
T ss_pred             ccccCCCcch-----hhcccchhhccCchhhhcCccCC-----cchhhhHHHHHHHHHHhC----------CCcccccc-
Confidence            9976655332     25679999999999999873322     789999999999999999          88888752 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         +.+.+..++.   ....+|     ...+.+.++||..||..||++|.|.++|..
T Consensus       224 ---DSETLTmImD---CKYtvP-----shvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  224 ---DSETLTMIMD---CKYTVP-----SHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             ---chhhhhhhhc---ccccCc-----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence               2233333332   233344     457889999999999999999999999865

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-38  Score=297.50  Aligned_cols=252  Identities=29%  Similarity=0.427  Sum_probs=193.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||.||+|..  +++.+|+|.+....... .....|+..+..++||||+++++++...    ..++++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~l~   78 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR----DKLWIV   78 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC----CEEEEE
Confidence            6899999999999999999987  57889999886543322 2234556666669999999999988765    458999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++++|.+++..  ..+++..+..++.|++.||.|||+.        +|+|+||||+||++++++.+||+|||++..
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~--------~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~  150 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET--------GKIHRDIKGANILLTEDGDVKLADFGVSAQ  150 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCChhhEEECCCCCEEECccccchh
Confidence            999999999998864  5799999999999999999999998        999999999999999999999999999876


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....++..|+|||.+.....   ..++.++||||||+++|||+||          ..||.+..+    
T Consensus       151 ~~~~~~~----~~~~~~~~~y~~Pe~~~~~~~---~~~~~~~Di~slG~~l~~~~tg----------~~p~~~~~~----  209 (262)
T cd06613         151 LTATIAK----RKSFIGTPYWMAPEVAAVERK---GGYDGKCDIWALGITAIELAEL----------QPPMFDLHP----  209 (262)
T ss_pred             hhhhhhc----cccccCCccccCchhhccccc---CCcCchhhhHHHHHHHHHHHhC----------CCCCCCCCH----
Confidence            5432211    123467889999999865422   1455789999999999999999          667765321    


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...... .......+..  .......+.++.+++++||..||.+|||+.+|+.
T Consensus       210 ~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         210 MRALFL-ISKSNFPPPK--LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHH-HHhccCCCcc--ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            111111 1111111111  1112345678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.9e-38  Score=298.13  Aligned_cols=250  Identities=26%  Similarity=0.372  Sum_probs=191.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|+..+.||+|+||.||+|..  ++..||+|.+.....      .....+.|+..+..++||||+++++++.+...  .
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~   79 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE--K   79 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC--C
Confidence            4788899999999999999987  588999998754321      11223456667777999999999998765432  4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++++||+++++|.+++.+ ..+++.....++.|++.||+|||+.        +|+|+||||+||+++.++.+||+|||
T Consensus        80 ~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~--------~i~H~~l~p~nil~~~~~~~~l~dfg  151 (266)
T cd06651          80 TLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN--------MIVHRDIKGANILRDSAGNVKLGDFG  151 (266)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHEEECCCCCEEEccCC
Confidence            57899999999999999865 5689999999999999999999988        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.+...... ........++..|+|||.+.+.      .++.++|||||||++|||++|          ..||.... 
T Consensus       152 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~i~~el~~g----------~~pf~~~~-  213 (266)
T cd06651         152 ASKRLQTICMS-GTGIRSVTGTPYWMSPEVISGE------GYGRKADVWSLGCTVVEMLTE----------KPPWAEYE-  213 (266)
T ss_pred             Ccccccccccc-CCccccCCccccccCHHHhCCC------CCCchhhhHHHHHHHHHHHHC----------CCCccccc-
Confidence            98765432111 1111234588899999998765      667899999999999999999          66776431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ......... .....+.++     ...+..+.+++ +||..+|++||+++||++
T Consensus       214 ---~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         214 ---AMAAIFKIA-TQPTNPQLP-----SHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             ---hHHHHHHHh-cCCCCCCCc-----hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence               122222221 122223333     23456678888 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.1e-38  Score=300.94  Aligned_cols=246  Identities=29%  Similarity=0.466  Sum_probs=194.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..|+..+.||+|+||.||+|.+  ++..||+|++.....  .......|+..+..++||||+++++.+.+.    ..+++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~l   79 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG----TKLWI   79 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC----CEEEE
Confidence            4678889999999999999987  578999998764332  122234456666669999999999998776    46899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++|+|.+++....+++.++..++.|++.||+|||+.        +++|+||+|+||+++.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~--------~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~  151 (277)
T cd06640          80 IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE--------KKIHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             EEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCcCCChhhEEEcCCCCEEEcccccceec
Confidence            99999999999999888899999999999999999999998        9999999999999999999999999999765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....    ......++..|+|||++.+.      .++.++|+||||+++|||+||          ..||....+.    
T Consensus       152 ~~~~~----~~~~~~~~~~y~apE~~~~~------~~~~~~Dv~slG~il~el~tg----------~~p~~~~~~~----  207 (277)
T cd06640         152 TDTQI----KRNTFVGTPFWMAPEVIQQS------AYDSKADIWSLGITAIELAKG----------EPPNSDMHPM----  207 (277)
T ss_pred             cCCcc----ccccccCcccccCHhHhccC------CCccHHHHHHHHHHHHHHHHC----------CCCCCCcChH----
Confidence            43221    11234678899999998765      566899999999999999999          6666543211    


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       .....+ .....+.+     ...++..+.+++.+||+.+|++||++.++++.
T Consensus       208 -~~~~~~-~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         208 -RVLFLI-PKNNPPTL-----TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             -hHhhhh-hcCCCCCC-----chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence             111111 11111222     23467789999999999999999999999775

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.8e-38  Score=302.72  Aligned_cols=254  Identities=22%  Similarity=0.361  Sum_probs=193.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||++..  ++..||+|.+......  ......|+..+..++||||+++++.+...    ..+++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~l   76 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE----GAVYM   76 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC----CeEEE
Confidence            3688899999999999999998  5899999987643221  12223455556669999999999988765    45899


Q ss_pred             eecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ||||+++++|..++...    .+++..+..++.|++.||.|||+..       +|+|+||||+||+++.++.+||+|||+
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-------~i~H~dl~p~nil~~~~~~~~l~dfg~  149 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH-------NIIHRDVKPTNVLVNGNGQVKLCDFGV  149 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC-------CEeeCCCCHHHEEECCCCCEEEeecCC
Confidence            99999999999998764    7999999999999999999999632       899999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +..+.....      ....|+..|+|||.+.+........++.++|||||||++|||++|          ..||..... 
T Consensus       150 ~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g----------~~pf~~~~~-  212 (286)
T cd06622         150 SGNLVASLA------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG----------RYPYPPETY-  212 (286)
T ss_pred             cccccCCcc------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhC----------CCCCCCcch-
Confidence            876533211      223578899999998665332222457899999999999999999          667654211 


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ......+....  ....+.++     ..++.++.+++.+||+.+|++||++.++++.
T Consensus       213 ~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         213 ANIFAQLSAIV--DGDPPTLP-----SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             hhHHHHHHHHh--hcCCCCCC-----cccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            00111111111  12222333     2366789999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-38  Score=312.95  Aligned_cols=185  Identities=24%  Similarity=0.292  Sum_probs=153.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..+|.+.+.||+|+||.||+|..  ++..||+|+....   ...  .|+..+..++||||+++++++...    ...++|
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~--~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv  135 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTL--IEAMLLQNVNHPSVIRMKDTLVSG----AITCMV  135 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccH--HHHHHHHhCCCCCCcChhheEEeC----CeeEEE
Confidence            35799999999999999999998  4678999974322   222  345555569999999999998876    347899


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||+. |+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++.
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ--------RIIHRDVKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEEecCccccc
Confidence            99996 689988853  5689999999999999999999998        999999999999999999999999999864


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcc
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT  348 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~  348 (443)
                      ......     .....||..|+|||++.+.      .++.++|||||||++|||+++.
T Consensus       207 ~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvvl~ell~~~  253 (357)
T PHA03209        207 PVVAPA-----FLGLAGTVETNAPEVLARD------KYNSKADIWSAGIVLFEMLAYP  253 (357)
T ss_pred             cccCcc-----cccccccccccCCeecCCC------CCCchhhHHHHHHHHHHHHHcC
Confidence            332111     1234689999999999876      6678999999999999999873

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.6e-38  Score=301.23  Aligned_cols=251  Identities=22%  Similarity=0.388  Sum_probs=192.3

Q ss_pred             ccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|+..+.||+|+||.||+|+..       .+.||+|.+......  ......|+..+..++|+||+++++++.+..   
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---   81 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE---   81 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence            67889999999999999999862       457999987554332  122345566666699999999999987653   


Q ss_pred             cEEEeeecccCcccHHHHhccc----------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRT----------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~----------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                       ..++||||+++|+|.+++...          .+++..+..++.|++.||.|||+.        +|+||||||+||+++.
T Consensus        82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~--------~i~H~dlkp~Nili~~  152 (275)
T cd05046          82 -PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA--------RFVHRDLAARNCLVSS  152 (275)
T ss_pred             -cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc--------CcccCcCccceEEEeC
Confidence             469999999999999998642          489999999999999999999998        9999999999999999


Q ss_pred             CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                      ++.++|+|||++........   .......++..|+|||.+.+.      ..+.++||||||+++|||+++.        
T Consensus       153 ~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~~~--------  215 (275)
T cd05046         153 QREVKVSLLSLSKDVYNSEY---YKLRNALIPLRWLAPEAVQED------DFSTKSDVWSFGVLMWEVFTQG--------  215 (275)
T ss_pred             CCcEEEcccccccccCcccc---cccCCceeEEeecChhhhccC------CCCchhhHHHHHHHHHHHHhCC--------
Confidence            99999999999864432111   112334567789999998765      5568999999999999999831        


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                       ..||.+..     ...........  ....+   ....++..+.+++.+||+.||++|||+.++++.|.
T Consensus       216 -~~p~~~~~-----~~~~~~~~~~~--~~~~~---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         216 -ELPFYGLS-----DEEVLNRLQAG--KLELP---VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             -CCCccccc-----hHHHHHHHHcC--CcCCC---CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence             56775432     12222222111  11111   12346678999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-38  Score=300.61  Aligned_cols=246  Identities=30%  Similarity=0.467  Sum_probs=195.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||.|+||.||+|..  +++.||+|.+.....  .....+.|+..+..++|+||+++++++.+.    ..+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~   76 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG----SKLWI   76 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC----CeEEE
Confidence            3688889999999999999987  588999998865431  112334566666679999999999998766    45899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+||+++++|.+++....+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.++|+|||+++.+
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~--------~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  148 (274)
T cd06609          77 IMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE--------GKIHRDIKAANILLSEEGDVKLADFGVSGQL  148 (274)
T ss_pred             EEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEECCCCCEEEcccccceee
Confidence            99999999999999888899999999999999999999998        9999999999999999999999999999877


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....|+..|+|||.+.+.      .++.++||||||+++|||+||          ..||....+     
T Consensus       149 ~~~~~~----~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg----------~~p~~~~~~-----  203 (274)
T cd06609         149 TSTMSK----RNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKG----------EPPLSDLHP-----  203 (274)
T ss_pred             cccccc----cccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhC----------CCCcccCch-----
Confidence            643221    2334688899999999876      567899999999999999999          666654321     


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......+. ....+.++.    ...+..+.+++.+||..||++|||++++++
T Consensus       204 ~~~~~~~~-~~~~~~~~~----~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         204 MRVLFLIP-KNNPPSLEG----NKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHhh-hcCCCCCcc----cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11111111 112222221    125667999999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.8e-38  Score=297.09  Aligned_cols=250  Identities=27%  Similarity=0.372  Sum_probs=191.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|++.+.||+|+||.||+|..  ++..||||.+......      ....+.|+..+..++||||+++++++.+...  .
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~   79 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME--R   79 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC--c
Confidence            5789999999999999999987  5889999987532211      1123456677777999999999998766533  3


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++++|||+++|+|.+++.+ ..+++..++.++.|++.||+|||+.        +++|+||||+||+++.++.+||+|||
T Consensus        80 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~Dfg  151 (265)
T cd06652          80 TLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN--------MIVHRDIKGANILRDSVGNVKLGDFG  151 (265)
T ss_pred             eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEecCCCCEEECcCc
Confidence            57899999999999999865 5689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......... .......|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||.... 
T Consensus       152 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g----------~~p~~~~~-  213 (265)
T cd06652         152 ASKRLQTICLSG-TGMKSVTGTPYWMSPEVISGE------GYGRKADIWSVGCTVVEMLTE----------KPPWAEFE-  213 (265)
T ss_pred             cccccccccccc-cccccCCCCccccChhhhcCC------CCCcchhHHHHHHHHHHHhhC----------CCCCCccc-
Confidence            987654321111 112334688999999998765      566899999999999999999          66765431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ......... .....+..|     ...+..+.+++.+||. +|++||+++++++
T Consensus       214 ---~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         214 ---AMAAIFKIA-TQPTNPVLP-----PHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             ---hHHHHHHHh-cCCCCCCCc-----hhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence               112222221 111222222     3355678899999995 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.5e-38  Score=307.85  Aligned_cols=193  Identities=26%  Similarity=0.374  Sum_probs=151.4

Q ss_pred             cceeeeecCeEEEEEEE----CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        141 SECIGKGRYGEVWRGVW----HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      ..+||+|+||.||+|..    +++.||+|.+..... ......|+..+..++||||+++++++.....  ..++++|||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHAD--RKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCC--cEEEEEEecc
Confidence            46799999999999986    357899998854332 2223445566666999999999998865443  4589999998


Q ss_pred             CcccHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----cCCCcEEE
Q psy14889        217 SFGSLYDHLNR----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVI  282 (443)
Q Consensus       217 ~~gsL~~~l~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----~~~~~~kl  282 (443)
                      . ++|.+++..          ..+++..+..++.||+.||.|||+.        +|+||||||+|||+    +.++.+||
T Consensus        83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--------~ivHrDlkp~Nil~~~~~~~~~~~kl  153 (317)
T cd07868          83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--------WVLHRDLKPANILVMGEGPERGRVKI  153 (317)
T ss_pred             C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC--------CEEcCCCCHHHEEEecCCCCcCcEEE
Confidence            7 488887742          2488999999999999999999998        99999999999999    45678999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +|||+++........ ........||+.|+|||++.+..     .++.++|||||||++|||++|++++
T Consensus       154 ~DfG~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         154 ADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGAR-----HYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             eecCceeccCCCCcc-ccccCCccccccccCCHHHcCCC-----CcCchhhHHHHHHHHHHHHhCCCCc
Confidence            999999776533211 11123457899999999987642     4568999999999999999996554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-38  Score=299.37  Aligned_cols=257  Identities=26%  Similarity=0.401  Sum_probs=196.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCC--cccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRN--SCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~--~~~~~  209 (443)
                      .++|++.+.||+|+||.||+|..  +++.+++|++..........+.|+..+..+ +|+||+++++++.....  ....+
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            47899999999999999999998  578899998876544333445566555556 79999999999876542  23568


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||+++++|.+++..     ..+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~--------~i~H~~l~p~ni~~~~~~~~~l~d  156 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN--------KVIHRDIKGQNILLTKNAEVKLVD  156 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCHHHEEEccCCeEEECC
Confidence            999999999999998853     4689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.........    .....|+..|+|||.+....... ..++.++||||||+++|||++|          ..||...
T Consensus       157 ~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Dv~slG~il~~l~~g----------~~p~~~~  221 (275)
T cd06608         157 FGVSAQLDSTLGR----RNTFIGTPYWMAPEVIACDEQPD-ASYDARSDVWSLGITAIELADG----------KPPLCDM  221 (275)
T ss_pred             Cccceecccchhh----hcCccccccccCHhHhccccccc-CCccccccHHHhHHHHHHHHhC----------CCCcccc
Confidence            9998765432221    12346889999999986542211 2566899999999999999999          6676543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..    .........  ...+...   .....+..+.+++.+||..||++|||+.++++
T Consensus       222 ~~----~~~~~~~~~--~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         222 HP----MRALFKIPR--NPPPTLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             ch----HHHHHHhhc--cCCCCCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            11    112222111  1111111   12235568999999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.3e-38  Score=300.66  Aligned_cols=245  Identities=24%  Similarity=0.431  Sum_probs=187.1

Q ss_pred             ceeeeecCeEEEEEEECC--------ceeEEEEeeccC--ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        142 ECIGKGRYGEVWRGVWHG--------ENVAVKIFFSRD--EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~--------~~vAvK~~~~~~--~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.||+|+||.||+|+...        ..+|+|.+....  ........|+..+..++||||+++++++....    ..++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~   76 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE----PQYI   76 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC----CeEE
Confidence            368999999999998732        579999875432  12223345666667799999999999987663    4799


Q ss_pred             eecccCcccHHHHhcc--------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-----
Q psy14889        212 VTHYHSFGSLYDHLNR--------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-----  278 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-----  278 (443)
                      ||||+++|+|.+++.+        ..+++.+++.++.|++.||.|||+.        +++|+||||+||+++.++     
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~H~dl~p~nil~~~~~~~~~~  148 (269)
T cd05044          77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM--------HFIHRDLAARNCLVSEKGYDADR  148 (269)
T ss_pred             EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC--------CcccCCCChheEEEecCCCCCCc
Confidence            9999999999999853        2378899999999999999999988        999999999999999887     


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCccccc
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEY  357 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~  357 (443)
                      .+||+|||+++.........  ......++..|+|||.+.++      .++.++||||||+++|||++ |          
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~ellt~g----------  210 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYR--KEGEGLLPVRWMAPESLLDG------KFTTQSDVWSFGVLMWEILTLG----------  210 (269)
T ss_pred             ceEECCcccccccccccccc--cCcccCCCccccCHHHHccC------CcccchhHHHHHHHHHHHHHcC----------
Confidence            89999999987654321111  11223456789999999876      66789999999999999998 7          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      ..||...     ........+.. ......+     ...+..+.+++.+||..+|++||+++++++.|++
T Consensus       211 ~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         211 QQPYPAL-----NNQEVLQHVTA-GGRLQKP-----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             CCCCccc-----CHHHHHHHHhc-CCccCCc-----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            6676543     11222222211 1122222     3467789999999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.6e-38  Score=301.73  Aligned_cols=252  Identities=24%  Similarity=0.385  Sum_probs=191.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.|++.+.||+|+||.||+|+.  ++..||+|.+....... .....|+..+..++||||+++++.+...    ..+++|
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv   87 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD----GKLWIM   87 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----CeEEEE
Confidence            6799999999999999999988  47899999886544322 2223455566669999999999998765    458999


Q ss_pred             ecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++++|..++.  ...+++..+..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++..
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  159 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM--------KIIHRDLKAGNVLLTLDGDIKLADFGVSAK  159 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC--------CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999988875  35689999999999999999999988        999999999999999999999999999865


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....++..|+|||++.+..... ..++.++|||||||++|||++|          ..||....+    
T Consensus       160 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Dv~slG~il~el~~g----------~~p~~~~~~----  220 (292)
T cd06644         160 NVKTLQR----RDSFIGTPYWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQI----------EPPHHELNP----  220 (292)
T ss_pred             ccccccc----cceecCCccccCceeeccccccC-CCCCchhhhHhHHHHHHHHhcC----------CCCCccccH----
Confidence            4322111    12346788999999986432111 1466899999999999999999          666654311    


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .....+..  ....+...   .+...+.++.+++.+||+.||++||++.++++
T Consensus       221 ~~~~~~~~--~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         221 MRVLLKIA--KSEPPTLS---QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHHHHHh--cCCCccCC---CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            11122221  11111111   12335567999999999999999999999976

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.4e-38  Score=303.21  Aligned_cols=252  Identities=23%  Similarity=0.326  Sum_probs=185.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||+|..  ++..||+|.+......   ......|+..+..++||||+++++++...    ..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~   76 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE----SRLYL   76 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC----CeEEE
Confidence            477889999999999999987  5889999987543221   12334566666679999999999998765    45799


Q ss_pred             eecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ||||++ ++|.+++..    ..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||+
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~dfg~  147 (285)
T cd07861          77 IFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR--------RVLHRDLKPQNLLIDNKGVIKLADFGL  147 (285)
T ss_pred             EEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC--------CeeecCCCHHHEEEcCCCcEEECcccc
Confidence            999998 689888753    4689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........    .....+++.|+|||.+.+..     .++.++||||||+++|||+||+          .||......
T Consensus       148 ~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~il~~l~tg~----------~~~~~~~~~  208 (285)
T cd07861         148 ARAFGIPVRV----YTHEVVTLWYRAPEVLLGSP-----RYSTPVDIWSIGTIFAEMATKK----------PLFHGDSEI  208 (285)
T ss_pred             eeecCCCccc----ccCCcccccccChHHhcCCC-----CcCcHHHHHHHHHHHHHHHHCC----------CCCCCCCHH
Confidence            8755432111    12335788999999886542     3567899999999999999994          444332100


Q ss_pred             --------------------CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 --------------------DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                                          ............. ........  .....+.++.+++++||+.||++|||+.+|++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         209 DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPK-WKKGSLRS--AVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHHHHhCCCChhhhhcchhhHHHHhhccc-cCcchhHH--hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                                0000000000000 00000000  01225567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-38  Score=301.41  Aligned_cols=253  Identities=25%  Similarity=0.423  Sum_probs=194.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||.||++.+  ++..||+|.......... ....|+..+..++||||+++++.+...    ..+++|
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv   80 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----NKLWIL   80 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----CeEEEE
Confidence            6799999999999999999988  578999998865433221 233455666669999999999998765    457999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+|+||||+||+++.++.++|+|||++..
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~--------~i~h~dl~p~nili~~~~~~~l~d~g~~~~  152 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH--------KVIHRDLKAGNILLTLDGDVKLADFGVSAK  152 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCChhhEEECCCCCEEEccCccchh
Confidence            999999999999864  4699999999999999999999998        999999999999999999999999999865


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....|+..|+|||.+....... ..++.++||||||+++|||++|          ..||.....    
T Consensus       153 ~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~-~~~~~~sDi~slG~il~~l~~g----------~~p~~~~~~----  213 (280)
T cd06611         153 NKSTLQK----RDTFIGTPYWMAPEVVACETFKD-NPYDYKADIWSLGITLIELAQM----------EPPHHELNP----  213 (280)
T ss_pred             hcccccc----cceeecchhhcCHHHHhhcccCC-CCCCccccHHHHHHHHHHHHhC----------CCCcccCCH----
Confidence            4332211    12346889999999986432111 1456799999999999999999          667765311    


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...+.+..  ....+.+.   .+...+.++.+++.+||+.||.+|||+.++++.
T Consensus       214 ~~~~~~~~--~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         214 MRVLLKIL--KSEPPTLD---QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHh--cCCCCCcC---CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            11222221  11111111   122355679999999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.6e-38  Score=297.41  Aligned_cols=248  Identities=28%  Similarity=0.411  Sum_probs=192.5

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----------hHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----------WSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----------~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      +|.+...||+|+||.||+|..  +++.+|+|.+.......          ...+.|+..+..++||||+++++++...  
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   78 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA--   78 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence            367788999999999999987  57899999875432211          1224566666679999999999998765  


Q ss_pred             cccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                        ...++||||+++++|.+++.. ..+++..+..++.|++.||+|||+.        +++||||+|+||++++++.+||+
T Consensus        79 --~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~--------~ivH~di~p~nil~~~~~~~~l~  148 (267)
T cd06628          79 --DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR--------GIIHRDIKGANILVDNKGGIKIS  148 (267)
T ss_pred             --CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc--------CcccccCCHHHEEEcCCCCEEec
Confidence              357899999999999999965 5689999999999999999999998        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCC--CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        284 DFGLAVSYSQLSNKMD--IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       284 DfGla~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |||+++..........  .......|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~  212 (267)
T cd06628         149 DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT------SYTRKADIWSLGCLVVEMLTG----------KHPF  212 (267)
T ss_pred             ccCCCcccccccccCCccccccccCCCcCccChhHhccC------CCCchhhhHHHHHHHHHHhhC----------CCCC
Confidence            9999977653221111  111234588899999998765      566899999999999999999          6677


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+..    ....+....  ....+.++     ...+..+.+++++||+.||.+||++.++++
T Consensus       213 ~~~~----~~~~~~~~~--~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         213 PDCT----QLQAIFKIG--ENASPEIP-----SNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCcc----HHHHHHHHh--ccCCCcCC-----cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            6531    112222211  12233333     235678999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.3e-38  Score=309.85  Aligned_cols=196  Identities=22%  Similarity=0.361  Sum_probs=153.2

Q ss_pred             ccceeeee--cCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        140 LSECIGKG--RYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       140 ~~~~lG~G--~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.++||+|  +||+||++..  +|+.||+|++.....   .......|+..+..++||||+++++++...    ...++|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~----~~~~lv   77 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD----NELWVV   77 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC----CEEEEE
Confidence            46789999  7889999987  689999999865322   112223455566668999999999999776    457999


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++|+|.+++..   ..+++..++.++.|++.||+|||+.        +|+||||||+|||++.++.++++||+.+.
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~iiH~dlkp~Nil~~~~~~~~l~~~~~~~  149 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM--------GYVHRSVKASHILISVDGKVYLSGLRSNL  149 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCChhhEEEecCCcEEEcccchhh
Confidence            999999999999853   4589999999999999999999998        99999999999999999999999998754


Q ss_pred             cccccCCcC---CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        290 SYSQLSNKM---DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       290 ~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      .........   ........++..|+|||++.+...    .++.++|||||||++|||++|+.|+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----~~~~~~DiwslG~il~el~~g~~pf  210 (327)
T cd08227         150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQ----GYDAKSDIYSVGITACELANGHVPF  210 (327)
T ss_pred             ccccccccccccccccccccceecccChHHhhcccC----CCCchhhHHHHHHHHHHHHHCCCCC
Confidence            432211110   001122356788999999875311    4668999999999999999995443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.3e-38  Score=304.94  Aligned_cols=248  Identities=26%  Similarity=0.407  Sum_probs=192.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.|.....||+|+||.||++..  ++..||||.+...... ......|+..+..++|+||+++++.+...    ...++|
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~lv   97 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG----DELWVV   97 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC----CeEEEE
Confidence            4555567899999999999987  5889999987543322 12234566666679999999999988765    457999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |||+++++|.+++....+++.++..++.||+.||+|||+.        +|+||||||+||++++++.+||+|||++....
T Consensus        98 ~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~--------~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (292)
T cd06658          98 MEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ--------GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS  169 (292)
T ss_pred             EeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence            9999999999999888899999999999999999999998        99999999999999999999999999987554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||....    ...
T Consensus       170 ~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slGvil~el~~g----------~~p~~~~~----~~~  225 (292)
T cd06658         170 KEVPK----RKSLVGTPYWMAPEVISRL------PYGTEVDIWSLGIMVIEMIDG----------EPPYFNEP----PLQ  225 (292)
T ss_pred             ccccc----CceeecCccccCHHHHccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC----HHH
Confidence            32211    1334688999999998765      567899999999999999999          66665431    112


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .+.....  ...+..+.   ....+..+.+++.+||..||++|||+.++++.
T Consensus       226 ~~~~~~~--~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         226 AMRRIRD--NLPPRVKD---SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHh--cCCCcccc---ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            2222111  11111111   12345679999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.5e-38  Score=293.40  Aligned_cols=245  Identities=24%  Similarity=0.382  Sum_probs=191.0

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++..  +++.||+|.+......   ....+.|+..+..++|+|++++++.+....   ..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED---GLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC---CEEEE
Confidence            478899999999999999987  5788999988643221   122345666666799999999998765432   35799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|||+++++|.+++..   ..+++.++..++.|++.||+|||+.        +++|+||||+||+++.++.++|+|||++
T Consensus        78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~--------~i~H~di~p~nil~~~~~~~~l~df~~~  149 (257)
T cd08223          78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK--------HILHRDLKTQNVFLTRTNIIKVGDLGIA  149 (257)
T ss_pred             EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCchhEEEecCCcEEEecccce
Confidence            9999999999999864   4589999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........    ......|++.|+|||.+.+.      .++.++||||||+++|||++|          ..||...    
T Consensus       150 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~~~~~~----  205 (257)
T cd08223         150 RVLENQCD----MASTLIGTPYYMSPELFSNK------PYNYKSDVWALGCCVYEMATL----------KHAFNAK----  205 (257)
T ss_pred             EEecccCC----ccccccCCcCccChhHhcCC------CCCchhhhHHHHHHHHHHHcC----------CCCCCCC----
Confidence            76643221    12334688999999998776      566899999999999999999          5566432    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .......... ....+..+     ...+..+.+++.+||+.||++|||+.++++
T Consensus       206 -~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         206 -DMNSLVYRII-EGKLPPMP-----KDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             -CHHHHHHHHH-hcCCCCCc-----cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             1122221111 12222222     335678999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=5.3e-38  Score=294.40  Aligned_cols=245  Identities=25%  Similarity=0.332  Sum_probs=192.7

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|+..+.||+|+||.||.++.  +++.+++|.+....   ........|+..+..++|+||+++++++.+.    ..+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~   76 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD----NTLLI   76 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC----CeEEE
Confidence            478899999999999988876  68899999875432   1122234566666679999999999998776    45899


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|||+++|+|.+++.+   ..+++.++..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||++
T Consensus        77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~dl~p~ni~~~~~~~~kl~d~~~~  148 (256)
T cd08221          77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA--------GILHRDIKTLNIFLTKAGLIKLGDFGIS  148 (256)
T ss_pred             EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCChHhEEEeCCCCEEECcCcce
Confidence            9999999999999965   3589999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........    ......|+..|+|||.+.+.      ..+.++||||||+++|||++|          ..||....   
T Consensus       149 ~~~~~~~~----~~~~~~~~~~y~ape~~~~~------~~~~~~Dv~slG~i~~~l~~g----------~~~~~~~~---  205 (256)
T cd08221         149 KILGSEYS----MAETVVGTPYYMSPELCQGV------KYNFKSDIWALGCVLYELLTL----------KRTFDATN---  205 (256)
T ss_pred             EEcccccc----cccccCCCccccCHhhcCCC------CCCCcchhHHHHHHHHHHHHC----------CCCCCCCC---
Confidence            76644331    12345688999999998765      556789999999999999999          55665421   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       ..+...... . ......+     ...+.++.+++.+||+.||.+|||+.++++.
T Consensus       206 -~~~~~~~~~-~-~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         206 -PLNLVVKIV-Q-GNYTPVV-----SVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             -HHHHHHHHH-c-CCCCCCc-----cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence             112222222 1 1111111     3356789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0200|consensus

Probab=100.00  E-value=1.2e-38  Score=331.56  Aligned_cols=261  Identities=22%  Similarity=0.404  Sum_probs=203.5

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeee
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      .+...++..+.+.||+|.||.|++|...         ...||||.++.....    ....|.+++... .+|+||+.++|
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~-g~H~niv~llG  369 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKEL-GKHPNIVNLLG  369 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHh-cCCcchhhhee
Confidence            3444566677789999999999999863         246999988654333    223344444432 57999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcccC-----------------CCHHHHHHHHHHHHHHHHHHHHchhcCCCCC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----------------LNHHQMMKICLSIVNGLVHLHTEIFGTQGKP  260 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~  260 (443)
                      +|...    ..+++|+||+..|+|.++|+..+                 ++....+.++.|||.||+||++.        
T Consensus       370 ~~t~~----~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~--------  437 (609)
T KOG0200|consen  370 ACTQD----GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV--------  437 (609)
T ss_pred             eeccC----CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC--------
Confidence            99884    45799999999999999997655                 99999999999999999999999        


Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHH
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV  340 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvv  340 (443)
                      ++|||||.++|||+..+..+||+|||+|+................ -...|||||.+...      .++.|||||||||+
T Consensus       438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~------~ft~kSDVWSfGI~  510 (609)
T KOG0200|consen  438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDR------VFTSKSDVWSFGIL  510 (609)
T ss_pred             CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccC------cccccchhhHHHHH
Confidence            899999999999999999999999999986554332211101101 23469999999886      78899999999999


Q ss_pred             HHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        341 LWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       341 l~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      |||++|.         +..||.+..    ...++.+ ....+.+...|     ..|+++++++|+.||+.+|++||++.+
T Consensus       511 L~EifsL---------G~~PYp~~~----~~~~l~~-~l~~G~r~~~P-----~~c~~eiY~iM~~CW~~~p~~RP~F~~  571 (609)
T KOG0200|consen  511 LWEIFTL---------GGTPYPGIP----PTEELLE-FLKEGNRMEQP-----EHCSDEIYDLMKSCWNADPEDRPTFSE  571 (609)
T ss_pred             HHHHhhC---------CCCCCCCCC----cHHHHHH-HHhcCCCCCCC-----CCCCHHHHHHHHHHhCCCcccCCCHHH
Confidence            9999986         478887742    1233333 33445566655     347889999999999999999999999


Q ss_pred             HHHHHHHHhh
Q psy14889        421 VKKTLIKLAC  430 (443)
Q Consensus       421 vl~~L~~l~~  430 (443)
                      +.+.++.+..
T Consensus       572 ~~~~~~~~l~  581 (609)
T KOG0200|consen  572 CVEFFEKHLQ  581 (609)
T ss_pred             HHHHHHHHHH
Confidence            9999999643

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.3e-38  Score=315.58  Aligned_cols=255  Identities=22%  Similarity=0.275  Sum_probs=189.6

Q ss_pred             hhccccccceeeeecCeEEEEEEEC----CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ...+|.+.+.||+|+||.||++...    +..||+|.+....  .  .+.|+..+..++||||+++++++...    ..+
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~--~~~E~~il~~l~h~~iv~~~~~~~~~----~~~  161 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--T--PGREIDILKTISHRAIINLIHAYRWK----STV  161 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--c--HHHHHHHHHhcCCCCccceeeeEeeC----CEE
Confidence            3467999999999999999999763    4679999875432  2  23455556669999999999988765    457


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++|||++. ++|.+++. ...+++.+++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~--------givHrDlkp~Nill~~~~~~~l~DfG~a  232 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR--------GIIHRDVKTENIFLDEPENAVLGDFGAA  232 (392)
T ss_pred             EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEEcCCCCEEEccCccc
Confidence            99999986 68888885 36799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+......  .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.....
T Consensus       233 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~el~~g----------~~pf~~~~~~~  294 (392)
T PHA03207        233 CKLDAHPDT--PQCYGWSGTLETNSPELLALD------PYCAKTDIWSAGLVLFEMSVK----------NVTLFGKQVKS  294 (392)
T ss_pred             cccCccccc--ccccccccccCccCHhHhcCC------CCCchhhHHHHHHHHHHHHHC----------CCCCCCCCCCC
Confidence            765543221  112345799999999999876      677899999999999999999          44544322111


Q ss_pred             CChHHHHhhhhhc------------------------CCCC--CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        369 PSFDDMRKVICID------------------------QQRP--VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       369 ~~~~~~~~~~~~~------------------------~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                       ....+...+...                        ..++  ..+........+.++.++|.+||..||++|||+.|++
T Consensus       295 -~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l  373 (392)
T PHA03207        295 -SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDIL  373 (392)
T ss_pred             -cHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHh
Confidence             111111111100                        0011  1111111122456788999999999999999999998


Q ss_pred             HH
Q psy14889        423 KT  424 (443)
Q Consensus       423 ~~  424 (443)
                      ..
T Consensus       374 ~~  375 (392)
T PHA03207        374 SL  375 (392)
T ss_pred             hC
Confidence            74

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.5e-38  Score=296.90  Aligned_cols=238  Identities=21%  Similarity=0.376  Sum_probs=180.5

Q ss_pred             ceeeeecCeEEEEEEEC--C----------ceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        142 ECIGKGRYGEVWRGVWH--G----------ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~--~----------~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +.||+|+||.||+|.+.  +          ..|++|.+............|+..+..++||||+++++++.. ..    .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~----~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DE----N   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CC----c
Confidence            46899999999999984  2          247888765544323333455556666999999999999876 22    4


Q ss_pred             EeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-------cE
Q psy14889        210 WLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-------TC  280 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-------~~  280 (443)
                      ++||||+++|+|.+++...  .+++..++.++.||+.||.|||+.        +|+||||||+|||++.++       .+
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~dlkp~Nill~~~~~~~~~~~~~  147 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK--------KLVHGNVCGKNILVARYGLNEGYVPFI  147 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC--------CeecccCccceEEEecCccccCCceeE
Confidence            8999999999999999653  589999999999999999999998        999999999999999888       79


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||++......        ....++..|+|||++.+..    ..++.++||||||+++|||++|.         ..|
T Consensus       148 kl~Dfg~a~~~~~~--------~~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~~~~~l~~~~---------~~p  206 (259)
T cd05037         148 KLSDPGIPITVLSR--------EERVERIPWIAPECIRNGQ----ASLTIAADKWSFGTTLLEICSNG---------EEP  206 (259)
T ss_pred             EeCCCCcccccccc--------cccccCCCccChhhhcCCC----CCcchhhHHHHHHHHHHHHHhCC---------CCC
Confidence            99999998765431        1235667899999987642    14568999999999999999951         556


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      |.....     ......... ......+       ....+.+++.+||..+|.+|||+.++++.|+
T Consensus       207 ~~~~~~-----~~~~~~~~~-~~~~~~~-------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         207 LSTLSS-----SEKERFYQD-QHRLPMP-------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             cccCCc-----hhHHHHHhc-CCCCCCC-------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            655321     111111111 1111111       1257899999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=9.3e-38  Score=295.13  Aligned_cols=254  Identities=22%  Similarity=0.332  Sum_probs=178.3

Q ss_pred             eeeeecCeEEEEEEE-CC---ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        143 CIGKGRYGEVWRGVW-HG---ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~-~~---~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      .||+|+||.||+|.. ++   ..+++|.+......  ......|+..+..++||||+++++.+....    ..++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~lv~e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI----PYLLVFEYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC----ccEEEEecC
Confidence            589999999999976 33   24566665433221  112234444455589999999999988763    479999999


Q ss_pred             CcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        217 SFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       217 ~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ++|+|.+++++     ..+++..+..++.||+.||+|||+.        +++||||||+|||++.++.+||+|||++...
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~--------~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~  149 (268)
T cd05086          78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH--------NFLHSDLALRNCFLTSDLTVKVGDYGIGPSR  149 (268)
T ss_pred             CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC--------CeeccCCccceEEEcCCccEEeccccccccc
Confidence            99999999964     2356677889999999999999998        9999999999999999999999999998543


Q ss_pred             cccCCcCCCCCCCcccccCccccccccccccc-CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINM-DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .....  ........|+..|+|||++...... ....++.++||||||+++|||+++.         ..||....    .
T Consensus       150 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~---------~~p~~~~~----~  214 (268)
T cd05086         150 YKEDY--IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA---------AQPYSHLS----D  214 (268)
T ss_pred             Ccchh--hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC---------CCCCCCCC----H
Confidence            21110  0111234678899999998642111 1124568999999999999999752         44664421    1


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      .+.+........  ..++.........+.+.+++..|| .+|++||++++|++.|.
T Consensus       215 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         215 REVLNHVIKDQQ--VKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHHHhhcc--cccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            122222222111  111111112235567899999999 67999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=6.3e-38  Score=294.69  Aligned_cols=247  Identities=24%  Similarity=0.360  Sum_probs=193.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||.|+||.||++..  ++..||+|.+.......   .....|+..+..++||||+++++++.....  ..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~~   78 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSN--QTLYI   78 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCC--CEEEE
Confidence            477889999999999999987  57899999886433221   122346666667999999999998765433  45799


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH-----HchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLH-----TEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH-----~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                      +|||+++++|.+++..     ..+++..++.++.|++.||.|||     +.        +++|+||||+||++++++.+|
T Consensus        79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~--------~i~h~dl~p~nili~~~~~~k  150 (265)
T cd08217          79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN--------TVLHRDLKPANIFLDANNNVK  150 (265)
T ss_pred             EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC--------cceecCCCHHHEEEecCCCEE
Confidence            9999999999999853     56899999999999999999999     66        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||++.........    .....|+..|+|||.+...      .++.++|+||||+++|+|++|          ..||
T Consensus       151 l~d~g~~~~~~~~~~~----~~~~~~~~~~~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~  210 (265)
T cd08217         151 LGDFGLAKILGHDSSF----AKTYVGTPYYMSPEQLNHM------SYDEKSDIWSLGCLIYELCAL----------SPPF  210 (265)
T ss_pred             EecccccccccCCccc----ccccccCCCccChhhhcCC------CCCchhHHHHHHHHHHHHHHC----------CCcc
Confidence            9999999876543221    1234688999999998765      566899999999999999999          6666


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...     ....+.+.+.. ...+.++     ...+..+.+++.+||+.+|++|||+.+|++.
T Consensus       211 ~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         211 TAR-----NQLQLASKIKE-GKFRRIP-----YRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cCc-----CHHHHHHHHhc-CCCCCCc-----cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            543     12333333322 1222222     3356789999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.3e-38  Score=295.50  Aligned_cols=246  Identities=29%  Similarity=0.493  Sum_probs=192.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      ++|++.+.||+|+||.||+|..  ++..+|+|.+..... ......|+..+..++||||+++++.+...    ..+++++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKN----TDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecC----CcEEEEE
Confidence            6799999999999999999998  378999998865432 23334566666668999999999998776    4579999


Q ss_pred             cccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+++++|.+++.  ...+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||++...
T Consensus        78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~--------~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~  149 (256)
T cd06612          78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN--------KKIHRDIKAGNILLNEEGQAKLADFGVSGQL  149 (256)
T ss_pred             ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCcceEEECCCCcEEEcccccchhc
Confidence            9999999999985  35689999999999999999999998        9999999999999999999999999998766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....|+..|+|||++.+.      .++.++||||||+++|||++|          ..||....+.    
T Consensus       150 ~~~~~~----~~~~~~~~~y~~PE~~~~~------~~~~~~Di~s~G~il~~l~~g----------~~p~~~~~~~----  205 (256)
T cd06612         150 TDTMAK----RNTVIGTPFWMAPEVIQEI------GYNNKADIWSLGITAIEMAEG----------KPPYSDIHPM----  205 (256)
T ss_pred             ccCccc----cccccCCccccCHHHHhcC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCcchh----
Confidence            543211    1234578899999998776      667899999999999999999          5565543211    


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ........  ...+...   .+...+..+.+++.+||+.||++|||+.|+++
T Consensus       206 ~~~~~~~~--~~~~~~~---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         206 RAIFMIPN--KPPPTLS---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hhhhhhcc--CCCCCCC---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            11111100  0111111   12234567999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0584|consensus

Probab=100.00  E-value=1.6e-39  Score=318.00  Aligned_cols=245  Identities=26%  Similarity=0.433  Sum_probs=193.4

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEe-----eccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~-----~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..+..+||+|+|-+||+|.+  +|..||=-.+     ..........-.|+..++.|+|||||+++.++.+..+  ..+-
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in  119 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTIN  119 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC--ceee
Confidence            35678999999999999988  4666652221     1112211222345666666999999999999998876  5688


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGla  288 (443)
                      +|+|.+..|+|..|+++ +.++.+.+..|++||++||.|||++      .|+|||||||.+||+|+.+ |.|||+|+|||
T Consensus       120 ~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~------~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ------DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA  193 (632)
T ss_pred             eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC------CCCccccccccceEEEcCCcCceeecchhHH
Confidence            99999999999999976 6799999999999999999999998      8899999999999999766 79999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........      ....|||.|||||++..       .|...+||||||+.|+||+|+          .+||.+-.   
T Consensus       194 tl~r~s~a------ksvIGTPEFMAPEmYEE-------~YnE~VDVYaFGMCmLEMvT~----------eYPYsEC~---  247 (632)
T KOG0584|consen  194 TLLRKSHA------KSVIGTPEFMAPEMYEE-------NYNELVDVYAFGMCMLEMVTS----------EYPYSECT---  247 (632)
T ss_pred             HHhhcccc------ceeccCccccChHHHhh-------hcchhhhhhhhhHHHHHHHhc----------cCChhhhC---
Confidence            87764332      23589999999999985       566899999999999999999          99998753   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ....+.+.+........+...     -..+++++|.+|+.. .++|||+.|+|+
T Consensus       248 -n~AQIYKKV~SGiKP~sl~kV-----~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  248 -NPAQIYKKVTSGIKPAALSKV-----KDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             -CHHHHHHHHHcCCCHHHhhcc-----CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence             334555555433322222211     135799999999999 999999999986

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.2e-37  Score=297.49  Aligned_cols=255  Identities=22%  Similarity=0.300  Sum_probs=191.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|...+.||.|++|.||++..  +++.+|+|.+......  ......|+..+..++||||+++++++.....  ..+++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~~~l   78 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS--SSIGI   78 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC--CeEEE
Confidence            3678889999999999999998  5789999988654321  1222345566666999999999999865543  45799


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ||||+++++|.+++..     ..+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|||
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~--------~i~H~dl~~~nil~~~~~~~~l~dfg  150 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR--------KIIHRDIKPSNILLTRKGQVKLCDFG  150 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEecCCeEEEeecc
Confidence            9999999999988742     4588999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++........      ....++..|+|||.+.+.      .++.++||||||+++|||++|          ..||.....
T Consensus       151 ~~~~~~~~~~------~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~~  208 (287)
T cd06621         151 VSGELVNSLA------GTFTGTSFYMAPERIQGK------PYSITSDVWSLGLTLLEVAQN----------RFPFPPEGE  208 (287)
T ss_pred             cccccccccc------ccccCCccccCHHHhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCcccC
Confidence            9865432211      123577899999998765      667899999999999999999          555544311


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCC-CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWV-SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......+....+. ....+.++.... ....++.+.+++.+||+.||++|||+.|+++
T Consensus       209 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         209 PPLGPIELLSYIV-NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCCChHHHHHHHh-cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            1111122222221 112222221111 1224678999999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1024|consensus

Probab=100.00  E-value=6.8e-39  Score=296.59  Aligned_cols=257  Identities=21%  Similarity=0.316  Sum_probs=204.0

Q ss_pred             ccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++++..++-+|.||.||+|.|.       .+.|-||.++....+-  ...-.|-+.+..+.|||+..+.+++.....  
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~--  361 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA--  361 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC--
Confidence            56888889999999999999773       2456777664433221  122345555555789999999999877543  


Q ss_pred             cEEEeeecccCcccHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR---------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                       ..++++.++..|+|..||..         +.++..+...++.|++.|++|||.+        ++||.||.++|++||+.
T Consensus       362 -~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~--------~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  362 -TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH--------GVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             -cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc--------Ccccchhhhhcceehhh
Confidence             35888999999999999962         4578889999999999999999999        99999999999999999


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      .++||+|-.+++.+-....  ..-.........||+||.+...      .|+.++|||||||+||||+|-         +
T Consensus       433 LqVkltDsaLSRDLFP~DY--hcLGDnEnRPvkWMslEal~n~------~yssasDvWsfGVllWELmtl---------g  495 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDY--HCLGDNENRPVKWMSLEALQNS------HYSSASDVWSFGVLLWELMTL---------G  495 (563)
T ss_pred             eeEEeccchhccccCcccc--cccCCCCCCcccccCHHHHhhh------hhcchhhhHHHHHHHHHHHhc---------C
Confidence            9999999999987654322  2222233455789999999987      788999999999999999985         3


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      +.||.+..     ..++...+ .++.+...|     .+||+++..+|..||..+|++||++.|+...|.+...+
T Consensus       496 ~~PyaeID-----PfEm~~yl-kdGyRlaQP-----~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  496 KLPYAEID-----PFEMEHYL-KDGYRLAQP-----FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             CCCccccC-----HHHHHHHH-hccceecCC-----CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence            88998873     34555554 345555444     45999999999999999999999999999999988754

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=8e-38  Score=296.01  Aligned_cols=254  Identities=22%  Similarity=0.357  Sum_probs=190.4

Q ss_pred             ccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCc--cc
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNS--CT  207 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~--~~  207 (443)
                      |.+.+.||+|+||.||+|.+     ++..||||++.......   .....|+..+..++||||+++++++......  ..
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            56678999999999999986     25789999886543221   1223456666679999999999987654322  12


Q ss_pred             EEEeeecccCcccHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                      ..++++||+.+|+|.+++..       ..+++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dikp~nili~~~~~~  152 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK--------NFIHRDLAARNCMLNENMTV  152 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeecccchhhEEEcCCCCE
Confidence            35789999999999988732       2478899999999999999999998        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKA  359 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~  359 (443)
                      ||+|||+++.........  ......++..|++||.+...      .++.++||||||+++|||++ |          ..
T Consensus       153 kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~------~~~~~sDi~slG~il~el~~~g----------~~  214 (273)
T cd05074         153 CVADFGLSKKIYSGDYYR--QGCASKLPVKWLALESLADN------VYTTHSDVWAFGVTMWEIMTRG----------QT  214 (273)
T ss_pred             EECcccccccccCCccee--cCCCccCchhhcCHhHHhcC------ccchhhhhHHHHHHHHHHhhCC----------CC
Confidence            999999997654322111  11223456789999998766      56689999999999999999 5          55


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ||...     ........+.. ......+     ...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       215 p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         215 PYAGV-----ENSEIYNYLIK-GNRLKQP-----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCC-----CHHHHHHHHHc-CCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            66543     11222222211 1111111     23556899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.5e-38  Score=300.14  Aligned_cols=236  Identities=17%  Similarity=0.273  Sum_probs=175.4

Q ss_pred             eeeeecCeEEEEEEEC--------------------------CceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceee
Q psy14889        143 CIGKGRYGEVWRGVWH--------------------------GENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGY  195 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~~--------------------------~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l  195 (443)
                      .||+|+||.||+|.+.                          ...||+|++....... .....++..+..++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5899999999999751                          1348888875433221 111223344455899999999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEE
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL  273 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiL  273 (443)
                      ++++....    ..++||||+++|+|..++.+  ..+++.+++.++.||++||+|||+.        +|+||||||+|||
T Consensus        82 ~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~iiH~dlkp~Nil  149 (274)
T cd05076          82 HGVCVRGS----ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK--------NLVHGNVCAKNIL  149 (274)
T ss_pred             EEEEEeCC----ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC--------CccCCCCCcccEE
Confidence            99987763    46899999999999999854  5689999999999999999999988        9999999999999


Q ss_pred             EcCCC-------cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH-
Q psy14889        274 VKTNG-------TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC-  345 (443)
Q Consensus       274 l~~~~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell-  345 (443)
                      ++..+       .+|++|||++......        ....++..|+|||.+.+..     .++.++||||||+++|||+ 
T Consensus       150 l~~~~~~~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~-----~~~~~~Dv~slG~~l~el~~  216 (274)
T cd05076         150 LARLGLAEGTSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGN-----SLSTAADKWSFGTTLLEICF  216 (274)
T ss_pred             EeccCcccCccceeeecCCccccccccc--------cccccCCcccCchhhcCCC-----CCCcHHHHHHHHHHHHHHHh
Confidence            97654       4899999987543221        1235778899999886531     5668999999999999995 


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      +|          ..||....+     ........   .....+.     .....+.+++.+||+.+|++|||+.+|++.|
T Consensus       217 ~g----------~~p~~~~~~-----~~~~~~~~---~~~~~~~-----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         217 DG----------EVPLKERTP-----SEKERFYE---KKHRLPE-----PSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             CC----------CCCccccCh-----HHHHHHHH---hccCCCC-----CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            56          667655321     11112211   1112221     1234689999999999999999999999887


Q ss_pred             H
Q psy14889        426 I  426 (443)
Q Consensus       426 ~  426 (443)
                      +
T Consensus       274 ~  274 (274)
T cd05076         274 T  274 (274)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3.8e-38  Score=302.40  Aligned_cols=247  Identities=24%  Similarity=0.391  Sum_probs=191.4

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .|.....||+|+||.||++..  +++.||+|.+...... ......|+..+..++||||+++++++...    ...++|+
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~iv~   97 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG----EELWVLM   97 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC----CeEEEEE
Confidence            344556799999999999987  5889999988543322 22234566666669999999999998766    4579999


Q ss_pred             cccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      ||+++++|..++....+++..+..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++..+..
T Consensus        98 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~  169 (297)
T cd06659          98 EFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ--------GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  169 (297)
T ss_pred             ecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence            999999999999888899999999999999999999998        999999999999999999999999999865543


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ....    .....|+..|+|||++.+.      .++.++||||||+++|||++|          ..||....    ....
T Consensus       170 ~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g----------~~p~~~~~----~~~~  225 (297)
T cd06659         170 DVPK----RKSLVGTPYWMAPEVISRT------PYGTEVDIWSLGIMVIEMVDG----------EPPYFSDS----PVQA  225 (297)
T ss_pred             cccc----ccceecCccccCHHHHccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC----HHHH
Confidence            2211    1234688999999999765      567899999999999999999          66665421    1122


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      +... .  ...+....  .....+..+.+++.+||+.+|++||++.++++.
T Consensus       226 ~~~~-~--~~~~~~~~--~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         226 MKRL-R--DSPPPKLK--NAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHH-h--ccCCCCcc--ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            2211 1  11111111  112345679999999999999999999999884

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=8.2e-38  Score=292.88  Aligned_cols=247  Identities=26%  Similarity=0.435  Sum_probs=190.8

Q ss_pred             ccccceeeeecCeEEEEEEECC------ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        138 ISLSECIGKGRYGEVWRGVWHG------ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~~------~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +++.+.||.|+||.||++.+..      ..||+|.+......  ......|+..+..++|+||+++++++.+.    ...
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~   76 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE----EPL   76 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC----Cee
Confidence            4567899999999999999843      78999988654332  22334455566668999999999998876    357


Q ss_pred             EeeecccCcccHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        210 WLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~---l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++|||+++++|.+++....   +++..+..++.|++.||+|||+.        +++|+||||+||++++++.++|+|||
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~--------~~~h~dl~~~nil~~~~~~~~l~dfg  148 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK--------NFIHRDLAARNCLVGENLVVKISDFG  148 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC--------CeeecccccceEEEccCCeEEEcccC
Confidence            99999999999999996532   99999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++..........   .....++..|+|||.+.+.      .++.++||||||+++|||+++.         ..||...  
T Consensus       149 ~~~~~~~~~~~~---~~~~~~~~~y~~Pe~~~~~------~~~~~~Di~slG~i~~~l~~~g---------~~p~~~~--  208 (258)
T smart00219      149 LSRDLYDDDYYK---KKGGKLPIRWMAPESLKDG------KFTSKSDVWSFGVLLWEIFTLG---------ESPYPGM--  208 (258)
T ss_pred             Cceecccccccc---cccCCCcccccChHHhccC------CCCcchhHHHHHHHHHHHHhCC---------CCCCCCC--
Confidence            997665432111   1122367899999998654      5678999999999999999831         5566542  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                         ....+...+... ..+..+     ...+.++.+++.+||..||++|||+.++++.|
T Consensus       209 ---~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      209 ---SNEEVLEYLKKG-YRLPKP-----ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             ---CHHHHHHHHhcC-CCCCCC-----CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence               222332222221 222222     23667899999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.1e-37  Score=294.41  Aligned_cols=249  Identities=29%  Similarity=0.415  Sum_probs=187.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +++.....||+|+||.||+|.+  ++..||+|.+...... ......|+..+..++|+||+++++++...    ...++|
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv   83 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN----GFFKIF   83 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC----CEEEEE
Confidence            4455567899999999999987  4678999987654332 22334556666669999999999998776    457999


Q ss_pred             ecccCcccHHHHhcc--cCC--CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCC
Q psy14889        213 THYHSFGSLYDHLNR--TTL--NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGL  287 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l--~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGl  287 (443)
                      +||+++++|.+++..  ..+  ++..+..++.||+.||+|||+.        +|+||||||+||+++. ++.+||+|||+
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~i~h~dl~p~nil~~~~~~~~~l~dfg~  155 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN--------QIVHRDIKGDNVLVNTYSGVVKISDFGT  155 (268)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC--------CEeecCCCHHHEEEcCCCCeEEEecchh
Confidence            999999999999965  345  7888999999999999999998        9999999999999976 67999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........    ......|+..|+|||++.....    .++.++||||||+++|||++|          ..||..... 
T Consensus       156 ~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~----~~~~~~Dv~slGvvl~~l~~g----------~~p~~~~~~-  216 (268)
T cd06624         156 SKRLAGINP----CTETFTGTLQYMAPEVIDKGPR----GYGAPADIWSLGCTIVEMATG----------KPPFIELGE-  216 (268)
T ss_pred             heecccCCC----ccccCCCCccccChhhhccccc----cCCchhhhHHHHHHHHHHHhC----------CCCCccccC-
Confidence            875543211    1123457889999999865421    356899999999999999999          566654311 


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ........ ......+.++     ...+.++.+++.+||+.+|++|||+.++++
T Consensus       217 --~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         217 --PQAAMFKV-GMFKIHPEIP-----ESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             --hhhhHhhh-hhhccCCCCC-----cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence              11111111 1111222233     335678999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=5.2e-38  Score=299.15  Aligned_cols=252  Identities=23%  Similarity=0.306  Sum_probs=185.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||+|..  +|+.||+|.+......   ......|+..+..++||||+++++++.+.    ..+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----~~~~l   76 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD----KKLTL   76 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC----CceEE
Confidence            478889999999999999998  6889999988643221   12233466666669999999999998766    45799


Q ss_pred             eecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |+||+. ++|.+++.  ...+++..+..++.||+.||.|||+.        +|+||||||+||+++.++.+||+|||+++
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--------~i~H~dl~~~nil~~~~~~~~l~dfg~~~  147 (284)
T cd07839          77 VFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH--------NVLHRDLKPQNLLINKNGELKLADFGLAR  147 (284)
T ss_pred             EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCCHHHEEEcCCCcEEECccchhh
Confidence            999997 58888775  35689999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+..     .++.++|||||||++|||+||          ..|+.....   
T Consensus       148 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~tg----------~~p~~~~~~---  205 (284)
T cd07839         148 AFGIPVRC----YSAEVVTLWYRPPDVLFGAK-----LYSTSIDMWSAGCIFAELANA----------GRPLFPGND---  205 (284)
T ss_pred             ccCCCCCC----cCCCccccCCcChHHHhCCc-----ccCcHHHHHHHHHHHHHHHhc----------CCCCcCCCC---
Confidence            65432211    12346788999999987642     356799999999999999999          444322110   


Q ss_pred             ChHHHHhhhhh--------------c---CCCCCCCCCC----CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICI--------------D---QQRPVLPNRW----VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~--------------~---~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+........              .   ...+..+...    .....+.++.+++++||+.||.+|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         206 VDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            11111111000              0   0000000000    01124567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=4.2e-38  Score=302.59  Aligned_cols=252  Identities=22%  Similarity=0.284  Sum_probs=187.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|.+.+.||+|+||.||+|..  +++.||+|.+......  ......|+..+..++||||+++++++...    ..+++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~----~~~~l   81 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE----KSLTL   81 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC----CeEEE
Confidence            5799999999999999999987  5789999988643322  22233566666679999999999998766    45799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||++ ++|.+++..  ..+++..+..++.|++.||.|||+.        +|+|+||||+|||+++++.+||+|||++.
T Consensus        82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--------~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  152 (301)
T cd07873          82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR--------KVLHRDLKPQNLLINERGELKLADFGLAR  152 (301)
T ss_pred             EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCCHHHEEECCCCcEEECcCcchh
Confidence            999997 599988864  4688999999999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+..     .++.++|||||||++|||+||+          .||.....   
T Consensus       153 ~~~~~~~~----~~~~~~~~~y~~PE~~~~~~-----~~~~~~Dv~slG~~l~el~tg~----------~~f~~~~~---  210 (301)
T cd07873         153 AKSIPTKT----YSNEVVTLWYRPPDILLGST-----DYSTQIDMWGVGCIFYEMSTGR----------PLFPGSTV---  210 (301)
T ss_pred             ccCCCCCc----ccccceeecccCcHHHhCCC-----CCccHHHHHHHHHHHHHHHhCC----------CCCCCCCH---
Confidence            54322111    12345788999999986542     4567999999999999999994          44443210   


Q ss_pred             ChHHHHhhhh---------------hc-CCCCCCCCC------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVIC---------------ID-QQRPVLPNR------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~---------------~~-~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .+.......               .. ......+..      ......++.+.+|+.+||+.||.+|||+.|+++
T Consensus       211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         211 -EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             -HHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             011100000               00 000001100      001234567899999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-37  Score=291.59  Aligned_cols=244  Identities=25%  Similarity=0.395  Sum_probs=188.5

Q ss_pred             ceeeeecCeEEEEEEEC-CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCc
Q psy14889        142 ECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSF  218 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~  218 (443)
                      ++||+|+||.||++... ++.||+|.+......  ......|+..+..++|+||+++++++....    ..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ----PIYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC----CeEEEEEcCCC
Confidence            46899999999999984 899999987654332  223345566666699999999999987663    47999999999


Q ss_pred             ccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        219 GSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       219 gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      ++|.+++.+  ..+++..++.++.+++.||.|||++        +++||||||+|||++.++.+||+|||++........
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~--------~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  148 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK--------NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY  148 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEehhhcCcceEEEcCCCcEEEeeccccccccCCcc
Confidence            999999854  4588999999999999999999998        999999999999999999999999999876542211


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHH
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMR  375 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~  375 (443)
                      ..  ......++..|+|||.+.++      .++.++||||||+++|||+| |          ..||....     .....
T Consensus       149 ~~--~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~i~~~l~t~~----------~~p~~~~~-----~~~~~  205 (251)
T cd05041         149 TV--SDGLKQIPIKWTAPEALNYG------RYTSESDVWSYGILLWETFSLG----------DTPYPGMS-----NQQTR  205 (251)
T ss_pred             ee--ccccCcceeccCChHhhccC------CCCcchhHHHHHHHHHHHHhcc----------CCCCccCC-----HHHHH
Confidence            11  11122345679999998766      56789999999999999999 5          56775542     12222


Q ss_pred             hhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ..+.. ......+     ...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus       206 ~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         206 ERIES-GYRMPAP-----QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHhc-CCCCCCC-----ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            22221 1122222     345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.2e-37  Score=293.05  Aligned_cols=254  Identities=27%  Similarity=0.443  Sum_probs=195.2

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|+..+.||+|+||.||+|..  +++.||+|.+......   ......|+..+..++|+||+++++.+...    ..+++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l   76 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR----EKVYI   76 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC----CEEEE
Confidence            478889999999999999987  5789999998655432   22234566666679999999999987665    45799


Q ss_pred             eecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |+||+++++|.+++... .+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.+||+|||++..
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--------~i~H~dl~~~nil~~~~~~~kl~d~g~~~~  148 (264)
T cd06626          77 FMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH--------GIVHRDIKPANIFLDHNGVIKLGDFGCAVK  148 (264)
T ss_pred             EEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEcccccccc
Confidence            99999999999999764 588999999999999999999998        999999999999999999999999999877


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ................++..|+|||++.+...   ...+.++||||||+++||+++|          ..||....   ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~---~~~~~~~Dv~s~G~il~~l~~g----------~~pf~~~~---~~  212 (264)
T cd06626         149 LKNNTTTMGEEVQSLAGTPAYMAPEVITGGKG---KGHGRAADIWSLGCVVLEMATG----------KRPWSELD---NE  212 (264)
T ss_pred             cCCCCCcccccccCCcCCcCccChhhccCCCC---CCCCcccchHHHHHHHHHHHhC----------CCCccCCc---ch
Confidence            65433222111123467889999999876521   1366899999999999999999          66775431   11


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .. ....+.. ...+.+|..   ...+..+.+++.+||+.||++|||+.+++.
T Consensus       213 ~~-~~~~~~~-~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         213 FQ-IMFHVGA-GHKPPIPDS---LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HH-HHHHHhc-CCCCCCCcc---cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            11 1111111 233334421   224667899999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=5.3e-38  Score=303.98  Aligned_cols=193  Identities=26%  Similarity=0.387  Sum_probs=150.7

Q ss_pred             cceeeeecCeEEEEEEEC----CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        141 SECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      ..+||+|+||.||+|...    +..||+|.+..... ......|+..+..++||||+++++++.....  ..+++|+||+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~lv~e~~   82 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSD--RKVWLLFDYA   82 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCC--CeEEEEEeee
Confidence            357999999999999862    46899998764432 2223345555666999999999999865433  4579999998


Q ss_pred             CcccHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----cCCCcEEE
Q psy14889        217 SFGSLYDHLNR----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVI  282 (443)
Q Consensus       217 ~~gsL~~~l~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----~~~~~~kl  282 (443)
                      .+ +|.+++..          ..+++..+..++.||+.||.|||+.        +|+||||||+|||+    +.++.+||
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~~~~kl  153 (317)
T cd07867          83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN--------WVLHRDLKPANILVMGEGPERGRVKI  153 (317)
T ss_pred             CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC--------CEEcCCCCHHHEEEccCCCCCCcEEE
Confidence            75 88777631          2488899999999999999999998        99999999999999    56679999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +|||+++......... .......||+.|+|||++.+..     .++.++|||||||++|||+||++++
T Consensus       154 ~DfG~a~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~el~tg~~~f  216 (317)
T cd07867         154 ADMGFARLFNSPLKPL-ADLDPVVVTFWYRAPELLLGAR-----HYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             eeccceeccCCCcccc-cccCcceecccccCcHHhcCCC-----ccCcHHHHHhHHHHHHHHHhCCCCc
Confidence            9999998765432211 1123457899999999987642     4568999999999999999996554

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.8e-38  Score=300.31  Aligned_cols=251  Identities=23%  Similarity=0.344  Sum_probs=192.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||+||++..  +|+.||+|++......  ......|+..+..++||||+++++++...    ..+++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~l   80 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE----NNICM   80 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC----CEEEE
Confidence            5788999999999999999998  4889999987644322  12223455556668999999999998876    45899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||+++|+|.+++.+ +.+++..+..++.+++.||.|||+..       +++||||||+||++++++.++|+|||++..
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-------~i~H~dl~p~nil~~~~~~~~l~d~gl~~~  153 (284)
T cd06620          81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH-------RIMHRDIKPSNILVNSRGQIKLCDFGVSGE  153 (284)
T ss_pred             EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc-------CeeccCCCHHHEEECCCCcEEEccCCcccc
Confidence            9999999999998865 56899999999999999999999742       899999999999999999999999999865


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC--
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD--  368 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~--  368 (443)
                      .....      .....|+..|+|||++.+.      .++.++|||||||++||++||          ..||.......  
T Consensus       154 ~~~~~------~~~~~~~~~~~aPE~~~~~------~~~~~~Di~slG~~l~~l~tg----------~~p~~~~~~~~~~  211 (284)
T cd06620         154 LINSI------ADTFVGTSTYMSPERIQGG------KYTVKSDVWSLGISIIELALG----------KFPFAFSNIDDDG  211 (284)
T ss_pred             hhhhc------cCccccCcccCCHHHHccC------CCCccchHHHHHHHHHHHHhC----------CCCCcccchhhhh
Confidence            43211      1234689999999998765      566899999999999999999          55655432110  


Q ss_pred             -CC----hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        369 -PS----FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       369 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       ..    .+......  ....+.++    ...++..+.+|+.+||+.||++|||+.|+++..
T Consensus       212 ~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         212 QDDPMGILDLLQQIV--QEPPPRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             hhhhhHHHHHHHHHh--hccCCCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence             00    01111111  11122222    123567899999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=5.7e-38  Score=300.07  Aligned_cols=253  Identities=23%  Similarity=0.304  Sum_probs=184.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|.+.+.||+|+||.||+|..  +|..||+|++......  ......|+..+..++|+||+++++++...    ...++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----~~~~l   80 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK----ETLTF   80 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC----CeEEE
Confidence            6899999999999999999987  5889999988654322  22334556666669999999999998765    35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |+||+. ++|.+++..  ..+++..+..++.|++.||.|||+.        +|+|+||||+|||++.++.+||+|||+++
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~--------~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~  151 (291)
T cd07870          81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ--------HILHRDLKPQNLLISYLGELKLADFGLAR  151 (291)
T ss_pred             EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCChHHEEEcCCCcEEEecccccc
Confidence            999996 678777643  4578899999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.....   
T Consensus       152 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~~l~~l~~g----------~~~f~~~~~---  209 (291)
T cd07870         152 AKSIPSQT----YSSEVVTLWYRPPDVLLGAT-----DYSSALDIWGAGCIFIEMLQG----------QPAFPGVSD---  209 (291)
T ss_pred             ccCCCCCC----CCCccccccccCCceeecCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCchh---
Confidence            54322111    12345788999999987541     355789999999999999999          445543211   


Q ss_pred             ChHHHHhhhhh------------------------cCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICI------------------------DQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+......                        ..........+.....+..+.+++.+|+..||++|||+.|++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         210 VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            00111111000                        0000000000111112457899999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=9.8e-38  Score=296.97  Aligned_cols=249  Identities=23%  Similarity=0.424  Sum_probs=188.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +|+.||+|++......    ....|.++ .++.++||||+++++++...    ...
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~iv~~~~~~~~~----~~~   75 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDI-SMRSVDCPYTVTFYGALFRE----GDV   75 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHH-HHHHcCCCCeeeeeEEEecC----CcE
Confidence            3688899999999999999998  5899999988654321    12223232 23347999999999998765    347


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      +++|||++ |+|.+++..     ..+++..+..++.||+.||+|||++.       +++||||||+||+++.++.+||+|
T Consensus        76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-------~i~h~dlkp~nil~~~~~~~kl~d  147 (283)
T cd06617          76 WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL-------SVIHRDVKPSNVLINRNGQVKLCD  147 (283)
T ss_pred             EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CeecCCCCHHHEEECCCCCEEEee
Confidence            99999997 688887743     36899999999999999999999752       899999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++..+.....     .+...|+..|+|||.+.+.....  .++.++|+||||+++|||++|          ..||...
T Consensus       148 fg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~--~~~~~~Di~slG~~l~~l~~g----------~~p~~~~  210 (283)
T cd06617         148 FGISGYLVDSVA-----KTIDAGCKPYMAPERINPELNQK--GYDVKSDVWSLGITMIELATG----------RFPYDSW  210 (283)
T ss_pred             cccccccccccc-----cccccCCccccChhhcCCccccc--ccCccccchhhHHHHHHHHhC----------CCCCCcc
Confidence            999876543211     12346888999999987542211  566899999999999999999          6676542


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .   ...+.+....  ....+.++.    ...+.++.+++.+||..+|++|||+.++++
T Consensus       211 ~---~~~~~~~~~~--~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         211 K---TPFQQLKQVV--EEPSPQLPA----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             c---cCHHHHHHHH--hcCCCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1   1223333322  122233332    235678999999999999999999999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=4.5e-38  Score=301.79  Aligned_cols=252  Identities=23%  Similarity=0.315  Sum_probs=188.0

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|++.+.||+|+||.||+|..  +|+.||||.+......      ......|+..+..++|+||+++++++.+.    ..
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~   76 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK----SN   76 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----CE
Confidence            477889999999999999997  5789999988654322      12223456666669999999999998774    45


Q ss_pred             EEeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+ +|+|.+++...  .+++..+..++.||++||.|||+.        +|+|+||||+||+++.++.+||+|||
T Consensus        77 ~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~i~H~dl~p~nill~~~~~~~l~dfg  147 (298)
T cd07841          77 INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN--------WILHRDLKPNNLLIASDGVLKLADFG  147 (298)
T ss_pred             EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecCCChhhEEEcCCCCEEEccce
Confidence            89999999 89999999764  599999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........    .....++..|+|||.+.+..     .++.++|||||||++|||++|.          .||.... 
T Consensus       148 ~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~il~e~~~g~----------~~~~~~~-  207 (298)
T cd07841         148 LARSFGSPNRK----MTHQVVTRWYRAPELLFGAR-----HYGVGVDMWSVGCIFAELLLRV----------PFLPGDS-  207 (298)
T ss_pred             eeeeccCCCcc----ccccccceeeeCHHHHhCCC-----CCCcHHHHHHHHHHHHHHHcCC----------ccccCCc-
Confidence            99766543211    12335678899999885431     4567999999999999999993          3333211 


Q ss_pred             CCCChHHHHhhhhh--------------------cCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICI--------------------DQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                         ..+...+....                    ....+..+........+..+.+++.+||+.||++|||+.|+++.
T Consensus       208 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         208 ---DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ---cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence               11111111100                    00000011000112345779999999999999999999999883

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1e-37  Score=293.83  Aligned_cols=255  Identities=27%  Similarity=0.389  Sum_probs=194.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||.|+||.||+|..  ++..+|+|++......  ......|+..+..++|+||+++++.+...    ...++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~i   76 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG----DELWL   76 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC----CEEEE
Confidence            4688999999999999999987  5789999988643322  12234555556669999999999988765    45799


Q ss_pred             eecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      |+||+++++|.+++..    ..+++..+..++.|++.||+|||+.        +++|+||+|+||++++++.+||+|||+
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~--------~i~h~~l~p~ni~~~~~~~~~l~df~~  148 (267)
T cd06610          77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN--------GQIHRDIKAGNILLGEDGSVKIADFGV  148 (267)
T ss_pred             EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHhEEEcCCCCEEEcccch
Confidence            9999999999999864    3589999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +..+...............|+..|+|||.+....     ..+.++|+||||+++|||++|          ..||..... 
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~-----~~~~~~Dv~slG~i~~~l~~g----------~~p~~~~~~-  212 (267)
T cd06610         149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH-----GYDFKADIWSFGITAIELATG----------AAPYSKYPP-  212 (267)
T ss_pred             HHHhccCccccccccccccCChhhcChHHHcccc-----CcCcccchHhHhHHHHHHHhC----------CCCccccCh-
Confidence            8766543322111223446889999999987641     456799999999999999999          667655322 


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         .....+....  ..+..+........+..+.+++.+||+.||++|||+.++++
T Consensus       213 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         213 ---MKVLMLTLQN--DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             ---hhhHHHHhcC--CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence               1122222211  11222211111245678999999999999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.1e-37  Score=292.21  Aligned_cols=244  Identities=25%  Similarity=0.398  Sum_probs=191.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++..  +|+.||+|.+....   ......+.|+..++.++||||+++++++...    ...++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~l   76 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN----GNLYI   76 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC----CeEEE
Confidence            478899999999999999987  68899999886432   1222335566677779999999999998765    46899


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||+++++|.+++..   ..+++.+++.++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|||++
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~~l~~~nil~~~~~~~~l~d~~~~  148 (256)
T cd08218          77 VMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR--------KILHRDIKSQNIFLTKDGTIKLGDFGIA  148 (256)
T ss_pred             EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence            9999999999999864   3578999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....|+..|+|||++.+.      ..+.++|+|||||++|||++|          ..||...    
T Consensus       149 ~~~~~~~~~----~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~slG~i~~~l~~g----------~~~~~~~----  204 (256)
T cd08218         149 RVLNSTVEL----ARTCIGTPYYLSPEICENR------PYNNKSDIWALGCVLYEMCTL----------KHAFEAG----  204 (256)
T ss_pred             eecCcchhh----hhhccCCccccCHHHhCCC------CCCCccchhHHHHHHHHHHcC----------CCCccCC----
Confidence            765432211    1233578899999998776      566799999999999999999          5565432    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ........+. ....+..+     ...+..+.+++.+||+.+|++||++.+|++
T Consensus       205 -~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         205 -NMKNLVLKII-RGSYPPVS-----SHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             -CHHHHHHHHh-cCCCCCCc-----ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence             1122222211 12222222     235677999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.4e-37  Score=294.25  Aligned_cols=253  Identities=26%  Similarity=0.395  Sum_probs=191.4

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cc-----hHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------AS-----WSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~-----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      +|...+.||+|+||.||+|..  +|+.||+|.+.....      ..     .....|+..+..++||||+++++++... 
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE-   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence            467788999999999999986  688999998753211      00     1123466666679999999999998765 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                         ...++||||+++|+|.+++.+ ..+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.++|
T Consensus        81 ---~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~~~nil~~~~~~~~l  149 (272)
T cd06629          81 ---EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK--------GILHRDLKADNLLVDADGICKI  149 (272)
T ss_pred             ---CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC--------CeeecCCChhhEEEcCCCeEEE
Confidence               357999999999999999865 5789999999999999999999998        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+++.........  ......|+..|+|||.+.....    .++.++|+||||+++||+++|          ..||.
T Consensus       150 ~d~~~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~----~~~~~~Dv~slG~~l~~l~~g----------~~p~~  213 (272)
T cd06629         150 SDFGISKKSDDIYDND--QNMSMQGSVFWMAPEVIHSYSQ----GYSAKVDIWSLGCVVLEMFAG----------RRPWS  213 (272)
T ss_pred             eecccccccccccccc--ccccccCCccccCHHHhccccC----CCCccchhHHHHHHHHHHHhC----------CCCCc
Confidence            9999987544321111  1233468889999999876521    356899999999999999999          66664


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...    ......... .....+.++... ...++..+.+++.+||+.||++|||+.++++
T Consensus       214 ~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         214 DEE----AIAAMFKLG-NKRSAPPIPPDV-SMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             Ccc----hHHHHHHhh-ccccCCcCCccc-cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            321    111222211 112223333221 1235678999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9e-38  Score=296.39  Aligned_cols=246  Identities=30%  Similarity=0.481  Sum_probs=190.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhcc---CCCceeeeeeccccCCcccEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~---H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .|+..+.||+|+||.||+|.+  +++.||+|.+......  ....+.|+..+..++   |||++++++++...    ...
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~----~~~   77 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG----PRL   77 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----CEE
Confidence            477889999999999999997  5889999987643221  222334555555565   99999999998765    457


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++||||+++++|.++++...+++..++.++.|++.||.|||+.        +|+|+||+|+||+++.++.++|+|||++.
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--------~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06917          78 WIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV--------GVIHRDIKAANILVTNTGNVKLCDFGVAA  149 (277)
T ss_pred             EEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCcCHHHEEEcCCCCEEEccCCcee
Confidence            9999999999999999888899999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....|+..|+|||.+.++.     .++.++|+||||+++|||++|          ..||.....   
T Consensus       150 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~~l~~ll~g----------~~p~~~~~~---  207 (277)
T cd06917         150 LLNQNSSK----RSTFVGTPYWMAPEVITEGK-----YYDTKADIWSLGITIYEMATG----------NPPYSDVDA---  207 (277)
T ss_pred             ecCCCccc----cccccCCcceeCHHHhccCC-----ccccchhHHHHHHHHHHHHhC----------CCCCCCCCh---
Confidence            66543321    12346889999999986542     456799999999999999999          566654311   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .... ... .....+.++    ....+.++.+++.+||+.||++||++.++++
T Consensus       208 -~~~~-~~~-~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         208 -FRAM-MLI-PKSKPPRLE----DNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             -hhhh-hcc-ccCCCCCCC----cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence             1111 111 011112222    1235678999999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.2e-37  Score=293.89  Aligned_cols=252  Identities=21%  Similarity=0.339  Sum_probs=192.4

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +|+..+.||+|+||.||++..  +++.||+|.+.....       .......|+..+..++|+||+++++++.+.    .
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~   76 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----S   76 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC----C
Confidence            477789999999999999986  688999998864321       112234566677779999999999998766    3


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~Df  285 (443)
                      .+++|+||+++++|.+++.+ ..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++ .+||+||
T Consensus        77 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~--------~i~H~~i~~~nil~~~~~~~~~l~df  148 (268)
T cd06630          77 HFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN--------QIIHRDVKGANLLIDSTGQRLRIADF  148 (268)
T ss_pred             eEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEEccc
Confidence            57999999999999999965 5689999999999999999999998        999999999999998776 6999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++..................|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||....
T Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~~l~~l~~g----------~~p~~~~~  212 (268)
T cd06630         149 GAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE------QYGRSCDVWSVGCVIIEMATA----------KPPWNAEK  212 (268)
T ss_pred             ccccccccccccCCccccccccccceeCHhHhccC------CCCcccchHHHHHHHHHHHhC----------CCCCCCCC
Confidence            99977654322222222344688999999998765      566899999999999999999          55664321


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ... ......... .....+..+     ...+.++.+++.+||..||++|||+.++++
T Consensus       213 ~~~-~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         213 HSN-HLALIFKIA-SATTAPSIP-----EHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             Ccc-hHHHHHHHh-ccCCCCCCc-----hhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            111 111111111 111122222     335678999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5.8e-38  Score=298.88  Aligned_cols=253  Identities=23%  Similarity=0.307  Sum_probs=188.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||+|++......   ......|+..+..++||||+++++++...    ..++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~   76 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK----RKLH   76 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC----CEEE
Confidence            3688899999999999999998  5889999987543221   12234566666669999999999998766    4579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++++|..++.. ..+++.+++.++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++.
T Consensus        77 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~--------~i~H~dl~p~nil~~~~~~~~l~dfg~~~  148 (286)
T cd07847          77 LVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH--------NCIHRDVKPENILITKQGQIKLCDFGFAR  148 (286)
T ss_pred             EEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCChhhEEEcCCCcEEECccccce
Confidence            99999999888887754 5699999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.+....  
T Consensus       149 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~slG~i~~~l~~g----------~~p~~~~~~~--  207 (286)
T cd07847         149 ILTGPGDD----YTDYVATRWYRAPELLVGDT-----QYGPPVDVWAIGCVFAELLTG----------QPLWPGKSDV--  207 (286)
T ss_pred             ecCCCccc----ccCcccccccCCHHHHhCCC-----CcCchhhhHHHHHHHHHHHhC----------CCCCCCCChH--
Confidence            66543211    12335778999999986531     456799999999999999999          5666543211  


Q ss_pred             ChHHHHhhhhh--------------cCC--CCCCCCCC-------CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICI--------------DQQ--RPVLPNRW-------VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~--------------~~~--~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        +........              ...  ....+...       .....+..+.+++.+||+.||++|||+.|+++
T Consensus       208 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         208 --DQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             --HHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence              111110000              000  00000000       00124567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.4e-37  Score=299.62  Aligned_cols=254  Identities=20%  Similarity=0.219  Sum_probs=190.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  .++.||+|.+......    ......|+..+..++||||+++++.+...    ..+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~   76 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK----RHL   76 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC----CEE
Confidence            3688899999999999999988  5789999987654211    11223455555669999999999988765    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~NIll~~~~~~~l~dfg~~  148 (305)
T cd05609          77 CMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY--------GIVHRDLKPDNLLITSMGHIKLTDFGLS  148 (305)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCchHHEEECCCCCEEEeeCCCc
Confidence            999999999999999964 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCc-----------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        289 VSYSQLSNK-----------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       289 ~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      +........           .........|+..|+|||.+...      .++.++|+||||+++|||++|          
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~vl~el~~g----------  212 (305)
T cd05609         149 KIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ------GYGKPVDWWAMGIILYEFLVG----------  212 (305)
T ss_pred             cccCcCccccccccccccchhhccccCCccCccccCchhccCC------CCCchhhHHHHHHHHHHHHhC----------
Confidence            642111000           00011224578899999998765      567899999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcC-CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      ..||.+.     ....+........ ..+..     ....+.++.+++.+||+.||++||++.++.+.|+.
T Consensus       213 ~~pf~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         213 CVPFFGD-----TPEELFGQVISDDIEWPEG-----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             CCCCCCC-----CHHHHHHHHHhcccCCCCc-----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            6677543     1222222221111 11111     12356789999999999999999997666655554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0579|consensus

Probab=100.00  E-value=1.5e-39  Score=316.17  Aligned_cols=252  Identities=25%  Similarity=0.428  Sum_probs=194.0

Q ss_pred             ccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccch-HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~-~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.+.++..||.|+||.||+|...  +-..|.|++........ ....||.++...+||+||++++.|+..    +.+|+.
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e----nkLwil  107 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE----NKLWIL  107 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc----CceEEE
Confidence            45677888999999999999874  44557787754433222 223455555558999999999988876    458999


Q ss_pred             ecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      .|||.||-.+..+-  ...|++.++..++.|++.||.|||++        +|||||||+.|||++-+|.++|+|||.+..
T Consensus       108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~--------~iIHRDLKAGNiL~TldGdirLADFGVSAK  179 (1187)
T KOG0579|consen  108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ--------NIIHRDLKAGNILLTLDGDIRLADFGVSAK  179 (1187)
T ss_pred             EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc--------chhhhhccccceEEEecCcEeeeccccccc
Confidence            99999999988774  47899999999999999999999999        999999999999999999999999999754


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    ...+.||+.|||||+.......+ .+|..++||||||++|.||..+          ..|.++..++   
T Consensus       180 n~~t~qk----RDsFIGTPYWMAPEVvmCET~KD-~PYDykaDiWSlGITLIEMAqi----------EPPHhelnpM---  241 (1187)
T KOG0579|consen  180 NKSTRQK----RDSFIGTPYWMAPEVVMCETFKD-QPYDYKADIWSLGITLIEMAQI----------EPPHHELNPM---  241 (1187)
T ss_pred             chhHHhh----hccccCCcccccchheeeccccC-CCchhhhhHHhhhhHHHHHhcc----------CCCccccchH---
Confidence            3322222    24578999999999987654333 2777899999999999999998          7776665332   


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ..+.++...+.....-|..|     +..+.+++.+||..||..||++.++++
T Consensus       242 -RVllKiaKSePPTLlqPS~W-----s~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  242 -RVLLKIAKSEPPTLLQPSHW-----SRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             -HHHHHHhhcCCCcccCcchh-----hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence             22233332222222234334     456999999999999999999999886

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.3e-37  Score=291.66  Aligned_cols=245  Identities=28%  Similarity=0.428  Sum_probs=191.1

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|+..+.||+|+||.||+|..  +++.|++|.+.....      .......|+..+..++|+||+++++++...    ..
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~   76 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE----DN   76 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----Ce
Confidence            467788999999999999987  588999998765332      112334566666779999999999988765    45


Q ss_pred             EEeeecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++++||+++++|.+++.+. .+++..+..++.|++.||+|||+.        +++|+||+|+||+++.++.+||+|||+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~~~ni~~~~~~~~kl~d~~~  148 (258)
T cd06632          77 LYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR--------NTVHRDIKGANILVDTNGVVKLADFGM  148 (258)
T ss_pred             EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEccCcc
Confidence            79999999999999999754 489999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.......     ......|+..|+|||.+....     .++.++|+||||+++|||++|          ..||....  
T Consensus       149 ~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~-----~~~~~~D~~slG~~l~~l~~g----------~~pf~~~~--  206 (258)
T cd06632         149 AKQVVEFS-----FAKSFKGSPYWMAPEVIAQQG-----GYGLAADIWSLGCTVLEMATG----------KPPWSQLE--  206 (258)
T ss_pred             ceeccccc-----cccccCCCcceeCHHHhcCCC-----CCCchhhhHHHHHHHHHHHhC----------CCCcccCc--
Confidence            87654322     113346888999999986541     256899999999999999999          66665432  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ......... .....+.++     ...+..+.+++.+||+.+|++||++.+++.
T Consensus       207 --~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         207 --GVAAVFKIG-RSKELPPIP-----DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             --HHHHHHHHH-hcccCCCcC-----CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence              111111111 111222222     235677999999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.8e-37  Score=294.62  Aligned_cols=246  Identities=30%  Similarity=0.460  Sum_probs=193.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +-|++.+.||+|+||.||+|..  ++..||+|.........  .....|+..+..++||||+++++++...    ...++
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~l   79 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD----TKLWI   79 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC----CeEEE
Confidence            4577889999999999999987  57899999875432211  1223455566669999999999998766    45799


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++|+|.+++....+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.++|+|||++..+
T Consensus        80 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06641          80 IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE--------KKIHRDIKAANVLLSEHGEVKLADFGVAGQL  151 (277)
T ss_pred             EEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC--------CeecCCCCHHhEEECCCCCEEEeecccceec
Confidence            99999999999999888899999999999999999999988        9999999999999999999999999998765


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....    ......|+..|+|||.+.+.      ..+.++|+|||||++|||++|          ..||.....     
T Consensus       152 ~~~~~----~~~~~~~~~~y~~PE~~~~~------~~~~~~Dv~slG~~l~~l~~g----------~~p~~~~~~-----  206 (277)
T cd06641         152 TDTQI----KRNTFVGTPFWMAPEVIKQS------AYDSKADIWSLGITAIELAKG----------EPPHSELHP-----  206 (277)
T ss_pred             ccchh----hhccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHcC----------CCCCCccch-----
Confidence            43211    11234678899999998765      556799999999999999999          666654311     


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ......+ .....+.++     ...+.++.+++.+||+.+|.+||++.++++.
T Consensus       207 ~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         207 MKVLFLI-PKNNPPTLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHH-hcCCCCCCC-----cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1111111 112222222     3356779999999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-37  Score=301.16  Aligned_cols=250  Identities=23%  Similarity=0.337  Sum_probs=192.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|.+.......    .....|+..+..++|+||+++++.+...    ...
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~   76 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE----TYL   76 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC----CEE
Confidence            3688899999999999999988  47999999886543221    1223455666669999999999998765    458


Q ss_pred             EeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        210 WLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ++||||+.+++|.+++.+   ..+++..+..++.|++.||+|||+.        +++|+||||+||+++.++.++|+|||
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~~l~dfg  148 (316)
T cd05574          77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL--------GIVYRDLKPENILLHESGHIMLSDFD  148 (316)
T ss_pred             EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCChHHeEEcCCCCEEEeecc
Confidence            999999999999999864   4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcC-------------------------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHH
Q psy14889        287 LAVSYSQLSNKM-------------------------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL  341 (443)
Q Consensus       287 la~~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl  341 (443)
                      ++..........                         ........||..|+|||++.+.      .++.++||||||+++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Di~slG~ll  222 (316)
T cd05574         149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD------GHGSAVDWWTLGILL  222 (316)
T ss_pred             hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC------CCCchHHHHHHHHHH
Confidence            986543321110                         0111234688999999999765      567899999999999


Q ss_pred             HHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc----
Q psy14889        342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS----  417 (443)
Q Consensus       342 ~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----  417 (443)
                      |||++|          ..||.....    ........   ......+..   ...+..+.+++.+||+.||++|||    
T Consensus       223 ~~l~~g----------~~pf~~~~~----~~~~~~~~---~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~  282 (316)
T cd05574         223 YEMLYG----------TTPFKGSNR----DETFSNIL---KKEVTFPGS---PPVSSSARDLIRKLLVKDPSKRLGSKRG  282 (316)
T ss_pred             HHHhhC----------CCCCCCCch----HHHHHHHh---cCCccCCCc---cccCHHHHHHHHHHccCCHhHCCCchhh
Confidence            999999          677754321    12222222   122222221   125678999999999999999999    


Q ss_pred             HHHHHH
Q psy14889        418 ALRVKK  423 (443)
Q Consensus       418 ~~evl~  423 (443)
                      +.++++
T Consensus       283 ~~~ll~  288 (316)
T cd05574         283 AAEIKQ  288 (316)
T ss_pred             HHHHHc
Confidence            777666

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0983|consensus

Probab=100.00  E-value=2.1e-38  Score=280.99  Aligned_cols=250  Identities=22%  Similarity=0.375  Sum_probs=196.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH--HHHHHHHHh-ccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR--ETEIYSTVL-LRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~--e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++++....||.|+-|.|+++++  +|...|||.+..........  ..++....+ -..|.||+.+|+|.....    ++
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d----V~  167 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD----VF  167 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch----HH
Confidence            4567788899999999999998  57999999987654432221  122222221 236999999999998744    68


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +.||.|.. .++.++++  +++++..+-++...+++||.||-+++       +|+|||+||+|||+|+.|.+||+|||++
T Consensus       168 IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH-------~viHRDvKPSNILlDe~GniKlCDFGIs  239 (391)
T KOG0983|consen  168 ICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH-------GVIHRDVKPSNILLDERGNIKLCDFGIS  239 (391)
T ss_pred             HHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc-------ceeecccCccceEEccCCCEEeeccccc
Confidence            99999864 66666653  67889888999999999999999875       9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+.+....     +...|.+.|||||.+.-....   .|..++||||||++++||+||          ++||..-   +
T Consensus       240 GrlvdSkAh-----trsAGC~~YMaPERidp~~~~---kYDiRaDVWSlGITlveLaTg----------~yPy~~c---~  298 (391)
T KOG0983|consen  240 GRLVDSKAH-----TRSAGCAAYMAPERIDPPDKP---KYDIRADVWSLGITLVELATG----------QYPYKGC---K  298 (391)
T ss_pred             ceeeccccc-----ccccCCccccCccccCCCCCC---ccchhhhhhhhccchhhhhcc----------cCCCCCC---C
Confidence            776543322     344788999999998754322   677899999999999999999          8898874   3


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..++.+.++..  ...|.++..   ...+..+.+++..||..|+.+||...++++
T Consensus       299 tdFe~ltkvln--~ePP~L~~~---~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  299 TDFEVLTKVLN--EEPPLLPGH---MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             ccHHHHHHHHh--cCCCCCCcc---cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            45666666654  334556542   236778999999999999999999999876

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.5e-37  Score=289.60  Aligned_cols=243  Identities=24%  Similarity=0.351  Sum_probs=188.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++..  +++.+|+|.+.....   .......|+..+..++||||+++++.+...    ...++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~l   76 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED----KALMI   76 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC----CEEEE
Confidence            478899999999999999987  678999998865321   122234566666669999999999987655    45799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfGl  287 (443)
                      ||||+++++|.+++..   ..+++..+..++.|++.||.|||++        +++|+||||+||+++.+ +.+||+|||+
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~~~nil~~~~~~~~~l~d~~~  148 (256)
T cd08220          77 VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK--------LILHRDLKTQNILLDKHKMVVKIGDFGI  148 (256)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence            9999999999999964   3489999999999999999999998        99999999999999865 4689999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........     .....|+..|+|||.+.+.      .++.++||||||+++|+|++|          ..||....  
T Consensus       149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~~l~~~----------~~~~~~~~--  205 (256)
T cd08220         149 SKILSSKSK-----AYTVVGTPCYISPELCEGK------PYNQKSDIWALGCVLYELASL----------KRAFEAAN--  205 (256)
T ss_pred             ceecCCCcc-----ccccccCCcccCchhccCC------CCCcccchHHHHHHHHHHHhC----------CCCcccCc--
Confidence            976653321     1234688899999998765      566899999999999999999          56665421  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ......... . .....++     ...+..+.+++.+||+.||++|||+.|+++
T Consensus       206 --~~~~~~~~~-~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         206 --LPALVLKIM-S-GTFAPIS-----DRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             --hHHHHHHHH-h-cCCCCCC-----CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence              111111221 1 1122222     235667999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.6e-37  Score=293.36  Aligned_cols=248  Identities=25%  Similarity=0.401  Sum_probs=188.6

Q ss_pred             cccccceeeeecCeEEEEEEEC---CceeEEEEeeccCcc--------c---hHHHHHHHHHH-hccCCCceeeeeeccc
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEA--------S---WSRETEIYSTV-LLRHENILGYIGSDMT  201 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~~--------~---~~~e~ei~~~~-~l~H~nIv~l~g~~~~  201 (443)
                      +|++.+.||+|+||.||+|.+.   ++.+|+|.+......        .   .....|+..+. .++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4778899999999999999983   578999987532111        1   11123443333 3789999999999877


Q ss_pred             cCCcccEEEeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                      .    ...+++|||+++++|.+++.     ...+++..++.++.|++.||.|||+..       +++|+||+|+||+++.
T Consensus        81 ~----~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-------~i~H~dl~~~nil~~~  149 (269)
T cd08528          81 N----DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK-------RIVHRDLTPNNIMLGE  149 (269)
T ss_pred             C----CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC-------ceeecCCCHHHEEECC
Confidence            6    45799999999999998873     346899999999999999999999631       8999999999999999


Q ss_pred             CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                      ++.+||+|||++.......     ......|+..|+|||.+.+.      .++.++||||||+++|||++|         
T Consensus       150 ~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~ll~~l~~g---------  209 (269)
T cd08528         150 DDKVTITDFGLAKQKQPES-----KLTSVVGTILYSCPEIVKNE------PYGEKADVWAFGCILYQMCTL---------  209 (269)
T ss_pred             CCcEEEecccceeeccccc-----ccccccCcccCcChhhhcCC------CCchHHHHHHHHHHHHHHHhC---------
Confidence            9999999999997654322     12334688999999999865      567899999999999999999         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                       ..||...     ........+..... ...+.    ...+..+.+++.+||+.||++||++.|+..++.
T Consensus       210 -~~p~~~~-----~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         210 -QPPFYST-----NMLSLATKIVEAVY-EPLPE----GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             -CCccccc-----CHHHHHHHHhhccC-CcCCc----ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence             6666542     11222222221111 11111    234567999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.5e-37  Score=295.67  Aligned_cols=241  Identities=23%  Similarity=0.326  Sum_probs=191.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++.+  +++.||+|++.....    .......|+..+..++||||+++++++...    ..+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   76 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD----SNL   76 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC----CeE
Confidence            3688999999999999999988  578999998864321    112223456666669999999999998766    457


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +++|+||+|+|||++.++.+||+|||++
T Consensus        77 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~--------~i~H~dl~p~nili~~~~~~kl~dfg~~  148 (290)
T cd05580          77 YLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL--------DIVYRDLKPENLLLDSDGYIKITDFGFA  148 (290)
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            999999999999999864 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ......       .....|++.|+|||.+.+.      ..+.++||||||+++|||++|          ..||....   
T Consensus       149 ~~~~~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~---  202 (290)
T cd05580         149 KRVKGR-------TYTLCGTPEYLAPEIILSK------GYGKAVDWWALGILIYEMLAG----------YPPFFDDN---  202 (290)
T ss_pred             cccCCC-------CCCCCCCccccChhhhcCC------CCCccccHHHHHHHHHHHHhC----------CCCCCCCC---
Confidence            766432       1234688999999998765      556789999999999999999          66775432   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                        .....+.+.  .....++.     ..+..+.+++.+||..||.+|+     ++.|+++
T Consensus       203 --~~~~~~~~~--~~~~~~~~-----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         203 --PIQIYEKIL--EGKVRFPS-----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             --HHHHHHHHh--cCCccCCc-----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence              122222221  22233332     2456799999999999999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.2e-37  Score=298.35  Aligned_cols=248  Identities=27%  Similarity=0.452  Sum_probs=193.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|.+.+.||+|+||.||++..  +++.||+|.+...... ......|+..+..++||||+++++.+...    ...++|
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~lv   94 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----DELWVV   94 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC----CcEEEE
Confidence            6899999999999999999986  6789999987543222 12223455556668999999999998766    347999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +||+++|+|.+++.+..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.+||+|||++....
T Consensus        95 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~--------gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~  166 (293)
T cd06647          95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             EecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence            9999999999999888899999999999999999999998        99999999999999999999999999986554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....|++.|+|||.+...      .++.++||||||+++||+++|          ..||.....    ..
T Consensus       167 ~~~~~----~~~~~~~~~y~~PE~~~~~------~~~~~~Dv~slG~ll~~ll~g----------~~pf~~~~~----~~  222 (293)
T cd06647         167 PEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMVEG----------EPPYLNENP----LR  222 (293)
T ss_pred             ccccc----cccccCChhhcCchhhccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCh----hh
Confidence            32221    1234688899999998765      566899999999999999999          566654311    11


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ......  ....+..+   .....+..+.+++.+||+.+|++||++.+++..
T Consensus       223 ~~~~~~--~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         223 ALYLIA--TNGTPELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             heeehh--cCCCCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111110  01112221   123355679999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.8e-37  Score=298.95  Aligned_cols=264  Identities=23%  Similarity=0.294  Sum_probs=186.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC----cc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN----SC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~----~~  206 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||.+......   ......|+..+..++||||+++++++.....    ..
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            5799999999999999999998  5889999987543221   1222345666666999999999998765432    12


Q ss_pred             cEEEeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ...++||||+.+ +|.+++...  .+++.++..++.||+.||.|||+.        +++|+||||+||+++.++.+||+|
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~i~H~dl~p~nil~~~~~~~kl~d  162 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN--------KILHRDMKAANILITKDGILKLAD  162 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHEEECCCCcEEECc
Confidence            457999999974 888888654  689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++..................++..|+|||.+.+..     .++.++||||||+++|||++|+++          |...
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~~l~el~t~~~~----------~~~~  227 (310)
T cd07865         163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER-----DYGPPIDMWGAGCIMAEMWTRSPI----------MQGN  227 (310)
T ss_pred             CCCcccccCCcccCCCCccCcccCccccCcHHhcCCc-----ccCchhhhHHHHHHHHHHHhCCCC----------CCCC
Confidence            9999766543222111223446788999999886542     345789999999999999999543          3321


Q ss_pred             CCC--------------------CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPM--------------------DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...                    ....................+...........+.+++.+||+.||++|||++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         228 TEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            100                    00000000000000000000000000112346789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.1e-37  Score=293.70  Aligned_cols=247  Identities=24%  Similarity=0.354  Sum_probs=192.1

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +|+..+.||+|+||.||++..  +++.||+|.+......  ......|+..+..++||||+++++.+...    ..++++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv   77 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN----GDISIC   77 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC----CEEEEE
Confidence            678889999999999999998  4889999988654322  12223455556668999999999998776    458999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||+++++|.+++..  ..+++..+..++.|++.||+|||+ .        +++|+||||+||++++++.+||+|||.+.
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--------~i~H~dl~~~ni~~~~~~~~~l~d~g~~~  149 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH--------KIIHRDVKPSNILVNSRGQIKLCDFGVSG  149 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC--------CeecCCCCHHHEEECCCCCEEEeecccch
Confidence            999999999999964  578999999999999999999998 7        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........      ...++..|+|||.+.+.      .++.++||||||+++|+|++|          ..||........
T Consensus       150 ~~~~~~~~------~~~~~~~y~~PE~~~~~------~~~~~~Dv~slG~~l~~l~~g----------~~p~~~~~~~~~  207 (265)
T cd06605         150 QLVNSLAK------TFVGTSSYMAPERIQGN------DYSVKSDIWSLGLSLIELATG----------RFPYPPENDPPD  207 (265)
T ss_pred             hhHHHHhh------cccCChhccCHHHHcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCccccccc
Confidence            65432211      14688899999998776      667899999999999999999          566654321111


Q ss_pred             Ch-HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SF-DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .. +.+....  ....+..+.    ...+.++.++|.+||..||++|||+.+++.
T Consensus       208 ~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         208 GIFELLQYIV--NEPPPRLPS----GKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             cHHHHHHHHh--cCCCCCCCh----hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            11 1222221  122233332    125677999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.7e-38  Score=297.04  Aligned_cols=238  Identities=18%  Similarity=0.315  Sum_probs=178.1

Q ss_pred             ceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        142 ECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.||+|+||.||+|...         ...||+|.+....... .....|+..+..++||||+++++++....    ..++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~l   76 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD----ESIM   76 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC----CcEE
Confidence            46899999999999762         2348888775432211 12233444555589999999999988763    3689


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc--------EE
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT--------CV  281 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~--------~k  281 (443)
                      ||||+++|+|.+++..  ..+++..++.++.||+.||+|||+.        +|+||||||+||+++.++.        +|
T Consensus        77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiH~dlkp~nili~~~~~~~~~~~~~~~  148 (258)
T cd05078          77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK--------GLTHGNVCAKNVLLIREEDRKTGNPPFIK  148 (258)
T ss_pred             EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCccceEEEecccccccCCCceEE
Confidence            9999999999999964  3589999999999999999999998        9999999999999987765        69


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      ++|||++.....        .....++..|+|||++.+..     .++.++||||||+++|||++|.         ..||
T Consensus       149 l~d~g~~~~~~~--------~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~~l~~l~~g~---------~~~~  206 (258)
T cd05078         149 LSDPGISITVLP--------KEILLERIPWVPPECIENPQ-----NLSLAADKWSFGTTLWEIFSGG---------DKPL  206 (258)
T ss_pred             ecccccccccCC--------chhccccCCccCchhccCCC-----CCCchhhHHHHHHHHHHHHcCC---------CCCh
Confidence            999998854432        12245788999999987641     4567999999999999999982         2344


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ....     .........   .+..+|.     ....++.+++.+||+.||++|||++++++.|+
T Consensus       207 ~~~~-----~~~~~~~~~---~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         207 SALD-----SQKKLQFYE---DRHQLPA-----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             hhcc-----HHHHHHHHH---ccccCCC-----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            3321     111111111   1222332     23467999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.3e-37  Score=295.84  Aligned_cols=247  Identities=29%  Similarity=0.396  Sum_probs=188.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..+.|+..+.||+|+||.||+|..  +++.||+|.+.......    .....|+..+..++||||+++++++.+..    
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----   88 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH----   88 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC----
Confidence            346799999999999999999987  58899999885432211    12234555666699999999999988763    


Q ss_pred             EEEeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++|+||+. |+|.+++.  ...+++..+..++.|++.||.|||+.        +|+|+||+|+||++++++.+||+||
T Consensus        89 ~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~--------~i~H~dl~p~nIl~~~~~~~kL~df  159 (307)
T cd06607          89 TAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH--------ERIHRDIKAGNILLTEPGTVKLADF  159 (307)
T ss_pred             eEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCcccEEECCCCCEEEeec
Confidence            4799999997 57777764  45699999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++......        ....|+..|+|||++.+...   ..++.++||||||+++|||+||          ..||....
T Consensus       160 g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~---~~~~~~sDv~s~G~il~el~tg----------~~p~~~~~  218 (307)
T cd06607         160 GSASLVSPA--------NSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAER----------KPPLFNMN  218 (307)
T ss_pred             CcceecCCC--------CCccCCccccCceeeeccCC---CCCCcccchHHHHHHHHHHHcC----------CCCCCCcc
Confidence            998654321        23467889999998853211   1566899999999999999999          56665431


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                           ......... ....+..+    ....+..+.+++.+||+.||++||++.+|+..
T Consensus       219 -----~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         219 -----AMSALYHIA-QNDSPTLS----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             -----HHHHHHHHh-cCCCCCCC----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                 111111111 11122222    23356789999999999999999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.2e-37  Score=303.87  Aligned_cols=265  Identities=19%  Similarity=0.258  Sum_probs=192.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||+|++.....   .......|+..+..++||||+++++++.........+
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36899999999999999999987  589999998865322   1122234566666699999999999877554444568


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+. |+|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+||++++++.+||+|||++
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~Nil~~~~~~~kl~dfg~~  154 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA--------NVIHRDLKPSNLLVNEDCELRIGDFGMA  154 (334)
T ss_pred             EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCcEEecccccc
Confidence            99999996 69999885 45689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..................|+..|+|||.+....     .++.++||||||+++|||++|+          .||.......
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-----~~~~~~Di~slG~~l~el~~g~----------~pf~~~~~~~  219 (334)
T cd07855         155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLP-----EYTTAIDMWSVGCIFAEMLGRR----------QLFPGKNYVH  219 (334)
T ss_pred             eeecccCcCCCcccccccccccccChHHhcCCc-----ccccccchHHHHHHHHHHHcCC----------CccCCCChHH
Confidence            765443222211123447889999999986531     4568999999999999999994          4443321000


Q ss_pred             -------------------CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 -------------------PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                                         ...................+-.......+..+.+++++||+.||++|||+.+++.
T Consensus       220 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         220 QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                               0000011111100111111100001224678999999999999999999999887

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.4e-37  Score=292.03  Aligned_cols=244  Identities=25%  Similarity=0.297  Sum_probs=192.4

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +|++.+.||.|+||.||+|..  +++.||+|.+......    ......|+..+..++||||+++++.+...    ..++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   76 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE----ENMY   76 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC----CeEE
Confidence            478899999999999999998  4899999988653321    12234566666679999999999988765    4589


Q ss_pred             eeecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +|+||+.+++|.+++... .+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.++|+|||++.
T Consensus        77 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~~~nil~~~~~~~~l~d~~~~~  148 (258)
T cd05578          77 LVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK--------GIIHRDIKPDNILLDEQGHVHITDFNIAT  148 (258)
T ss_pred             EEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHeEEcCCCCEEEeeccccc
Confidence            999999999999999765 899999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .......     .....|+..|+|||.+...      .++.++|+||||+++|+|++|          ..||......  
T Consensus       149 ~~~~~~~-----~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~g----------~~p~~~~~~~--  205 (258)
T cd05578         149 KVTPDTL-----TTSTSGTPGYMAPEVLCRQ------GYSVAVDWWSLGVTAYECLRG----------KRPYRGHSRT--  205 (258)
T ss_pred             ccCCCcc-----ccccCCChhhcCHHHHccc------CCCCcccchhhHHHHHHHHhC----------CCCCCCCCcc--
Confidence            6543221     1234688899999998776      566899999999999999999          6677654221  


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH--HHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA--LRVK  422 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~--~evl  422 (443)
                      ....+......  ..+..+     ...+..+.+++.+||+.||.+||++  +|++
T Consensus       206 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         206 IRDQIRAKQET--ADVLYP-----ATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHHhcc--ccccCc-----ccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            12222222211  222333     2355789999999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.6e-37  Score=293.10  Aligned_cols=246  Identities=25%  Similarity=0.405  Sum_probs=190.5

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .|...+.||+|++|.||++..  +++.+|+|.+....... .....|+..+..++||||+++++++...    ...++++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~----~~~~~v~   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG----DELWVVM   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC----CeEEEEE
Confidence            455567999999999999987  57899999875433221 1223455566668999999999988765    4579999


Q ss_pred             cccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      ||+++++|.+++....+++..+..++.|++.||+|||+.        +++||||+|+||+++.++.++|+|||++.....
T Consensus        96 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648          96 EFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ--------GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             eccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            999999999999888899999999999999999999998        999999999999999999999999998865543


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ....    .....|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||....    ....
T Consensus       168 ~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slGv~l~ell~g----------~~p~~~~~----~~~~  223 (285)
T cd06648         168 EVPR----RKSLVGTPYWMAPEVISRL------PYGTEVDIWSLGIMVIEMVDG----------EPPYFNEP----PLQA  223 (285)
T ss_pred             CCcc----cccccCCccccCHHHhcCC------CCCCcccHHHHHHHHHHHHhC----------CCCCcCCC----HHHH
Confidence            2211    1234688999999998765      566899999999999999999          66665421    1122


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..... . ...+....   ....+..+.+++.+||+.||++|||+.++++
T Consensus       224 ~~~~~-~-~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         224 MKRIR-D-NLPPKLKN---LHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHH-h-cCCCCCcc---cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            22211 1 11111111   1225578999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4e-37  Score=293.49  Aligned_cols=249  Identities=29%  Similarity=0.465  Sum_probs=195.6

Q ss_pred             hhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..+.|+..+.||+|+||.||+|.+.  +..||+|++..........+.|+..+..++|+||+++++.+...    ...++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~l   92 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG----DELWV   92 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----CEEEE
Confidence            3467899999999999999999984  88999999865543222334566666679999999999998776    45799


Q ss_pred             eecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++||+++++|.+++...  .+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|||++.
T Consensus        93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~--------gi~H~dl~p~ni~i~~~~~~~l~d~~~~~  164 (286)
T cd06614          93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ--------NVIHRDIKSDNILLSKDGSVKLADFGFAA  164 (286)
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCChhhEEEcCCCCEEECccchhh
Confidence            99999999999999765  799999999999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+.      .++.++||||||+++|||++|          ..||....    
T Consensus       165 ~~~~~~~~----~~~~~~~~~y~~PE~~~~~------~~~~~~Dv~slGvil~~l~~g----------~~p~~~~~----  220 (286)
T cd06614         165 QLTKEKSK----RNSVVGTPYWMAPEVIKRK------DYGPKVDIWSLGIMCIEMAEG----------EPPYLREP----  220 (286)
T ss_pred             hhccchhh----hccccCCcccCCHhHhcCC------CCCCccccHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            55432211    1233578899999998765      567899999999999999999          66765431    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .........  ....+....   ...++..+.+++.+||+.+|.+|||+.++++
T Consensus       221 ~~~~~~~~~--~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         221 PLRALFLIT--TKGIPPLKN---PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHHH--hcCCCCCcc---hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            111222211  111111111   1225678999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=9.7e-38  Score=297.46  Aligned_cols=253  Identities=24%  Similarity=0.338  Sum_probs=187.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+  +++.||+|++.......   .....|+..+..++||||+++++++...    ...+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   76 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK----KRLY   76 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC----CeEE
Confidence            3688899999999999999998  47899999875432221   1223455566669999999999998765    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +|+||+++++|..+... ..+++.+++.++.||+.||+|||+.        +++|+||+|+||++++++.+||+|||++.
T Consensus        77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~h~~l~p~ni~~~~~~~~~l~dfg~~~  148 (286)
T cd07846          77 LVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH--------NIIHRDIKPENILVSQSGVVKLCDFGFAR  148 (286)
T ss_pred             EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEECCCCcEEEEeeeeee
Confidence            99999999999887754 4699999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .+......    .....++..|+|||++.+..     .++.++||||||+++|||++|+          .||....    
T Consensus       149 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~~l~el~~g~----------~~~~~~~----  205 (286)
T cd07846         149 TLAAPGEV----YTDYVATRWYRAPELLVGDT-----KYGRAVDIWAVGCLVTEMLTGE----------PLFPGDS----  205 (286)
T ss_pred             eccCCccc----cCcccceeeccCcHHhcccc-----ccCchHhHHHHHHHHHHHHcCC----------CCCCCCc----
Confidence            65432211    12346788999999986531     3557899999999999999994          4443211    


Q ss_pred             ChHHHHhhhhhc-------------------CCCCCCCC----CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICID-------------------QQRPVLPN----RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~-------------------~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.........                   ...+....    .......+..+.+++.+||+.||++||++.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         206 DIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            111111111000                   00000000    0001234677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-37  Score=304.59  Aligned_cols=270  Identities=23%  Similarity=0.299  Sum_probs=193.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCC-cccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRN-SCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~~~~  209 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||+|.+......  ......|+..+..++||||+++++++..... .....
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999987  6889999988543222  1223456666667999999999988654421 22457


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++|+||+. ++|.+++....+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~--------~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          84 YIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             EEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHEEECCCCCEEECccccee
Confidence            99999997 4999999888899999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC---
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP---  366 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~---  366 (443)
                      .......... ......||..|+|||.+.+..     .++.++|||||||++|||++|+          .||.+...   
T Consensus       155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwslGvil~el~~G~----------~~f~~~~~~~~  218 (336)
T cd07849         155 IADPEHDHTG-FLTEYVATRWYRAPEIMLNSK-----GYTKAIDIWSVGCILAEMLSNR----------PLFPGKDYLHQ  218 (336)
T ss_pred             eccccccccC-CcCCcCcCCCccChHHhhCCC-----CCCcHHHHHHHHHHHHHHHhCC----------CCCCCCCHHHH
Confidence            6543222111 123346889999999875431     4567999999999999999994          44433110   


Q ss_pred             --------CCCChHHHHhhhh--------hcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH--HHHH
Q psy14889        367 --------MDPSFDDMRKVIC--------IDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT--LIKL  428 (443)
Q Consensus       367 --------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~l  428 (443)
                              ..+..+.......        .....+..+........+.++.+++.+||+.||++|||+.++++.  ++..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         219 LNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence                    0000011110000        000000000000001234678999999999999999999999886  5544


Q ss_pred             h
Q psy14889        429 A  429 (443)
Q Consensus       429 ~  429 (443)
                      .
T Consensus       299 ~  299 (336)
T cd07849         299 H  299 (336)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=6e-37  Score=288.18  Aligned_cols=249  Identities=28%  Similarity=0.411  Sum_probs=196.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +|++.+.||+|++|.||+|..  +++.||||++.....  .....+.|+..+..++|+||+++++++...    ..+++|
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv   77 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE----GEISIV   77 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC----CeEEEE
Confidence            688899999999999999988  489999998865543  223345666666668999999999998776    458999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||+++++|.+++.. ..+++..+..++.|++.||.|||+ .        +++|+||+|+||+++.++.++|+|||++..
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--------~~~H~~l~~~ni~~~~~~~~~l~df~~~~~  149 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR--------HIIHRDIKPSNLLINSKGEVKIADFGISKV  149 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC--------CCccCCCCHHHEEECCCCCEEEccCcccee
Confidence            999999999999965 779999999999999999999998 8        999999999999999999999999999876


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ........    ....++..|+|||.+...      .++.++|+||||+++|||+||          ..||.....  ..
T Consensus       150 ~~~~~~~~----~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~tg----------~~p~~~~~~--~~  207 (264)
T cd06623         150 LENTLDQC----NTFVGTVTYMSPERIQGE------SYSYAADIWSLGLTLLECALG----------KFPFLPPGQ--PS  207 (264)
T ss_pred             cccCCCcc----cceeecccccCHhhhCCC------CCCchhhHHHHHHHHHHHHhC----------CCCCccccc--cC
Confidence            65432221    234678899999998776      566899999999999999999          566655321  12


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .......+. ....+..+.    ...+..+.+++.+||+.+|++|||+.++++.
T Consensus       208 ~~~~~~~~~-~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         208 FFELMQAIC-DGPPPSLPA----EEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHh-cCCCCCCCc----ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            223333222 112222221    1156789999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG4645|consensus

Probab=100.00  E-value=3.5e-39  Score=335.90  Aligned_cols=252  Identities=28%  Similarity=0.439  Sum_probs=201.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-----cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .-+++....||.|.||.||-|..  +|...|+|-+.....     ....+|..++..  ++|||+|+++|+-.+.+    
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~--lnHpNlV~YyGVEvHRe---- 1307 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEG--LNHPNLVRYYGVEVHRE---- 1307 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHh--ccCccccccCceeecHH----
Confidence            34667778999999999999987  789999997643322     223334444444  99999999999987774    


Q ss_pred             EEEeeecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++|.||||.+|+|.+.+..++ .++.....+..|++.|++|||++        |||||||||.||+++.+|.+|++|||
T Consensus      1308 kv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~--------gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH--------GIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred             HHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc--------CceecCCCccceeeecCCcEEeeccc
Confidence            4799999999999999997654 45555667889999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      .|..+...............||+.|||||++.+....   .-.-+.||||+|||+.||+||          +.||...  
T Consensus      1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~k---G~~~A~DiWslGCVVlEM~tG----------krPW~~~-- 1444 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGK---GHGGAADIWSLGCVVLEMATG----------KRPWAEL-- 1444 (1509)
T ss_pred             ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccC---CCCcchhhhcccceEEEeecC----------CCchhhc--
Confidence            9988876543333333456899999999999876432   333589999999999999999          7788775  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       +..+..+....  .+..|++|..     .+.+-.+++.+||..||+.|.++.|+++
T Consensus      1445 -dne~aIMy~V~--~gh~Pq~P~~-----ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1445 -DNEWAIMYHVA--AGHKPQIPER-----LSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             -cchhHHHhHHh--ccCCCCCchh-----hhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence             34555555543  3567777753     7788999999999999999998887765

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-37  Score=288.08  Aligned_cols=250  Identities=26%  Similarity=0.393  Sum_probs=193.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|.+.+.||+|+||.||+|..  +++.||+|.+....      ......+.|+..+..++|+||+++++++.+...  .
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~--~   79 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE--K   79 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC--C
Confidence            5789999999999999999987  58899999874321      111233456667777999999999998766543  4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++++||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.++|+|||
T Consensus        80 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~--------~i~H~dl~p~ni~i~~~~~~~l~dfg  151 (264)
T cd06653          80 KLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN--------MIVHRDIKGANILRDSAGNVKLGDFG  151 (264)
T ss_pred             EEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEEcCCCCEEECccc
Confidence            57899999999999999864 5689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........ ........|+..|+|||.+.+.      .++.++|+|||||++|||++|          ..||.+.. 
T Consensus       152 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~-  213 (264)
T cd06653         152 ASKRIQTICMS-GTGIKSVTGTPYWMSPEVISGE------GYGRKADVWSVACTVVEMLTE----------KPPWAEYE-  213 (264)
T ss_pred             ccccccccccc-CccccccCCcccccCHhhhcCC------CCCccccHHHHHHHHHHHHhC----------CCCCCccC-
Confidence            99765432111 1111234688999999998765      566899999999999999999          66775531 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ....+.+.. ....++.+|     ...++.+.+++.+||+ +|..||++.+++.
T Consensus       214 ---~~~~~~~~~-~~~~~~~~p-----~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         214 ---AMAAIFKIA-TQPTKPMLP-----DGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             ---HHHHHHHHH-cCCCCCCCC-----cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence               122222222 112222233     4466789999999999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1035|consensus

Probab=100.00  E-value=7.4e-38  Score=324.57  Aligned_cols=257  Identities=23%  Similarity=0.380  Sum_probs=191.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccC------
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSR------  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~------  203 (443)
                      ...+|+..+.||+||||.||+++.  +|+.+|||++..+....  ...-+|+..+.+|+|||||+++..+.+..      
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            446788999999999999999986  89999999986654222  22245788888899999999986332100      


Q ss_pred             --------------------------------------------------------------------------------
Q psy14889        204 --------------------------------------------------------------------------------  203 (443)
Q Consensus       204 --------------------------------------------------------------------------------  203 (443)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             --------------------C---------cccEEEeeecccCcccHHHHhcccCCC--HHHHHHHHHHHHHHHHHHHHc
Q psy14889        204 --------------------N---------SCTQLWLVTHYHSFGSLYDHLNRTTLN--HHQMMKICLSIVNGLVHLHTE  252 (443)
Q Consensus       204 --------------------~---------~~~~~~lv~e~~~~gsL~~~l~~~~l~--~~~~~~i~~qia~gL~yLH~~  252 (443)
                                          +         ....+||-||||+.-.|++++++..+.  ....++++++|+.||.|+|+.
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~  716 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ  716 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence                                0         002479999999998888888776664  778899999999999999999


Q ss_pred             hhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc--------------cCCcCCCCCCCcccccCcccccccc
Q psy14889        253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ--------------LSNKMDIPPNPRVGTKRYMSPEILD  318 (443)
Q Consensus       253 ~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~--------------~~~~~~~~~~~~~gt~~y~aPE~~~  318 (443)
                              |||||||||.||++|++..+||+|||+|.....              .....+...+..+||.-|+|||++.
T Consensus       717 --------giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~  788 (1351)
T KOG1035|consen  717 --------GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS  788 (1351)
T ss_pred             --------ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence                    999999999999999999999999999976220              0111111335678999999999998


Q ss_pred             cccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCC--CCCchh
Q psy14889        319 ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR--WVSDST  396 (443)
Q Consensus       319 ~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  396 (443)
                      +...   ..|+.|+|+||+|||++||+             .||.-      ..+....+...  ..+.+|..  +..+ .
T Consensus       789 ~~~~---~~Yn~KiDmYSLGIVlFEM~-------------yPF~T------sMERa~iL~~L--R~g~iP~~~~f~~~-~  843 (1351)
T KOG1035|consen  789 DTSS---NKYNSKIDMYSLGIVLFEML-------------YPFGT------SMERASILTNL--RKGSIPEPADFFDP-E  843 (1351)
T ss_pred             cccc---ccccchhhhHHHHHHHHHHh-------------ccCCc------hHHHHHHHHhc--ccCCCCCCcccccc-c
Confidence            7632   26889999999999999996             35543      22222222222  23444432  2222 3


Q ss_pred             HHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        397 LNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       397 ~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...-..+|+++++.||.+||||.|+++
T Consensus       844 ~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  844 HPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            345678999999999999999999886

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=6.4e-37  Score=289.34  Aligned_cols=241  Identities=22%  Similarity=0.275  Sum_probs=185.0

Q ss_pred             cccccccee--eeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECI--GKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~l--G~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|.+.+.+  |+|+||.||++..  ++..+|+|.........  .|.++.... .+||||+++++.+...    ..+++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~-~~h~~iv~~~~~~~~~----~~~~i   86 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLM-KDNPNFIKLYYSVTTL----KGHVL   86 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHh-hcCCCEEEEEEEEecC----CeeEE
Confidence            466666665  9999999999987  57889999875432221  133332221 3799999999998776    35899


Q ss_pred             eecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~  289 (443)
                      ||||+++|+|.++++.. .+++..+..++.|+++||.|||+.        +++||||||+||+++.++ .++|+|||++.
T Consensus        87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~nil~~~~~~~~~l~dfg~~~  158 (267)
T PHA03390         87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH--------NIIHNDIKLENVLYDRAKDRIYLCDYGLCK  158 (267)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence            99999999999999764 799999999999999999999998        999999999999999998 99999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .....        ....|+..|+|||++.+.      .++.++||||||+++|||++|          ..||........
T Consensus       159 ~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~~l~~g----------~~p~~~~~~~~~  214 (267)
T PHA03390        159 IIGTP--------SCYDGTLDYFSPEKIKGH------NYDVSFDWWAVGVLTYELLTG----------KHPFKEDEDEEL  214 (267)
T ss_pred             ecCCC--------ccCCCCCcccChhhhcCC------CCCchhhHHHHHHHHHHHHHC----------CCCCCCCCcchh
Confidence            55422        123578899999999775      667899999999999999999          667764322211


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-HHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-ALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~  423 (443)
                      .........   ......+     ...+..+.+++.+||+.||.+||+ ++++++
T Consensus       215 ~~~~~~~~~---~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        215 DLESLLKRQ---QKKLPFI-----KNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             hHHHHHHhh---cccCCcc-----cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            122222221   1111111     236678999999999999999996 588874

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-37  Score=296.25  Aligned_cols=253  Identities=23%  Similarity=0.303  Sum_probs=184.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|.+......  ......|+..+..++|+||+++++++.+.    ...++
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~l   80 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK----KTLTL   80 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC----CeEEE
Confidence            6799999999999999999987  5889999988643221  12233456666669999999999998765    45799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||+.+ +|.+++.+  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||+++
T Consensus        81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~--------~i~H~dl~p~nil~~~~~~~kl~dfg~~~  151 (291)
T cd07844          81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR--------RVLHRDLKPQNLLISERGELKLADFGLAR  151 (291)
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecccCCHHHEEEcCCCCEEECcccccc
Confidence            9999984 99998864  4689999999999999999999998        99999999999999999999999999986


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.....   
T Consensus       152 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Dv~slG~il~~l~~g----------~~~~~~~~~---  209 (291)
T cd07844         152 AKSVPSKT----YSNEVVTLWYRPPDVLLGST-----EYSTSLDMWGVGCIFYEMATG----------RPLFPGSTD---  209 (291)
T ss_pred             ccCCCCcc----ccccccccccCCcHHhhcCc-----ccCcHHHHHHHHHHHHHHHhC----------CCCCCCCcc---
Confidence            54321111    12234678999999987531     456799999999999999999          445543210   


Q ss_pred             ChHHHHhhhhhcC----------------CC--------CCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQ----------------QR--------PVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~----------------~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+........                ..        ..+............+.+++.+||+.||++|||+.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         210 VEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            0011110000000                00        000000000111256889999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=3.5e-37  Score=288.70  Aligned_cols=244  Identities=26%  Similarity=0.416  Sum_probs=188.9

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||+|..  +|..+|+|.+....   ......+.|+..+..++|+||+++++.+...    ...++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~----~~~~l   76 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN----GRLFI   76 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC----CeEEE
Confidence            478889999999999999998  57899999885532   1222234566666679999999999988765    45799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGl  287 (443)
                      |+||+++++|.+++.+   ..+++..+..++.|++.||.|||+.        +++|+||||+||++++++ .+||+|||.
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~H~dl~~~nil~~~~~~~~~l~d~~~  148 (257)
T cd08225          77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR--------KILHRDIKSQNIFLSKNGMVAKLGDFGI  148 (257)
T ss_pred             EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCCHHHEEEcCCCCeEEeccccc
Confidence            9999999999999864   2479999999999999999999998        999999999999999886 569999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........    .....|++.|+|||.+.+.      .++.++|+||||+++|||++|          ..||....  
T Consensus       149 ~~~~~~~~~~----~~~~~~~~~~~ape~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~--  206 (257)
T cd08225         149 ARQLNDSMEL----AYTCVGTPYYLSPEICQNR------PYNNKTDIWSLGCVLYELCTL----------KHPFEGNN--  206 (257)
T ss_pred             chhccCCccc----ccccCCCccccCHHHHcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCcc--
Confidence            8766432211    1223588899999998765      566899999999999999999          66665421  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ..+...... . ...+..     ....+..+.+++.+||+.+|++|||+.++++
T Consensus       207 --~~~~~~~~~-~-~~~~~~-----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         207 --LHQLVLKIC-Q-GYFAPI-----SPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             --HHHHHHHHh-c-ccCCCC-----CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence              111222211 1 111111     1235567999999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.7e-38  Score=320.88  Aligned_cols=258  Identities=21%  Similarity=0.252  Sum_probs=179.3

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC---CceeEEE------------------EeeccCccchHHHHHHHHHHhccCCC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH---GENVAVK------------------IFFSRDEASWSRETEIYSTVLLRHEN  191 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~vAvK------------------~~~~~~~~~~~~e~ei~~~~~l~H~n  191 (443)
                      .+.++|++.+.||+|+||+||++.+.   +...++|                  .+..........+.|+..+..++|||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            34578999999999999999998752   2222222                  11111112223356777777799999


Q ss_pred             ceeeeeeccccCCcccEEEeeecccCcccHHHHhcccC------CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT------LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       192 Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      |+++++++....    ..++|+|++. ++|.+++....      .....+..++.||+.||.|||+.        +|+||
T Consensus       225 Iv~l~~~~~~~~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~--------gIiHr  291 (501)
T PHA03210        225 ILKIEEILRSEA----NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK--------KLIHR  291 (501)
T ss_pred             cCcEeEEEEECC----eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC--------CeecC
Confidence            999999987763    4689999986 58888775432      33566788999999999999998        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.+.......   .....||..|+|||++.+.      .++.++|||||||++|||+
T Consensus       292 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~ell  362 (501)
T PHA03210        292 DIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF---DYGWVGTVATNSPEILAGD------GYCEITDIWSCGLILLDML  362 (501)
T ss_pred             CCCHHHEEECCCCCEEEEeCCCceecCcccccc---cccccCCcCCCCchhhcCC------CCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999998765432211   2345799999999999876      6778999999999999999


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhh------------------------cCCCCCCCCCCCCchhHHHHH
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICI------------------------DQQRPVLPNRWVSDSTLNAMT  401 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~  401 (443)
                      +|..         .||..... . ....+.+.+..                        ......++..+.....+..+.
T Consensus       363 ~~~~---------~p~~~~~~-~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (501)
T PHA03210        363 SHDF---------CPIGDGGG-K-PGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFE  431 (501)
T ss_pred             HCCC---------CCccCCCC-C-HHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHH
Confidence            9842         12221100 0 01111111100                        000001111111112345678


Q ss_pred             HHHHHHhcCCcCCCCcHHHHHH
Q psy14889        402 KVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       402 ~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +++.+||+.||++|||+.|+++
T Consensus       432 ~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        432 YPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHhccCcccCcCHHHHhh
Confidence            8899999999999999999986

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5e-37  Score=292.37  Aligned_cols=251  Identities=25%  Similarity=0.345  Sum_probs=185.7

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|+..+.||+|+||.||+|..  +|+.||||.+......   ....+.|+..+..++||||+++++++.+.    ...++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~~   76 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE----NKLYL   76 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC----CcEEE
Confidence            478889999999999999987  5889999987543221   12334566677779999999999998765    35799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+. ++|.+++..   ..+++..+..++.|++.||+|||+.        +++|+||+|+||+++.++.+||+|||++
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~i~H~~l~p~nill~~~~~~~l~dfg~~  147 (284)
T cd07860          77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH--------RVLHRDLKPQNLLINTEGAIKLADFGLA  147 (284)
T ss_pred             Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEEeeccch
Confidence            999996 689888853   5689999999999999999999988        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....++..|+|||.+.+..     .++.++||||||+++|||+||          ..||....   
T Consensus       148 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~il~~l~tg----------~~p~~~~~---  205 (284)
T cd07860         148 RAFGVPVRT----YTHEVVTLWYRAPEILLGCK-----YYSTAVDIWSLGCIFAEMVTR----------RALFPGDS---  205 (284)
T ss_pred             hhcccCccc----cccccccccccCCeEEecCC-----CCCcHHHHHHHHHHHHHHHHC----------CCCCCCCC---
Confidence            765432211    12335678999999887542     345789999999999999999          55554321   


Q ss_pred             CChHHHHhhhhhcCCC---------------CCCCCC---C---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQR---------------PVLPNR---W---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~---------------~~~~~~---~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ......+........               ..++..   .   .....+.++.+++.+||+.||++|||+.++++
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         206 -EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             -HHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence             111111111100000               000000   0   00124467889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=3.2e-37  Score=295.25  Aligned_cols=254  Identities=24%  Similarity=0.324  Sum_probs=187.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+  +++.+|+|.+.......   .....|+..+..++||||+++++++.....  ...+
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL--DKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC--CcEE
Confidence            5788999999999999999998  47899999886443221   122345666666999999999998876532  4589


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+. ++|.+++..  ..+++..++.++.||+.||+|||+.        +++|+||||+||+++.++.+||+|||++
T Consensus        83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~i~H~dl~p~nili~~~~~~~l~d~g~~  153 (293)
T cd07843          83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN--------WILHRDLKTSNLLLNNRGILKICDFGLA  153 (293)
T ss_pred             EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCCHHHEEECCCCcEEEeecCce
Confidence            9999998 499998864  3589999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....++..|+|||.+.+..     .++.++|+||||+++|||++|.          .||.....  
T Consensus       154 ~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~~g~----------~~f~~~~~--  212 (293)
T cd07843         154 REYGSPLKP----YTQLVVTLWYRAPELLLGAK-----EYSTAIDMWSVGCIFAELLTKK----------PLFPGKSE--  212 (293)
T ss_pred             eeccCCccc----cccccccccccCchhhcCCc-----cccchhhHHHHHHHHHHHHhCC----------CCCCCCCh--
Confidence            766543211    12345788999999987542     3457999999999999999994          44433211  


Q ss_pred             CChHHHHhhhhh------------------c-----CCCC-CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICI------------------D-----QQRP-VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~------------------~-----~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        .....+....                  .     .... .+...+.....++.+.+++++||+.||++|||+.|+++
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         213 --IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             --HHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence              1111110000                  0     0000 00000111113567899999999999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0596|consensus

Probab=100.00  E-value=1.1e-37  Score=299.88  Aligned_cols=252  Identities=20%  Similarity=0.355  Sum_probs=187.4

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccC-----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRD-----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~-----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ...|++.++||+||.+.||++.. +.+.+|+|.+....     .+.+..|.+++...+ .|.+||++++|-..+    ..
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-g~~~IIqL~DYEv~d----~~  434 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK-GHDKIIQLYDYEVTD----GY  434 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-CCceEEEEeeeeccC----ce
Confidence            35699999999999999999988 45677887653322     223445555555432 589999999998775    67


Q ss_pred             EEeeecccCcccHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~--l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +||||||-+ -||..+|++..  +..-.+..+..|++.++.++|.+        ||||.||||.|+|+- .|.+||+|||
T Consensus       435 lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~--------gIVHSDLKPANFLlV-kG~LKLIDFG  504 (677)
T KOG0596|consen  435 LYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH--------GIVHSDLKPANFLLV-KGRLKLIDFG  504 (677)
T ss_pred             EEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh--------ceeecCCCcccEEEE-eeeEEeeeec
Confidence            999999865 59999998644  23238888999999999999999        999999999999984 6789999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCccccccccccccc-----CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-----DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-----~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      +|..+..+....  -....+||+.||+||.+......     .....+.+|||||+||+||+|+.|          +.||
T Consensus       505 IA~aI~~DTTsI--~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYg----------ktPf  572 (677)
T KOG0596|consen  505 IANAIQPDTTSI--VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYG----------KTPF  572 (677)
T ss_pred             hhcccCccccce--eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhc----------CCch
Confidence            998887655433  23456899999999999754322     123567899999999999999999          6676


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCC--CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRP--VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+..      ..+.+.........  .+|.    .....++.++|+.||..||++|||..++++
T Consensus       573 ~~~~------n~~aKl~aI~~P~~~Iefp~----~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  573 GQII------NQIAKLHAITDPNHEIEFPD----IPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHH------HHHHHHHhhcCCCccccccC----CCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            6531      11222211111111  2222    112234999999999999999999999986

>KOG0586|consensus

Probab=100.00  E-value=7.9e-38  Score=305.70  Aligned_cols=245  Identities=24%  Similarity=0.340  Sum_probs=198.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch---HHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW---SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~---~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ...|.+...||+|.|+.|.+|.+  ++..||||.+.+......   ..-+|+..++.++|||||+++.+....    ..+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~----~~l  130 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE----ATL  130 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec----cee
Confidence            36799999999999999999998  799999998866543322   223566666679999999999998877    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||||+.+|.+++|+.+ +.+.+..+..++.|+.+|++|||++        .|+|||||++||||+.+..+||+|||++
T Consensus       131 ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k--------~ivHrdLk~eNilL~~~mnikIaDfgfS  202 (596)
T KOG0586|consen  131 YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK--------NIVHRDLKAENILLDENMNIKIADFGFS  202 (596)
T ss_pred             EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc--------ceeccccchhhcccccccceeeeccccc
Confidence            999999999999999964 6678889999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+.....     ..+.+|++.|.|||++.+...     .++++|+||+|+++|-|+.|          ..||.+..   
T Consensus       203 ~~~~~~~~-----lqt~cgsppyAaPEl~~g~~y-----~gpe~D~Wslgvvly~LV~G----------sLPFDG~~---  259 (596)
T KOG0586|consen  203 TFFDYGLM-----LQTFCGSPPYAAPELFNGKKY-----DGPEVDIWSLGVVLYALVEG----------SLPFDGQN---  259 (596)
T ss_pred             eeeccccc-----ccccCCCCCccChHhhcCccc-----CCcceehhhhhhhheeeeec----------ccccCCcc---
Confidence            87764332     245689999999999998742     23799999999999999999          78887642   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ..+++..+.....+  +|     ...+.+..++|+++|..+|.+|++++++.+
T Consensus       260 --lk~Lr~rvl~gk~r--Ip-----~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  260 --LKELRPRVLRGKYR--IP-----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             --cccccchheeeeec--cc-----ceeechhHHHHHHhhccCccccCCHHHhhh
Confidence              22222222222222  22     224557899999999999999999999876

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=5.7e-37  Score=292.63  Aligned_cols=253  Identities=23%  Similarity=0.367  Sum_probs=185.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|...+.||+|+||.||++..  +++.||+|.+......  ......|+..+..+. |+||+++++++....    ..+
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~----~~~   79 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG----DCW   79 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC----cEE
Confidence            4677788999999999999988  5789999988643322  222344555555565 999999999887653    468


Q ss_pred             eeecccCcccHHHHh---c---ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        211 LVTHYHSFGSLYDHL---N---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       211 lv~e~~~~gsL~~~l---~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++|||+.. +|.++.   .   ...+++..+..++.|++.||+|||+..       +++||||||+||+++.++.+||+|
T Consensus        80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~-------~i~H~dlkp~Nil~~~~~~~kl~d  151 (288)
T cd06616          80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL-------KIIHRDVKPSNILLDRNGNIKLCD  151 (288)
T ss_pred             EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC-------CeeccCCCHHHEEEccCCcEEEee
Confidence            99999874 554432   1   356999999999999999999999742       899999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+.....     .....|+..|+|||.+.+...   ..++.++|||||||++|||++|          ..||...
T Consensus       152 fg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g----------~~p~~~~  213 (288)
T cd06616         152 FGISGQLVDSIA-----KTRDAGCRPYMAPERIDPSAR---DGYDVRSDVWSLGITLYEVATG----------KFPYPKW  213 (288)
T ss_pred             cchhHHhccCCc-----cccccCccCccCHHHhccccc---cCCcchhhhhHHHHHHHHHHhC----------CCCchhc
Confidence            999876543221     123368889999999875420   1456899999999999999999          6676543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .   ...+.+.+...  ...+.++.. ....++.++.+|+.+||+.||++|||+++|++.
T Consensus       214 ~---~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         214 N---SVFDQLTQVVK--GDPPILSNS-EEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             c---hHHHHHhhhcC--CCCCcCCCc-CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1   11122222211  112222211 113467789999999999999999999998874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.2e-36  Score=289.34  Aligned_cols=250  Identities=23%  Similarity=0.298  Sum_probs=183.0

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|+||.||+|..  +++.||+|++.....  .......|+..+..+ +|+||+++++++.+...  ..+++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKT--GRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCC--CcEEEE
Confidence            56788999999999999987  688999998765321  222223455555556 49999999999876532  357999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||++ |+|.+++..  ..+++.++..++.|++.||.|||+.        +++||||||+||+++. +.+||+|||+++.
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~  148 (282)
T cd07831          79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN--------GIFHRDIKPENILIKD-DILKLADFGSCRG  148 (282)
T ss_pred             EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecccCHHHEEEcC-CCeEEEecccccc
Confidence            99997 588888864  4689999999999999999999998        9999999999999999 9999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      +......     ....++..|+|||.+....     .++.++|||||||++|||++|          ..||.....    
T Consensus       149 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slGv~l~el~~~----------~~p~~~~~~----  204 (282)
T cd07831         149 IYSKPPY-----TEYISTRWYRAPECLLTDG-----YYGPKMDIWAVGCVFFEILSL----------FPLFPGTNE----  204 (282)
T ss_pred             cccCCCc-----CCCCCCcccCChhHhhcCC-----CCCcchhHHHHHHHHHHHHcC----------CcCCCCCCH----
Confidence            6432211     2245788999999875431     456799999999999999999          555544211    


Q ss_pred             hHHHHhhhhh--------------c-CCCCCCCCCC------CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICI--------------D-QQRPVLPNRW------VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~--------------~-~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+........              . ......+...      .....+..+.+++.+||+.||++|||+.++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         205 LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            1111111000              0 0000111100      01235678999999999999999999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.1e-36  Score=289.60  Aligned_cols=240  Identities=26%  Similarity=0.386  Sum_probs=181.0

Q ss_pred             eeeeecCeEEEEEEE--CCceeEEEEeeccCcc----c--hHHHHHHHHH-HhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        143 CIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----S--WSRETEIYST-VLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~--~~~e~ei~~~-~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .||+|+||.||++..  +++.+|+|.+......    .  ...+..+... ...+||||+.+++++...    ...++||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~   76 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP----DKLCFIL   76 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC----CeEEEEE
Confidence            489999999999987  5789999988543211    1  1122222222 224799999999988765    3579999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+|||+++++.+||+|||++....
T Consensus        77 e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~--------~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          77 DLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR--------FVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            99999999998864 5699999999999999999999998        99999999999999999999999999986553


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ...      .....||..|+|||.+..+.     .++.++|||||||++|||++|          ..||......  ...
T Consensus       149 ~~~------~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~~g----------~~pf~~~~~~--~~~  205 (279)
T cd05633         149 KKK------PHASVGTHGYMAPEVLQKGT-----AYDSSADWFSLGCMLFKLLRG----------HSPFRQHKTK--DKH  205 (279)
T ss_pred             ccC------ccCcCCCcCccCHHHhcCCC-----CCCchhhhHHHHHHHHHHHhC----------CCCcCCCCCc--CHH
Confidence            221      12346899999999986431     456899999999999999999          6677553221  122


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                      .......  .....++     ...+.++.+++.+||+.||++||     |+.++++.
T Consensus       206 ~~~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         206 EIDRMTL--TVNVELP-----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHhh--cCCcCCc-----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            2222211  1122222     33567899999999999999999     58888773

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.4e-36  Score=298.67  Aligned_cols=256  Identities=24%  Similarity=0.343  Sum_probs=188.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|+..+.||+|+||.||+|..  +|+.||+|++.....   .......|+..+..++||||+++++++.....  ..
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            447899999999999999999987  689999998754221   11122345666666999999999998764432  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ...++||||+. ++|.+.+... +++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+||+|||
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~--------gi~H~dlkp~Nil~~~~~~~kL~Dfg  163 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFG  163 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHEEECCCCCEEEccCc
Confidence            34799999997 5888888654 89999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......     .....++..|+|||.+.+.      .++.++|||||||++|+|++|          ..||.....
T Consensus       164 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~~l~~g----------~~pf~~~~~  222 (353)
T cd07850         164 LARTAGTSFM-----MTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIRG----------TVLFPGTDH  222 (353)
T ss_pred             cceeCCCCCC-----CCCCcccccccCHHHHhCC------CCCCchhhHhHHHHHHHHHHC----------CCCCCCCCH
Confidence            9976543211     1234678899999999776      667899999999999999999          444432210


Q ss_pred             CCCChHHHHhhhh-------------------hcCCCCC---------CCCCC-------CCchhHHHHHHHHHHHhcCC
Q psy14889        367 MDPSFDDMRKVIC-------------------IDQQRPV---------LPNRW-------VSDSTLNAMTKVMKECWHQN  411 (443)
Q Consensus       367 ~~~~~~~~~~~~~-------------------~~~~~~~---------~~~~~-------~~~~~~~~l~~li~~cl~~d  411 (443)
                          .........                   ....++.         .+...       .....++.+.+++.+||+.|
T Consensus       223 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  298 (353)
T cd07850         223 ----IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID  298 (353)
T ss_pred             ----HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC
Confidence                000000000                   0000000         00000       01234567899999999999


Q ss_pred             cCCCCcHHHHHHH
Q psy14889        412 ANVRLSALRVKKT  424 (443)
Q Consensus       412 P~~Rps~~evl~~  424 (443)
                      |++|||+.|+++.
T Consensus       299 P~~R~t~~eiL~~  311 (353)
T cd07850         299 PEKRISVDDALQH  311 (353)
T ss_pred             hhhCcCHHHHhcC
Confidence            9999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=9.5e-37  Score=298.00  Aligned_cols=264  Identities=25%  Similarity=0.359  Sum_probs=194.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhc-cCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.++|++.+.||+|+||.||+|..  +++.+|+|++....   ........|+..+..+ +||||+++++++.....  .
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~--~   82 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND--K   82 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC--c
Confidence            457899999999999999999987  57899999875421   1112223466666668 99999999998765432  4


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .+++||||++ ++|..++....+++..+..++.||+.||.|||+.        +|+||||||+||+++.++.+||+|||+
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~i~H~dl~p~nill~~~~~~kl~d~g~  153 (337)
T cd07852          83 DIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG--------NVIHRDLKPSNILLNSDCRVKLADFGL  153 (337)
T ss_pred             eEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCcEEEeeccc
Confidence            5799999998 5999999877889999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcC-CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        288 AVSYSQLSNKM-DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       288 a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +..+....... ........||..|+|||.+.+..     .++.++||||||+++|||++|          ..||.....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~sDi~slG~~l~el~tg----------~~pf~~~~~  218 (337)
T cd07852         154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGST-----RYTKGVDMWSVGCILGEMLLG----------KPLFPGTST  218 (337)
T ss_pred             hhccccccccccCcchhcccccccccCceeeeccc-----cccccchHHHHHHHHHHHHhC----------CCCCCCCCh
Confidence            97665432211 01123346889999999886531     455789999999999999999          445533211


Q ss_pred             CCCChHHHHhhhhhc-------------------------CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        367 MDPSFDDMRKVICID-------------------------QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                          .+.........                         ....... ... ...+.++.+++.+||+.||++|||+.++
T Consensus       219 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~li~~~l~~~P~~Rps~~~i  292 (337)
T cd07852         219 ----LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLD-ELL-PKASDDALDLLKKLLVFNPNKRLTAEEA  292 (337)
T ss_pred             ----HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchh-hhc-cCCCHHHHHHHHHhccCCcccccCHHHH
Confidence                01111100000                         0000000 011 1256789999999999999999999999


Q ss_pred             HHH--HHHHh
Q psy14889        422 KKT--LIKLA  429 (443)
Q Consensus       422 l~~--L~~l~  429 (443)
                      ++.  +..+.
T Consensus       293 l~~~~~~~~~  302 (337)
T cd07852         293 LEHPYVAQFH  302 (337)
T ss_pred             hhChhhhhhc
Confidence            975  55543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.2e-36  Score=289.80  Aligned_cols=252  Identities=22%  Similarity=0.295  Sum_probs=187.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||+|.+  +|+.||+|++.....   .......|+..+..++||||+++++++...    ..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~~   76 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG----SGFVL   76 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC----CeeEE
Confidence            478889999999999999997  588999998865432   122334566666668999999999998775    45799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |+||+ +++|.+++..  ..+++.++..++.||+.||.|||+.        +++|+||||+||+++.++.++|+|||++.
T Consensus        77 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~ni~~~~~~~~~l~dfg~~~  147 (286)
T cd07832          77 VMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN--------GIMHRDLKPANLLISADGVLKIADFGLAR  147 (286)
T ss_pred             Eeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence            99999 9999999854  5689999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   ......|+..|+|||.+.+..     .++.++||||||+++|||++|.          .||....    
T Consensus       148 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~tg~----------~~~~~~~----  205 (286)
T cd07832         148 LFSEEEPR---LYSHQVATRWYRAPELLYGAR-----KYDPGVDLWAVGCIFAELLNGS----------PLFPGEN----  205 (286)
T ss_pred             cccCCCCC---ccccccCcccccCceeeeccc-----cCCchhHHHHHHHHHHHHHcCC----------cCcCCCC----
Confidence            66543211   122346889999999986542     3467999999999999999993          3443211    


Q ss_pred             ChHHHHhhhhhcC----------------CCCCCCCC----C--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQ----------------QRPVLPNR----W--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~----------------~~~~~~~~----~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...........-.                .....+..    +  .....+..+.+++++||+.||++|||++++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         206 DIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            0111111100000                00000000    0  00124578999999999999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=3.5e-36  Score=291.50  Aligned_cols=253  Identities=26%  Similarity=0.390  Sum_probs=191.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ...+.|...+.||+|+||.||+++.  ++..||+|.+.......    .....|+..+..++|||++++++++....   
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---   98 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH---   98 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC---
Confidence            3345688899999999999999987  57899999886432221    12234566666699999999999987763   


Q ss_pred             cEEEeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..++||||+. |+|.+.+.  ...+++.++..++.|++.||.|||+.        +++||||+|+||+++.++.+||+|
T Consensus        99 -~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dL~p~Nil~~~~~~~kl~d  168 (317)
T cd06635          99 -TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--------NMIHRDIKAGNILLTEPGQVKLAD  168 (317)
T ss_pred             -eEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCcccEEECCCCCEEEec
Confidence             4799999997 58887774  45689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.....        .....|+..|+|||.+.....   ..++.++|||||||++|||++|          ..||...
T Consensus       169 fg~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~---~~~~~~~Dv~slGvil~el~~g----------~~p~~~~  227 (317)
T cd06635         169 FGSASIASP--------ANSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAER----------KPPLFNM  227 (317)
T ss_pred             CCCccccCC--------cccccCCccccChhhhhcCCC---CCCCccccHHHHHHHHHHHHhC----------CCCCCCc
Confidence            999865432        123468889999999753211   1456899999999999999999          6666543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      .    .......... . ..+..+    ....+..+.+++.+||+.+|.+||++.++++.+-.+.
T Consensus       228 ~----~~~~~~~~~~-~-~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         228 N----AMSALYHIAQ-N-ESPTLQ----SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             c----HHHHHHHHHh-c-cCCCCC----CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            1    1122222221 1 111111    1335667999999999999999999999998654433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0604|consensus

Probab=100.00  E-value=7.5e-38  Score=280.75  Aligned_cols=254  Identities=22%  Similarity=0.341  Sum_probs=203.8

Q ss_pred             hhhcccccc-ceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        133 TLAKQISLS-ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       133 ~~~~~~~~~-~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .++++|++. ++||-|-.|.|..+..  +++.+|+|++..  ....++|.|+.-+. -.|||||++++++.........+
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~-s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMA-SGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhh-cCCCceEEeehhhhhhccCceee
Confidence            345667655 5899999999998877  689999998753  34456677776665 48999999999998776666779


Q ss_pred             EeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---CcEEEE
Q psy14889        210 WLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIA  283 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~~kl~  283 (443)
                      .+|||+|+||.|.+.+++   ..+++.++..|+.||+.|+.|||+.        +|.||||||+|+|....   ..+||+
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~--------nIAHRDlKpENLLyt~t~~na~lKLt  206 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM--------NIAHRDLKPENLLYTTTSPNAPLKLT  206 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc--------chhhccCChhheeeecCCCCcceEec
Confidence            999999999999999964   4599999999999999999999999        99999999999999754   478999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+|+.-....     ...+.+-|+.|.|||++...      +|....|+||+||++|-|+.|          ..||..
T Consensus       207 DfGFAK~t~~~~-----~L~TPc~TPyYvaPevlg~e------KydkscdmwSlgVimYIlLCG----------yPPFYS  265 (400)
T KOG0604|consen  207 DFGFAKETQEPG-----DLMTPCFTPYYVAPEVLGPE------KYDKSCDMWSLGVIMYILLCG----------YPPFYS  265 (400)
T ss_pred             ccccccccCCCc-----cccCCcccccccCHHHhCch------hcCCCCCccchhHHHHHhhcC----------CCcccc
Confidence            999997654321     12345789999999999876      677889999999999999999          677777


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCC-CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPN-RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .... .....++..+...+.  .+|+ +|  +..++..+++|+.+|..+|.+|.|+.++++
T Consensus       266 ~hg~-aispgMk~rI~~gqy--~FP~pEW--s~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  266 NHGL-AISPGMKRRIRTGQY--EFPEPEW--SCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             cCCc-cCChhHHhHhhccCc--cCCChhH--hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            6542 233455555544333  3332 24  447788999999999999999999999876

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-36  Score=286.17  Aligned_cols=239  Identities=24%  Similarity=0.308  Sum_probs=181.1

Q ss_pred             ceeeeecCeEEEEEEE--CCceeEEEEeeccCccc------hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS------WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~------~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.||+|+||.||+|..  +|+.||+|++.......      ...|.++. ....+|+||+++++++...    ..+++|+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~i~~~~~~~~~~----~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIM-MIQGESPYVAKLYYSFQSK----DYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHH-hhcCCCCCeeeeeeeEEcC----CeEEEEE
Confidence            5689999999999988  58899999885432111      11122222 2236899999999998765    4589999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++++|.++++. ..+++.++..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||+++...
T Consensus        77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR--------GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEECCCCcEEEeecccceecc
Confidence            99999999999965 5689999999999999999999998        99999999999999999999999999986543


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .        .....|+..|+|||.+.+.      .++.++||||||+++|||++|          ..||....     ..
T Consensus       149 ~--------~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~-----~~  199 (260)
T cd05611         149 E--------NKKFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFG----------YPPFHAET-----PD  199 (260)
T ss_pred             c--------cccCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHC----------CCCCCCCC-----HH
Confidence            2        1234578899999998876      456899999999999999999          66765431     12


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      .....+...  ....+.. ....++..+.+++.+||+.||++||++.++.+.|
T Consensus       200 ~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         200 AVFDNILSR--RINWPEE-VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHHHHHhc--ccCCCCc-ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            222222111  1111111 1123567899999999999999999876554433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.4e-36  Score=289.27  Aligned_cols=251  Identities=24%  Similarity=0.340  Sum_probs=186.1

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +|+..+.||+|++|.||+|..  +|+.||||.+......  ......|+..+..++||||+++++++.+.+    ..++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv   76 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN----KLMLV   76 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC----cEEEE
Confidence            478899999999999999998  5889999988654322  122234566666699999999999988763    47999


Q ss_pred             ecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        213 THYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |||+++ +|.+++..    ..+++..+..++.|++.||.|||+.        +++|+||||+||++++++.+||+|||++
T Consensus        77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~h~dl~p~ni~~~~~~~~~l~d~g~~  147 (284)
T cd07836          77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN--------RVLHRDLKPQNLLINKRGELKLADFGLA  147 (284)
T ss_pred             EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCHHHEEECCCCcEEEeecchh
Confidence            999985 89888754    3589999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.+...  
T Consensus       148 ~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~-----~~~~~~Dv~slG~~l~~l~~g----------~~~~~~~~~--  206 (284)
T cd07836         148 RAFGIPVNT----FSNEVVTLWYRAPDVLLGSR-----TYSTSIDIWSVGCIMAEMITG----------RPLFPGTNN--  206 (284)
T ss_pred             hhhcCCccc----cccccccccccChHHhcCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCCc--
Confidence            755432211    12345788999999986542     345799999999999999999          555543211  


Q ss_pred             CChHHHHhhhh---------------hcCCCCCCCCCC------CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVIC---------------IDQQRPVLPNRW------VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~---------------~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        .+.......               ........+...      .....+..+.+++.+||+.||.+||++.++++
T Consensus       207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         207 --EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             --HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence              111111110               000001111000      00123567899999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-37  Score=295.12  Aligned_cols=198  Identities=27%  Similarity=0.416  Sum_probs=156.4

Q ss_pred             cccccceeeeecCeEEEEEEE----CCceeEEEEeeccC---c-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW----HGENVAVKIFFSRD---E-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~---~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|++.+.||+|+||.||+|..    ++..||+|.+....   . .......|+..+..++||||+++++++.+...  ..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~   78 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD--KS   78 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC--ce
Confidence            477889999999999999998    46899999886532   1 11222345555666999999999999887633  46


Q ss_pred             EEeeecccCcccHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC----CC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NG  278 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~----~~  278 (443)
                      +++||||+++ +|.+++..      ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.    ++
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~h~dlkp~Nil~~~~~~~~~  149 (316)
T cd07842          79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN--------WVLHRDLKPANILVMGEGPERG  149 (316)
T ss_pred             EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC--------CEeeCCCCHHHEEEcCCCCccc
Confidence            8999999985 77766632      2688999999999999999999998        9999999999999999    89


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      .+||+|||++......... ........+|..|+|||.+.+..     .++.++||||||+++|||++|++++
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~~l~~l~~~~~~~  216 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGAR-----HYTKAIDIWAIGCIFAELLTLEPIF  216 (316)
T ss_pred             eEEECCCccccccCCCccc-ccccCCccccccccCHHHHhCCC-----CCCcHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999766543221 11223456889999999886542     3567999999999999999995443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.9e-36  Score=284.98  Aligned_cols=239  Identities=21%  Similarity=0.272  Sum_probs=185.3

Q ss_pred             eeeecCeEEEEEEEC--CceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||.|+||.||++...  ++.||+|++......    ......|+..+..++||||+++++.+.+.    ..+++++||++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK----KYIYMLMEYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC----CccEEEEecCC
Confidence            699999999999985  899999988653321    12223455555668999999999988765    34799999999


Q ss_pred             cccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        218 FGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       218 ~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      +++|.+++.+ ..+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||++........
T Consensus        77 ~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~--------~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~  148 (262)
T cd05572          77 GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNR--------GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK  148 (262)
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc
Confidence            9999999975 4689999999999999999999998        999999999999999999999999999976654321


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                           .....|+..|+|||.+.+.      .++.++|+||||+++|||++|          ..||.....  ........
T Consensus       149 -----~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~~--~~~~~~~~  205 (262)
T cd05572         149 -----TWTFCGTPEYVAPEIILNK------GYDFSVDYWSLGILLYELLTG----------RPPFGEDDE--DPMEIYND  205 (262)
T ss_pred             -----cccccCCcCccChhHhcCC------CCCChhhhhhhHHHHHHHHhC----------CCCcCCCCC--CHHHHHHH
Confidence                 1234678899999998765      567899999999999999999          667765421  11122222


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                       +......+..|.     ..+.++.+++.+||+.||++||+     +.|+++
T Consensus       206 -~~~~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         206 -ILKGNGKLEFPN-----YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             -HhccCCCCCCCc-----ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence             221123333332     23568999999999999999999     666665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.2e-36  Score=291.32  Aligned_cols=255  Identities=22%  Similarity=0.303  Sum_probs=184.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhc-cCCCceeeeeeccccCC-cccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLL-RHENILGYIGSDMTSRN-SCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~-~~~~  208 (443)
                      ++|++.+.||+|+||.||+|.+  +++.||+|.+......   ......|+..+..+ +||||+++++++..... ....
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3688899999999999999997  5889999987543221   12223455555557 46999999998876543 2234


Q ss_pred             EEeeecccCcccHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEE
Q psy14889        209 LWLVTHYHSFGSLYDHLNR------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCV  281 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~k  281 (443)
                      .++||||+++ +|.+++..      ..+++..+..++.||+.||.|||+.        +|+||||||+||+++. ++.+|
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~i~H~dl~~~nil~~~~~~~~k  151 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH--------GVMHRDLKPQNLLVDKQKGLLK  151 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCChHHEEEecCCCeEE
Confidence            7999999985 89888742      3579999999999999999999998        9999999999999998 88999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+++.+......    .....+++.|+|||.+.+..     .++.++||||||+++|||++|          ..||
T Consensus       152 l~dfg~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~~g----------~~~~  212 (295)
T cd07837         152 IADLGLGRAFSIPVKS----YTHEIVTLWYRAPEVLLGST-----HYSTPVDIWSVGCIFAEMSRK----------QPLF  212 (295)
T ss_pred             EeecccceecCCCccc----cCCcccccCCCChHHhhCCC-----CCCchHHHHHHHHHHHHHHcC----------CCCC
Confidence            9999998765432211    12235678899999886531     456899999999999999999          4555


Q ss_pred             CCCCCCCCChHHHHhhhhhc---------------------CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICID---------------------QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      ....    ............                     ...+..... .....+.++.++|.+||+.||.+|||+.|
T Consensus       213 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~R~~~~e  287 (295)
T cd07837         213 PGDS----ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSR-AVPDLSPEGLDLLQKMLRYDPAKRISAKA  287 (295)
T ss_pred             CCCC----HHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHH-hccccCHHHHHHHHHHccCChhhcCCHHH
Confidence            4321    111111111000                     000000000 01235677999999999999999999999


Q ss_pred             HHH
Q psy14889        421 VKK  423 (443)
Q Consensus       421 vl~  423 (443)
                      ++.
T Consensus       288 il~  290 (295)
T cd07837         288 ALT  290 (295)
T ss_pred             Hhc
Confidence            875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=9.5e-37  Score=294.85  Aligned_cols=259  Identities=21%  Similarity=0.338  Sum_probs=183.8

Q ss_pred             cccceeeeecCeEEEEEEECCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        139 SLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      .+.+.+|.|+++.||++..+++.||||++....   ......+.|+..+..++|+||+++++++...    ...+++|||
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~----~~~~~~~e~   80 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD----SELYVVSPL   80 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC----CeEEEEEec
Confidence            345556667777777777789999999986542   1222335666667779999999999998766    357999999


Q ss_pred             cCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++|+|.+++.+   ..+++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+||+|||.+....
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~--------~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~  152 (314)
T cd08216          81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK--------GFIHRSVKASHILLSGDGKVVLSGLRYSVSMI  152 (314)
T ss_pred             cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCcceEEEecCCceEEecCccceeec
Confidence            999999999864   4688999999999999999999998        99999999999999999999999999986554


Q ss_pred             ccCCc---CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        293 QLSNK---MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       293 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .....   .........++..|+|||++.....    .++.++|||||||++|||++|          ..||........
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----~~~~~~Diws~G~il~el~~g----------~~pf~~~~~~~~  218 (314)
T cd08216         153 KHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQ----GYNEKSDIYSVGITACELANG----------HVPFKDMPATQM  218 (314)
T ss_pred             cccccccccccccccccccccccCHHHhcCCCC----CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCHHHH
Confidence            32211   1111233457788999999875421    466899999999999999999          455543211000


Q ss_pred             ChHHHHhhh---------hhc----------CCCC---CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVI---------CID----------QQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~---------~~~----------~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+......         ...          ...+   ...........+.++.+++.+||+.||++|||++++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         219 LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            000000000         000          0000   00000011234567899999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=9.4e-37  Score=298.03  Aligned_cols=277  Identities=20%  Similarity=0.209  Sum_probs=192.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCC-cccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRN-SCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~~~  208 (443)
                      .++|.+.+.||+|+||.||+|..  +++.||||.+....   ........|+..+..++|+||+++++++..... ....
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            46899999999999999999987  58999999875431   112223345666666899999999998764421 2235


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .++|+||+. ++|.+++.. ..+++..+..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||+
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~i~H~dlkp~Nil~~~~~~~kL~Dfg~  154 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA--------NVLHRDLKPSNLLLNANCDLKICDFGL  154 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence            799999997 689888854 6799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc----------c
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE----------Y  357 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~----------~  357 (443)
                      ++........    .....++..|+|||.+....     .++.++|||||||++|||++|+.++.....          .
T Consensus       155 ~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  225 (337)
T cd07858         155 ARTTSEKGDF----MTEYVVTRWYRAPELLLNCS-----EYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELL  225 (337)
T ss_pred             ccccCCCccc----ccccccccCccChHHHhcCC-----CCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence            9765432211    12346788999999886531     456799999999999999999544321000          0


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH--HHHHhh
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT--LIKLAC  430 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~l~~  430 (443)
                      ..|...... ........+.+......+..+.......++.++.+++++||+.||++|||+.++++.  +..+..
T Consensus       226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         226 GSPSEEDLG-FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             CCCChHHhh-hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence            000000000 000000011110000001000000112356789999999999999999999999986  665543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-37  Score=290.26  Aligned_cols=250  Identities=24%  Similarity=0.323  Sum_probs=184.5

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|++|.||+|..  +|..||+|++.......   .....|+..+..++||||+++++++.+.    ...+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~----~~~~iv   76 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE----NKLYLV   76 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC----CeEEEE
Confidence            56788999999999999987  68999999886443211   2233456666669999999999998766    457999


Q ss_pred             ecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||++ ++|.+++...   .+++..++.++.|++.||+|||+.        +++|+||+|+||+++.++.++|+|||++.
T Consensus        77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~--------~~~H~dl~p~nil~~~~~~~~l~df~~~~  147 (283)
T cd07835          77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH--------RVLHRDLKPQNLLIDREGALKLADFGLAR  147 (283)
T ss_pred             EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence            99996 6999998653   589999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||++.+..     .++.++||||||+++|||++|          ..||....    
T Consensus       148 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~~g----------~~pf~~~~----  204 (283)
T cd07835         148 AFGVPVRT----YTHEVVTLWYRAPEILLGSR-----QYSTPVDIWSIGCIFAEMVNR----------RPLFPGDS----  204 (283)
T ss_pred             ccCCCccc----cCccccccCCCCCceeecCc-----ccCcHHHHHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            55432111    12235688999999886541     345789999999999999999          55554321    


Q ss_pred             ChHHHHhhhhhc---------------CCCCCCC------CCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICID---------------QQRPVLP------NRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~---------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......+.....               ......+      ..-.....+..+.+++.+||+.||++|||++|+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         205 EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            111111111000               0000000      00001234467899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=7.4e-37  Score=299.35  Aligned_cols=260  Identities=23%  Similarity=0.243  Sum_probs=188.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcc-----
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSC-----  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~-----  206 (443)
                      ..+|.+.+.||+|+||.||+|..  +|+.||+|.+....... .....|+..+..++||||+++++++.......     
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            36899999999999999999987  58899999886544322 22345566666799999999998876543221     


Q ss_pred             -----cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcE
Q psy14889        207 -----TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTC  280 (443)
Q Consensus       207 -----~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~  280 (443)
                           ...++||||++ ++|.+++....+++..+..++.||+.||.|||+.        +|+||||||+||+++. ++.+
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------givH~dikp~Nili~~~~~~~  154 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA--------NVLHRDLKPANVFINTEDLVL  154 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEEcCCCceE
Confidence                 24789999997 5999999888899999999999999999999998        9999999999999974 5578


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||+++.+....... .......|+..|+|||.+....     .++.++|||||||++|||++|          ..|
T Consensus       155 kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwSlGvil~el~~g----------~~p  218 (342)
T cd07854         155 KIGDFGLARIVDPHYSHK-GYLSEGLVTKWYRSPRLLLSPN-----NYTKAIDMWAAGCIFAEMLTG----------KPL  218 (342)
T ss_pred             EECCcccceecCCccccc-cccccccccccccCHHHHhCcc-----ccCchhhHHHHHHHHHHHHhC----------CCC
Confidence            999999997654321111 1112235788999999875431     456799999999999999999          555


Q ss_pred             CCCCCCCCCChHHHHhhh----------------------hhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        361 YHDLVPMDPSFDDMRKVI----------------------CIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      |....+    ........                      ......+..+........+.++.+++.+||+.||++|||+
T Consensus       219 f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  294 (342)
T cd07854         219 FAGAHE----LEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA  294 (342)
T ss_pred             CCCCCH----HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH
Confidence            543211    01111000                      0000011111000011245678999999999999999999


Q ss_pred             HHHHH
Q psy14889        419 LRVKK  423 (443)
Q Consensus       419 ~evl~  423 (443)
                      .++++
T Consensus       295 ~ell~  299 (342)
T cd07854         295 EEALM  299 (342)
T ss_pred             HHHhC
Confidence            99984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.8e-36  Score=290.11  Aligned_cols=245  Identities=26%  Similarity=0.392  Sum_probs=188.8

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      |.....||+|+||.||++..  +++.||||.+...... ......|+..+..++|+||+++++.+...    ...++|||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e   97 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DELWVVME   97 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC----CEEEEEEe
Confidence            33456799999999999987  6889999987543221 22233456666669999999999998776    45799999


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      |+++++|.+++....+++..+..++.|++.||+|||+.        +++|+||+|+||+++.++.++|+|||++......
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~  169 (292)
T cd06657          98 FLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ--------GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  169 (292)
T ss_pred             cCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence            99999999999888899999999999999999999998        9999999999999999999999999998655432


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ...    .....|+..|+|||.+.+.      .++.++|+||||+++|||++|          ..||....    . ...
T Consensus       170 ~~~----~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slGvil~el~tg----------~~p~~~~~----~-~~~  224 (292)
T cd06657         170 VPR----RKSLVGTPYWMAPELISRL------PYGPEVDIWSLGIMVIEMVDG----------EPPYFNEP----P-LKA  224 (292)
T ss_pred             ccc----ccccccCccccCHHHhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC----H-HHH
Confidence            211    1234688999999998765      566899999999999999999          66665421    1 111


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+.. ...+.+..   ....+..+.+++.+||+.||.+||++.++++
T Consensus       225 ~~~~~~-~~~~~~~~---~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         225 MKMIRD-NLPPKLKN---LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHh-hCCcccCC---cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            111111 11111111   1234567899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.5e-36  Score=282.60  Aligned_cols=242  Identities=24%  Similarity=0.422  Sum_probs=192.7

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++..  +++.+|+|.+......   ......|+..+..++|+||+++++++...    ...++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~   76 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG----NKLCI   76 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC----CEEEE
Confidence            478889999999999999987  5789999988653221   12223566666679999999999998776    46899


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      |+||+++++|.+++.+     ..+++..+..++.|++.||+|||+.        +++|+||+|.||++++++.+||+|||
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~--------~i~h~~l~~~ni~~~~~~~~kl~d~g  148 (256)
T cd08530          77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ--------KILHRDLKSANILLVANDLVKIGDLG  148 (256)
T ss_pred             EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCCcceEEEecCCcEEEeecc
Confidence            9999999999999865     5689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......      .....++..|+|||.+.+.      .++.++|+||||+++|||++|          ..||...  
T Consensus       149 ~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g----------~~p~~~~--  204 (256)
T cd08530         149 ISKVLKKNM------AKTQIGTPHYMAPEVWKGR------PYSYKSDIWSLGCLLYEMATF----------APPFEAR--  204 (256)
T ss_pred             chhhhccCC------cccccCCccccCHHHHCCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC--
Confidence            997765431      1224578899999998765      566799999999999999999          6676543  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ........+. ....+..+     ...+.++.+++.+||+.+|++|||+.++++
T Consensus       205 ---~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         205 ---SMQDLRYKVQ-RGKYPPIP-----PIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             ---CHHHHHHHHh-cCCCCCCc-----hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               2222322222 12222222     245678999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG4250|consensus

Probab=100.00  E-value=2.3e-37  Score=306.36  Aligned_cols=265  Identities=27%  Similarity=0.371  Sum_probs=193.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc----CccchHHHHHHHHHHhccCCCceeeeeeccccCC--ccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR----DEASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~----~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~  207 (443)
                      ..+...+.||+|+||.||+|+.  +|+.||||.++..    ..+.+.+|  +..+++++|+|||+++++-.+...  ...
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~E--ieilkKLnh~NIVk~f~iee~~~~~~~~~   90 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCRE--IEILKKLNHPNIVKLFDIEETKFLGLVTR   90 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHH--HHHHHHcCchhhhhhcccCCccccCcccc
Confidence            3456678999999999999997  6999999988652    23334444  455555999999999998665541  013


Q ss_pred             EEEeeecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--CC--c
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NG--T  279 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--~~--~  279 (443)
                      ...+|||||.+|||+..|++    .+|++.+.+.++.+++.||.|||++        +|+||||||.||++-.  +|  .
T Consensus        91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn--------~IvHRDlKP~NIvl~~Gedgq~I  162 (732)
T KOG4250|consen   91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN--------GIVHRDLKPGNIVLQIGEDGQSI  162 (732)
T ss_pred             cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCcEEEeecCCCceE
Confidence            46899999999999999975    4799999999999999999999988        9999999999999843  23  5


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      .||+|||.|+.+.+.+     .....+||..|.+||++..+.     .|+..+|.|||||++||.+||..          
T Consensus       163 yKLtDfG~Arel~d~s-----~~~S~vGT~~YLhPel~E~q~-----~y~~tVDLWS~GvtlY~caTG~l----------  222 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNS-----LFTSLVGTEEYLHPELYERQK-----KYTATVDLWSFGVTLYECATGEL----------  222 (732)
T ss_pred             EeeecccccccCCCCC-----eeeeecCchhhcChHHHhhcc-----CcCceeehhhhhhHHHHHhccCC----------
Confidence            6999999999888755     235679999999999998521     56678999999999999999944          


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcC----------CC------CCCCC-CCCCchhHHHHHHHHHHHhcCCcCCCC--cHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQ----------QR------PVLPN-RWVSDSTLNAMTKVMKECWHQNANVRL--SALR  420 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~----------~~------~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rp--s~~e  420 (443)
                      ||..........+.+........          ..      ..+|. ..........+...+..+|..||.+|-  .+.+
T Consensus       223 PF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~  302 (732)
T KOG4250|consen  223 PFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDR  302 (732)
T ss_pred             CCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcch
Confidence            44432222212222222211100          00      01111 011122345577788899999999999  7777


Q ss_pred             HHHHHHHHhh
Q psy14889        421 VKKTLIKLAC  430 (443)
Q Consensus       421 vl~~L~~l~~  430 (443)
                      ....+..+.+
T Consensus       303 ~Fa~~~dIL~  312 (732)
T KOG4250|consen  303 FFAEVDDILN  312 (732)
T ss_pred             HHHHHHHHHh
Confidence            7777776654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=4.5e-36  Score=279.56  Aligned_cols=245  Identities=33%  Similarity=0.540  Sum_probs=192.3

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +|+..+.||+|++|.||++..  +++.+++|++..... .......|+..+..++|+||+++++.+...    ...++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~l~~   76 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK----DELWIVM   76 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----CeEEEEE
Confidence            367789999999999999998  488999998865543 223334566666668999999999998776    3579999


Q ss_pred             cccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+++++|.+++...  .+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.++|+|||.+...
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--------~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~  148 (253)
T cd05122          77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN--------GIIHRDIKAANILLTSDGEVKLIDFGLSAQL  148 (253)
T ss_pred             ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC--------CEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence            999999999998654  799999999999999999999998        9999999999999999999999999998766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....     .....|+..|+|||.+.+.      .++.++||||||+++|+|++|          ..||....    ..
T Consensus       149 ~~~~~-----~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~----~~  203 (253)
T cd05122         149 SDTKA-----RNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEG----------KPPYSELP----PM  203 (253)
T ss_pred             ccccc-----ccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhC----------CCCCCCCc----hH
Confidence            54321     1334688899999998766      466899999999999999999          56665431    11


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ....... . ...+..+.   ....+..+.+++.+||+.||++|||+.++++
T Consensus       204 ~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         204 KALFKIA-T-NGPPGLRN---PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHH-h-cCCCCcCc---ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111111 1 12222221   1113567999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0986|consensus

Probab=100.00  E-value=9.4e-38  Score=293.96  Aligned_cols=241  Identities=25%  Similarity=0.332  Sum_probs=194.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc------CccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~------~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.|..-++||+|+||.||-++.  +|+.+|.|.+.++      .+.....|++|+..  ++.+.||.+--.|.+.+    
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k--V~s~FiVslaYAfeTkd----  258 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK--VSSPFIVSLAYAFETKD----  258 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH--hccCcEEEEeeeecCCC----
Confidence            5688889999999999998765  7999999977432      22333445666555  88999999887777774    


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      .+++|+..|.+|||.-+|.+   ..+++..+..++.+|+.||++||..        +||.|||||+|||+|+.|+++|+|
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~--------~iVYRDLKPeNILLDd~GhvRISD  330 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR--------RIVYRDLKPENILLDDHGHVRISD  330 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc--------ceeeccCChhheeeccCCCeEeec
Confidence            48999999999999988864   4799999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      +|+|..+......     ...+||.+|||||++...      .|+...|.|||||++|||+.|          +.||...
T Consensus       331 LGLAvei~~g~~~-----~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G----------~sPFr~~  389 (591)
T KOG0986|consen  331 LGLAVEIPEGKPI-----RGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAG----------HSPFRQR  389 (591)
T ss_pred             cceEEecCCCCcc-----ccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcc----------cCchhhh
Confidence            9999888764332     455899999999999988      677899999999999999999          7888764


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      .. ....+++.+.+..+..  .     .++..++++++|.+..|..||++|....
T Consensus       390 Ke-Kvk~eEvdrr~~~~~~--e-----y~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  390 KE-KVKREEVDRRTLEDPE--E-----YSDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             hh-hhhHHHHHHHHhcchh--h-----cccccCHHHHHHHHHHHccCHHHhccCC
Confidence            22 2233344443322211  1     2355778899999999999999998544

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-36  Score=289.20  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=187.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|.+......   ......|+..+..++|+||+++++++...    ...+
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~   76 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK----GRLY   76 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC----CEEE
Confidence            3688999999999999999988  5789999987543221   22334566666669999999999998775    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||++++.+..+..+ ..+++.++..++.||+.||.|||+.        +++|+||+|+||++++++.+||+|||++.
T Consensus        77 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~dl~~~ni~~~~~~~~kl~d~g~~~  148 (288)
T cd07833          77 LVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH--------NIIHRDIKPENILVSESGVLKLCDFGFAR  148 (288)
T ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence            99999998777766643 5699999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   ......++..|+|||++.+..     .++.++||||||+++|||++|++          ||....    
T Consensus       149 ~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~-----~~~~~~Dv~slG~~l~~l~~g~~----------~~~~~~----  206 (288)
T cd07833         149 ALRARPAS---PLTDYVATRWYRAPELLVGDT-----NYGKPVDVWAIGCIMAELLDGEP----------LFPGDS----  206 (288)
T ss_pred             ccCCCccc---cccCcccccCCcCCchhcCCC-----CcCchhhHHHHHHHHHHHHhCCC----------CCCCCC----
Confidence            76543321   123346788999999987642     45579999999999999999944          443211    


Q ss_pred             ChHHHHhhhh--------------hcC-CCC-CCCC--------CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVIC--------------IDQ-QRP-VLPN--------RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~--------------~~~-~~~-~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.......              ... ... ..++        ......++.++.+++++||+.||++|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         207 DIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            0011110000              000 000 0000        0111224678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3e-36  Score=290.84  Aligned_cols=254  Identities=27%  Similarity=0.340  Sum_probs=187.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||+|.+......   ......|+..+..++|+||+++++++.....  ..++
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~~   84 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL--DSIF   84 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC--CeEE
Confidence            6899999999999999999998  5899999988643221   1122346666666999999999999865432  3579


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+.+ +|.+++..  ..+++.++..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||++
T Consensus        85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~nil~~~~~~~kL~dfg~~  155 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN--------FIIHRDLKVSNLLLTDKGCLKIADFGLA  155 (309)
T ss_pred             EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECCCCCEEECcccee
Confidence            99999974 88888764  5689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||....   
T Consensus       156 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwslG~il~el~~g----------~~~f~~~~---  213 (309)
T cd07845         156 RTYGLPAKP----MTPKVVTLWYRAPELLLGCT-----TYTTAIDMWAVGCILAELLAH----------KPLLPGKS---  213 (309)
T ss_pred             eecCCccCC----CCcccccccccChhhhcCCC-----CcCchHHHHHHHHHHHHHHhC----------CCCCCCCC---
Confidence            766543211    12234578899999987542     456899999999999999999          44554321   


Q ss_pred             CChHHHHhhhhhcC----------------CCCCCCCC-C-----CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQ----------------QRPVLPNR-W-----VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~----------------~~~~~~~~-~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ..+..........                .....+.. +     .....+..+.++|.+||+.||++|||+++++.
T Consensus       214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         214 -EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             -HHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             1111111111000                00000000 0     00113567889999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.1e-36  Score=287.29  Aligned_cols=239  Identities=25%  Similarity=0.316  Sum_probs=181.9

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||+||++..  +|+.||+|.+.....    .......|+..+..++||||+++++.+...    ...++||||++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK----DDLCLVMTLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC----CeEEEEEecCC
Confidence            68999999999987  588999998854321    111223455556669999999999988765    45799999999


Q ss_pred             cccHHHHhcc-c--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        218 FGSLYDHLNR-T--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       218 ~gsL~~~l~~-~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      +++|.+++.+ .  .+++..+..++.|++.||.|||+.        +++|+||+|+||++++++.+||+|||++......
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~  148 (277)
T cd05577          77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR--------RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG  148 (277)
T ss_pred             CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence            9999999854 2  589999999999999999999998        9999999999999999999999999998765431


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ..     .....++..|+|||.+.+.      .++.++||||||+++|||++|          ..||....... ....+
T Consensus       149 ~~-----~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~~~~-~~~~~  206 (277)
T cd05577         149 KK-----IKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAG----------RSPFRQRKEKV-EKEEL  206 (277)
T ss_pred             Cc-----cccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhC----------CCCCCCCcccc-cHHHH
Confidence            11     1234678899999998766      566899999999999999999          66765432111 11222


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .....  ......+     ...+..+.+++.+||+.||++||     ++.++++
T Consensus       207 ~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         207 KRRTL--EMAVEYP-----DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             Hhccc--cccccCC-----ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            22111  1111222     23466799999999999999999     6666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=4.1e-36  Score=285.52  Aligned_cols=239  Identities=26%  Similarity=0.378  Sum_probs=181.4

Q ss_pred             eeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHH-HHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        143 CIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .||+|+||.||++..  +++.||+|.+......      ....|..+. ......||||+.+++++...    ..+++||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~v~   76 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP----DKLSFIL   76 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC----CEEEEEE
Confidence            489999999999987  5789999987643211      112222222 22335899999999988766    3579999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++|+|.+++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++..+.
T Consensus        77 e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~--------~i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          77 DLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR--------FVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            99999999998854 5689999999999999999999998        99999999999999999999999999987554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ...      .....|+..|+|||.+.++.     .++.++||||||+++|||++|          ..||.+....  ...
T Consensus       149 ~~~------~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~s~G~~l~~l~~g----------~~p~~~~~~~--~~~  205 (278)
T cd05606         149 KKK------PHASVGTHGYMAPEVLQKGV-----AYDSSADWFSLGCMLFKLLRG----------HSPFRQHKTK--DKH  205 (278)
T ss_pred             ccC------CcCcCCCcCCcCcHHhcCCC-----CCCcccchHhHHHHHHHHHhC----------CCCCCCCCcc--chH
Confidence            221      12346899999999987541     456789999999999999999          6676553211  111


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      ......  ....+.++     ...+..+.+++.+||..||.+||     ++.++++
T Consensus       206 ~~~~~~--~~~~~~~~-----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         206 EIDRMT--LTMAVELP-----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHh--hccCCCCC-----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            111111  11222233     22467899999999999999999     9999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-36  Score=285.75  Aligned_cols=253  Identities=24%  Similarity=0.346  Sum_probs=186.2

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|+||.||+|..  +++.+|+|++....   ........|+..+..++|+|++++++++.....  ...++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~lv   78 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGK--GSIYMV   78 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCC--CcEEEE
Confidence            56788999999999999988  47899999987653   112223456666666899999999999876521  357999


Q ss_pred             ecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||+++ +|.+++.+.  .+++..++.++.||+.||+|||+.        +++|+||||+||++++++.+||+|||++..
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------~~~h~dl~p~nil~~~~~~~~l~d~g~~~~  149 (287)
T cd07840          79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN--------GILHRDIKGSNILINNDGVLKLADFGLARP  149 (287)
T ss_pred             eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCcHHHeEEcCCCCEEEccccceee
Confidence            999985 899988653  799999999999999999999998        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......   ......++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.....    
T Consensus       150 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~~-----~~~~~~Dv~slG~~l~el~t~----------~~p~~~~~~----  207 (287)
T cd07840         150 YTKRNSA---DYTNRVITLWYRPPELLLGAT-----RYGPEVDMWSVGCILAELFLG----------KPIFQGSTE----  207 (287)
T ss_pred             ccCCCcc---cccccccccccCCceeeEccc-----cCChHHHHHHHHHHHHHHHhC----------CCCCCCCCh----
Confidence            6543211   112345678899999876531     456899999999999999999          455543211    


Q ss_pred             hHHHHhhhhhc------------------CCCCC--CCC---CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICID------------------QQRPV--LPN---RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~------------------~~~~~--~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+.......                  ...+.  .+.   ......++..+.+++++||+.||.+||++.++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         208 LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11111111000                  00000  000   0001113667899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=3.4e-36  Score=288.63  Aligned_cols=252  Identities=21%  Similarity=0.347  Sum_probs=186.7

Q ss_pred             ccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+.  ++.||||.+.......  .....|+..+... .||||+++++++.+.    ..++
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~   90 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD----SDVF   90 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC----CeEE
Confidence            67899999999999999999984  8999999986543221  1122333323333 599999999998776    3579


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++|||+. ++|.+++..  ..+++..+..++.|++.||.|||+..       +|+||||+|+||++++++.+||+|||++
T Consensus        91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-------~i~H~dl~p~nill~~~~~~kL~dfg~~  162 (296)
T cd06618          91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH-------GVIHRDVKPSNILLDASGNVKLCDFGIS  162 (296)
T ss_pred             EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC-------CEecCCCcHHHEEEcCCCCEEECccccc
Confidence            9999986 477776643  56899999999999999999999731       8999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+......     ....++..|+|||.+.+.....  .++.++||||||+++|||++|          ..||....   
T Consensus       163 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~--~~~~~~Di~slG~il~el~~g----------~~p~~~~~---  222 (296)
T cd06618         163 GRLVDSKAK-----TRSAGCAAYMAPERIDPPDPNP--KYDIRADVWSLGISLVELATG----------QFPYKNCK---  222 (296)
T ss_pred             hhccCCCcc-----cCCCCCccccCHhhcCCCCCcc--ccccchhHHHHHHHHHHHHhC----------CCCCCcch---
Confidence            765432211     2235778999999987542111  466899999999999999999          66665421   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...+.......  ...+..+.   ...++.++.+++.+||+.||++||++.++++.
T Consensus       223 ~~~~~~~~~~~--~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         223 TEFEVLTKILQ--EEPPSLPP---NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             hHHHHHHHHhc--CCCCCCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11222222221  11222221   11356789999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0612|consensus

Probab=100.00  E-value=1.3e-37  Score=320.40  Aligned_cols=252  Identities=24%  Similarity=0.321  Sum_probs=205.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeec------cCccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFS------RDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~------~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|.+.++||+|+||.|..+++  +++.+|.|++.+      .+..-+..|++|+..  .+.+-|+.++-.|.+.    
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~--~ns~Wiv~LhyAFQD~----  147 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVF--GNSEWIVQLHYAFQDE----  147 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHc--CCcHHHHHHHHHhcCc----
Confidence            47899999999999999999988  588999998854      233456667888777  6788999999888887    


Q ss_pred             cEEEeeecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .++|+|||||+||||..++.+.. +++.++..++..|..||.-||+.        |+|||||||+|||||..|++||+||
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m--------gyVHRDiKPDNvLld~~GHikLADF  219 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM--------GYVHRDIKPDNVLLDKSGHIKLADF  219 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc--------cceeccCCcceeEecccCcEeeccc
Confidence            46899999999999999998755 99999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |.+..+.......   ....+|||.|++||++...... .-.|++.+|+||+||++|||+.|          ..||... 
T Consensus       220 GsClkm~~dG~V~---s~~aVGTPDYISPEvLqs~~~~-~g~yG~ecDwWSlGV~~YEMlyG----------~TPFYad-  284 (1317)
T KOG0612|consen  220 GSCLKMDADGTVR---SSVAVGTPDYISPEVLQSQGDG-KGEYGRECDWWSLGVFMYEMLYG----------ETPFYAD-  284 (1317)
T ss_pred             hhHHhcCCCCcEE---eccccCCCCccCHHHHHhhcCC-ccccCCccchhhhHHHHHHHHcC----------CCcchHH-
Confidence            9987776544332   3456899999999999765443 12788999999999999999999          8898763 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc---HHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS---ALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~  423 (443)
                         ...+...++ ........+|+.   ..++.+.++||++.+ -+|+.|..   ++++..
T Consensus       285 ---slveTY~KI-m~hk~~l~FP~~---~~VSeeakdLI~~ll-~~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  285 ---SLVETYGKI-MNHKESLSFPDE---TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKN  337 (1317)
T ss_pred             ---HHHHHHHHH-hchhhhcCCCcc---cccCHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence               123333343 344455666632   337788999999877 56888887   777754

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.5e-36  Score=279.26  Aligned_cols=244  Identities=25%  Similarity=0.395  Sum_probs=193.0

Q ss_pred             cccccceeeeecCeEEEEEEEC--CceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++...  +..||+|++.....   .......|+..+..++|||++++++.+...    ...++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~----~~~~l   76 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK----GKLCI   76 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC----CEEEE
Confidence            4788899999999999999984  88999998865432   222234556666668999999999988766    45799


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      |+||+++++|.+++.+     ..+++..+..++.+++.||.|||+.        +++|+||+|+||+++.++.++|+|||
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--------~~~H~dl~~~nil~~~~~~~~l~d~~  148 (258)
T cd08215          77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR--------KILHRDIKPQNIFLTSNGLVKLGDFG  148 (258)
T ss_pred             EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC--------CEecccCChHHeEEcCCCcEEECCcc
Confidence            9999999999999864     5699999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++........    ......|++.|+|||.+.+.      .++.++|+||||+++|+|++|          ..||.... 
T Consensus       149 ~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~~~~~l~~g----------~~p~~~~~-  207 (258)
T cd08215         149 ISKVLSSTVD----LAKTVVGTPYYLSPELCQNK------PYNYKSDIWSLGCVLYELCTL----------KHPFEGEN-  207 (258)
T ss_pred             ceeecccCcc----eecceeeeecccChhHhccC------CCCccccHHHHHHHHHHHHcC----------CCCCCCCc-
Confidence            9976654321    11234688899999998765      566899999999999999999          66664431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ...+...... ...+.++     ...+..+.+++.+||+.+|++|||+.++++
T Consensus       208 ----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         208 ----LLELALKILK-GQYPPIP-----SQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             ----HHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                2222222211 1222232     235678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=3.5e-36  Score=293.39  Aligned_cols=263  Identities=21%  Similarity=0.258  Sum_probs=184.7

Q ss_pred             cccccceeeeecCeEEEEEEEC----CceeEEEEeeccCcc---chHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEA---SWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|++.+.||+|+||.||++...    +..||+|.+......   ......|+..+..+ +||||+++++.+.........
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4778899999999999999983    668999987542211   11223445455446 599999999876543222345


Q ss_pred             EEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++++||+. ++|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------givH~dlkp~Nili~~~~~~kl~Dfg~  151 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA--------NVLHRDLKPGNLLVNADCELKICDFGL  151 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence            789999987 58998885 46789999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.+...............||..|+|||.+.+..     .++.++||||||+++|+|++|+          .||......
T Consensus       152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-----~~~~~~Di~slGv~l~~l~~g~----------~pf~~~~~~  216 (332)
T cd07857         152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQ-----SYTKAIDVWSVGCILAELLGRK----------PVFKGKDYV  216 (332)
T ss_pred             ceecccccccccccccCcccCccccCcHHHhCCC-----CCCcHHHHHHHHHHHHHHHhCC----------cCCCCCCHH
Confidence            9866543322222223457899999999876531     4568999999999999999994          444331100


Q ss_pred             -----------CCChHHHHh--------hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 -----------DPSFDDMRK--------VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 -----------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                                 .+..+....        ........+..+-.......+..+.+++.+||+.||++|||+.++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         217 DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                       000000000        00000001111100111224567999999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=9.9e-36  Score=278.39  Aligned_cols=250  Identities=28%  Similarity=0.436  Sum_probs=195.1

Q ss_pred             cccccceeeeecCeEEEEEEEC--CceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|+..+.||+|++|.||+|...  ++.|++|++.....   .......|+..+..++||||+++++.+.....  ..+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~l   78 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEK--NTLNI   78 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCC--CeEEE
Confidence            4677899999999999999984  88999998865542   22333456666777999999999999876531  35799


Q ss_pred             eecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ++||+++++|.+++.+. .+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||.+..
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606          79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN--------GIVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence            99999999999998654 799999999999999999999998        999999999999999999999999999877


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......  .......++..|+|||.+.+.      ..+.++||||||+++|+|++|          ..||....   ..
T Consensus       151 ~~~~~~~--~~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~---~~  209 (260)
T cd06606         151 LGDIETG--EGTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATG----------KPPWSELG---NP  209 (260)
T ss_pred             ccccccc--ccccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC---ch
Confidence            6553321  011234688899999998776      466899999999999999999          66665532   11


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ....... ......+.++     ...+..+.+++.+||+.||++||++.++++
T Consensus       210 ~~~~~~~-~~~~~~~~~~-----~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         210 MAALYKI-GSSGEPPEIP-----EHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHhc-cccCCCcCCC-----cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            1111111 1112222233     334678999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=6.5e-36  Score=287.23  Aligned_cols=259  Identities=22%  Similarity=0.298  Sum_probs=189.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCC----
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRN----  204 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~----  204 (443)
                      ..++|++.+.||+|+||.||+|..  +|+.||+|++.....   .....+.|+..+..++||||+++++++.+...    
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            347899999999999999999998  588999998864322   12233456666667999999999999876541    


Q ss_pred             --cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        205 --SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       205 --~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                        ....+++|+||+++ +|..++..  ..+++..+..++.|++.||+|||+.        +|+|+||||+||++++++.+
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~i~H~dl~p~nili~~~~~~  155 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK--------NFLHRDIKCSNILLNNKGQI  155 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECCCCcE
Confidence              11368999999986 77777754  4689999999999999999999998        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||++..+......   ......++..|+|||.+.+..     .++.++|||||||++|||++|          ..|
T Consensus       156 kl~dfg~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~-----~~~~~~Di~slG~~~~el~~g----------~~~  217 (302)
T cd07864         156 KLADFGLARLYNSEESR---PYTNKVITLWYRPPELLLGEE-----RYGPAIDVWSCGCILGELFTK----------KPI  217 (302)
T ss_pred             EeCcccccccccCCccc---ccccceeccCccChHHhcCCC-----CCCchhHHHHHHHHHHHHHhC----------CCC
Confidence            99999999766543221   112235678899999886531     346799999999999999999          445


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCC-----CCC---------------CCC--CCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQR-----PVL---------------PNR--WVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      |....    ....+..........     +.+               ...  ......+..+.+++.+||+.||++|||+
T Consensus       218 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  293 (302)
T cd07864         218 FQANQ----ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTA  293 (302)
T ss_pred             CCCCC----hHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCH
Confidence            54321    111111111100000     000               000  0011246789999999999999999999


Q ss_pred             HHHHH
Q psy14889        419 LRVKK  423 (443)
Q Consensus       419 ~evl~  423 (443)
                      .++++
T Consensus       294 ~~il~  298 (302)
T cd07864         294 EEALN  298 (302)
T ss_pred             HHHhc
Confidence            99875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0587|consensus

Probab=100.00  E-value=2.1e-36  Score=304.92  Aligned_cols=259  Identities=26%  Similarity=0.427  Sum_probs=207.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHh-ccCCCceeeeeeccccC-CcccE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVL-LRHENILGYIGSDMTSR-NSCTQ  208 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~-~~~~~  208 (443)
                      ..+..|.+.+.||.|.+|.||+++.  +++.+|+|++....+.+...|.|..++.. -+|||++.++|++...+ ....+
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            3346799999999999999999876  78999999987665555555555544433 47999999999986433 33468


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +|||||||.+||..+++++   .++.|..+..|++.++.||.+||.+        .++|||||-.|||++.++.+||.||
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n--------kviHRDikG~NiLLT~e~~VKLvDF  167 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN--------KVIHRDIKGQNVLLTENAEVKLVDF  167 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc--------ceeeecccCceEEEeccCcEEEeee
Confidence            9999999999999999864   6799999999999999999999998        8999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |.+..+......    ..+..||+.|||||++......+ ..|+..+|+||||++..||.-|          ..|+-++.
T Consensus       168 GvSaQldsT~gr----RnT~iGtP~WMAPEViac~e~~d-~tyd~R~D~WsLGITaIEladG----------~PPl~DmH  232 (953)
T KOG0587|consen  168 GVSAQLDSTVGR----RNTFIGTPYWMAPEVIACDESPD-ATYDYRSDLWSLGITAIEMAEG----------APPLCDMH  232 (953)
T ss_pred             eeeeeeeccccc----ccCcCCCcccccceeeecccCCC-CCcccccchhhccceeehhcCC----------CCCccCcc
Confidence            999877654333    35678999999999998765554 2777899999999999999999          77887765


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +.       +.++.+...  +.|....+..-++++.++|..||..|.++||++.++++
T Consensus       233 Pm-------raLF~IpRN--PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  233 PM-------RALFLIPRN--PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             hh-------hhhccCCCC--CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            53       333322221  12222223456788999999999999999999988765

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=4e-36  Score=286.89  Aligned_cols=254  Identities=24%  Similarity=0.334  Sum_probs=190.2

Q ss_pred             cccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCc-----cchHHHHHHHHHHhc-cCCCceeeeeeccccCCc
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE-----ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNS  205 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~  205 (443)
                      +|++.+.||+|+||.||++..     +++.||||++.....     .....+.|+..+..+ +||||+++++.+...   
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~---   77 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD---   77 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC---
Confidence            477889999999999999875     467899998864321     112233455555557 699999999887665   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..+++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +++|+||||+||+++.++.++|+|
T Consensus        78 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--------~~~H~dl~p~nil~~~~~~~~l~d  148 (288)
T cd05583          78 -TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL--------GIIYRDIKLENILLDSEGHVVLTD  148 (288)
T ss_pred             -CEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHeEECCCCCEEEEE
Confidence             457899999999999999864 5689999999999999999999988        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+.......   .....|+..|+|||.+.+...    ..+.++||||||+++|||++|          ..||...
T Consensus       149 fg~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~----~~~~~~Dv~slG~il~el~tg----------~~p~~~~  211 (288)
T cd05583         149 FGLSKEFLAEEEER---AYSFCGTIEYMAPEVIRGGSG----GHDKAVDWWSLGVLTFELLTG----------ASPFTVD  211 (288)
T ss_pred             Cccccccccccccc---cccccCCccccCHHHhcCCCC----CCcchhhhHHHHHHHHHHHhC----------CCCcccC
Confidence            99987654332111   123468889999999876421    245789999999999999999          6666432


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      .. ......+.+.+..  ..+..+     ...+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus       212 ~~-~~~~~~~~~~~~~--~~~~~~-----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         212 GE-QNSQSEISRRILK--SKPPFP-----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             cc-cchHHHHHHHHHc--cCCCCC-----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            11 1112222222221  112222     2245679999999999999999998888776654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=7.3e-36  Score=285.39  Aligned_cols=250  Identities=24%  Similarity=0.357  Sum_probs=187.1

Q ss_pred             cccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCc-----cchHHHHHHHHHHhc-cCCCceeeeeeccccCCc
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE-----ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNS  205 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~  205 (443)
                      +|++.+.||+|+||.||++..     +|..||+|++.....     .....+.|+..+..+ +|+||+++++.+...   
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~---   77 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD---   77 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC---
Confidence            477889999999999999986     578999998864321     112224455555557 699999999887765   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..+++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +++||||+|+|||++.++.+||+|
T Consensus        78 -~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~--------~i~H~dl~p~nil~~~~~~~kl~d  148 (290)
T cd05613          78 -TKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL--------GIIYRDIKLENILLDSNGHVVLTD  148 (290)
T ss_pred             -CeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHeEECCCCCEEEee
Confidence             457899999999999999864 5689999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.........   ......|+..|+|||.+.....    .++.++||||||+++|||++|          ..||...
T Consensus       149 fg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~----~~~~~~Dv~slG~~l~~ll~g----------~~p~~~~  211 (290)
T cd05613         149 FGLSKEFHEDEVE---RAYSFCGTIEYMAPDIVRGGDG----GHDKAVDWWSMGVLMYELLTG----------ASPFTVD  211 (290)
T ss_pred             Cccceeccccccc---ccccccCCcccCChhhccCCCC----CCCccccHHHHHHHHHHHhcC----------CCCCCcC
Confidence            9998765432111   1123468899999999875321    345789999999999999999          5565432


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .. ......+...+..  ..+..+     ..++..+.+++++||+.||++||     +++++++
T Consensus       212 ~~-~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         212 GE-KNSQAEISRRILK--SEPPYP-----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             Cc-cccHHHHHHHhhc--cCCCCC-----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            11 1122222222211  122222     23566799999999999999997     6677665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.4e-36  Score=285.55  Aligned_cols=248  Identities=23%  Similarity=0.324  Sum_probs=191.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|.+.+.||+|+||.||+|..  ++..||+|++.....    .......|...+..++ ||||+++++++...    ..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----~~   76 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----EN   76 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC----ce
Confidence            3688999999999999999988  689999998864321    1112223444455577 99999999988765    45


Q ss_pred             EEeeecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .++||||+++++|.+++.+. .+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|||+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~--------~~~H~dl~~~ni~i~~~~~~~l~df~~  148 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK--------GIIHRDLKPENILLDKDMHIKITDFGT  148 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCHHHeEECCCCCEEecCCcc
Confidence            79999999999999999764 799999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcC----------------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        288 AVSYSQLSNKM----------------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       288 a~~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +..........                ........|+..|+|||.+...      ..+.++||||||++++|+++|    
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~~l~~g----  218 (280)
T cd05581         149 AKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK------PAGKSSDLWALGCIIYQMLTG----  218 (280)
T ss_pred             ccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC------CCChhhhHHHHHHHHHHHHhC----
Confidence            87665432210                0112334678899999988765      566899999999999999999    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH----HHHHH
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA----LRVKK  423 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----~evl~  423 (443)
                            ..||....    .........   .....++     ...+..+.+++++||+.||++|||+    .++++
T Consensus       219 ------~~p~~~~~----~~~~~~~~~---~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         219 ------KPPFRGSN----EYLTFQKIL---KLEYSFP-----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             ------CCCCCCcc----HHHHHHHHH---hcCCCCC-----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence                  66766532    112222222   1122222     2245679999999999999999999    77654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.8e-36  Score=293.36  Aligned_cols=258  Identities=22%  Similarity=0.293  Sum_probs=188.8

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--  204 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--  204 (443)
                      ..+.++|++.+.||+|+||.||+|..  +++.||+|++......   ......|+..+..++||||+++++++.....  
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~   92 (345)
T cd07877          13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE   92 (345)
T ss_pred             hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence            44558899999999999999999986  6889999988643211   1222346666667999999999998764321  


Q ss_pred             cccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      .....+++++++ +++|.+++....+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|
T Consensus        93 ~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~NIll~~~~~~kl~d  163 (345)
T cd07877          93 EFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA--------DIIHRDLKPSNLAVNEDCELKILD  163 (345)
T ss_pred             ccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCChHHEEEcCCCCEEEec
Confidence            113468888887 67999998878899999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.....       .....|+..|+|||.+.+..     .++.++|||||||++|||++|          ..||...
T Consensus       164 fg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwslG~il~el~~g----------~~pf~~~  221 (345)
T cd07877         164 FGLARHTDDE-------MTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG----------RTLFPGT  221 (345)
T ss_pred             cccccccccc-------ccccccCCCccCHHHHhCcc-----CCCchhhHHHHHHHHHHHHhC----------CCCCCCC
Confidence            9998754321       12346788999999886531     456799999999999999999          4455332


Q ss_pred             CCCCCChHHHHhh-----------------------hhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        365 VPMDPSFDDMRKV-----------------------ICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       365 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      ..    .......                       .......+...........+..+.+++.+||+.||.+|||+.++
T Consensus       222 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~  297 (345)
T cd07877         222 DH----IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA  297 (345)
T ss_pred             CH----HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHH
Confidence            10    0111110                       00000001000000001235678999999999999999999998


Q ss_pred             HHH
Q psy14889        422 KKT  424 (443)
Q Consensus       422 l~~  424 (443)
                      +..
T Consensus       298 l~h  300 (345)
T cd07877         298 LAH  300 (345)
T ss_pred             hcC
Confidence            864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0666|consensus

Probab=100.00  E-value=2e-37  Score=279.25  Aligned_cols=271  Identities=23%  Similarity=0.316  Sum_probs=194.5

Q ss_pred             ccccccceeeeecCeEEEEEEEC------CceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..|+....||+|+||.||+|.-.      .+.+|+|.++....   -+...-+||..++.++||||+.+..++...+   
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d---  100 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD---  100 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC---
Confidence            57889999999999999999652      24789998865422   2334456777777799999999999998753   


Q ss_pred             cEEEeeecccCcccHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---  277 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---  277 (443)
                      ..+||++||.+. ||.+.++-      ..++...+..|+.||+.|+.|||++        =|+||||||.|||+..+   
T Consensus       101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N--------WvlHRDLKPaNIlvmgdgpe  171 (438)
T KOG0666|consen  101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN--------WVLHRDLKPANILVMGDGPE  171 (438)
T ss_pred             ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh--------heeeccCCcceEEEeccCCc
Confidence            468999999997 99998842      4588899999999999999999999        68999999999999887   


Q ss_pred             -CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc-
Q psy14889        278 -GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE-  355 (443)
Q Consensus       278 -~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~-  355 (443)
                       |.+||+|||+++.+....... ......+-|++|.|||++.+..     .||++.||||.||++.||+|-.+.+.-.+ 
T Consensus       172 rG~VKIaDlGlaR~~~~plkpl-~s~d~VVVTiWYRAPELLLGa~-----hYT~AiDvWAiGCIfaElLtl~PlF~g~E~  245 (438)
T KOG0666|consen  172 RGRVKIADLGLARLFNNPLKPL-ASLDPVVVTIWYRAPELLLGAR-----HYTKAIDVWAIGCIFAELLTLEPLFKGREE  245 (438)
T ss_pred             cCeeEeecccHHHHhhcccccc-ccCCceEEEEEecChHHhcccc-----cccchhhhHHHHHHHHHHHccCccccchhh
Confidence             899999999999887654332 1234567899999999999874     66789999999999999999876542111 


Q ss_pred             --ccCCCCCC----------------CCCCCCChHHHH---hhhhhcCCCCC-CCCCCCC--chhHHHHHHHHHHHhcCC
Q psy14889        356 --EYKAPYHD----------------LVPMDPSFDDMR---KVICIDQQRPV-LPNRWVS--DSTLNAMTKVMKECWHQN  411 (443)
Q Consensus       356 --~~~~P~~~----------------~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~--~~~~~~l~~li~~cl~~d  411 (443)
                        ..+.||+.                .++.-....+..   ..+........ +. .|..  ..-++...+|+.++|..|
T Consensus       246 k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~-~~~~~~k~k~~~a~~LL~klL~yD  324 (438)
T KOG0666|consen  246 KIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLH-KYYHKHKVKDPSALDLLQKLLTYD  324 (438)
T ss_pred             hcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHH-HHHHHhcCCCchHHHHHHHHhccC
Confidence              11224432                111100000110   00000001000 00 0000  001233789999999999


Q ss_pred             cCCCCcHHHHHHHH
Q psy14889        412 ANVRLSALRVKKTL  425 (443)
Q Consensus       412 P~~Rps~~evl~~L  425 (443)
                      |.+|.|+++.++..
T Consensus       325 P~kRIta~qAleh~  338 (438)
T KOG0666|consen  325 PIKRITAEQALEHP  338 (438)
T ss_pred             chhhccHHHHhccc
Confidence            99999999987643

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-36  Score=284.64  Aligned_cols=248  Identities=25%  Similarity=0.345  Sum_probs=184.0

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--cchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--ASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|+||.||+|..  +++.||||.+.....  .......|+..+..++ |+||+++++++...    ...++|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~----~~~~lv   76 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN----DELYFV   76 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC----CcEEEE
Confidence            56788999999999999998  478899998754322  2223345666666688 99999999998775    457999


Q ss_pred             ecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+ +|+|.+++..   ..+++.++..++.|++.||.|||+.        +++|+||+|+||++++++.++|+|||++.
T Consensus        77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~--------~i~H~dl~~~ni~i~~~~~~~l~d~~~~~  147 (283)
T cd07830          77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH--------GFFHRDLKPENLLVSGPEVVKIADFGLAR  147 (283)
T ss_pred             EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCChhhEEEcCCCCEEEeecccce
Confidence            9999 7899998864   3689999999999999999999998        99999999999999999999999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .......     .....++..|+|||.+....     .++.++|+||||+++|||++|+          .||.....   
T Consensus       148 ~~~~~~~-----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~s~G~~l~el~~g~----------~~~~~~~~---  204 (283)
T cd07830         148 EIRSRPP-----YTDYVSTRWYRAPEILLRST-----SYSSPVDIWALGCIMAELYTLR----------PLFPGSSE---  204 (283)
T ss_pred             eccCCCC-----cCCCCCcccccCceeeecCc-----CcCCccchhhHHHHHHHHHhCC----------CccCCCCh---
Confidence            6543221     12346788999999886542     4568999999999999999994          44433210   


Q ss_pred             ChHHHHhhhh----------------hcCCCCCCCC-------CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVIC----------------IDQQRPVLPN-------RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .+...+...                ........+.       ... ...+..+.+++++||+.||++|||++|++.
T Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         205 -IDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLI-PNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             -HHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHc-ccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             011100000                0000000000       000 112467999999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.3e-36  Score=282.21  Aligned_cols=244  Identities=24%  Similarity=0.300  Sum_probs=184.6

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||.||++..  +|+.+|+|.+.....    .....+.|+..+..++||||+++++.+...    ...++++||++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK----KNLYLVMEYLP   76 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC----cEEEEEEecCC
Confidence            68999999999998  489999998854432    122234556666668999999999887665    45799999999


Q ss_pred             cccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        218 FGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       218 ~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      +++|.+++.+ ..+++..+..++.||+.||+|||+.        +++|+||+|+||+++.++.+||+|||++........
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~--------~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~  148 (265)
T cd05579          77 GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSN--------GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQ  148 (265)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--------CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcc
Confidence            9999999975 5789999999999999999999998        999999999999999999999999999865433211


Q ss_pred             cC----CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        297 KM----DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       297 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ..    ........++..|+|||.+...      ..+.++||||||+++|||++|          ..||....     ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g----------~~p~~~~~-----~~  207 (265)
T cd05579         149 INLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVG----------IPPFHGET-----PE  207 (265)
T ss_pred             cccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhC----------CCCCCCCC-----HH
Confidence            00    0112334678899999998765      566899999999999999999          66765431     22


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      ........  .....+..   ...+..+.+++.+||+.+|.+|||+.++.+.|
T Consensus       208 ~~~~~~~~--~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         208 EIFQNILN--GKIEWPED---VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HHHHHHhc--CCcCCCcc---ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence            22222211  11222221   11367899999999999999999995555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=7.5e-36  Score=285.85  Aligned_cols=252  Identities=24%  Similarity=0.318  Sum_probs=182.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||+|.+......   ......|+..+..++||||+++++++...    ...+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   77 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE----KRLY   77 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC----CeEE
Confidence            4789999999999999999987  5789999987543221   12223456666669999999999998766    4579


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFG  286 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfG  286 (443)
                      +||||++ ++|.+++..   ..+++..+..++.||+.||+|||+.        +++|+||+|+||+++. ++.+||+|||
T Consensus        78 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~i~H~dl~p~nill~~~~~~~kl~dfg  148 (294)
T PLN00009         78 LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH--------RVLHRDLKPQNLLIDRRTNALKLADFG  148 (294)
T ss_pred             EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCCcceEEEECCCCEEEEcccc
Confidence            9999996 588887743   2357888889999999999999998        9999999999999985 4579999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.........    .....++..|+|||.+.+..     .++.++||||||+++|||+||          ..||.... 
T Consensus       149 ~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~-----~~~~~~Dv~slG~i~~~l~tg----------~~pf~~~~-  208 (294)
T PLN00009        149 LARAFGIPVRT----FTHEVVTLWYRAPEILLGSR-----HYSTPVDIWSVGCIFAEMVNQ----------KPLFPGDS-  208 (294)
T ss_pred             cccccCCCccc----cccCceeecccCHHHHhCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            99755432111    12346788999999886541     456799999999999999999          44544321 


Q ss_pred             CCCChHHHHhhhhhcC------------------CCCCCCCC---CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQ------------------QRPVLPNR---WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~------------------~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ..+...+......                  ..+..+..   ......+..+.+++.+||+.||++||++.++++
T Consensus       209 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        209 ---EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             ---HHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence               1111111111000                  00000000   001224567899999999999999999999886

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1e-35  Score=289.64  Aligned_cols=194  Identities=23%  Similarity=0.342  Sum_probs=149.5

Q ss_pred             ceeeee--cCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKG--RYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G--~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ..||+|  +||+||++++  +|+.||+|++.......   ...+.|+..+..++||||+++++++....    ..++|+|
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----~~~~v~e   79 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS----WLWVISP   79 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC----ceEEEEe
Confidence            456666  9999999988  68999999886433211   22244555555689999999999998763    4799999


Q ss_pred             ccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        215 YHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       215 ~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+.+|+|.+++.+   ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+|++||+.+...
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--------~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~  151 (328)
T cd08226          80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN--------GYIHRNIKASHILISGDGLVSLSGLSHLYSL  151 (328)
T ss_pred             cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence            9999999999864   4589999999999999999999988        9999999999999999999999999865333


Q ss_pred             cccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        292 SQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       292 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      ........   .......++..|+|||++.+...    .++.++|||||||++|||++|+.|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----~~~~~~DiwslG~~l~el~~g~~p~  210 (328)
T cd08226         152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLY----GYNVKSDIYSVGITACELATGRVPF  210 (328)
T ss_pred             hccCccccccccccccccCccCccChhhhcCCCC----CCCchhhHHHHHHHHHHHHhCCCCC
Confidence            22111100   00112235667999999876421    4568999999999999999995543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=276.75  Aligned_cols=244  Identities=30%  Similarity=0.522  Sum_probs=192.7

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|++.+.||+|+||.||++..  +++.||+|.+.....   .......|+..+..++|+|++++++++.+.    ...++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~   76 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS----DSLYI   76 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC----CEEEE
Confidence            477889999999999999987  578999998865543   122234566666668999999999998765    45799


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +|||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +|+|+||||+||+++.++.++|+|||++..
T Consensus        77 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  148 (254)
T cd06627          77 ILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ--------GVIHRDIKAANILTTKDGVVKLADFGVATK  148 (254)
T ss_pred             EEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC--------CcccCCCCHHHEEECCCCCEEEecccccee
Confidence            9999999999999865 6789999999999999999999998        999999999999999999999999999977


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....++..|+|||.+.+.      ..+.++||||||+++|||++|          ..||....    .
T Consensus       149 ~~~~~~~----~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~~lG~~l~~l~~g----------~~p~~~~~----~  204 (254)
T cd06627         149 LNDVSKD----DASVVGTPYWMAPEVIEMS------GASTASDIWSLGCTVIELLTG----------NPPYYDLN----P  204 (254)
T ss_pred             cCCCccc----ccccccchhhcCHhhhcCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCcc----H
Confidence            6543321    1234678899999998765      456799999999999999999          66665431    1


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ........  ....+.++     ...+..+.+++.+||+.+|++|||+.+++.
T Consensus       205 ~~~~~~~~--~~~~~~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         205 MAALFRIV--QDDHPPLP-----EGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHh--ccCCCCCC-----CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            12222221  12222222     335678999999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=6.7e-36  Score=290.83  Aligned_cols=257  Identities=22%  Similarity=0.269  Sum_probs=187.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ..++|++.+.||+|+||.||++..  +++.||||++.....   .......|+..+..++||||+++++++....   ..
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~   84 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL---ED   84 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---Cc
Confidence            457899999999999999999986  688999998753221   1122234566666699999999999886543   24


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .++++||+. ++|.++++...+++..+..++.|++.||.|||+.        +|+||||+|+||++++++.+||+|||++
T Consensus        85 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~--------~iiH~dl~p~Nili~~~~~~~l~dfg~~  155 (328)
T cd07856          85 IYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA--------GVVHRDLKPSNILINENCDLKICDFGLA  155 (328)
T ss_pred             EEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEeECCCCCEEeCccccc
Confidence            689999985 6999999888899999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ......       .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.......
T Consensus       156 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~il~el~tg----------~~~f~~~~~~~  213 (328)
T cd07856         156 RIQDPQ-------MTGYVSTRYYRAPEIMLTWQ-----KYDVEVDIWSAGCIFAEMLEG----------KPLFPGKDHVN  213 (328)
T ss_pred             cccCCC-------cCCCcccccccCceeeeccC-----CcCcHHHHHHHHHHHHHHHhC----------CCCCCCCCHHH
Confidence            654321       12346788999999876531     456899999999999999999          44543321100


Q ss_pred             -----------CChHHHH--------hhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 -----------PSFDDMR--------KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 -----------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                                 +..+...        +...........+..-.....+..+.++|++||+.+|++|||+.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                       0000000        0000000001111000012245789999999999999999999998765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1e-35  Score=286.98  Aligned_cols=248  Identities=26%  Similarity=0.384  Sum_probs=187.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---c-hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---S-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+.|+..+.||+|+||.||+|..  ++..+|+|.+......   . .....|+..+..++|+|++++++++...    ..
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   89 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----HT   89 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC----Ce
Confidence            35688889999999999999997  5788999987542211   1 1123456666669999999999998776    35


Q ss_pred             EEeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+. |+|.+++.  ...+++.++..++.|++.||.|||+.        +++||||||+||+++.++.+||+|||
T Consensus        90 ~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~--------~i~H~dl~p~nil~~~~~~~kl~dfg  160 (308)
T cd06634          90 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--------NMIHRDVKAGNILLSEPGLVKLGDFG  160 (308)
T ss_pred             eEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHhEEECCCCcEEECCcc
Confidence            799999997 68887764  35689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++......        ....|+..|+|||.+.+...   ..++.++|||||||++|||++|          ..||.... 
T Consensus       161 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g----------~~p~~~~~-  218 (308)
T cd06634         161 SASIMAPA--------NXFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAER----------KPPLFNMN-  218 (308)
T ss_pred             cceeecCc--------ccccCCccccCHHHHhhccc---CCCCcccchHHHHHHHHHHHcC----------CCCCcccc-
Confidence            98654321        23467889999999753211   1456799999999999999999          56665431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                         .........  ....+...    ....+..+.+++.+||+.+|++||++.++++.--
T Consensus       219 ---~~~~~~~~~--~~~~~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         219 ---AMSALYHIA--QNESPALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             ---HHHHHHHHh--hcCCCCcC----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence               111111111  11122221    2335677999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=7.3e-36  Score=280.61  Aligned_cols=243  Identities=23%  Similarity=0.376  Sum_probs=184.3

Q ss_pred             cccccceeeeecCeEEEEEEEC--CceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +|.+.+.||+|+||.||++...  +..+++|+++...      ........|+..+..++||||+++++++.+..    .
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~   76 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----A   76 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC----c
Confidence            4788899999999999999873  4456666554311      11222334566666699999999999987663    4


Q ss_pred             EEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                      .++|+||+++++|.+++..     ..+++..++.++.|++.||.|||+.        +++|+||||+||++++ +.+||+
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~i~h~~l~~~nili~~-~~~~l~  147 (260)
T cd08222          77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR--------RILHRDLKAKNIFLKN-NLLKIG  147 (260)
T ss_pred             eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--------CccccCCChhheEeec-CCEeec
Confidence            7899999999999988752     5689999999999999999999998        9999999999999975 569999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++.........    .....|+..|+|||.+.+.      .++.++|+||||+++|+|++|          ..||..
T Consensus       148 d~g~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~slG~~~~~l~~~----------~~~~~~  207 (260)
T cd08222         148 DFGVSRLLMGSCDL----ATTFTGTPYYMSPEALKHQ------GYDSKSDIWSLGCILYEMCCL----------AHAFEG  207 (260)
T ss_pred             ccCceeecCCCccc----ccCCCCCcCccCHHHHccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCC
Confidence            99998765432211    1234678899999988655      556789999999999999999          566643


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .    ..........  ....+..+     ...+.++.+++.+||+.||++||++.++++
T Consensus       208 ~----~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         208 Q----NFLSVVLRIV--EGPTPSLP-----ETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             c----cHHHHHHHHH--cCCCCCCc-----chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            2    1112222221  12222222     346678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.4e-36  Score=293.35  Aligned_cols=263  Identities=19%  Similarity=0.293  Sum_probs=193.5

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCC--
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRN--  204 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--  204 (443)
                      +.+.++|++.+.||+|+||.||++..  ++..||||++.......   .....|+..+..++||||+++++++.....  
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            34567899999999999999999987  58899999875432211   122346666667999999999998865432  


Q ss_pred             cccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ....+++||||+ +++|.+++....+++..+..++.|++.||+|||+.        +|+||||||+||+++.++.+||+|
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--------gi~H~dlkp~Nill~~~~~~kl~d  161 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA--------GIIHRDLKPGNLAVNEDCELKILD  161 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEee
Confidence            123568999998 67999999888899999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++......       .....++..|+|||.+.+..     .++.++|+||||+++|+|++|          ..||...
T Consensus       162 fg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~ll~~l~~g----------~~pf~~~  219 (343)
T cd07880         162 FGLARQTDSE-------MTGYVVTRWYRAPEVILNWM-----HYTQTVDIWSVGCIMAEMLTG----------KPLFKGH  219 (343)
T ss_pred             cccccccccC-------ccccccCCcccCHHHHhCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCC
Confidence            9998755321       12346788999999986531     456799999999999999999          5555432


Q ss_pred             CCCCCChHHHHhhhhhcC--------------------CCCCCC-CC--CCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQ--------------------QRPVLP-NR--WVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      ..    ............                    ..+... ..  .....++..+.+++.+|++.||++|||+.++
T Consensus       220 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~  295 (343)
T cd07880         220 DH----LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA  295 (343)
T ss_pred             CH----HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence            11    111111100000                    000000 00  0012345678999999999999999999999


Q ss_pred             H--HHHHHHh
Q psy14889        422 K--KTLIKLA  429 (443)
Q Consensus       422 l--~~L~~l~  429 (443)
                      +  ..++...
T Consensus       296 l~~~~~~~~~  305 (343)
T cd07880         296 LAHPYFEEFH  305 (343)
T ss_pred             hcCccHhhhc
Confidence            8  4454443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0669|consensus

Probab=100.00  E-value=5.1e-38  Score=275.57  Aligned_cols=274  Identities=24%  Similarity=0.323  Sum_probs=195.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCccc---
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT---  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~---  207 (443)
                      +.|....+||+|.||+||+|+.  .|+.||+|++.-.++   .....-+|+..+..++|+|++.++..|........   
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            4677788999999999999987  578899986533222   12223345555555999999999999876543333   


Q ss_pred             -EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 -QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 -~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       .+|+|+.+|+. ||...|.+  .+++..++.+++.++..||.|+|..        .|+|||+||.|+||+.++.+||+|
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~--------kilHRDmKaaNvLIt~dgilklAD  167 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN--------KILHRDMKAANVLITKDGILKLAD  167 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh--------hHHhhcccHhhEEEcCCceEEeec
Confidence             38999999997 99999975  5799999999999999999999998        899999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc--------
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE--------  356 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~--------  356 (443)
                      ||+++.+...........+.++-|.+|.+||.+.+..     .|+++.|||+.||++.||+||.+.+..-.+        
T Consensus       168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r-----~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is  242 (376)
T KOG0669|consen  168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR-----EYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS  242 (376)
T ss_pred             cccccceecccccCCCCcccceeeeecCCHHHhhccc-----ccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence            9999888776555544456678899999999999874     667899999999999999999653220000        


Q ss_pred             --cCCCCCCCCCCCCChHHHHhhhhhc----CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        357 --YKAPYHDLVPMDPSFDDMRKVICID----QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       357 --~~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ...--.+.+|+-.....+..+ ..+    .....+++...+-.-.++..+|+.+++..||.+|+++++++..
T Consensus       243 ~LcGs~tkevWP~~d~lpL~~si-e~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  243 QLCGSITKEVWPNVDNLPLYQSI-ELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             HHhccCCcccCCCcccchHHHhc-cCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence              000000111111111111111 000    0000011100000012468899999999999999999998753

>KOG0690|consensus

Probab=100.00  E-value=4.8e-37  Score=278.25  Aligned_cols=239  Identities=23%  Similarity=0.343  Sum_probs=190.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|.+.++||+|.||.|-+++-  +++.+|+|++++.-.-.    ..-..|-..+...+||.+..+.-.|.+.    .
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~----d  241 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ----D  241 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC----c
Confidence            347899999999999999999876  69999999886532111    1111233344448999999888777766    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ++++||||..+|.|.-+|++ ..+++.....+...|++||.|||++        +||.||||.+|.|+|.+|++||+|||
T Consensus       242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~--------~ivYRDlKLENLlLDkDGHIKitDFG  313 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR--------NIVYRDLKLENLLLDKDGHIKITDFG  313 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC--------CeeeeechhhhheeccCCceEeeecc
Confidence            68999999999999999975 5689999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.--..    .....+++||+.|.|||++...      .|+.+.|+|.+||++|||++|          +.||...  
T Consensus       314 LCKE~I~~----g~t~kTFCGTPEYLAPEVleDn------DYgraVDWWG~GVVMYEMmCG----------RLPFyn~--  371 (516)
T KOG0690|consen  314 LCKEEIKY----GDTTKTFCGTPEYLAPEVLEDN------DYGRAVDWWGVGVVMYEMMCG----------RLPFYNK--  371 (516)
T ss_pred             cchhcccc----cceeccccCChhhcCchhhccc------cccceeehhhhhHHHHHHHhc----------cCccccc--
Confidence            99643322    2224678999999999999987      788999999999999999999          7888764  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL  416 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  416 (443)
                         +.+.+..++...  ...+|     ...+++.+.|+...|..||.+|.
T Consensus       372 ---dh~kLFeLIl~e--d~kFP-----r~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  372 ---DHEKLFELILME--DLKFP-----RTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             ---chhHHHHHHHhh--hccCC-----ccCCHHHHHHHHHHhhcChHhhc
Confidence               223333433322  22333     33566899999999999999997

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.5e-35  Score=285.79  Aligned_cols=260  Identities=24%  Similarity=0.322  Sum_probs=186.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCc----c
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNS----C  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~----~  206 (443)
                      ++|++.+.||+|+||.||+|..  +++.+|||++......   ......|+..+..++||||+++++++......    .
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   87 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR   87 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence            7899999999999999999998  5789999987543221   12223455566669999999999987654321    2


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..+++|+||+.. +|...+..  ..+++.++..++.|+++||.|||+.        +|+|+||||+||++++++.+||+|
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~--------~i~H~dl~p~nil~~~~~~~~l~d  158 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN--------HILHRDIKAANILIDNQGILKIAD  158 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECCCCCEEECc
Confidence            457999999875 77777653  4699999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCC-------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        285 FGLAVSYSQLSNKMD-------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       285 fGla~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      ||+++..........       .......|++.|+|||.+.+..     .++.++||||||+++|||++|+         
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~il~el~~g~---------  224 (311)
T cd07866         159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGER-----RYTTAVDIWGIGCVFAEMFTRR---------  224 (311)
T ss_pred             CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCC-----ccCchhHhHHHHHHHHHHHhCC---------
Confidence            999976543322111       1112346788999999886541     4567999999999999999994         


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcC--------------------CCCCCCCCC--CCchhHHHHHHHHHHHhcCCcCCC
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQ--------------------QRPVLPNRW--VSDSTLNAMTKVMKECWHQNANVR  415 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~R  415 (443)
                       .||.+...    ............                    .....+...  .-......+.+++.+||+.||++|
T Consensus       225 -~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  299 (311)
T cd07866         225 -PILQGKSD----IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKR  299 (311)
T ss_pred             -CCCCCCCH----HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccC
Confidence             44433211    011111100000                    000000000  001123568899999999999999


Q ss_pred             CcHHHHHH
Q psy14889        416 LSALRVKK  423 (443)
Q Consensus       416 ps~~evl~  423 (443)
                      ||+.+++.
T Consensus       300 ~t~~ell~  307 (311)
T cd07866         300 LTASDALE  307 (311)
T ss_pred             cCHHHHhc
Confidence            99999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-35  Score=281.22  Aligned_cols=252  Identities=26%  Similarity=0.331  Sum_probs=183.1

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-----chHHHHHHHH-HHhccCCCceeeeeeccccCC-cccE
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-----SWSRETEIYS-TVLLRHENILGYIGSDMTSRN-SCTQ  208 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-----~~~~e~ei~~-~~~l~H~nIv~l~g~~~~~~~-~~~~  208 (443)
                      |++.+.||+|+||.||+|++  +++.||+|++......     ....|.++.. +..++||||+++++++...+. ....
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            56788999999999999998  4789999988643222     1222333322 223579999999999876543 2234


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ++++|||+. ++|.+++.+   ..+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+||
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~--------~i~h~~l~~~nili~~~~~~~l~df  151 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH--------RIVHRDLKPQNILVTSDGQVKIADF  151 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCChhhEEEccCCCEEEecc
Confidence            799999997 489888854   3589999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++..+.....     .....++..|+|||.+.+.      .++.++||||||+++|||++|          ..||....
T Consensus       152 g~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~------~~~~~~Di~s~G~~l~~l~~~----------~~~~~~~~  210 (287)
T cd07838         152 GLARIYSFEMA-----LTSVVVTLWYRAPEVLLQS------SYATPVDMWSVGCIFAELFRR----------RPLFRGTS  210 (287)
T ss_pred             CcceeccCCcc-----cccccccccccChHHhccC------CCCCcchhhhHHHHHHHHHhC----------CCcccCCC
Confidence            99876643221     1233578899999999776      566899999999999999999          44554321


Q ss_pred             CCCCChHHHHhhhhhcCC-------------CCCCCCC------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQ-------------RPVLPNR------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .    .+...+.......             ....+..      ......+..+.+++++||+.||++||++.+++.
T Consensus       211 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         211 E----ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             h----HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            1    1111111110000             0000000      001124567889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1006|consensus

Probab=100.00  E-value=5.7e-38  Score=277.26  Aligned_cols=252  Identities=23%  Similarity=0.359  Sum_probs=192.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.+-...||.|+||+|++-.+  .|+..|||++......    +...|.+.-.. .-+-||||+++|.+...    +..
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mk-s~~cp~IVkfyGa~F~E----Gdc  138 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMK-SSNCPNIVKFYGALFSE----GDC  138 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHh-hcCCcHHHHHhhhhhcC----Cce
Confidence            3455677899999999999877  5899999999765432    22223333322 24789999999998766    346


Q ss_pred             EeeecccCcccHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        210 WLVTHYHSFGSLYDHLN------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                      |+.||+|.- ||+.+.+      +..+++.-+-.|......||.||-...       .|||||+||+|||++..|.+||+
T Consensus       139 WiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l-------kiIHRDvKPSNILldr~G~vKLC  210 (361)
T KOG1006|consen  139 WICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL-------KIIHRDVKPSNILLDRHGDVKLC  210 (361)
T ss_pred             eeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh-------hhhhccCChhheEEecCCCEeee
Confidence            999999975 7766543      467999999999999999999999874       89999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++..+.....     .+.-.|...|||||.+.....    .|..+|||||||++|||++||          ..||.+
T Consensus       211 DFGIcGqLv~SiA-----kT~daGCrpYmAPERi~p~~~----gyDiRSDvWSLGITL~EvAtG----------~fPyr~  271 (361)
T KOG1006|consen  211 DFGICGQLVDSIA-----KTVDAGCRPYMAPERIDPSDK----GYDIRSDVWSLGITLYEVATG----------NFPYRK  271 (361)
T ss_pred             cccchHhHHHHHH-----hhhccCCccccChhccCCccC----CcchhhhhhhhcceEeeeecC----------CCCcch
Confidence            9999876654322     233478899999999876532    466899999999999999999          889988


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      |..   .++.+...+..+  .|.+......-+.+..+..++..|+.+|-+.||...++.+.
T Consensus       272 w~s---vfeql~~Vv~gd--pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  272 WDS---VFEQLCQVVIGD--PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHH---HHHHHHHHHcCC--CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            732   445555555322  23332222223356789999999999999999999998763

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-35  Score=281.06  Aligned_cols=250  Identities=25%  Similarity=0.343  Sum_probs=186.5

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |+..+.||+|++|.||+|..  +++.+|+|.+......   ....+.|+..+..++|+||+++++++...    ...++|
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v   76 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK----GDLYLV   76 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC----CCEEEE
Confidence            45678899999999999987  5889999987654322   22334566666668999999999998776    357999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||+++ +|.+++..  ..+++..+..++.|++.||.|||+.        +|+|+||||+||+++.++.+||+|||.+..
T Consensus        77 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~dl~p~nili~~~~~~~l~df~~~~~  147 (283)
T cd05118          77 FEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH--------GILHRDLKPENLLINTEGVLKLADFGLARS  147 (283)
T ss_pred             EeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence            999985 89888865  4789999999999999999999998        999999999999999999999999999876


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ......    ......++..|+|||.+.+..     .++.++|+||||+++|+|+||          +.||....    .
T Consensus       148 ~~~~~~----~~~~~~~~~~~~~PE~~~~~~-----~~~~~~Di~slG~~l~~l~tg----------~~~~~~~~----~  204 (283)
T cd05118         148 FGSPVR----PYTHYVVTRWYRAPELLLGDK-----GYSTPVDIWSVGCIFAELLSR----------RPLFPGKS----E  204 (283)
T ss_pred             cCCCcc----cccCccCcccccCcHHHhcCC-----CCCchhHHHHHHHHHHHHHhC----------CCCCCCCC----H
Confidence            654321    112345788999999986541     456799999999999999999          45554321    1


Q ss_pred             hHHHHhhhhhcC----------------CCCCCCC------CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQ----------------QRPVLPN------RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~----------------~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+..........                .....+.      .......+.++.+++.+||+.||.+||++.+++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         205 IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            111111110000                0000000      0011235678999999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.8e-36  Score=290.20  Aligned_cols=265  Identities=25%  Similarity=0.306  Sum_probs=193.6

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccC-CcccEEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSR-NSCTQLW  210 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~-~~~~~~~  210 (443)
                      +|++.+.||+|+||.||+|..  +++.||||.+.....   .......|+..+..++|+||+++++++.... .....++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            478889999999999999997  478999998865321   1222344566666699999999999987764 2223579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++|||++ ++|.+++.+ ..+++..+..++.|++.||+|||+.        +|+|+||||+|||++.++.++|+|||++.
T Consensus        81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~--------gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA--------NVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            9999998 489988865 4799999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........ ........++..|+|||.+.+..     .++.++|+||||+++|+|++|          ..||.....   
T Consensus       152 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~sDi~slG~il~~l~~g----------~~pf~~~~~---  212 (330)
T cd07834         152 GVDPDEDE-KGFLTEYVVTRWYRAPELLLSSS-----RYTKAIDIWSVGCIFAELLTR----------KPLFPGRDY---  212 (330)
T ss_pred             eecccccc-cccccccccccCcCCceeeeccc-----CCCcchhHHHHHHHHHHHHcC----------CCCcCCCCH---
Confidence            76543211 01123346788999999987652     455799999999999999999          444433210   


Q ss_pred             ChHHHHhhh-----------------------hhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH--
Q psy14889        370 SFDDMRKVI-----------------------CIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT--  424 (443)
Q Consensus       370 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--  424 (443)
                       .+......                       .........+-.......+..+.+++.+||+.||++|||+.++++.  
T Consensus       213 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  291 (330)
T cd07834         213 -IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY  291 (330)
T ss_pred             -HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence             01111110                       0000000000000012245679999999999999999999999984  


Q ss_pred             HHHHhh
Q psy14889        425 LIKLAC  430 (443)
Q Consensus       425 L~~l~~  430 (443)
                      ++.+..
T Consensus       292 ~~~~~~  297 (330)
T cd07834         292 LAQLHD  297 (330)
T ss_pred             HHhhcc
Confidence            655544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-35  Score=290.59  Aligned_cols=262  Identities=21%  Similarity=0.331  Sum_probs=190.8

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +..+|...+.||+|+||.||+|..  +|+.||||++......   ......|+..+..++||||+++++++.....  ..
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence            347899999999999999999987  5899999988643211   1122355666666999999999998865432  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++|+||+.. +|..++. ..+++..+..++.|++.||+|||+.        +++||||||+||+++.++.+||+|||
T Consensus        93 ~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~--------~i~H~dlkp~NIll~~~~~~kL~dfg  162 (342)
T cd07879          93 QDFYLVMPYMQT-DLQKIMG-HPLSEDKVQYLVYQMLCGLKYIHSA--------GIIHRDLKPGNLAVNEDCELKILDFG  162 (342)
T ss_pred             ceEEEEeccccc-CHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEeeCC
Confidence            346999999974 7877653 4689999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.....       .....++..|+|||.+.+..     .++.++|||||||++|||++|          +.||.... 
T Consensus       163 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slGvil~el~~g----------~~pf~~~~-  219 (342)
T cd07879         163 LARHADAE-------MTGYVVTRWYRAPEVILNWM-----HYNQTVDIWSVGCIMAEMLTG----------KTLFKGKD-  219 (342)
T ss_pred             CCcCCCCC-------CCCceeeecccChhhhcCcc-----ccCchHHHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            98654321       12346788999999986531     456799999999999999999          55554421 


Q ss_pred             CCCChHHHHhhhhhc--------------------CCCCCCCCC-CC--CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICID--------------------QQRPVLPNR-WV--SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~-~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ....+.......                    ...+..+.. +.  ....+..+.+++.+||+.||++||++.+++.
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         220 ---YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             ---HHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               111111111100                    000111100 00  0124467899999999999999999999995


Q ss_pred             H--HHHHhhc
Q psy14889        424 T--LIKLACA  431 (443)
Q Consensus       424 ~--L~~l~~~  431 (443)
                      .  ++.+...
T Consensus       297 h~~f~~~~~~  306 (342)
T cd07879         297 HPYFDSFRDA  306 (342)
T ss_pred             Ccchhhcccc
Confidence            4  6666543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=5.6e-35  Score=282.55  Aligned_cols=245  Identities=27%  Similarity=0.394  Sum_probs=185.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +-|...+.||+|+||.||+|..  +++.||+|.+.......    .....|+..+..++|||++++++++.+.    ...
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~   96 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE----HTA   96 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC----CEE
Confidence            3466678899999999999987  68899999886432211    1223456666669999999999998776    357


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+. |+|.+++..  ..+++.++..++.|++.||.|||+.        +++|+||+|+||+++.++.+||+|||+
T Consensus        97 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~--------gi~H~dl~p~nili~~~~~~kL~dfg~  167 (313)
T cd06633          97 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--------NMIHRDIKAGNILLTEPGQVKLADFGS  167 (313)
T ss_pred             EEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCChhhEEECCCCCEEEeecCC
Confidence            99999996 588887743  5689999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.....        .....|+..|+|||++.....   ..++.++||||||+++|||++|          ..||....  
T Consensus       168 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~---~~~~~~sDv~slGvil~el~~g----------~~p~~~~~--  224 (313)
T cd06633         168 ASKSSP--------ANSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAER----------KPPLFNMN--  224 (313)
T ss_pred             CcccCC--------CCCccccccccChhhccccCC---CCCCchhhHHHHHHHHHHHHhC----------CCCCCCCC--
Confidence            853221        123468899999999853211   1456799999999999999999          66665531  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ..........  ...+...    ....+..+.+++.+||+.+|.+||++.+++..
T Consensus       225 --~~~~~~~~~~--~~~~~~~----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         225 --AMSALYHIAQ--NDSPTLQ----SNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             --hHHHHHHHHh--cCCCCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              1122222211  1112211    12344679999999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=3.9e-35  Score=286.37  Aligned_cols=256  Identities=24%  Similarity=0.343  Sum_probs=185.0

Q ss_pred             cccc-ccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---------------hHHHHHHHHHHhccCCCceeeee
Q psy14889        136 KQIS-LSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---------------WSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       136 ~~~~-~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---------------~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      ++|. +.+.||+|+||.||+|..  .++.||||.+.......               .....|+..+..++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            5665 457899999999999987  58899999875432211               11234555666699999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                      ++...    ...++||||+. |+|.+++.. ..+++.....++.|++.||.|||+.        +++|+||+|+||+++.
T Consensus        88 ~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--------~i~H~dl~~~nill~~  154 (335)
T PTZ00024         88 VYVEG----DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW--------YFMHRDLSPANIFINS  154 (335)
T ss_pred             EEecC----CcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecccccHHHeEECC
Confidence            98766    35799999997 699998864 5689999999999999999999998        9999999999999999


Q ss_pred             CCcEEEEecCCcccccccCCc----------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        277 NGTCVIADFGLAVSYSQLSNK----------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      ++.+||+|||++.........          .........++..|+|||.+.+..     .++.++||||||+++|||++
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Dv~slG~~l~el~t  229 (335)
T PTZ00024        155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAE-----KYHFAVDMWSVGCIFAELLT  229 (335)
T ss_pred             CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCC-----CCCcHHHHHHHHHHHHHHHh
Confidence            999999999999765421100          011112335678899999987542     34679999999999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCC------------------CCCCCCCC--CCchhHHHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ------------------RPVLPNRW--VSDSTLNAMTKVMKE  406 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~--~~~~~~~~l~~li~~  406 (443)
                      |          ..||....    ..+.+.........                  ....+...  .....+..+.+++.+
T Consensus       230 g----------~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  295 (335)
T PTZ00024        230 G----------KPLFPGEN----EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQS  295 (335)
T ss_pred             C----------CCCCCCCC----HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHH
Confidence            9          44554321    11111111110000                  00000000  011235678999999


Q ss_pred             HhcCCcCCCCcHHHHHH
Q psy14889        407 CWHQNANVRLSALRVKK  423 (443)
Q Consensus       407 cl~~dP~~Rps~~evl~  423 (443)
                      ||+.||++|||++|++.
T Consensus       296 ~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        296 LLKLNPLERISAKEALK  312 (335)
T ss_pred             HcCCCchhccCHHHHhc
Confidence            99999999999999986

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-35  Score=290.53  Aligned_cols=255  Identities=22%  Similarity=0.336  Sum_probs=188.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|++...||+|+||.||+|..  ++..||||++......   ......|+..+..++||||+++++++.....  ..
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            457899999999999999999998  5789999987543211   1112245666666999999999987765432  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++|+||+ +++|.+++....+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~--------gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA--------GIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEECCCCCEEEcccc
Confidence            3479999998 46999999888899999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++......       .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||.... 
T Consensus       164 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwslGv~l~elltg----------~~pf~~~~-  220 (343)
T cd07851         164 LARHTDDE-------MTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG----------KTLFPGSD-  220 (343)
T ss_pred             cccccccc-------ccCCcccccccCHHHHhCCC-----CCCchHhHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            98765432       12346788999999986532     455799999999999999999          55554321 


Q ss_pred             CCCChHHHHhhhhhcCC--------------------CCCCCC-CC--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQ--------------------RPVLPN-RW--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ..............                    .+.... .+  .....+..+.+++.+||+.||++|||+.+|++
T Consensus       221 ---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         221 ---HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             ---hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence               11111111110000                    000000 00  00123567999999999999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0696|consensus

Probab=100.00  E-value=4.3e-36  Score=279.60  Aligned_cols=238  Identities=23%  Similarity=0.340  Sum_probs=192.3

Q ss_pred             hccccccceeeeecCeEEEEEEEC--CceeEEEEeecc------CccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~------~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..+|.+..+||+|+||.|.+|...  .+.+|||++++.      +.+-...|..++.+. -+-|.+++++..+.+-    
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~-~kppFL~qlHScFQTm----  422 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP-GKPPFLVQLHSCFQTM----  422 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecC-CCCchHHHHHHHhhhh----
Confidence            357899999999999999999885  467999988653      122233466666653 3677889998888776    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .++|+||||+.+|+|--++++ +.+.+..+..++..||-||-|||++        +||.||||..|||+|.+|++||+||
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k--------gIiYRDLKLDNvmLd~eGHiKi~DF  494 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK--------GIIYRDLKLDNVMLDSEGHIKIADF  494 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC--------CeeeeeccccceEeccCCceEeeec
Confidence            458999999999999888876 7899999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.---    ....+.+++||+.|+|||++..+      +|+..+|+|||||+||||+.|          +.||.+. 
T Consensus       495 GmcKEni~----~~~TTkTFCGTPdYiAPEIi~Yq------PYgksvDWWa~GVLLyEmlaG----------QpPFdGe-  553 (683)
T KOG0696|consen  495 GMCKENIF----DGVTTKTFCGTPDYIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAG----------QPPFDGE-  553 (683)
T ss_pred             cccccccc----CCcceeeecCCCcccccceEEec------ccccchhHHHHHHHHHHHHcC----------CCCCCCC-
Confidence            99864221    12234678999999999999877      788899999999999999999          8888774 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                          +.+++.+.+...  ....|     ...+.+...+.+..|...|.+|..
T Consensus       554 ----DE~elF~aI~eh--nvsyP-----KslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  554 ----DEDELFQAIMEH--NVSYP-----KSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             ----CHHHHHHHHHHc--cCcCc-----ccccHHHHHHHHHHhhcCCccccC
Confidence                334444444322  22233     447788999999999999999974

>KOG0603|consensus

Probab=100.00  E-value=1e-35  Score=292.46  Aligned_cols=242  Identities=20%  Similarity=0.287  Sum_probs=194.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..+.|.+...+|.|+|+.|-++..  +++..+||++... ..+...|.++..+. -+||||+++.+.+.+.    .+.|+
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~-~~h~niv~~~~v~~~~----~~~~~  393 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLV-RDHPNIVKSHDVYEDG----KEIYL  393 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhh-cCCCcceeecceecCC----ceeee
Confidence            457788999999999999999987  6889999998665 23334455555553 5899999999999887    56899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE-cCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl-~~~~~~kl~DfGla~~  290 (443)
                      |||++.+|-|.+.+...+.....+..|+.+|+.|+.|||++        |+|||||||+|||+ ++.++++|+|||.++.
T Consensus       394 v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~--------gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  394 VMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ--------GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             eehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc--------CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence            99999999888877665555578888999999999999998        99999999999999 5889999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ....       ..+.+-|..|.|||++...      .|+.++||||||++||+|++|          ..||....    .
T Consensus       466 ~~~~-------~~tp~~t~~y~APEvl~~~------~yt~acD~WSLGvlLy~ML~G----------~tp~~~~P----~  518 (612)
T KOG0603|consen  466 LERS-------CDTPALTLQYVAPEVLAIQ------EYTEACDWWSLGVLLYEMLTG----------RTLFAAHP----A  518 (612)
T ss_pred             Cchh-------hcccchhhcccChhhhccC------CCCcchhhHHHHHHHHHHHhC----------CCccccCC----c
Confidence            7654       1223567899999999865      888999999999999999999          67776532    2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      ..++...+    ..+.+.     ...+...++|+++||+.||.+||++.++...=
T Consensus       519 ~~ei~~~i----~~~~~s-----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~  564 (612)
T KOG0603|consen  519 GIEIHTRI----QMPKFS-----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHP  564 (612)
T ss_pred             hHHHHHhh----cCCccc-----cccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence            23333332    222222     44677899999999999999999999987643

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=3.6e-35  Score=302.74  Aligned_cols=265  Identities=20%  Similarity=0.249  Sum_probs=166.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--C----CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccC--Ccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--H----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSR--NSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~----~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~--~~~  206 (443)
                      .++|.+.+.||+|+||.||+|.+  +    +..||||++.............   +....+.++..++..+....  ...
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~---l~~~~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNER---VRRACPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHH---HHhhchhhHHHHHHhhhcccccccC
Confidence            46899999999999999999998  4    6799999875432211111111   11122333333332221110  112


Q ss_pred             cEEEeeecccCcccHHHHhcccCC---------------------CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTL---------------------NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l---------------------~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      ..+++|+||+.+++|.+++....+                     ....+..++.||+.||.|||+.        +|+||
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~--------gIiHR  279 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST--------GIVHR  279 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC--------CEEeC
Confidence            468999999999999999864322                     1234567999999999999998        99999


Q ss_pred             CCCCCCEEEcC-CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCc----------------CCC
Q psy14889        266 DIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC----------------FES  328 (443)
Q Consensus       266 Dlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~----------------~~~  328 (443)
                      ||||+|||++. ++.+||+|||+|+.+......   ......||+.|+|||.+........                ..+
T Consensus       280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~---~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~  356 (566)
T PLN03225        280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINY---IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL  356 (566)
T ss_pred             cCCHHHEEEeCCCCcEEEEeCCCcccccccccc---CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence            99999999986 579999999999765432221   2244678999999997643321100                123


Q ss_pred             CCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC--------CCCCChHHHHhhhhhcCCCCCCCCCC-CCchhHHH
Q psy14889        329 FKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV--------PMDPSFDDMRKVICIDQQRPVLPNRW-VSDSTLNA  399 (443)
Q Consensus       329 ~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  399 (443)
                      ..++|||||||+||||+++.          .|+....        ............... ...+.....+ ..+.....
T Consensus       357 ~~k~DVwSlGviL~el~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~  425 (566)
T PLN03225        357 PDRFDIYSAGLIFLQMAFPN----------LRSDSNLIQFNRQLKRNDYDLVAWRKLVEP-RASPDLRRGFEVLDLDGGA  425 (566)
T ss_pred             CCCcccHHHHHHHHHHHhCc----------CCCchHHHHHHHHHHhcCCcHHHHHHhhcc-ccchhhhhhhhhccccchH
Confidence            45679999999999999872          2221100        000000111111000 0000000000 00111234


Q ss_pred             HHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        400 MTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       400 l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ..+|+.+||+.||++|||+.++++.
T Consensus       426 ~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        426 GWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhCC
Confidence            5689999999999999999999873

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=275.22  Aligned_cols=250  Identities=27%  Similarity=0.341  Sum_probs=185.1

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |+..+.||+|+||.||+|+.  +++.||+|++....   ........|+..+..++|+||+++++++...    ...++|
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~~v   76 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE----RKLYLV   76 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC----CceEEE
Confidence            45678899999999999998  48999999886543   1122234566666668999999999998876    457999


Q ss_pred             ecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||++ ++|.+++.+.  .+++..+..++.|++.||.|||+.        +|+|+||+|+||++++++.+||+|||+++.
T Consensus        77 ~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~  147 (282)
T cd07829          77 FEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH--------RILHRDLKPQNILINRDGVLKLADFGLARA  147 (282)
T ss_pred             ecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCChheEEEcCCCCEEEecCCcccc
Confidence            99998 5999999764  799999999999999999999998        999999999999999999999999999876


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....++..|+|||.+.+..     .++.++||||||+++|||++|          ..||....    .
T Consensus       148 ~~~~~~~----~~~~~~~~~~~aPE~~~~~~-----~~~~~~Dv~slG~~l~~l~~~----------~~~~~~~~----~  204 (282)
T cd07829         148 FGIPLRT----YTHEVVTLWYRAPEILLGSK-----HYSTAVDIWSVGCIFAEMITG----------KPLFPGDS----E  204 (282)
T ss_pred             cCCCccc----cCccccCcCcCChHHhcCCc-----CCCccccHHHHHHHHHHHHhC----------CCCCCCcc----H
Confidence            5432211    12335677899999986541     456799999999999999999          44543321    0


Q ss_pred             hHHHHhhhh---------------h---cCCCCCCCCCC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVIC---------------I---DQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~---------------~---~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+...+...               .   ....+......   .-...+..+.+++.+||..||++||++.+++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         205 IDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            111111000               0   00000000000   00123567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=270.44  Aligned_cols=233  Identities=25%  Similarity=0.335  Sum_probs=182.4

Q ss_pred             eeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      ||+|+||.||++..  +++.+|+|++......    ......|+..+..++||||+++++.+...    ...++||||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE----EKLYLVLEYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC----CeeEEEEecCC
Confidence            69999999999998  4889999988654322    11234455566669999999999888665    45799999999


Q ss_pred             cccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        218 FGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       218 ~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      +++|.+++... .+++..+..++.|++.||.|||+.        +++|+||+|+||+++.++.++|+|||++........
T Consensus        77 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~--------~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~  148 (250)
T cd05123          77 GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL--------GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS  148 (250)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCcceEEEcCCCcEEEeecCcceecccCCC
Confidence            99999999754 689999999999999999999998        999999999999999999999999999876543221


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                          ......++..|+|||.+.+.      ..+.++|+||||+++||+++|          ..||....     ......
T Consensus       149 ----~~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g----------~~p~~~~~-----~~~~~~  203 (250)
T cd05123         149 ----RTNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTG----------KPPFYAED-----RKEIYE  203 (250)
T ss_pred             ----cccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHC----------CCCCCCCC-----HHHHHH
Confidence                11334678899999998765      456799999999999999999          66775431     122222


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      .+..  ....++     ...+..+.+++++||..||++||++.+
T Consensus       204 ~~~~--~~~~~~-----~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         204 KILK--DPLRFP-----EFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHhc--CCCCCC-----CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            2221  222333     224678999999999999999999944

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1151|consensus

Probab=100.00  E-value=2.7e-36  Score=283.17  Aligned_cols=263  Identities=21%  Similarity=0.270  Sum_probs=197.0

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--------hHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--------WSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--------~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      .+.++|-++.+||+|||+.||+|.+  ..+.||||+-..+....        ...-+|..+.+.|.||.||++|+++.-+
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            3456888999999999999999986  57889999754322111        1112344555569999999999998765


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NG  278 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~  278 (443)
                      ..   .++-|+|||++.+|+-||++ ..+++.++..|+.||+.||.||...      +|+|||-||||.|||+-+   .|
T Consensus       540 td---sFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi------kpPIIHYDLKPgNILLv~GtacG  610 (775)
T KOG1151|consen  540 TD---SFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI------KPPIIHYDLKPGNILLVNGTACG  610 (775)
T ss_pred             cc---cceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc------CCCeeeeccCCccEEEecCcccc
Confidence            43   37899999999999999976 5689999999999999999999988      789999999999999954   46


Q ss_pred             cEEEEecCCcccccccCCcCCC---CCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDI---PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE  355 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~  355 (443)
                      .+||.|||+++.+...+.....   .++...||.+|.+||.+.-+....  ..+.|+||||.||++|..+.|++      
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePP--KIsnKVDVWSvGVIFyQClYGrK------  682 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPP--KISNKVDVWSVGVIFYQCLYGRK------  682 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCC--ccccceeeEeeehhhhhhhccCC------
Confidence            8999999999988876544221   134568999999999997654433  78899999999999999999955      


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                          ||.....   ..+.+..........-.+|.   .+..+.+...+|++||++.-++|....++.
T Consensus       683 ----PFGhnqs---QQdILqeNTIlkAtEVqFP~---KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  683 ----PFGHNQS---QQDILQENTILKATEVQFPP---KPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             ----CCCCchh---HHHHHhhhchhcceeccCCC---CCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence                4443211   11222221111112222332   123567899999999999999998877764

>KOG0662|consensus

Probab=100.00  E-value=1.1e-35  Score=248.58  Aligned_cols=252  Identities=23%  Similarity=0.333  Sum_probs=189.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +|...++||+|.||+||+|+.  +++.||+|.+...+.+   .....+||..++.++|.|||+++++....    ..+.+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd----kkltl   78 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD----KKLTL   78 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC----ceeEE
Confidence            567788999999999999986  5889999988765443   23445778778789999999999987665    45899


Q ss_pred             eecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |+|||.. +|..|..  ++.++.+....++.|+++||.|+|++        ++.||||||.|.||+.+|++|++|||+++
T Consensus        79 vfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh--------nvlhrdlkpqnllin~ngelkladfglar  149 (292)
T KOG0662|consen   79 VFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH--------NVLHRDLKPQNLLINRNGELKLADFGLAR  149 (292)
T ss_pred             eHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh--------hhhhccCCcceEEeccCCcEEecccchhh
Confidence            9999986 8988885  47799999999999999999999999        99999999999999999999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .+.-.....    +..+-|.+|.+|.++.+..     -|++..|+||.||++.|+.....|         -|.+    ..
T Consensus       150 afgipvrcy----saevvtlwyrppdvlfgak-----ly~tsidmwsagcifaelanagrp---------lfpg----~d  207 (292)
T KOG0662|consen  150 AFGIPVRCY----SAEVVTLWYRPPDVLFGAK-----LYSTSIDMWSAGCIFAELANAGRP---------LFPG----ND  207 (292)
T ss_pred             hcCCceEee----eceeeeeeccCcceeeeee-----hhccchHhhhcchHHHHHhhcCCC---------CCCC----Cc
Confidence            776543332    3457789999999998874     456889999999999999865222         1111    11


Q ss_pred             ChHHHHhhhhhcC-----------------CCCCCCCC--CC--CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQ-----------------QRPVLPNR--WV--SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~-----------------~~~~~~~~--~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+.+++...+                 ..|..|..  |.  -+.....-++++++.+.-+|.+|.++++.++
T Consensus       208 vddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  208 VDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            1222222221111                 01111111  00  0112344689999999999999999998765

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=2.3e-34  Score=303.77  Aligned_cols=142  Identities=24%  Similarity=0.337  Sum_probs=122.0

Q ss_pred             ccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|.+.  ++.||||++......    ....+.|+..+..++||||+++++++...    ..+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----~~~   79 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----NNV   79 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC----CEE
Confidence            67999999999999999999984  899999998653321    12234455555668999999999887665    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+.+|+|.+++.. ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        80 ~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~--------gIiHrDLKP~NILl~~~g~vkL~DFGls  151 (669)
T cd05610          80 YLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH--------GIIHRDLKPDNMLISNEGHIKLTDFGLS  151 (669)
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence            999999999999999864 5689999999999999999999998        9999999999999999999999999998


Q ss_pred             c
Q psy14889        289 V  289 (443)
Q Consensus       289 ~  289 (443)
                      +
T Consensus       152 ~  152 (669)
T cd05610         152 K  152 (669)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.1e-34  Score=269.15  Aligned_cols=218  Identities=19%  Similarity=0.231  Sum_probs=167.8

Q ss_pred             ecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHH
Q psy14889        147 GRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH  224 (443)
Q Consensus       147 G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~  224 (443)
                      |.||.||+++.  +++.+|+|.+......  ..  +........||||+++++++...    ...++||||+++|+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--~~--~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--SR--ERLTIIPHCVPNMVCLHKYIVSE----DSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhh--hh--HHHHHHhcCCCceeehhhheecC----CeEEEEEecCCCCCHHHH
Confidence            88999999988  6889999988654321  22  22333336799999999998766    457999999999999998


Q ss_pred             hcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCC
Q psy14889        225 LNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN  303 (443)
Q Consensus       225 l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~  303 (443)
                      +.+ ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.++++|||.+.......       .
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------~  140 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHRE--------GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------D  140 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------c
Confidence            854 5699999999999999999999988        99999999999999999999999999876554321       2


Q ss_pred             CcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCC
Q psy14889        304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ  383 (443)
Q Consensus       304 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~  383 (443)
                      ...++..|+|||.+.+.      .++.++||||+|+++|||++|.          .|+.....      ...     ...
T Consensus       141 ~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g~----------~~~~~~~~------~~~-----~~~  193 (237)
T cd05576         141 GEAVENMYCAPEVGGIS------EETEACDWWSLGAILFELLTGK----------TLVECHPS------GIN-----THT  193 (237)
T ss_pred             cCCcCccccCCcccCCC------CCCchhhHHHHHHHHHHHHHCc----------chhhcCch------hcc-----ccc
Confidence            23456789999988765      5678999999999999999994          33322100      000     001


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        384 RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      ...+|     ...+..+.+++.+||+.||++||++.
T Consensus       194 ~~~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         194 TLNIP-----EWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             ccCCc-----ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            11122     22456799999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4236|consensus

Probab=100.00  E-value=4.6e-35  Score=279.93  Aligned_cols=239  Identities=21%  Similarity=0.345  Sum_probs=188.6

Q ss_pred             cceeeeecCeEEEEEEE--CCceeEEEEeecc---CccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSR---DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~---~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      .++||+|.||+||-|++  +|+.||||++.+-   ..++.....|+.++..++||.||.+...|.+.    ..+++|||-
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~----ervFVVMEK  644 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP----ERVFVVMEK  644 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC----ceEEEEehh
Confidence            47899999999999987  6999999988542   12223334566666669999999999999887    458999999


Q ss_pred             cCcccHHHHh-c--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC---cEEEEecCCcc
Q psy14889        216 HSFGSLYDHL-N--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLAV  289 (443)
Q Consensus       216 ~~~gsL~~~l-~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~  289 (443)
                      +.+ |..+++ .  ++++++.....++.||+.||.|||.+        +|+|+||||+|||+.+..   .+||+|||+|+
T Consensus       645 l~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k--------nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR  715 (888)
T KOG4236|consen  645 LHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK--------NIVHCDLKPENVLLASASPFPQVKLCDFGFAR  715 (888)
T ss_pred             hcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc--------ceeeccCCchheeeccCCCCCceeecccccee
Confidence            875 655554 3  47899999999999999999999998        999999999999997653   79999999999


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .+.+.+..     ...+||+.|.|||+++..      .|...-|+||.||++|--++|          ..||.+...   
T Consensus       716 iIgEksFR-----rsVVGTPAYLaPEVLrnk------GyNrSLDMWSVGVIiYVsLSG----------TFPFNEdEd---  771 (888)
T KOG4236|consen  716 IIGEKSFR-----RSVVGTPAYLAPEVLRNK------GYNRSLDMWSVGVIIYVSLSG----------TFPFNEDED---  771 (888)
T ss_pred             ecchhhhh-----hhhcCCccccCHHHHhhc------cccccccceeeeEEEEEEecc----------cccCCCccc---
Confidence            99875543     456899999999999987      777888999999999999999          778876311   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+++   .....|  +..|  .+++.+..+||...|+..=.+|-|.++.+.
T Consensus       772 IndQIQN---AaFMyP--p~PW--~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  772 INDQIQN---AAFMYP--PNPW--SEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             hhHHhhc---cccccC--CCch--hhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            1122222   222223  3334  346678999999999999999999887654

>KOG1027|consensus

Probab=100.00  E-value=2.6e-35  Score=295.77  Aligned_cols=246  Identities=25%  Similarity=0.370  Sum_probs=187.8

Q ss_pred             cccccceeeeecCe-EEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        137 QISLSECIGKGRYG-EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       137 ~~~~~~~lG~G~fg-~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      -|.-.+++|.|+.| .||+|.+.|+.||||++.........+|...+... =.|||||++++.-.+.    ..+||..|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eS-D~H~NviRyyc~E~d~----qF~YIalEL  584 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQES-DEHPNVIRYYCSEQDR----QFLYIALEL  584 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhc-cCCCceEEEEeeccCC----ceEEEEehH
Confidence            35566889999988 58999999999999988665555556666665554 4899999999886655    678999999


Q ss_pred             cCcccHHHHhccc--CC---CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---C--CcEEEEec
Q psy14889        216 HSFGSLYDHLNRT--TL---NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---N--GTCVIADF  285 (443)
Q Consensus       216 ~~~gsL~~~l~~~--~l---~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~--~~~kl~Df  285 (443)
                      |.- +|.+++...  ..   .......++.|+++||++||+.        +||||||||.||||+.   +  ..++|+||
T Consensus       585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl--------~iVHRDLkPQNILI~~~~~~~~~ra~iSDf  655 (903)
T KOG1027|consen  585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL--------KIVHRDLKPQNILISVPSADGTLRAKISDF  655 (903)
T ss_pred             hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc--------ccccccCCCceEEEEccCCCcceeEEeccc
Confidence            975 999999762  11   1134567889999999999998        9999999999999987   3  47899999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.+......... ..+..||-+|+|||++...      .-+.++||+|+||++|+.++|         +..||.+..
T Consensus       656 glsKkl~~~~sS~~r-~s~~sGt~GW~APE~L~~~------~~~~avDiFslGCvfyYvltg---------G~HpFGd~~  719 (903)
T KOG1027|consen  656 GLSKKLAGGKSSFSR-LSGGSGTSGWQAPEQLRED------RKTQAVDIFSLGCVFYYVLTG---------GSHPFGDSL  719 (903)
T ss_pred             ccccccCCCcchhhc-ccCCCCcccccCHHHHhcc------ccCcccchhhcCceEEEEecC---------CccCCCchH
Confidence            999988876544433 4566899999999999987      444689999999999999998         478887742


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .      .-.+++........+..   ..++  +..+||.+|++.||..||++.+|+.
T Consensus       720 ~------R~~NIl~~~~~L~~L~~---~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  720 E------RQANILTGNYTLVHLEP---LPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             H------hhhhhhcCccceeeecc---CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            1      11122211111111111   1122  7899999999999999999999974

>KOG0607|consensus

Probab=100.00  E-value=3.5e-34  Score=259.20  Aligned_cols=257  Identities=26%  Similarity=0.395  Sum_probs=192.9

Q ss_pred             cceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      .+.||+|+|+.|--++.  +|..+|||++.+...   .+..+|.|++... -.|+||++++++|.+.    ..+|||||-
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C-qgh~nilqLiefFEdd----~~FYLVfEK  157 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC-QGHKNILQLIEFFEDD----TRFYLVFEK  157 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh-cCCccHHHHHHHhccc----ceEEEEEec
Confidence            46899999999998865  899999999866432   2344566666654 4799999999999887    458999999


Q ss_pred             cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC---cEEEEecCCcccc
Q psy14889        216 HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLAVSY  291 (443)
Q Consensus       216 ~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~---~~kl~DfGla~~~  291 (443)
                      |.+|+|..++++ ..+++.++.++..+|+.||.|||.+        ||.||||||+|||-.+..   -+||+||.+...+
T Consensus       158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k--------gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK--------GIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc--------CcccccCCccceeecCCCCcCceeeecccccccc
Confidence            999999998864 6799999999999999999999998        999999999999997765   4799999987543


Q ss_pred             cccCCc---CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        292 SQLSNK---MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       292 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ......   ......+.+|+..|||||+..--... ...|..+.|.||||||||-|+.|          ..||.+.-..+
T Consensus       230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~q-A~~YDKrCDlwSLGvIlYImLsG----------YpPFvG~Cg~d  298 (463)
T KOG0607|consen  230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQ-ATFYDKRCDLWSLGVILYIMLSG----------YPPFVGHCGAD  298 (463)
T ss_pred             ccCCCCCCCCCccccCcccchhhcchhHHhhhccc-cccccccccHHHHHHHHHHHHhC----------CCCccCccCCc
Confidence            321111   11112345899999999987532211 12567899999999999999999          66776654333


Q ss_pred             CCh------HHHHhhh--hhcCCCCCCCCC-CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSF------DDMRKVI--CIDQQRPVLPNR-WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~------~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      -.+      ...++..  .+......+|+. |  ..++.+..+++...+..||.+|.++.++++
T Consensus       299 CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW--ahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  299 CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW--AHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             CCccCCCccHHHHHHHHHHHhccCCcCChhhh--HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            221      1122211  122334445532 3  347788999999999999999999999887

>KOG0984|consensus

Probab=100.00  E-value=4.5e-34  Score=243.97  Aligned_cols=221  Identities=24%  Similarity=0.405  Sum_probs=167.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHH-HhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYST-VLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~-~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.......||+|+||.|-+-++  +|...|+|.+...-..  ..+...|+... .....|.+|+|+|.....    ...|
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re----gdvw  121 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE----GDVW  121 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc----ccEE
Confidence            4556678899999998766555  7999999988654322  12222233222 125689999999987665    4589


Q ss_pred             eeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +.||.|.. ||+.+-+     ...+++..+-+|+..|..||.|||++.       .+||||+||+||||+.+|++|++||
T Consensus       122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL-------~vIHRDvKPsNiLIn~~GqVKiCDF  193 (282)
T KOG0984|consen  122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL-------SVIHRDVKPSNILINYDGQVKICDF  193 (282)
T ss_pred             EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh-------hhhhccCCcceEEEccCCcEEEccc
Confidence            99999986 8877653     367899999999999999999999974       8999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |.+..+.+....     +-..|...|||||.+....+..  .|+.||||||||+++.||.++          ..||..+.
T Consensus       194 GIsG~L~dSiAk-----t~daGCkpYmaPEri~~e~n~~--gY~vksDvWSLGItmiElA~l----------r~PY~~w~  256 (282)
T KOG0984|consen  194 GISGYLVDSIAK-----TMDAGCKPYMAPERINPELNQK--GYSVKSDVWSLGITMIEMAIL----------RFPYESWG  256 (282)
T ss_pred             ccceeehhhhHH-----HHhcCCCccCChhhcCcccCcc--cceeehhhhhhhhhhhhhhhc----------cccccccC
Confidence            999766543222     2235778999999998765543  788899999999999999999          67776653


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCC
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNR  390 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~  390 (443)
                         ..++.+++.+.  ...|.+|..
T Consensus       257 ---tpF~qLkqvVe--ep~P~Lp~~  276 (282)
T KOG0984|consen  257 ---TPFQQLKQVVE--EPSPQLPAD  276 (282)
T ss_pred             ---CHHHHHHHHhc--CCCCCCccc
Confidence               24555666553  344555543

>KOG0614|consensus

Probab=100.00  E-value=1e-34  Score=276.62  Aligned_cols=237  Identities=21%  Similarity=0.322  Sum_probs=193.1

Q ss_pred             ccccccceeeeecCeEEEEEEECCce--eEEEEeeccCccc------hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEAS------WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~--vAvK~~~~~~~~~------~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++++....||-|+||.|-++..+++.  +|+|++++....+      ...|+.|+..  .+.|.||++|-.|.+.    .
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~--~~s~fIvrLYrTfrd~----k  493 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMME--CRSDFIVRLYRTFRDS----K  493 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHh--cCchHHHHHHHHhccc----h
Confidence            45677788999999999999886655  8999886654322      2234555554  7899999999998877    5


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ++|+.||-|-+|.|...|++ +.++..+...++..+..|++|||++        +||.|||||+|++++.+|-+||.|||
T Consensus       494 yvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k--------~iIYRDLKPENllLd~~Gy~KLVDFG  565 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK--------GIIYRDLKPENLLLDNRGYLKLVDFG  565 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc--------CceeccCChhheeeccCCceEEeehh
Confidence            68999999999999999975 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +|+.+......+     +++||+.|.|||++...      ....++|.||||+++|||++|          ..||....+
T Consensus       566 FAKki~~g~KTw-----TFcGTpEYVAPEIILnK------GHD~avDyWaLGIli~ELL~G----------~pPFs~~dp  624 (732)
T KOG0614|consen  566 FAKKIGSGRKTW-----TFCGTPEYVAPEIILNK------GHDRAVDYWALGILIYELLTG----------SPPFSGVDP  624 (732)
T ss_pred             hHHHhccCCcee-----eecCCcccccchhhhcc------CcchhhHHHHHHHHHHHHHcC----------CCCCCCCch
Confidence            999988765544     57999999999999876      445789999999999999999          788887644


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      +.     ..+.+........+|     ..++....+||++....+|.+|..
T Consensus       625 mk-----tYn~ILkGid~i~~P-----r~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  625 MK-----TYNLILKGIDKIEFP-----RRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HH-----HHHHHHhhhhhhhcc-----cccchhHHHHHHHHHhcCcHhhhc
Confidence            32     222222222333344     235677899999999999999985

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1e-32  Score=278.02  Aligned_cols=266  Identities=22%  Similarity=0.312  Sum_probs=177.2

Q ss_pred             hccccccceeeeecCeEEEEEEE------------------CCceeEEEEeeccCcc---ch------------HHHHHH
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW------------------HGENVAVKIFFSRDEA---SW------------SRETEI  181 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~------------------~~~~vAvK~~~~~~~~---~~------------~~e~ei  181 (443)
                      .++|.+.++||+|+||.||+|.+                  .++.||||++......   ++            ....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            57899999999999999999964                  2467999988543211   11            112355


Q ss_pred             HHHHhccCCCc-----eeeeeeccccCC----cccEEEeeecccCcccHHHHhccc------------------------
Q psy14889        182 YSTVLLRHENI-----LGYIGSDMTSRN----SCTQLWLVTHYHSFGSLYDHLNRT------------------------  228 (443)
Q Consensus       182 ~~~~~l~H~nI-----v~l~g~~~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~------------------------  228 (443)
                      .....++|.|+     ++++++|.....    .....+|||||+++|+|.++++..                        
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            55555666654     677787754211    113479999999999999988531                        


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCccc
Q psy14889        229 -TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG  307 (443)
Q Consensus       229 -~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~g  307 (443)
                       .+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++.........   ......+
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~--------~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~g~~  372 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRI--------GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF---NPLYGML  372 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc---CccccCC
Confidence             245677889999999999999998        9999999999999999999999999999755432111   1112245


Q ss_pred             ccCcccccccccccccC----------------cCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        308 TKRYMSPEILDESINMD----------------CFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       308 t~~y~aPE~~~~~~~~~----------------~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      |+.|+|||.+.......                .+....+.||||+||+++||+++..         .||.+........
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l---------~p~~~~~~f~~~~  443 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL---------RPVANIRLFNTEL  443 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC---------CCccchhhhhhHH
Confidence            78999999986432110                0112235799999999999999832         2333221111010


Q ss_pred             H----HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCc---CCCCcHHHHHH
Q psy14889        372 D----DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA---NVRLSALRVKK  423 (443)
Q Consensus       372 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~evl~  423 (443)
                      .    ..............++.   .+..+....+|+.++|..+|   .+|+|+.|+++
T Consensus       444 ~~~~~~~~~~r~~~~~~~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        444 RQYDNDLNRWRMYKGQKYDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             hhccchHHHHHhhcccCCCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            0    01111111111222221   13356779999999999866   68999999985

>KOG0695|consensus

Probab=100.00  E-value=2.5e-33  Score=255.06  Aligned_cols=245  Identities=23%  Similarity=0.317  Sum_probs=190.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc----C-c-cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR----D-E-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~----~-~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|.+..+||+|+|..|..+++  +.+.+|+|++++.    + . +-.+.|..+.... -+||.+|.++.+|.+.    .
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~a-sn~pflvglhscfqte----s  324 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA-SNNPFLVGLHSCFQTE----S  324 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhc-cCCCeEEehhhhhccc----c
Confidence            6899999999999999999987  5788999987542    1 1 1223466666665 5999999999988876    4


Q ss_pred             EEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ++++|.||+++|+|--+++ ++.++++.+..+...|+.||.|||+.        |||.||||..|+|+|..|++||+|+|
T Consensus       325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r--------giiyrdlkldnvlldaeghikltdyg  396 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER--------GIIYRDLKLDNVLLDAEGHIKLTDYG  396 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc--------CeeeeeccccceEEccCCceeecccc
Confidence            6899999999999977765 46799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.--..    ...+++++||+.|+|||++++.      .|+...|+|++||+++||+.|+.|+++.. ...|      
T Consensus       397 mcke~l~~----gd~tstfcgtpnyiapeilrge------eygfsvdwwalgvlmfemmagrspfdivg-m~n~------  459 (593)
T KOG0695|consen  397 MCKEGLGP----GDTTSTFCGTPNYIAPEILRGE------EYGFSVDWWALGVLMFEMMAGRSPFDIVG-MDNP------  459 (593)
T ss_pred             hhhcCCCC----CcccccccCCCcccchhhhccc------ccCceehHHHHHHHHHHHHcCCCCcceec-CCCc------
Confidence            98643222    2234678999999999999987      88899999999999999999966654432 1111      


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      .....+-+.+++...  ...+|     ...+-....+++.-|++||.+|..
T Consensus       460 d~ntedylfqvilek--qirip-----rslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  460 DMNTEDYLFQVILEK--QIRIP-----RSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             ccchhHHHHHHHhhh--ccccc-----ceeehhhHHHHHHhhcCCcHHhcC
Confidence            111222233333222  22233     234456778999999999999974

>KOG0671|consensus

Probab=100.00  E-value=7.9e-34  Score=263.00  Aligned_cols=263  Identities=17%  Similarity=0.214  Sum_probs=186.5

Q ss_pred             HHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccC--CC----ceeeeeeccc
Q psy14889        130 IQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRH--EN----ILGYIGSDMT  201 (443)
Q Consensus       130 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H--~n----Iv~l~g~~~~  201 (443)
                      ....+.++|.+.+.+|+|.||.|-.+..  .+..||||+++.-.........||..+.++.+  ||    +|.+.+++..
T Consensus        83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy  162 (415)
T KOG0671|consen   83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY  162 (415)
T ss_pred             eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence            3445578999999999999999999987  47899999987654444444455655555633  22    6777777765


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-  277 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-  277 (443)
                      .    ++.++|+|.+. -|+.++|..   .+++...+..|+.|++.+++|||+.        +++|-||||+|||+.+. 
T Consensus       163 r----ghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~--------kl~HTDLKPENILfvss~  229 (415)
T KOG0671|consen  163 R----GHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL--------KLTHTDLKPENILFVSSE  229 (415)
T ss_pred             c----CceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc--------ceeecCCChheEEEeccc
Confidence            5    55789999884 499999975   4689999999999999999999999        99999999999999432 


Q ss_pred             -------------------CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHH
Q psy14889        278 -------------------GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG  338 (443)
Q Consensus       278 -------------------~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~G  338 (443)
                                         ..+||+|||.|..-.+..       +..+.|..|.|||++.+-      .++.++||||+|
T Consensus       230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-------s~iVsTRHYRAPEViLgL------GwS~pCDvWSiG  296 (415)
T KOG0671|consen  230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-------STIVSTRHYRAPEVILGL------GWSQPCDVWSIG  296 (415)
T ss_pred             eEEEeccCCccceeccCCCcceEEEecCCcceeccCc-------ceeeeccccCCchheecc------CcCCccCceeee
Confidence                               258999999997655433       345789999999999987      778899999999


Q ss_pred             HHHHHHHhcccCCCcccc-----------cCCCCCCCCCCCCChHHHHhhhhh------------------cCCCCCCCC
Q psy14889        339 LVLWEVCRRTKANGIFEE-----------YKAPYHDLVPMDPSFDDMRKVICI------------------DQQRPVLPN  389 (443)
Q Consensus       339 vvl~elltg~~~~~~~~~-----------~~~P~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~  389 (443)
                      |||+|+.||...+..-+.           +..|..-...  ..   ..+....                  +..+|....
T Consensus       297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r--~~---~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~  371 (415)
T KOG0671|consen  297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKK--TR---KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKY  371 (415)
T ss_pred             eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhh--hh---hHhhhhcccccCccccccccchhhhcCCccHHHH
Confidence            999999999543221110           1111110000  00   0000000                  000110000


Q ss_pred             CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       390 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ....+....++.+|+++||..||.+|+|+.|++.
T Consensus       372 ~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  372 MLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             hccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence            1122445567999999999999999999999875

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=5.7e-32  Score=250.07  Aligned_cols=235  Identities=27%  Similarity=0.370  Sum_probs=181.7

Q ss_pred             cCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHH
Q psy14889        148 RYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD  223 (443)
Q Consensus       148 ~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~  223 (443)
                      +||.||+|..  +|+.+|+|++.......  .....|+.....++|+||+++++.+...    ...++++||+++++|.+
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l~~e~~~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE----DKLYLVMEYCDGGDLFD   76 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC----CEEEEEEeCCCCCCHHH
Confidence            5899999998  46899999986554322  2334555566668999999999998765    45799999999999999


Q ss_pred             HhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCC
Q psy14889        224 HLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP  302 (443)
Q Consensus       224 ~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~  302 (443)
                      ++.... +++..+..++.+++.++.|||+.        +++|+||+|+||++++++.++|+|||.+.......     ..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~  143 (244)
T smart00220       77 LLKKRGRLSEDEARFYARQILSALEYLHSN--------GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LL  143 (244)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHc--------CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----cc
Confidence            997544 89999999999999999999998        99999999999999999999999999997765432     11


Q ss_pred             CCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcC
Q psy14889        303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ  382 (443)
Q Consensus       303 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~  382 (443)
                      ....++..|+|||.+...      .++.++||||||+++|+|++|          ..||....    ............ 
T Consensus       144 ~~~~~~~~~~~pE~~~~~------~~~~~~Di~slG~~l~~l~~~----------~~p~~~~~----~~~~~~~~~~~~-  202 (244)
T smart00220      144 TTFVGTPEYMAPEVLLGK------GYGKAVDVWSLGVILYELLTG----------KPPFPGDD----QLLELFKKIGKP-  202 (244)
T ss_pred             ccccCCcCCCCHHHHccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC----cHHHHHHHHhcc-
Confidence            334678899999998754      566899999999999999999          56665421    222222222111 


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        383 QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .......   ....+.++.+++.+||..+|++||++.++++
T Consensus       203 ~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      203 KPPFPPP---EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCCCccc---cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            1111110   1115568999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0576|consensus

Probab=99.98  E-value=3.2e-33  Score=274.27  Aligned_cols=255  Identities=28%  Similarity=0.413  Sum_probs=200.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH-HHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~-e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ....+|.+.+++|.|+||.|||++.  +++..|||+++....+.+.- ..||..+..-+|||||.++|.+...+    .+
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d----kl   87 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD----KL   87 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc----Cc
Confidence            5567999999999999999999988  68999999987655444333 45666666689999999999988774    47


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+.||||.+|+|++.-+ .+.+++.++..+++..++||+|||+.        +-+|||||-.|||+++.+.+|++|||.+
T Consensus        88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~--------gk~hRdiKGanilltd~gDvklaDfgvs  159 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ--------GKIHRDIKGANILLTDEGDVKLADFGVS  159 (829)
T ss_pred             EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC--------CcccccccccceeecccCceeecccCch
Confidence            99999999999999776 47899999999999999999999998        8899999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+.....+    ...+.||+.|||||+..-....   .|..++|||+.|+...|+-.-          +.|..+..+  
T Consensus       160 aqitati~K----rksfiGtpywmapEvaaverkg---gynqlcdiwa~gitAiel~eL----------qpplfdlhp--  220 (829)
T KOG0576|consen  160 AQITATIAK----RKSFIGTPYWMAPEVAAVERKG---GYNQLCDIWALGITAIELGEL----------QPPLFDLHP--  220 (829)
T ss_pred             hhhhhhhhh----hhcccCCccccchhHHHHHhcc---cccccccccccccchhhhhhc----------CCcccccch--
Confidence            766543332    2457899999999987543332   567899999999999998665          566555433  


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           ++.........+..|.......-.+.+.++++.|+..+|++|||++.++.
T Consensus       221 -----mr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  221 -----MRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -----HHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence                 22222222222222222223344567999999999999999999987653

>KOG0664|consensus

Probab=99.97  E-value=2.1e-32  Score=242.80  Aligned_cols=269  Identities=25%  Similarity=0.325  Sum_probs=191.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCc-ccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNS-CTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~-~~~~  209 (443)
                      .+++..+.||-|+||.||...+  +|+.||+|.+..-..   .....-.|+..+..++|.|++..++...-.... ..++
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            3566678899999999999887  699999998743221   122223556666669999999998876543221 2347


Q ss_pred             EeeecccCcccHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+++|.|.. ||...+ ....++.+.+.-+..||++||.|||+.        +|.||||||.|.|++++-.+||+|||+|
T Consensus       133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA--------~ILHRDIKPGNLLVNSNCvLKICDFGLA  203 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA--------NILHRDIKPGNLLVNSNCILKICDFGLA  203 (449)
T ss_pred             HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc--------chhhccCCCccEEeccCceEEecccccc
Confidence            899999975 888876 457799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC----
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL----  364 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~----  364 (443)
                      +.........   .+..+-|..|.|||++.+.+     .|+.+.||||.||++.||+.++..+..    +.|-+..    
T Consensus       204 Rvee~d~~~h---MTqEVVTQYYRAPEiLMGaR-----hYs~AvDiWSVGCIFaELLgRrILFQA----q~PiqQL~lIt  271 (449)
T KOG0664|consen  204 RTWDQRDRLN---MTHEVVTQYYRAPELLMGAR-----RYTGAVDIWSVGCIFAELLQRKILFQA----AGPIEQLQMII  271 (449)
T ss_pred             cccchhhhhh---hHHHHHHHHhccHHHhhcch-----hhcCccceehhhHHHHHHHhhhhhhhc----cChHHHHHHHH
Confidence            8766543322   24456788999999999875     566899999999999999988654321    1121110    


Q ss_pred             -CCCCCChHHHHhh-------hhhc-CCCCCCCCCC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        365 -VPMDPSFDDMRKV-------ICID-QQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       365 -~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       .-..++.+.++..       +... ...|.++..+   ..+....+...++.+++..||.+|.+..+.+..+
T Consensus       272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence             0112233333321       1111 1112222111   1223445677899999999999999988877643

>KOG0608|consensus

Probab=99.97  E-value=5e-31  Score=257.10  Aligned_cols=242  Identities=24%  Similarity=0.339  Sum_probs=178.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .-|..++.||-|+||+|.++..  +...+|.|.+.+.+.      .....|++|+..  -+.+-||+||-.|.+.++   
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAE--ADn~WVVrLyySFQDkdn---  703 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAE--ADNEWVVRLYYSFQDKDN---  703 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhh--cCCcceEEEEEEeccCCc---
Confidence            4577889999999999999875  567889998765432      234446666666  689999999999998865   


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                       +|+||+|.++||+-.+|-+ +-|.+..+..++.++..|+++.|..        |+|||||||+|||||.+|++||+|||
T Consensus       704 -LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm--------GFIHRDiKPDNILIDrdGHIKLTDFG  774 (1034)
T KOG0608|consen  704 -LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM--------GFIHRDIKPDNILIDRDGHIKLTDFG  774 (1034)
T ss_pred             -eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc--------cceecccCccceEEccCCceeeeecc
Confidence             8999999999999998855 5677888888999999999999988        99999999999999999999999999


Q ss_pred             Ccccccc--cCCc--------CC----------------------------CCCCCcccccCcccccccccccccCcCCC
Q psy14889        287 LAVSYSQ--LSNK--------MD----------------------------IPPNPRVGTKRYMSPEILDESINMDCFES  328 (443)
Q Consensus       287 la~~~~~--~~~~--------~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  328 (443)
                      |+.-+.-  .+..        .+                            ......+||..|+|||++...      .+
T Consensus       775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~------g~  848 (1034)
T KOG0608|consen  775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART------GY  848 (1034)
T ss_pred             ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc------Cc
Confidence            9853321  0000        00                            001234799999999999876      77


Q ss_pred             CCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHh
Q psy14889        329 FKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW  408 (443)
Q Consensus       329 ~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  408 (443)
                      +..+|+||.|||||||+.|          +.||....+.....    +++..+... .++   ...+.+.+..++|.+.+
T Consensus       849 ~q~cdwws~gvil~em~~g----------~~pf~~~tp~~tq~----kv~nw~~~l-~~~---~~~~ls~e~~~li~kLc  910 (1034)
T KOG0608|consen  849 TQLCDWWSVGVILYEMLVG----------QPPFLADTPGETQY----KVINWRNFL-HIP---YQGNLSKEALDLIQKLC  910 (1034)
T ss_pred             cccchhhHhhHHHHHHhhC----------CCCccCCCCCccee----eeeehhhcc-ccc---cccccCHHHHHHHHHHh
Confidence            7899999999999999999          77777655432211    112111111 111   11335566777776643


Q ss_pred             cCCcCCCC
Q psy14889        409 HQNANVRL  416 (443)
Q Consensus       409 ~~dP~~Rp  416 (443)
                       .+++.|.
T Consensus       911 -~sad~RL  917 (1034)
T KOG0608|consen  911 -CSADSRL  917 (1034)
T ss_pred             -cChhhhh
Confidence             3456665

>KOG0668|consensus

Probab=99.97  E-value=4.9e-31  Score=228.66  Aligned_cols=251  Identities=21%  Similarity=0.323  Sum_probs=187.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+++|+|.|++||.|..  +++.++||+++.-......+|..|+.-  |. ||||++++++..++.+  ....||
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~n--L~gg~NIi~L~DiV~Dp~S--ktpaLi  113 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQN--LRGGPNIIKLLDIVKDPES--KTPSLI  113 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHh--ccCCCCeeehhhhhcCccc--cCchhH
Confidence            6899999999999999999985  788999999977665555555555444  65 9999999999887765  457899


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~  291 (443)
                      +||..+-+...+.  ..++...+..++.++++||.|+||.        ||.|||+||.|++||... .++|+|+|+|.+.
T Consensus       114 FE~v~n~Dfk~ly--~tl~d~dIryY~~elLkALdyCHS~--------GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY--PTLTDYDIRYYIYELLKALDYCHSM--------GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             hhhhccccHHHHh--hhhchhhHHHHHHHHHHHHhHHHhc--------CcccccCCcceeeechhhceeeeeecchHhhc
Confidence            9999997776654  4578889999999999999999999        999999999999999765 6899999999877


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......     +-++.+..|.-||++..-.     .|...-|+|||||+|..|+..          +.||..-..   ..
T Consensus       184 Hp~~eY-----nVRVASRyfKGPELLVdy~-----~YDYSLD~WS~GcmlA~miFr----------kepFFhG~d---N~  240 (338)
T KOG0668|consen  184 HPGKEY-----NVRVASRYFKGPELLVDYQ-----MYDYSLDMWSLGCMLASMIFR----------KEPFFHGHD---NY  240 (338)
T ss_pred             CCCcee-----eeeeehhhcCCchheeech-----hccccHHHHHHHHHHHHHHhc----------cCcccCCCC---CH
Confidence            654322     3346777899999997653     344578999999999999998          445443221   22


Q ss_pred             HHHHhhhhhc----------CCCCCCCC------------CCC-------CchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        372 DDMRKVICID----------QQRPVLPN------------RWV-------SDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       372 ~~~~~~~~~~----------~~~~~~~~------------~~~-------~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      +.+.++....          .....+++            .|.       ..-.++++.+++.+.|..|..+|||++|.+
T Consensus       241 DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam  320 (338)
T KOG0668|consen  241 DQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM  320 (338)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence            2221111000          00000110            110       011246789999999999999999999987


Q ss_pred             H
Q psy14889        423 K  423 (443)
Q Consensus       423 ~  423 (443)
                      .
T Consensus       321 ~  321 (338)
T KOG0668|consen  321 A  321 (338)
T ss_pred             c
Confidence            5

>KOG1290|consensus

Probab=99.97  E-value=5.4e-30  Score=243.78  Aligned_cols=141  Identities=21%  Similarity=0.294  Sum_probs=115.8

Q ss_pred             chHHHhhhh-ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-----C---CCceee
Q psy14889        127 PLLIQRTLA-KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-----H---ENILGY  195 (443)
Q Consensus       127 ~~~~~~~~~-~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-----H---~nIv~l  195 (443)
                      |..+...+. .+|.+.++||=|.|++||++.+  ..+.||+|+.+...........||..+.+++     |   .+||+|
T Consensus        68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~L  147 (590)
T KOG1290|consen   68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQL  147 (590)
T ss_pred             eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence            444556666 7899999999999999999988  4678999998765544433444555554432     3   369999


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCE
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI  272 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~Ni  272 (443)
                      ++.|....++..+++||+|++. -+|..++..   +.++...+..|+.||+.||.|||..+       +|||-||||+||
T Consensus       148 lD~FkhsGpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec-------gIIHTDlKPENv  219 (590)
T KOG1290|consen  148 LDHFKHSGPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC-------GIIHTDLKPENV  219 (590)
T ss_pred             eccceecCCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc-------CccccCCCccee
Confidence            9999998888899999999985 488888854   67999999999999999999999986       999999999999


Q ss_pred             EEc
Q psy14889        273 LVK  275 (443)
Q Consensus       273 Ll~  275 (443)
                      |+.
T Consensus       220 Ll~  222 (590)
T KOG1290|consen  220 LLC  222 (590)
T ss_pred             eee
Confidence            994

>KOG1152|consensus

Probab=99.97  E-value=1.5e-30  Score=251.79  Aligned_cols=189  Identities=31%  Similarity=0.494  Sum_probs=156.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC--ccchHH-------HHHHHHHHhcc---CCCceeeeeeccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD--EASWSR-------ETEIYSTVLLR---HENILGYIGSDMT  201 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~--~~~~~~-------e~ei~~~~~l~---H~nIv~l~g~~~~  201 (443)
                      .+|+..+.+|+|+||.|+.|.+  +...|+||.+.+..  .+.|.+       -.||.++..++   |+||++++++|.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            3588999999999999999998  45689999875532  122222       14566666677   9999999999998


Q ss_pred             cCCcccEEEeeeccc-CcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc
Q psy14889        202 SRNSCTQLWLVTHYH-SFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT  279 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~-~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~  279 (443)
                      .+    .+||+||-. ++-||.+++.. ..+++.++..|+.||+.|+++||++        +|||||||-+||.++.+|-
T Consensus       641 dd----~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~--------~ivhrdikdenvivd~~g~  708 (772)
T KOG1152|consen  641 DD----YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ--------GIVHRDIKDENVIVDSNGF  708 (772)
T ss_pred             CC----eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc--------CceecccccccEEEecCCe
Confidence            84    589999974 56789999964 6799999999999999999999999        9999999999999999999


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                      +||+|||.|......      +...++||..|.|||++.+..+.     +..-|||++|++||-++..
T Consensus       709 ~klidfgsaa~~ksg------pfd~f~gtv~~aapevl~g~~y~-----gk~qdiwalgillytivyk  765 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKSG------PFDVFVGTVDYAAPEVLGGEKYL-----GKPQDIWALGILLYTIVYK  765 (772)
T ss_pred             EEEeeccchhhhcCC------CcceeeeeccccchhhhCCCccC-----CCcchhhhhhheeeEEEec
Confidence            999999998654432      23457999999999999987433     3678999999999999887

>KOG1345|consensus

Probab=99.96  E-value=3.3e-30  Score=228.73  Aligned_cols=260  Identities=18%  Similarity=0.317  Sum_probs=191.2

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+.+.|.+.+.||+|.||.+-+++++  .+.+++|.+......  ++.+|...--. .-.|.||+.-|++.....   ..
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~-Ls~H~hIi~tY~vaFqt~---d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFF-LSPHQHIIDTYEVAFQTS---DA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhcccee-eccchhhhHHHHHHhhcC---ce
Confidence            34578999999999999999999994  578999988654433  34444332222 146899998877644332   46


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--CCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfG  286 (443)
                      +.+++||++.|||.+-+...++.+....+++.|+++|+.|+|++        ++||||||.+||||-.  ..++||+|||
T Consensus        97 YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk--------nlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK--------NLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             EEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc--------chhhcccccceEEEecCCccEEEeeecc
Confidence            78999999999999999888999999999999999999999999        9999999999999943  3489999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +.+..+.....       ..-+..|-+||......+. .+...+.+|||.||+++|.++||          ..||+...-
T Consensus       169 ~t~k~g~tV~~-------~~~~~~y~~pe~~~~~~ne-~~~~~ps~D~WqfGIi~f~cltG----------~~PWQka~~  230 (378)
T KOG1345|consen  169 LTRKVGTTVKY-------LEYVNNYHAPELCDTVVNE-KLVVNPSTDIWQFGIIFFYCLTG----------KFPWQKASI  230 (378)
T ss_pred             cccccCceehh-------hhhhcccCCcHHHhhcccc-ceEecccccchheeeeeeeeecC----------CCcchhhhc
Confidence            98654432221       1234578899987654322 23566889999999999999999          667776554


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      .+....+..+...  ...+..|..+  ...++.+.++.++-+..+|++|--..++.++..
T Consensus       231 ~d~~Y~~~~~w~~--rk~~~~P~~F--~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk  286 (378)
T KOG1345|consen  231 MDKPYWEWEQWLK--RKNPALPKKF--NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK  286 (378)
T ss_pred             cCchHHHHHHHhc--ccCccCchhh--cccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence            4444444444432  2334455433  225567889999999999999955555554443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=1.3e-28  Score=221.92  Aligned_cols=207  Identities=32%  Similarity=0.497  Sum_probs=173.0

Q ss_pred             eeeecCeEEEEEEEC--CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcc
Q psy14889        144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFG  219 (443)
Q Consensus       144 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~g  219 (443)
                      ||+|++|.||++...  ++.+++|++......  ......|+..+..+.|++|+++++++...    ...++++||+.++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE----NHLYLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC----CeEEEEEecCCCC
Confidence            689999999999995  899999998765442  23344556666669999999999998775    3579999999999


Q ss_pred             cHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCCcccccccCC
Q psy14889        220 SLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       220 sL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~  296 (443)
                      +|.+++...  .+++..+..++.+++++|.|||+.        +++|+||+|.||+++. ++.++|+|||.+........
T Consensus        77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~  148 (215)
T cd00180          77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN--------GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS  148 (215)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence            999999765  799999999999999999999998        9999999999999999 89999999999976654321


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                          ......+...|++||.+...     ...+.++|+|++|+++++|                                
T Consensus       149 ----~~~~~~~~~~~~~pe~~~~~-----~~~~~~~D~~~lg~~~~~l--------------------------------  187 (215)
T cd00180         149 ----LLKTIVGTPAYMAPEVLLGK-----GYYSEKSDIWSLGVILYEL--------------------------------  187 (215)
T ss_pred             ----hhhcccCCCCccChhHhccc-----CCCCchhhhHHHHHHHHHH--------------------------------
Confidence                11223577889999998664     1445789999999999997                                


Q ss_pred             hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                                           ..+.+++.+|++.||++||++.++++.
T Consensus       188 ---------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ---------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ---------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                 248899999999999999999999865

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0665|consensus

Probab=99.96  E-value=3.2e-30  Score=233.91  Aligned_cols=264  Identities=22%  Similarity=0.269  Sum_probs=183.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCC--cccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~  208 (443)
                      .+|.-.+.+|.|.- .|.-+-+  .++.||+|.+...-   ......-.|...+..++|+||++++.++.-...  ....
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            57777888898887 5555554  58999999764331   122233456666666999999999998864322  2245


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|+|||||. ++|...+. -.++-.++..+..|++.|+.|||+.        +|+||||||+||++..+..+||.|||+|
T Consensus        96 ~y~v~e~m~-~nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~--------~IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   96 VYLVMELMD-ANLCQVIL-MELDHETISYILYQMLCGIKHLHSA--------GIIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             HHHHHHhhh-hHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhc--------ceeecccCcccceecchhheeeccchhh
Confidence            799999997 49988876 5678889999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC----------cccccC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG----------IFEEYK  358 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~----------~~~~~~  358 (443)
                      +.....     ...+..+.|..|.|||++.+.      .+.+.+||||+||++.||++|+..+.          +.+..+
T Consensus       166 r~e~~~-----~~mtpyVvtRyyrapevil~~------~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lg  234 (369)
T KOG0665|consen  166 RTEDTD-----FMMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLG  234 (369)
T ss_pred             cccCcc-----cccCchhheeeccCchheecc------CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhc
Confidence            755432     223556889999999999987      56789999999999999999964321          000111


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcC------CCCCCCCCC-----C-CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQ------QRPVLPNRW-----V-SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .|-....  .......+..+....      ....+|+..     . +......+++++.+||-.||++|.|+++++.
T Consensus       235 tpd~~F~--~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  235 TPDPSFM--KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             CCCHHHH--HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            1100000  000000001110000      000111111     1 1123456899999999999999999999886

>KOG0670|consensus

Probab=99.96  E-value=9.8e-30  Score=243.32  Aligned_cols=199  Identities=23%  Similarity=0.248  Sum_probs=160.7

Q ss_pred             chHHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccC------CCceeeeee
Q psy14889        127 PLLIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ENILGYIGS  198 (443)
Q Consensus       127 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H------~nIv~l~g~  198 (443)
                      ...+.+.+..+|.+....|+|-|++|.+|..  .|..||||++..+..-...-..|+.++.+|+-      -|+++|+-.
T Consensus       423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~  502 (752)
T KOG0670|consen  423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRH  502 (752)
T ss_pred             EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence            3446677788999999999999999999988  58899999997765443333444545544542      378888888


Q ss_pred             ccccCCcccEEEeeecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       199 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      |...    ++++||+|-+.. +|.+.|++    -.|....+..++.|+..||..|-..        +|+|.||||.|||+
T Consensus       503 F~hk----nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c--------~vlHaDIKPDNiLV  569 (752)
T KOG0670|consen  503 FKHK----NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC--------GVLHADIKPDNILV  569 (752)
T ss_pred             hhhc----ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc--------CeeecccCccceEe
Confidence            8776    679999998875 99999964    4688899999999999999999987        99999999999999


Q ss_pred             cCCC-cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccC
Q psy14889        275 KTNG-TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA  350 (443)
Q Consensus       275 ~~~~-~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~  350 (443)
                      ++.. .+||||||.|.......      .+...-+..|.|||++.+-      .|....|+||.||+||||.||+..
T Consensus       570 NE~k~iLKLCDfGSA~~~~ene------itPYLVSRFYRaPEIiLG~------~yd~~iD~WSvgctLYElYtGkIl  634 (752)
T KOG0670|consen  570 NESKNILKLCDFGSASFASENE------ITPYLVSRFYRAPEIILGL------PYDYPIDTWSVGCTLYELYTGKIL  634 (752)
T ss_pred             ccCcceeeeccCcccccccccc------ccHHHHHHhccCcceeecC------cccCCccceeeceeeEEeecccee
Confidence            8764 67999999997665432      1334556789999999987      667789999999999999999753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=9.6e-28  Score=211.97  Aligned_cols=167  Identities=25%  Similarity=0.309  Sum_probs=125.3

Q ss_pred             ccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        219 GSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       219 gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      |||.++++.  ..+++.++..++.||+.||.|||+.        +      ||+|||++.++.+|+  ||+++.....  
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------~------kp~Nil~~~~~~~~~--fG~~~~~~~~--   62 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ--------A------KSGNILLTWDGLLKL--DGSVAFKTPE--   62 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc--------C------CcccEeEcCccceee--ccceEeeccc--
Confidence            789999974  4699999999999999999999988        5      999999999999999  9998765432  


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHh
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK  376 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  376 (443)
                             ...||+.|||||++.+.      .++.++|||||||++|||+||          ..||.......   .....
T Consensus        63 -------~~~g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg----------~~p~~~~~~~~---~~~~~  116 (176)
T smart00750       63 -------QSRVDPYFMAPEVIQGQ------SYTEKADIYSLGITLYEALDY----------ELPYNEERELS---AILEI  116 (176)
T ss_pred             -------cCCCcccccChHHhcCC------CCcchhhHHHHHHHHHHHHhC----------CCCccccchhc---HHHHH
Confidence                   12588999999999876      677899999999999999999          66665432111   12222


Q ss_pred             hhhhcCCCCCCCC-CCCCchhHH--HHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        377 VICIDQQRPVLPN-RWVSDSTLN--AMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       377 ~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ....  ..+..+. .........  ++.+++.+||+.||.+|||+.++++.+..+...
T Consensus       117 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      117 LLNG--MPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             HHHH--hccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence            2111  1111110 011122333  699999999999999999999999998877543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0195|consensus

Probab=99.95  E-value=1.1e-28  Score=219.27  Aligned_cols=249  Identities=28%  Similarity=0.510  Sum_probs=194.7

Q ss_pred             cccccceeeeecCeEEEEEEECCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +..+.-+|.+...|+.|+|+|.|..+++|++.-++-   ....+..|.-.++.+.||||+.++|.|..+.+    +.++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppn----lv~is  266 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPN----LVIIS  266 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCC----ceEee
Confidence            455667889999999999999999999998754321   12233345555555899999999999988744    68999


Q ss_pred             cccCcccHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE--ecCCc
Q psy14889        214 HYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA--DFGLA  288 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~---l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~--DfGla  288 (443)
                      .||+.|||+..|+.+.   .+..++.+++.++|+|++|||+.      +|-|.---|.+..++||++.+++|+  |--++
T Consensus       267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl------ep~ipr~~lns~hvmidedltarismad~kfs  340 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL------EPMIPRFYLNSKHVMIDEDLTARISMADTKFS  340 (448)
T ss_pred             eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc------chhhhhhhcccceEEecchhhhheecccceee
Confidence            9999999999998653   67889999999999999999998      5555556799999999999988874  43322


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..           .....-.+.||+||.+.......   --.++|+|||.+++|||.|+          +.||.++.++ 
T Consensus       341 fq-----------e~gr~y~pawmspealqrkped~---n~raadmwsfaillwel~tr----------evpfadlspm-  395 (448)
T KOG0195|consen  341 FQ-----------EVGRAYSPAWMSPEALQRKPEDL---NIRAADMWSFAILLWELNTR----------EVPFADLSPM-  395 (448)
T ss_pred             ee-----------ccccccCcccCCHHHHhcCchhc---chhhhhHHHHHHHHHHhhcc----------ccccccCCch-
Confidence            11           11223457999999998764431   22578999999999999999          9999998654 


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                          ++--.+..++.++.+|+     ..+..+.+||.-|++.||.+||.++.|+-.|+++.
T Consensus       396 ----ecgmkialeglrv~ipp-----gis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  396 ----ECGMKIALEGLRVHIPP-----GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ----hhhhhhhhccccccCCC-----CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                34445566777887774     35667999999999999999999999999999874

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=3.2e-27  Score=216.13  Aligned_cols=196  Identities=30%  Similarity=0.416  Sum_probs=159.3

Q ss_pred             ccccceeeeecCeEEEEEEEC--CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        138 ISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      |.+.+.||+|++|.||++...  ++.+|+|.+......  ......|+..+..++|+|++++++++...    ...++++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~----~~~~~v~   76 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP----EPLYLVM   76 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC----CceEEEE
Confidence            456789999999999999983  689999988654332  22334556666668999999999998765    3478999


Q ss_pred             cccCcccHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNRTT--LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~--l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+++++|.+++....  +++..+..++.+++.++.|||+.        +++|+||+|.||+++.++.++|+|||++...
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~  148 (225)
T smart00221       77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL--------GIVHRDLKPENILLGMDGLVKLADFGLARFI  148 (225)
T ss_pred             eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEeeCceeeEe
Confidence            9999999999997543  89999999999999999999998        9999999999999999999999999998776


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      ......   ......++..|++||.+...     ..++.++||||||++++||++|          ..||..
T Consensus       149 ~~~~~~---~~~~~~~~~~~~~pe~~~~~-----~~~~~~~Dv~~lG~~~~~l~~g----------~~pf~~  202 (225)
T smart00221      149 HRDLAA---LLKTVKGTPFYLAPEVLLGG-----KGYGEAVDIWSLGVILYELLWG----------PEPFSG  202 (225)
T ss_pred             cCcccc---cccceeccCCcCCHhHhcCC-----CCCCchhhHHHHHHHHHHHHHC----------CCCccc
Confidence            543200   11234677889999998411     1566799999999999999999          777754

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=2.5e-28  Score=263.73  Aligned_cols=199  Identities=16%  Similarity=0.184  Sum_probs=136.0

Q ss_pred             ccC-CCceeeeeeccccC---CcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCC
Q psy14889        187 LRH-ENILGYIGSDMTSR---NSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP  260 (443)
Q Consensus       187 l~H-~nIv~l~g~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~  260 (443)
                      ++| +||+++++++....   .....+++++||+. ++|.++|..  ..+++.+++.++.||++||+|||++        
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------   99 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ--------   99 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC--------
Confidence            456 68888888773222   11124678889875 599999964  4599999999999999999999998        


Q ss_pred             CeEEeCCCCCCEEEcCC-------------------CcEEEEecCCcccccccCCc------------CCCCCCCccccc
Q psy14889        261 AIAHRDIKSKNILVKTN-------------------GTCVIADFGLAVSYSQLSNK------------MDIPPNPRVGTK  309 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~-------------------~~~kl~DfGla~~~~~~~~~------------~~~~~~~~~gt~  309 (443)
                      +|+||||||+||||+..                   +.+|++|||+++........            .........||+
T Consensus       100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  179 (793)
T PLN00181        100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS  179 (793)
T ss_pred             CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence            99999999999999654                   44566666666432210000            000011246889


Q ss_pred             CcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCC
Q psy14889        310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN  389 (443)
Q Consensus       310 ~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (443)
                      .|||||++.+.      .++.++|||||||+||||++|          ..|+...      ...+.... .....+... 
T Consensus       180 ~Y~APE~~~~~------~~~~~sDVwSlGviL~ELl~~----------~~~~~~~------~~~~~~~~-~~~~~~~~~-  235 (793)
T PLN00181        180 WYTSPEEDNGS------SSNCASDVYRLGVLLFELFCP----------VSSREEK------SRTMSSLR-HRVLPPQIL-  235 (793)
T ss_pred             ceEChhhhccC------CCCchhhhhhHHHHHHHHhhC----------CCchhhH------HHHHHHHH-HhhcChhhh-
Confidence            99999998876      677899999999999999998          4444321      01111111 111111110 


Q ss_pred             CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       390 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          . .......++.+||+.||.+|||+.|+++
T Consensus       236 ----~-~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        236 ----L-NWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             ----h-cCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence                1 1234678899999999999999999975

>KOG1167|consensus

Probab=99.95  E-value=2.4e-27  Score=222.87  Aligned_cols=198  Identities=24%  Similarity=0.375  Sum_probs=155.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE-----CCceeEEEEeecc-CccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSR-DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.+.|...++||+|+|++||++.+     ..+.||+|.+... .......|.+++... .-+.||+++.+++...+    
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~-gG~~ni~~~~~~~rnnd----  108 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRL-GGSDNIIKLNGCFRNND----  108 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHh-ccchhhhcchhhhccCC----
Confidence            447789999999999999999976     3578999987543 345566677777664 57899999999887664    


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfG  286 (443)
                      ...+|+||++.-+..++...  ++...+..+++.+..||.++|.+        |||||||||+|+|.+.. +.-.|.|||
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~--l~~~~i~~Yl~~ll~Al~~~h~~--------GIvHRDiKpsNFL~n~~t~rg~LvDFg  178 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS--LSLAEIRWYLRNLLKALAHLHKN--------GIVHRDIKPSNFLYNRRTQRGVLVDFG  178 (418)
T ss_pred             eeEEEecccCccCHHHHHhc--CCHHHHHHHHHHHHHHhhhhhcc--------CccccCCCccccccccccCCceEEech
Confidence            47899999999888888754  66888999999999999999998        99999999999999765 567899999


Q ss_pred             CcccccccC--------------C----cC-------------------C---CCCCCcccccCcccccccccccccCcC
Q psy14889        287 LAVSYSQLS--------------N----KM-------------------D---IPPNPRVGTKRYMSPEILDESINMDCF  326 (443)
Q Consensus       287 la~~~~~~~--------------~----~~-------------------~---~~~~~~~gt~~y~aPE~~~~~~~~~~~  326 (443)
                      +|.......              .    ..                   +   .......||++|.|||++..-.     
T Consensus       179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~-----  253 (418)
T KOG1167|consen  179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP-----  253 (418)
T ss_pred             hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc-----
Confidence            996211100              0    00                   0   0011346999999999997642     


Q ss_pred             CCCCccchHHHHHHHHHHHhcccCC
Q psy14889        327 ESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       327 ~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      ..++++||||.||+++-+++++.|+
T Consensus       254 ~QttaiDiws~GVI~Lslls~~~PF  278 (418)
T KOG1167|consen  254 RQTTAIDIWSAGVILLSLLSRRYPF  278 (418)
T ss_pred             CcCCccceeeccceeehhhcccccc
Confidence            5668999999999999999996543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.6e-25  Score=217.01  Aligned_cols=167  Identities=21%  Similarity=0.218  Sum_probs=125.0

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE---CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCcee-eeeeccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILG-YIGSDMT  201 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~-l~g~~~~  201 (443)
                      ..+..+|.+.+.||+|+||+||+|.+   +++.||||++....      ......+.|+..+..++|+||+. +++.   
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            34557899999999999999999987   46778999864321      11222356666666799999985 5432   


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCC-CCCCEEEcCCCcE
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDI-KSKNILVKTNGTC  280 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDl-k~~NiLl~~~~~~  280 (443)
                           ...++||||+++++|... ..  ..   ...++.|+++||.|||+.        +|+|||| ||+|||++.++.+
T Consensus        91 -----~~~~LVmE~~~G~~L~~~-~~--~~---~~~~~~~i~~aL~~lH~~--------gIiHrDL~KP~NILv~~~~~i  151 (365)
T PRK09188         91 -----GKDGLVRGWTEGVPLHLA-RP--HG---DPAWFRSAHRALRDLHRA--------GITHNDLAKPQNWLMGPDGEA  151 (365)
T ss_pred             -----CCcEEEEEccCCCCHHHh-Cc--cc---hHHHHHHHHHHHHHHHHC--------CCeeCCCCCcceEEEcCCCCE
Confidence                 125899999999999732 21  11   246789999999999998        9999999 9999999999999


Q ss_pred             EEEecCCcccccccCCcCCC----CCCCcccccCcccccccccc
Q psy14889        281 VIADFGLAVSYSQLSNKMDI----PPNPRVGTKRYMSPEILDES  320 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~  320 (443)
                      ||+|||+|+.+.........    ......+++.|+|||++...
T Consensus       152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            99999999877653322111    11345788899999998654

>KOG1164|consensus

Probab=99.91  E-value=8.7e-23  Score=197.81  Aligned_cols=260  Identities=20%  Similarity=0.214  Sum_probs=188.9

Q ss_pred             cccccceeeeecCeEEEEEEECC---ceeEEEEeeccCcc---chHHHHHHHHHHhc--cCCCceeeeeecc-ccCCccc
Q psy14889        137 QISLSECIGKGRYGEVWRGVWHG---ENVAVKIFFSRDEA---SWSRETEIYSTVLL--RHENILGYIGSDM-TSRNSCT  207 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~~---~~vAvK~~~~~~~~---~~~~e~ei~~~~~l--~H~nIv~l~g~~~-~~~~~~~  207 (443)
                      +|.+.+.||+|+||.||.+....   ..+|+|........   ....|..++....-  .-+++..+++... ..    .
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~----~   94 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE----D   94 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC----c
Confidence            79999999999999999999743   46899977553221   34456555555321  1257888888774 32    3


Q ss_pred             EEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-----Cc
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-----GT  279 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-----~~  279 (443)
                      ..++||+.+. .||.++...   +.++..+++.++.|++.+|++||+.        |++||||||.|+++...     ..
T Consensus        95 ~~~iVM~l~G-~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~--------G~iHRDiKp~N~~~g~~~~~~~~~  165 (322)
T KOG1164|consen   95 FNFIVMSLLG-PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK--------GFIHRDIKPENFVVGQSSRSEVRT  165 (322)
T ss_pred             eeEEEEeccC-ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc--------CcccCCcCHHHeeecCCCCcccce
Confidence            5699999874 599997742   5799999999999999999999999        99999999999999865     36


Q ss_pred             EEEEecCCcc--cccccCCcC---CCC-CCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc
Q psy14889        280 CVIADFGLAV--SYSQLSNKM---DIP-PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI  353 (443)
Q Consensus       280 ~kl~DfGla~--~~~~~~~~~---~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~  353 (443)
                      +.|.|||+++  .+.......   ... ...+.||..|+++.+..+.      +.+.+.|+||++.++.|++.|      
T Consensus       166 ~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~------e~~r~DDles~~Y~l~el~~g------  233 (322)
T KOG1164|consen  166 LYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI------EQGRRDDLESLFYMLLELLKG------  233 (322)
T ss_pred             EEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC------ccCCchhhhhHHHHHHHHhcC------
Confidence            8999999998  433222211   111 2345699999999988876      777899999999999999999      


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                          ..||....... ....+.+.........      .....+.++.++...+-..+..++|....+...|+.+....
T Consensus       234 ----~LPW~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  234 ----SLPWEALEMTD-LKSKFEKDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             ----CCCCccccccc-hHHHHHHHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence                67886643211 1122222211111110      11234567888888888899999999999999998877654

>KOG1165|consensus

Probab=99.91  E-value=4.3e-23  Score=188.48  Aligned_cols=265  Identities=21%  Similarity=0.227  Sum_probs=202.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      -.|.+.++||+|+||+++.|+.  +++.||||.-..+.+. ....|-....+. ...++|...+-+....    .+-.||
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL-~g~~GIP~vYYFGqeG----~~NiLV  102 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLL-GGTEGIPQVYYFGQEG----KYNILV  102 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHH-cCCCCCCceeeecccc----chhhhh
Confidence            4799999999999999999985  8999999976444333 334455555543 3668888887665554    344799


Q ss_pred             ecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-----cEEEEec
Q psy14889        213 THYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-----TCVIADF  285 (443)
Q Consensus       213 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-----~~kl~Df  285 (443)
                      +|+. +.||.++..  .+.++..+++.+|.|++.-++|+|++        .+|.|||||+|.||...+     .+.|+||
T Consensus       103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k--------~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF  173 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK--------DLIYRDIKPDNFLIGRPGTKDANVIHIIDF  173 (449)
T ss_pred             hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc--------ceeecccCccceeecCCCCCCCceEEEEec
Confidence            9987 468988875  57899999999999999999999999        899999999999997554     5899999


Q ss_pred             CCcccccccCCcCCCCC---CCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPP---NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |+|+.+.+..++...+.   ....||.+||+--...+.      +.+.+.|.=|+|-++...+.|          ..||.
T Consensus       174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr------EQSRRDDLEaLGHvFmYFLRG----------sLPWQ  237 (449)
T KOG1165|consen  174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR------EQSRRDDLEALGHVFMYFLRG----------SLPWQ  237 (449)
T ss_pred             cchhhhcCccccccCccccccccccceeeeEeeccccc------hhhhhhhHHHhhhhhhhhccC----------CCccc
Confidence            99999887776655543   345799999998877776      667889999999999999999          89999


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      ++... ...+...++ ..  .....|-.-.....|.++..-+...-..+-.+-|..+-+...+..+......
T Consensus       238 GLKA~-tnK~kYeKI-Ge--~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~  305 (449)
T KOG1165|consen  238 GLKAD-TNKEKYEKI-GE--TKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGE  305 (449)
T ss_pred             cccCc-chHHHHHHh-cc--ccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCC
Confidence            87432 122222222 21  1222222222345778899999988899999999999999988888765443

>KOG1163|consensus

Probab=99.91  E-value=1.2e-23  Score=184.20  Aligned_cols=261  Identities=21%  Similarity=0.297  Sum_probs=195.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccC-CCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRH-ENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H-~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..+|.+.++||+|+||.+|.|..  .|+.||||+-..+.. .....|..+...  |+| ..|..+..+..+..    +-.
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~i--L~~g~GiP~i~~y~~e~~----ynv   87 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRI--LQGGVGIPHIRHYGTEKD----YNV   87 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHH--hccCCCCchhhhhccccc----cce
Confidence            36899999999999999999987  799999998755433 345567777777  444 35555555554442    347


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---CcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~~kl~Df  285 (443)
                      +||+.. +.||.++++  ...++..+++-++-|++.-++|+|.+        ++|||||||+|.|..-+   ..+.++||
T Consensus        88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r--------~fiHRDIKPdNFLMGlgrh~~kl~LIDF  158 (341)
T KOG1163|consen   88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR--------NFIHRDIKPDNFLMGLGRHCNKLYLIDF  158 (341)
T ss_pred             eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh--------ccccccCCccceeeccccccceEEEEec
Confidence            999987 469999885  57799999999999999999999999        88999999999999644   46889999


Q ss_pred             CCcccccccCCcCCCC---CCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIP---PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |+|+.+.+..+....+   .....||.+|.+--...+.      +.+.+.|+=|+|.+|...-.|          ..||+
T Consensus       159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~------eqSRRDDmeSvgYvLmYfnrG----------~LPWQ  222 (341)
T KOG1163|consen  159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI------EQSRRDDMESVGYVLMYFNRG----------SLPWQ  222 (341)
T ss_pred             cchhhhccccccccCccccCCccceeeeehhhhhhhhh------hhhhhhhhhhhcceeeeeecC----------CCccc
Confidence            9998877655544433   3456799999987766654      556789999999999988777          89999


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      +...... .....++.   ......+........|.++.-.+..|-..--++-|...-+.+.+.-+-.
T Consensus       223 glka~tk-~QKyEkI~---EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr  286 (341)
T KOG1163|consen  223 GLKAATK-KQKYEKIS---EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR  286 (341)
T ss_pred             ccchhhH-HHHHHHHH---HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence            8754321 11122221   2223333333345577889999999999999999998887777665543

>KOG0590|consensus

Probab=99.91  E-value=6.8e-25  Score=226.07  Aligned_cols=254  Identities=20%  Similarity=0.263  Sum_probs=180.2

Q ss_pred             cccceeeeecCeEEEEEEE--CCceeEEEEeec---cCccchHH----HHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        139 SLSECIGKGRYGEVWRGVW--HGENVAVKIFFS---RDEASWSR----ETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~---~~~~~~~~----e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ....++|.|++|.|+....  ..+..+.|....   ..+.....    -.|......+.|||++..+....+...    .
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~  396 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG----I  396 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc----c
Confidence            4678899999998777655  344445543321   11111111    123333445899999888777766543    2


Q ss_pred             EeeecccCcccHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .-+||||+. ||..++... .++..++-.++.|++.|+.|+|+.        ||.|||||++|++++.++.+||+|||.+
T Consensus       397 ~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~--------GiahrdlK~enll~~~~g~lki~Dfg~~  467 (601)
T KOG0590|consen  397 LQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM--------GLAHRDLKLENLLVTENGILKIIDFGAA  467 (601)
T ss_pred             hhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc--------CceeccCccccEEEecCCceEEeecCcc
Confidence            344999999 999999775 899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+.-............+|+..|+|||.+.+.....     ...||||.|+++..|++|          +.||......+
T Consensus       468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydp-----r~vDiwS~~ii~~~m~~~----------~~~Wk~a~~~~  532 (601)
T KOG0590|consen  468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDP-----RAVDVWSCGIIYICMILG----------RFPWKVAKKSD  532 (601)
T ss_pred             eeeccCcchhhhhhcCcccCCcCcCcccccccccCc-----chhhhhhccceEEEEecC----------CCccccccccc
Confidence            766554443333456678999999999998873322     468999999999999999          55665543333


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+....   ..................+.+.+.+|.++|+.||.+|.|+++|++
T Consensus       533 ~~~~~~~---~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  533 NSFKTNN---YSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cchhhhc---cccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            2210000   000111111111112335677899999999999999999999986

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.90  E-value=4.7e-22  Score=191.17  Aligned_cols=259  Identities=27%  Similarity=0.339  Sum_probs=187.8

Q ss_pred             ccccceeeeecCeEEEEEEECCceeEEEEeeccCcc----chHHHHHHHHHHhccCC-CceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHE-NILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~-nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |.+.+.||.|+||.||++... ..+++|.+......    ......|+.....+.|+ ||+++++.+...    ...+++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~   76 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE----GSLYLV   76 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC----CEEEEE
Confidence            667889999999999999988 88899988654332    22234455555568888 799999998444    236999


Q ss_pred             ecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCC
Q psy14889        213 THYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGL  287 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGl  287 (443)
                      ++|+.++++.+++...    .++......++.|++.++.|+|+.        +++|||+||+||+++..+ .++++|||+
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~--------~~~hrd~kp~nil~~~~~~~~~l~dfg~  148 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK--------GIIHRDIKPENILLDRDGRVVKLIDFGL  148 (384)
T ss_pred             EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence            9999999999877654    699999999999999999999998        899999999999999998 799999999


Q ss_pred             cccccccCCcCC--CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        288 AVSYSQLSNKMD--IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       288 a~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      ++..........  .......||..|+|||.+.+..   ...++...|+||+|++++++++|          ..||....
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~----------~~p~~~~~  215 (384)
T COG0515         149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTG----------LPPFEGEK  215 (384)
T ss_pred             ceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            975554332211  1235568999999999998631   00455789999999999999999          55544321


Q ss_pred             CCCCChHHHHhhhhhcCCC---CCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQR---PVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .. .........+......   ........ ......+.+++..++..+|..|.+..+....
T Consensus       216 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         216 NS-SATSQTLKIILELPTPSLASPLSPSNP-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             cc-ccHHHHHHHHHhcCCcccccccCcccc-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            10 0122333333222211   11110000 1123568899999999999999998887764

>KOG1023|consensus

Probab=99.90  E-value=1.6e-23  Score=206.63  Aligned_cols=222  Identities=22%  Similarity=0.382  Sum_probs=164.4

Q ss_pred             hccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCe-
Q psy14889        186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAI-  262 (443)
Q Consensus       186 ~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~i-  262 (443)
                      .+.|.|+.+++|.+.+.    ...++|.+||..|+|.+.+..  ..+++.-...++++|+.||.|||+.        +| 
T Consensus         3 ~l~h~n~~~f~g~~~~~----~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s--------~i~   70 (484)
T KOG1023|consen    3 QLDHDNLNKFIGASVDG----PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS--------PIG   70 (484)
T ss_pred             ccchhhhhhheeeEecC----CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC--------cce
Confidence            47899999999999988    457899999999999999975  4577888888999999999999987        44 


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccC-cCCCCCccchHHHHHHH
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMD-CFESFKKADIYALGLVL  341 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~sDvwS~Gvvl  341 (443)
                      .|+.|+++|+++|..+.+||+|||+.........  ........-...|.|||.+....... ....+.+.||||||+++
T Consensus        71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~--~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~  148 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE--PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM  148 (484)
T ss_pred             eeeeeccccceeeeeEEEEechhhhccccccccc--ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence            9999999999999999999999999866543100  00011112335799999998753221 01256789999999999


Q ss_pred             HHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       342 ~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      +|++++          +.||......... +++...+......+..|..+...+.++++..++++||..+|.+||++++|
T Consensus       149 ~ei~~r----------~~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i  217 (484)
T KOG1023|consen  149 YEILFR----------SGPFDLRNLVEDP-DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQI  217 (484)
T ss_pred             HHHHhc----------cCccccccccCCh-HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHH
Confidence            999999          6677654322222 23332232223333344333333566679999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q psy14889        422 KKTLIKLACAD  432 (443)
Q Consensus       422 l~~L~~l~~~~  432 (443)
                      ...++.+....
T Consensus       218 ~~~~~~~~~~~  228 (484)
T KOG1023|consen  218 RSKLLTINKGG  228 (484)
T ss_pred             Hhhhhhhcccc
Confidence            99998877643

>KOG4158|consensus

Probab=99.89  E-value=4.5e-23  Score=192.41  Aligned_cols=211  Identities=23%  Similarity=0.305  Sum_probs=152.3

Q ss_pred             ccCCCceeeeeeccccCC-----------------------cccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHH
Q psy14889        187 LRHENILGYIGSDMTSRN-----------------------SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIV  243 (443)
Q Consensus       187 l~H~nIv~l~g~~~~~~~-----------------------~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia  243 (443)
                      -+|||||++.++|.++-.                       ....+|+||.-++. +|.+++-....+.....-++.|++
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHH
Confidence            469999999998865321                       12358999998875 999999888888899999999999


Q ss_pred             HHHHHHHHchhcCCCCCCeEEeCCCCCCEEE--cCCC--cEEEEecCCcccccccCCc--CCCCCCCcccccCccccccc
Q psy14889        244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNG--TCVIADFGLAVSYSQLSNK--MDIPPNPRVGTKRYMSPEIL  317 (443)
Q Consensus       244 ~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl--~~~~--~~kl~DfGla~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~  317 (443)
                      +|+.|||.+        ||.|||+|++|||+  |+|+  .+.|+|||.+---....-.  .........|.-.-||||+.
T Consensus       352 Eav~hL~~h--------gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~  423 (598)
T KOG4158|consen  352 EAVTHLHKH--------GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA  423 (598)
T ss_pred             HHHHHHHHc--------cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence            999999999        99999999999999  4444  5689999987322211111  11111233577788999998


Q ss_pred             ccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhH
Q psy14889        318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTL  397 (443)
Q Consensus       318 ~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (443)
                      ..........-..|+|.|+.|.+.||+++.          ..||.+.-.+..+...     ..+.+.|.+|     +.++
T Consensus       424 ta~PGp~avvny~kAD~WA~GalaYEIfg~----------~NPFY~rGem~L~~r~-----Yqe~qLPalp-----~~vp  483 (598)
T KOG4158|consen  424 TAVPGPNAVVNYEKADTWAAGALAYEIFGR----------SNPFYKRGEMLLDTRT-----YQESQLPALP-----SRVP  483 (598)
T ss_pred             hcCCCCceeeccchhhhhhhhhhHHHHhcc----------CCcccccchheechhh-----hhhhhCCCCc-----ccCC
Confidence            765433222223689999999999999998          7788763211111111     1223445555     4578


Q ss_pred             HHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        398 NAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       398 ~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      ..+++++...|+.||++|+|..-....|+
T Consensus       484 p~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  484 PVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             hHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            88999999999999999999876665554

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.87  E-value=1.8e-22  Score=182.37  Aligned_cols=180  Identities=18%  Similarity=0.099  Sum_probs=134.0

Q ss_pred             hHHHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchH----------HHHHHHHHHhccCCCceeeee
Q psy14889        128 LLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS----------RETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       128 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~----------~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      ......+.++|...++||.|+||.||+...++..+|||++.........          .++|+..+.++.|++|....+
T Consensus        23 ~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d  102 (232)
T PRK10359         23 EIFDDFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLND  102 (232)
T ss_pred             HHHHHHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceE
Confidence            3455667789999999999999999998777889999998654322211          367777777799999999988


Q ss_pred             eccccCCc----ccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEE
Q psy14889        198 SDMTSRNS----CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL  273 (443)
Q Consensus       198 ~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiL  273 (443)
                      ++......    +...+|+|||+++.+|.++..   ++.    ....+++.+|..+|..        |++|||+||+|++
T Consensus       103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---~~~----~~~~~i~~~l~~lH~~--------gi~H~Dikp~Nil  167 (232)
T PRK10359        103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE---ISE----DVKAKIKASIESLHQH--------GMVSGDPHKGNFI  167 (232)
T ss_pred             eeeecccccccccCCeEEEEEEECCccHHHhhh---ccH----HHHHHHHHHHHHHHHc--------CCccCCCChHHEE
Confidence            86644211    234789999999999988742   332    3456999999999999        9999999999999


Q ss_pred             EcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        274 VKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       274 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ++.++ ++|+|||...........                ..++...      .+..++|+||||+++.-..
T Consensus       168 i~~~g-i~liDfg~~~~~~e~~a~----------------d~~vler------~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        168 VSKNG-LRIIDLSGKRCTAQRKAK----------------DRIDLER------HYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EeCCC-EEEEECCCcccccchhhH----------------HHHHHHh------HhcccccccceeEeehHHH
Confidence            99988 999999987544221100                0022222      3336899999999987654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.87  E-value=6.2e-22  Score=176.57  Aligned_cols=136  Identities=20%  Similarity=0.248  Sum_probs=103.9

Q ss_pred             cceeeeecCeEEEEEEE-CCceeEEEEeeccCc---c---------ch---------------HHHHHHHHHHhccCCCc
Q psy14889        141 SECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE---A---------SW---------------SRETEIYSTVLLRHENI  192 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~---~---------~~---------------~~e~ei~~~~~l~H~nI  192 (443)
                      ...||+|+||.||+|.. +|+.||||+++....   .         .+               ..+.|+..+..+.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46799999999999987 699999999865321   0         11               11236666666777766


Q ss_pred             eeeeeeccccCCcccEEEeeecccCcccHHHH-hcccCCCHHHHHHHHHHHHHHHHHH-HHchhcCCCCCCeEEeCCCCC
Q psy14889        193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHL-HTEIFGTQGKPAIAHRDIKSK  270 (443)
Q Consensus       193 v~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~~~~~~iiHrDlk~~  270 (443)
                      .....+...      ..+|||||++++++... +....++...+..++.|++.+|.|+ |+.        +|+||||||+
T Consensus        82 ~~p~~~~~~------~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~--------giiHrDlkP~  147 (190)
T cd05147          82 PCPEPILLK------SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC--------RLVHADLSEY  147 (190)
T ss_pred             CCCcEEEec------CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHH
Confidence            433222111      13799999998877654 4567899999999999999999999 677        9999999999


Q ss_pred             CEEEcCCCcEEEEecCCcccc
Q psy14889        271 NILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       271 NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||++ ++.++|+|||+|...
T Consensus       148 NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         148 NLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HEEEE-CCcEEEEEccccccC
Confidence            99998 578999999998543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.86  E-value=2.7e-21  Score=172.91  Aligned_cols=137  Identities=21%  Similarity=0.236  Sum_probs=106.4

Q ss_pred             cceeeeecCeEEEEEEE-CCceeEEEEeeccCcc---------------------------chHHHHHHHHHHhccCCCc
Q psy14889        141 SECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA---------------------------SWSRETEIYSTVLLRHENI  192 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~---------------------------~~~~e~ei~~~~~l~H~nI  192 (443)
                      ...||+|+||.||+|.. +|+.||||++......                           ....+.|...+..+.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46799999999999987 5999999998654211                           0011345566666888887


Q ss_pred             eeeeeeccccCCcccEEEeeecccCcccHHH-HhcccCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCC
Q psy14889        193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSK  270 (443)
Q Consensus       193 v~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~  270 (443)
                      .....+....      .+|||||++++++.. .+.+..++......++.|++.+|.++|+ .        ||+||||||+
T Consensus        82 ~~p~~~~~~~------~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~--------givHrDlkP~  147 (190)
T cd05145          82 PVPEPILLKK------NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA--------GLVHGDLSEY  147 (190)
T ss_pred             CCceEEEecC------CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC--------CEecCCCChh
Confidence            5443332221      379999999875543 4566678889999999999999999999 7        9999999999


Q ss_pred             CEEEcCCCcEEEEecCCccccc
Q psy14889        271 NILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       271 NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |||++ ++.++|+|||++....
T Consensus       148 NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         148 NILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             hEEEE-CCCEEEEEcccceecC
Confidence            99999 8899999999996554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0603|consensus

Probab=99.85  E-value=5.9e-22  Score=195.68  Aligned_cols=221  Identities=23%  Similarity=0.377  Sum_probs=172.1

Q ss_pred             eeeeecCeEEEEEE-----ECCceeEEEEeeccC-----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        143 CIGKGRYGEVWRGV-----WHGENVAVKIFFSRD-----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~-----~~~~~vAvK~~~~~~-----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .+|+|.||.|+++.     ..|..+|.|++++..     ......|+.+.... -+||.+|++.-.+..+    ..++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~-~~~~f~v~lhyafqt~----~kl~l~   75 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFV-HNTPFLVKLHYAFQTD----GKLYLI   75 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhc-cCCCceeeeeeeeccc----cchhHh
Confidence            37999999999653     246778888765432     22334456665552 2499999998888776    457999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ++|..+|+|...+.+ ..+++.....+...++.|++++|+.        +|+|||+|++||+++.+|++|+.|||+++..
T Consensus        76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l--------~iiyrd~k~enilld~~Ghi~~tdfglske~  147 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL--------GIAYRDYKLENVLLLLEGHIKLTDFGLSKEA  147 (612)
T ss_pred             hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh--------HHHHhcccccceeecccCccccCCchhhhHh
Confidence            999999999998876 4567777788889999999999998        9999999999999999999999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      -....        .+||..|||||++.+.        ...+|.||||++++||+||          ..||..        
T Consensus       148 v~~~~--------~cgt~eymApEI~~gh--------~~a~D~ws~gvl~felltg----------~~pf~~--------  193 (612)
T KOG0603|consen  148 VKEKI--------ACGTYEYRAPEIINGH--------LSAADWWSFGVLAFELLTG----------TLPFGG--------  193 (612)
T ss_pred             Hhhhh--------cccchhhhhhHhhhcc--------CCcccchhhhhhHHHHhhC----------CCCCch--------
Confidence            54321        2799999999999833        2689999999999999999          667765        


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      +.+..+..   ..+..|     ......+.+++..++..+|.+|.-.
T Consensus       194 ~~~~~Il~---~~~~~p-----~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  194 DTMKRILK---AELEMP-----RELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             HHHHHHhh---hccCCc-----hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            33334332   223333     3466789999999999999999855

>PRK10345 hypothetical protein; Provisional

Probab=99.84  E-value=3e-20  Score=167.36  Aligned_cols=138  Identities=16%  Similarity=0.165  Sum_probs=101.7

Q ss_pred             ccceeeeecCeEEEEEEECCceeEEEEeeccCc-cchHHHHHHHHHHhc-----cCCCceeeeeeccccCCcccEEEeee
Q psy14889        140 LSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE-ASWSRETEIYSTVLL-----RHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       140 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l-----~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      -.+.||+|+||.||....++.. +||++..... .......|+..+..+     .||||++++|++.++......+.+|+
T Consensus         6 ~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          6 EQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             CcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            3578999999999962224444 6898765421 112223455555556     68999999999988754323355899


Q ss_pred             cc--cCcccHHHHhcccCCCHHHHHHHHHHHHHHH-HHHHHchhcCCCCCCeEEeCCCCCCEEEcCC----CcEEEEecC
Q psy14889        214 HY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL-VHLHTEIFGTQGKPAIAHRDIKSKNILVKTN----GTCVIADFG  286 (443)
Q Consensus       214 e~--~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL-~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfG  286 (443)
                      ||  +.+|+|.+++.+..+++.  ..++.|++.++ +|||++        +|+||||||+|||++..    ..++|+||+
T Consensus        85 e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~--------~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         85 DFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN--------RIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             cCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC--------CEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            99  558999999987766666  35678888888 999999        99999999999999743    489999954


Q ss_pred             Cc
Q psy14889        287 LA  288 (443)
Q Consensus       287 la  288 (443)
                      .+
T Consensus       155 G~  156 (210)
T PRK10345        155 GE  156 (210)
T ss_pred             CC
Confidence            43

>KOG1240|consensus

Probab=99.83  E-value=2.8e-21  Score=199.99  Aligned_cols=252  Identities=21%  Similarity=0.253  Sum_probs=172.7

Q ss_pred             cccccceeeeecCeEEEEEEECCceeEEEEeeccCcc----chHHH-HHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA----SWSRE-TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~----~~~~e-~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++...+.||++.|=+|.+|+++.-.|+||++.+.+..    .+.++ .++. ...++|||.+.+.-+-.+.    ...||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~----kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD----KAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh----HHHHH
Confidence            6778899999999999999997666999998765532    22222 3333 4448999999987775544    34589


Q ss_pred             eecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |-+|..+ +|+|.+..++ +...+..-|+.|++.||.-+|..        ||+|+|||.+||||+.=+.+.|+||..-+.
T Consensus        99 vRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~--------gVcHGDIKsENILiTSWNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen   99 VRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL--------GVCHGDIKSENILITSWNWLYLTDFASFKP  169 (1431)
T ss_pred             HHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc--------CccccccccceEEEeeechhhhhcccccCC
Confidence            9999986 9999998665 56677788999999999999988        999999999999999999999999976542


Q ss_pred             ccccCCcC---C-CCCCCcccccCccccccccccc-----ccCcCCCCCccchHHHHHHHHHHHhc-ccCCCcccccCCC
Q psy14889        291 YSQLSNKM---D-IPPNPRVGTKRYMSPEILDESI-----NMDCFESFKKADIYALGLVLWEVCRR-TKANGIFEEYKAP  360 (443)
Q Consensus       291 ~~~~~~~~---~-~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~sDvwS~Gvvl~elltg-~~~~~~~~~~~~P  360 (443)
                      ..-.....   . ...+. ..-..|.|||.+....     ..+....+++-||||+||++.||++- +++++......  
T Consensus       170 tYLPeDNPadf~fFFDTS-rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a--  246 (1431)
T KOG1240|consen  170 TYLPEDNPADFTFFFDTS-RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA--  246 (1431)
T ss_pred             ccCCCCCcccceEEEecC-CceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh--
Confidence            21111000   0 00011 1223699999886532     11111367889999999999999875 33332211100  


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      |..  .+....+...+.+         +        ...++.++..|++.||++|.|+++.++.
T Consensus       247 Yr~--~~~~~~e~~Le~I---------e--------d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  247 YRS--GNADDPEQLLEKI---------E--------DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             Hhc--cCccCHHHHHHhC---------c--------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence            000  0001111111111         1        1248999999999999999999999886

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.83  E-value=4.5e-20  Score=171.73  Aligned_cols=238  Identities=18%  Similarity=0.245  Sum_probs=139.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH----HHHHHHHHhcc----------CCCceeeeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR----ETEIYSTVLLR----------HENILGYIGSD  199 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~----e~ei~~~~~l~----------H~nIv~l~g~~  199 (443)
                      ..+...+.||.|+|+.||.+.+  +|+.+|||++..........    +.|......+.          |-.++.-++..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            3566788999999999999999  57999999886543221111    11221111111          11111111111


Q ss_pred             c--------ccCCcccE-----EEeeecccCcccHHHHhcc---c-----CCCHHHHHHHHHHHHHHHHHHHHchhcCCC
Q psy14889        200 M--------TSRNSCTQ-----LWLVTHYHSFGSLYDHLNR---T-----TLNHHQMMKICLSIVNGLVHLHTEIFGTQG  258 (443)
Q Consensus       200 ~--------~~~~~~~~-----~~lv~e~~~~gsL~~~l~~---~-----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~  258 (443)
                      .        ........     .+++|+-+. +||.+++.-   .     .+....++.+..|+++.+++||+.      
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~------  164 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY------  164 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc------
Confidence            0        00000011     366777775 589887631   1     233445567779999999999999      


Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccc--cCcCCCCCccchHH
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN--MDCFESFKKADIYA  336 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~~sDvwS  336 (443)
                        |++|+||||+|++++.+|.++|+||+.....+.....       ...+..|.+||.......  .....++.+.|.|+
T Consensus       165 --GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~  235 (288)
T PF14531_consen  165 --GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ  235 (288)
T ss_dssp             --TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred             --ceEecccceeeEEEcCCCCEEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence              9999999999999999999999999887655432221       133467999997754311  01125678999999


Q ss_pred             HHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCC
Q psy14889        337 LGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR  415 (443)
Q Consensus       337 ~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  415 (443)
                      +|+++|.|+++          ..||....+......             .+..   ..+.++.++.||..+|+.||.+|
T Consensus       236 LG~~ly~lWC~----------~lPf~~~~~~~~~~~-------------~f~~---C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  236 LGITLYSLWCG----------RLPFGLSSPEADPEW-------------DFSR---CRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHHHHS----------S-STCCCGGGSTSGG-------------GGTT---SS---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHHHHc----------cCCCCCCCccccccc-------------cchh---cCCcCHHHHHHHHHHccCCcccC
Confidence            99999999999          555544321111100             0110   11467889999999999999998

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=8.5e-20  Score=161.60  Aligned_cols=183  Identities=17%  Similarity=0.163  Sum_probs=129.5

Q ss_pred             cccceeeeecCeEEEEEEECCceeEEEEeeccCcc-----chHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEEee
Q psy14889        139 SLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA-----SWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~-----~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .....|++|+||+||.+...+..++.+.+......     ....+.|+..+..+. |++|.+++++.        ..+++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------~~~lv   76 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------GRHLD   76 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------CEEEE
Confidence            34678999999999988778888887776543321     113455666666685 47899998861        24899


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCC-CCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDI-KSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDl-k~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||+.+.+|.+.+...      ...++.|++.+|.++|+.        ||+|||| ||+|||++.++.++|+|||+|...
T Consensus        77 meyI~G~~L~~~~~~~------~~~~~~qi~~~L~~lH~~--------GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~  142 (218)
T PRK12274         77 RSYLAGAAMYQRPPRG------DLAYFRAARRLLQQLHRC--------GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRG  142 (218)
T ss_pred             EeeecCccHHhhhhhh------hHHHHHHHHHHHHHHHHC--------cCccCCCCCcceEEEcCCCCEEEEECCCceec
Confidence            9999999987654221      245778999999999999        9999999 799999999999999999999754


Q ss_pred             cccCCc------CCCC---CCCcccccCcccccccccccccCcCCCC-CccchHHHHHHHHHHHhcc
Q psy14889        292 SQLSNK------MDIP---PNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRT  348 (443)
Q Consensus       292 ~~~~~~------~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~-~~sDvwS~Gvvl~elltg~  348 (443)
                      ......      .+..   ..-...++.|++|+.-.--.     ..+ ...+.++-|.-+|.++||+
T Consensus       143 ~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~-----~~~~~~~~w~~~g~~~~~~~~~~  204 (218)
T PRK12274        143 NPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK-----RTSWIRELWFATGKPVYRFVTRR  204 (218)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc-----cchhHHHHHHHhcchHHHHHhcc
Confidence            432210      0000   00112466777777543211     111 4568889999999999994

>KOG1166|consensus

Probab=99.81  E-value=6.2e-19  Score=185.80  Aligned_cols=247  Identities=17%  Similarity=0.261  Sum_probs=176.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhcc---CCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~---H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.|.+...||+|+||+||+|.. +|+.||+|+-+.....++..-.+++..  |+   -+-|..+...+...+.    -+|
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~R--Lk~~~~~~~~~~~~a~~~~~~----S~l  771 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMER--LKPQMLPSIMHISSAHVFQNA----SVL  771 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHh--hchhhhcchHHHHHHHccCCc----cee
Confidence            5788999999999999999987 799999998877666665554444444  33   2334444444443433    379


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-------CCcEEEE
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------NGTCVIA  283 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-------~~~~kl~  283 (443)
                      |+||.+.|+|.++++. +.++|..++.++.|+++-++.||..        +|||+||||+|.||..       ...++|+
T Consensus       772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~--------~IIHgDiKPDNfll~~~~~~~~~~~~l~lI  843 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM--------GIIHGDIKPDNFLLRREICADSDSKGLYLI  843 (974)
T ss_pred             eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc--------ceecccCCcceeEeecccCCCCcccceEEE
Confidence            9999999999999974 5689999999999999999999998        9999999999999943       2468999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||.+..+.-....  ......++|-.+-.+|+..+.      .++...|.|.|.-+++-|+.|+...         +.+
T Consensus       844 DfG~siDm~lfp~~--~~F~~~~~td~f~C~EM~~gr------pWtYq~DyfGlAa~~h~mLFG~y~q---------~~~  906 (974)
T KOG1166|consen  844 DFGRSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGR------PWTYQIDYFGLAATVHVMLFGKYME---------VKN  906 (974)
T ss_pred             ecccceeeeEcCCC--cEEeeeeccccchhHHHhcCC------CCchhhhhHHHHHHHHHHHHHHHHH---------hcC
Confidence            99998654432221  122456788899999999987      7778999999999999999994211         000


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                         ..           .......++..|..    +-..++...+|+.|-..=|...++...|++....
T Consensus       907 ---g~-----------~~~~~~~~~Ry~~~----~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~  956 (974)
T KOG1166|consen  907 ---GS-----------SWMVKTNFPRYWKR----DMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE  956 (974)
T ss_pred             ---Cc-----------ceeccccchhhhhH----HHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence               00           00011112221211    1245666677776666667777777777766543

>smart00090 RIO RIO-like kinase

Probab=99.78  E-value=9.2e-19  Score=161.47  Aligned_cols=138  Identities=22%  Similarity=0.296  Sum_probs=105.0

Q ss_pred             cccccceeeeecCeEEEEEE-E--CCceeEEEEeeccCcc-------------------------chHHHHHHHHHHhcc
Q psy14889        137 QISLSECIGKGRYGEVWRGV-W--HGENVAVKIFFSRDEA-------------------------SWSRETEIYSTVLLR  188 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~-~--~~~~vAvK~~~~~~~~-------------------------~~~~e~ei~~~~~l~  188 (443)
                      -|++.+.||+|+||.||+|. .  +|+.||||++......                         ....+.|+..+..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999998 3  7899999988643210                         011234555555566


Q ss_pred             CCC--ceeeeeeccccCCcccEEEeeecccCcccHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC-eEE
Q psy14889        189 HEN--ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA-IAH  264 (443)
Q Consensus       189 H~n--Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~-iiH  264 (443)
                      +.+  +.++++.   .     ..++||||+++++|.... ....+.......++.|++.+|.+||+.        + ++|
T Consensus       109 ~~~i~~p~~~~~---~-----~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------g~iiH  172 (237)
T smart00090      109 EAGVPVPKPIAW---R-----RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE--------GELVH  172 (237)
T ss_pred             hcCCCCCeeeEe---c-----CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc--------CCEEe
Confidence            532  3344432   1     137999999998887654 445566667789999999999999998        8 999


Q ss_pred             eCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        265 RDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       265 rDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||||+||+++ ++.++|+|||.+...
T Consensus       173 ~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      173 GDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             CCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            99999999999 889999999998543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=3.7e-18  Score=155.30  Aligned_cols=132  Identities=20%  Similarity=0.247  Sum_probs=105.1

Q ss_pred             ceeeeecCeEEEEEEECCceeEEEEeeccCcc---------chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        142 ECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.||+|++|.||+|.+.|..|++|+.......         ....+.|+..+..+.|+||.....++....    ..+++
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv   77 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE----NFIIV   77 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC----CCEEE
Confidence            57999999999999999999999976532211         012234555666688888876666554442    35899


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||+++++|.+++....  + .+..++.+++.+|.++|+.        +++|+|++|.|||++ ++.++|+|||++.
T Consensus        78 ~e~~~G~~L~~~~~~~~--~-~~~~i~~~i~~~l~~lH~~--------~i~H~Dl~p~Nil~~-~~~~~liDf~~a~  142 (211)
T PRK14879         78 MEYIEGEPLKDLINSNG--M-EELELSREIGRLVGKLHSA--------GIIHGDLTTSNMILS-GGKIYLIDFGLAE  142 (211)
T ss_pred             EEEeCCcCHHHHHHhcc--H-HHHHHHHHHHHHHHHHHhC--------CcccCCCCcccEEEE-CCCEEEEECCccc
Confidence            99999999999986532  2 7889999999999999998        999999999999999 7889999999874

>KOG0606|consensus

Probab=99.77  E-value=5.6e-19  Score=182.97  Aligned_cols=209  Identities=25%  Similarity=0.384  Sum_probs=145.5

Q ss_pred             hccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..+|..++.|..|+||.||..+++  .+.+|+|+-+.+                +--+||..+-|.          .+.|
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~----------------lilRnilt~a~n----------pfvv  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN----------------LILRNILTFAGN----------PFVV  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcccccc----------------hhhhccccccCC----------ccee
Confidence            468999999999999999999874  678888643211                011133333221          1333


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                            ||-...++. +.++..        ++.+++|||+.        +|+|||+||+|.+|+.-|++|+.|||+++..
T Consensus       136 ------gDc~tllk~~g~lPvd--------mvla~Eylh~y--------givhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 ------GDCATLLKNIGPLPVD--------MVLAVEYLHSY--------GIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             ------chhhhhcccCCCCcch--------hhHHhHhhccC--------CeecCCCCCCcceeeecccccccchhhhhhh
Confidence                  555555554 233322        27789999998        9999999999999999999999999998653


Q ss_pred             cccCCcC-----------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        292 SQLSNKM-----------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       292 ~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      .......           .......+||+.|+|||++...      .|+..+|+|++|+++||.+.|          ..|
T Consensus       194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq------gygkpvdwwamGiIlyeFLVg----------cvp  257 (1205)
T KOG0606|consen  194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ------GYGKPVDWWAMGIILYEFLVG----------CVP  257 (1205)
T ss_pred             hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhh------ccCCCccHHHHHHHHHHHhee----------eee
Confidence            3211100           1112345899999999999876      788999999999999999999          677


Q ss_pred             CCCCCCCCCChHHHHh-hhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        361 YHDLVPMDPSFDDMRK-VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      |.+..+     +++.. .+..+...+.-     ....+.++++++.+.|+.+|..|.-
T Consensus       258 ffGdtp-----eelfg~visd~i~wpE~-----dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  258 FFGDTP-----EELFGQVISDDIEWPEE-----DEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             ccCCCH-----HHHHhhhhhhhcccccc-----CcCCCHHHHHHHHHHHHhChHhhcc
Confidence            776532     33333 33222222221     1335578999999999999999983

>KOG1033|consensus

Probab=99.76  E-value=1.4e-19  Score=175.61  Aligned_cols=173  Identities=25%  Similarity=0.361  Sum_probs=127.2

Q ss_pred             cEEEeeecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                      .++|+.|++|...+|.++|.+    ...++...+.++.|++.|++|   +        +.+|||+||.||+...+..+||
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k--------~~ihrdlkp~nif~~~d~q~kI  397 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K--------GLIHRDLKPSNIFFSDDDQLKI  397 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c--------cchhhhccccccccccchhhhh
Confidence            358999999999999999964    346778889999999999999   5        8899999999999999999999


Q ss_pred             EecCCcccccccCCcC--CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        283 ADFGLAVSYSQLSNKM--DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      .|||+...........  ....+..+||..||+||.+.+.      .|+.|+||||||++|+||++--         ..+
T Consensus       398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~------~y~~kvdIyaLGlil~EL~~~f---------~T~  462 (516)
T KOG1033|consen  398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ------QYSEKVDIYALGLILAELLIQF---------STQ  462 (516)
T ss_pred             hhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhh------hhhhhcchhhHHHHHHHHHHHh---------ccH
Confidence            9999986655443110  1112455899999999999988      8889999999999999998720         111


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCC-CCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNR-WVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      +..          +...  .+.....+|+. +.+  . ++-+.|+++++...|.+||++.+
T Consensus       463 ~er----------~~t~--~d~r~g~ip~~~~~d--~-p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  463 FER----------IATL--TDIRDGIIPPEFLQD--Y-PEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             HHH----------HHhh--hhhhcCCCChHHhhc--C-cHHHHHHHHhcCCCcccCchHHH
Confidence            111          1111  11122223311 111  1 23568999999999999995444

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.75  E-value=7.1e-18  Score=151.90  Aligned_cols=134  Identities=23%  Similarity=0.223  Sum_probs=102.5

Q ss_pred             ccccceeeeecCeEEEEEEE-CCceeEEEEeeccCcc-----------------------chHHHHHHHHHHhccCCC--
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA-----------------------SWSRETEIYSTVLLRHEN--  191 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~-----------------------~~~~e~ei~~~~~l~H~n--  191 (443)
                      |.+.+.||+|+||.||++.. +|+.||||++......                       ....+.|+..+..+.|++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            77789999999999999988 6999999987543210                       011234555555577774  


Q ss_pred             ceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       192 Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +...++.        ...++||||+++++|......     .....++.+++.++.++|+.        +|+||||||+|
T Consensus        97 v~~~~~~--------~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~--------gi~H~Dl~p~N  155 (198)
T cd05144          97 VPKPIDW--------NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKH--------GIIHGDLSEFN  155 (198)
T ss_pred             CCceeec--------CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHC--------CCCcCCCCccc
Confidence            3444432        124899999999999776431     34567889999999999998        99999999999


Q ss_pred             EEEcCCCcEEEEecCCccccc
Q psy14889        272 ILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~  292 (443)
                      |++++++.++|+|||++....
T Consensus       156 ill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         156 ILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             EEEcCCCcEEEEECCccccCC
Confidence            999999999999999985443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.75  E-value=7.6e-18  Score=151.79  Aligned_cols=129  Identities=20%  Similarity=0.229  Sum_probs=98.3

Q ss_pred             eeeeecCeEEEEEEECCceeEEEEeeccCc--c--c-----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        143 CIGKGRYGEVWRGVWHGENVAVKIFFSRDE--A--S-----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~--~--~-----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .||+|+||.||+|.++|..|++|.......  .  .     ...+.|+..+..++|+++.....++....    ..++||
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv~   76 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD----NKTIVM   76 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC----CCEEEE
Confidence            489999999999999999999998643211  0  0     11234555555577876544433333332    248999


Q ss_pred             cccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++++|.+++.....      .++.+++.+|.+||+.        +++|+|++|.||+++ ++.++++|||++..
T Consensus        77 e~~~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~--------gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        77 EYIEGKPLKDVIEEGND------ELLREIGRLVGKLHKA--------GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEECCccHHHHHhhcHH------HHHHHHHHHHHHHHHC--------CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            99999999998754321      7899999999999998        999999999999999 88999999998743

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.74  E-value=1.3e-17  Score=172.41  Aligned_cols=135  Identities=19%  Similarity=0.258  Sum_probs=106.1

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccC--c---c----chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD--E---A----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~--~---~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..|...+.||+|+||.||+|.+.+..+++|+...+.  .   .    ....+.|+..+..++|++++....++.+..   
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~---  409 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE---  409 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC---
Confidence            345668899999999999999977777776543211  0   0    112235666666689999988776665543   


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                       ..++||||+++++|.+++.       ....++.+++.+|.|||+.        +++||||||+|||+ +++.++|+|||
T Consensus       410 -~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~--------giiHrDlkp~NILl-~~~~~~liDFG  472 (535)
T PRK09605        410 -EKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKA--------GIVHGDLTTSNFIV-RDDRLYLIDFG  472 (535)
T ss_pred             -CCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhC--------CCccCCCChHHEEE-ECCcEEEEeCc
Confidence             2589999999999999875       4577899999999999998        99999999999999 67899999999


Q ss_pred             Cccc
Q psy14889        287 LAVS  290 (443)
Q Consensus       287 la~~  290 (443)
                      +++.
T Consensus       473 la~~  476 (535)
T PRK09605        473 LGKY  476 (535)
T ss_pred             cccc
Confidence            9854

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.68  E-value=9.1e-17  Score=143.23  Aligned_cols=134  Identities=25%  Similarity=0.270  Sum_probs=91.7

Q ss_pred             cceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHH-------------------------HHHHHHHHhccCCC--c
Q psy14889        141 SECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSR-------------------------ETEIYSTVLLRHEN--I  192 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~-------------------------e~ei~~~~~l~H~n--I  192 (443)
                      .+.||+|+||.||+|.. +|+.||||++..........                         +.|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999988 49999999876432211111                         12222222233322  3


Q ss_pred             eeeeeeccccCCcccEEEeeecccCcccHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCC
Q psy14889        193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSK  270 (443)
Q Consensus       193 v~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~  270 (443)
                      .+.++.        ...++||||++++++... +...... .....++.+++.++.++|+ .        +|+|+||||+
T Consensus        82 ~~~~~~--------~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~--------~ivH~Dl~p~  144 (187)
T cd05119          82 PKPIDL--------NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREA--------GLVHGDLSEY  144 (187)
T ss_pred             CceEec--------CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhcc--------CcCcCCCChh
Confidence            333332        124899999998543221 1111111 6678899999999999998 6        9999999999


Q ss_pred             CEEEcCCCcEEEEecCCccccc
Q psy14889        271 NILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       271 NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||+++ ++.++|+|||.+....
T Consensus       145 Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         145 NILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             hEEEE-CCcEEEEECccccccc
Confidence            99999 8999999999985443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.68  E-value=5.4e-16  Score=143.34  Aligned_cols=137  Identities=16%  Similarity=0.186  Sum_probs=103.0

Q ss_pred             cceee-eecCeEEEEEEECCceeEEEEeeccC--------c------cchHHHHHHHHHHhccCCCc--eeeeeeccccC
Q psy14889        141 SECIG-KGRYGEVWRGVWHGENVAVKIFFSRD--------E------ASWSRETEIYSTVLLRHENI--LGYIGSDMTSR  203 (443)
Q Consensus       141 ~~~lG-~G~fg~Vy~~~~~~~~vAvK~~~~~~--------~------~~~~~e~ei~~~~~l~H~nI--v~l~g~~~~~~  203 (443)
                      ...|| .|+.|+||++...+..++||++....        .      .......|+..+..+.|++|  +..+++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            35687 89999999999889999999874321        1      11122345666666888775  66676644332


Q ss_pred             CcccEEEeeecccCc-ccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        204 NSCTQLWLVTHYHSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~-gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                      ......++||||+++ .+|.+++.+..++...    +.+++.+|.+||+.        ||+||||||.|||++.++.++|
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~--------GI~HrDlkp~NILv~~~~~v~L  183 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDA--------GVYHADLNAHNILLDPDGKFWL  183 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHC--------CCCCCCCCchhEEEcCCCCEEE
Confidence            211234699999997 6999998776666543    56899999999999        9999999999999999999999


Q ss_pred             EecCCcc
Q psy14889        283 ADFGLAV  289 (443)
Q Consensus       283 ~DfGla~  289 (443)
                      +|||.+.
T Consensus       184 IDfg~~~  190 (239)
T PRK01723        184 IDFDRGE  190 (239)
T ss_pred             EECCCcc
Confidence            9999874

>KOG1266|consensus

Probab=99.65  E-value=2.9e-16  Score=143.99  Aligned_cols=207  Identities=19%  Similarity=0.263  Sum_probs=138.4

Q ss_pred             HHHHHhccCCCceeeeeeccccCC-cccEEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchh
Q psy14889        181 IYSTVLLRHENILGYIGSDMTSRN-SCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIF  254 (443)
Q Consensus       181 i~~~~~l~H~nIv~l~g~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~  254 (443)
                      ...+.++.|.|||+++.|+.+... ...+..+++|||..|+|..+|++     ..+......+|+.||..||.|||+.  
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~--  195 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC--  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc--
Confidence            334445789999999999887654 33567899999999999999975     4588888899999999999999998  


Q ss_pred             cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccch
Q psy14889        255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI  334 (443)
Q Consensus       255 ~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDv  334 (443)
                          .|+|+|+++..+-|++..++-+|+.--.....-...............|-++|.|||.-...      ..+.++||
T Consensus       196 ----~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~t------n~~~a~dI  265 (458)
T KOG1266|consen  196 ----DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTT------NTTGASDI  265 (458)
T ss_pred             ----CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCccc------ccccchhh
Confidence                78999999999999999998888743211100000000000011122456789999975443      44568999


Q ss_pred             HHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC
Q psy14889        335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV  414 (443)
Q Consensus       335 wS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  414 (443)
                      |+||....||..+...         |-..... ....+.+.+.+.      .+.+        ..-+.++.+|++..|..
T Consensus       266 y~fgmcAlemailEiq---------~tnseS~-~~~ee~ia~~i~------~len--------~lqr~~i~kcl~~eP~~  321 (458)
T KOG1266|consen  266 YKFGMCALEMAILEIQ---------STNSESK-VEVEENIANVII------GLEN--------GLQRGSITKCLEGEPNG  321 (458)
T ss_pred             hhhhHHHHHHHHheec---------cCCCcce-eehhhhhhhhee------eccC--------ccccCcCcccccCCCCC
Confidence            9999999999877211         1111000 000011111110      0111        11356899999999999


Q ss_pred             CCcHHHHHH
Q psy14889        415 RLSALRVKK  423 (443)
Q Consensus       415 Rps~~evl~  423 (443)
                      ||+|.+++-
T Consensus       322 rp~ar~llf  330 (458)
T KOG1266|consen  322 RPDARLLLF  330 (458)
T ss_pred             Ccchhhhhc
Confidence            999998764

>KOG0590|consensus

Probab=99.65  E-value=1.4e-17  Score=171.93  Aligned_cols=253  Identities=25%  Similarity=0.320  Sum_probs=178.1

Q ss_pred             ccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCccchHH---HHHHHHHHhcc-CCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSR---ETEIYSTVLLR-HENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~~~~~~---e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ..|.+.+.||+|+|+.|-....   ....+|+|.+..........   ..|......+. |+|++++++......    .
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~----~   95 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR----S   95 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc----c
Confidence            4677788899999999987765   23456777554332111111   12333333355 999999999877764    4


Q ss_pred             EEeeecccCcccHHHHh-ccc--CCCHHHHHHHHHHHHHHHHHHH-HchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEE
Q psy14889        209 LWLVTHYHSFGSLYDHL-NRT--TLNHHQMMKICLSIVNGLVHLH-TEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIA  283 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l-~~~--~l~~~~~~~i~~qia~gL~yLH-~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~  283 (443)
                      .+++++|..+|++.+.+ ...  ..+......+..|+..|+.|+| ..        ++.|||+||+|.+++..+ ..|++
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~--------~~~h~~ikP~n~~l~~s~~~l~~~  167 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN--------GVTHRDIKPSNSLLDESGSALKIA  167 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc--------ccccCCCCCccchhccCCCcccCC
Confidence            68999999999999988 432  5777888899999999999999 66        999999999999999999 99999


Q ss_pred             ecCCcccccccCCcCCCCCCCccc-ccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVG-TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |||+|..+....+. .......+| ++.|+|||...+..     ...+..|+||.|+++.-+++|          ..||.
T Consensus       168 df~~At~~~~~~g~-~~~~~~~~g~s~~y~a~E~~~~~~-----~~~~~~d~~S~g~~l~~~~~g----------~~p~~  231 (601)
T KOG0590|consen  168 DFGLATAYRNKNGA-ERSLKDRCGSSPPYGAPEHLSGKA-----YRGPSVDVWSLGIVLSAMLTG----------ELPWD  231 (601)
T ss_pred             CchhhccccccCCc-ceeeecccCCCCCCCCcccccchh-----hcCCCcccccccccccccccC----------CCCcc
Confidence            99999776652111 111234567 99999999998742     223689999999999999999          56655


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .....+.....   ...........+    .........+++.+++..+|..|.+.+++..
T Consensus       232 ~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  232 FPSRKDGRYSS---WKSNKGRFTQLP----WNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccccccccee---ecccccccccCc----cccCChhhhhcccccccCCchhccccccccc
Confidence            54332211111   111100000111    1234456888999999999999999887643

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.63  E-value=2.9e-15  Score=127.92  Aligned_cols=133  Identities=21%  Similarity=0.186  Sum_probs=104.6

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccC--CCceeeeeeccccCCcccEEEeeecccCc
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH--ENILGYIGSDMTSRNSCTQLWLVTHYHSF  218 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H--~nIv~l~g~~~~~~~~~~~~~lv~e~~~~  218 (443)
                      .+.||+|.++.||++...+..+++|....... ......|+..+..++|  .++.+++++....    ...++++||+++
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~----~~~~~v~e~~~g   77 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESD----GWSYLLMEWIEG   77 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC----CccEEEEEecCC
Confidence            56799999999999999888999998755432 2223344444444666  5888888876654    346999999998


Q ss_pred             ccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        219 GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       219 gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +++..+      +......++.+++.+|++||...     .++++|+|++|.||+++.++.++++|||.+.
T Consensus        78 ~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~-----~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120          78 ETLDEV------SEEEKEDIAEQLAELLAKLHQLP-----LLVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             eecccC------CHHHHHHHHHHHHHHHHHHhCCC-----ceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence            877654      56677888999999999999751     2379999999999999998999999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.54  E-value=4.1e-13  Score=134.73  Aligned_cols=139  Identities=17%  Similarity=0.170  Sum_probs=92.5

Q ss_pred             ceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHH-----------------------------------------H
Q psy14889        142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRE-----------------------------------------T  179 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e-----------------------------------------~  179 (443)
                      +.||.|++|+||+|++ +|+.||||+.+.........+                                         .
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            6799999999999998 799999998754321111110                                         1


Q ss_pred             HHHHHHh----ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHH-HHHHHHHchh
Q psy14889        180 EIYSTVL----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN-GLVHLHTEIF  254 (443)
Q Consensus       180 ei~~~~~----l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~-gL~yLH~~~~  254 (443)
                      |......    +.|.+-+.+-.++.+..   ...+|||||+++++|.++........ ....++.+++. .+..+|..  
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ia~~~~~~~l~ql~~~--  276 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIPLSDIAALDEAGL-DRKALAENLARSFLNQVLRD--  276 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCcccccHHHHHhcCC-CHHHHHHHHHHHHHHHHHhC--
Confidence            1111111    22333333333332211   23589999999999988764321111 23456666665 46788887  


Q ss_pred             cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       255 ~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                            |++|+|++|.||+++.++.++++|||++..+.
T Consensus       277 ------g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 ------GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ------CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence                  99999999999999999999999999986554

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601|consensus

Probab=99.45  E-value=1.3e-13  Score=136.87  Aligned_cols=248  Identities=22%  Similarity=0.287  Sum_probs=171.2

Q ss_pred             hccccccceeee--ecCeEEEEEEE----CCceeEEEEeecc---CccchHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGK--GRYGEVWRGVW----HGENVAVKIFFSR---DEASWSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~--G~fg~Vy~~~~----~~~~vAvK~~~~~---~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      ...+.+.+.+|.  |.+|.||.+..    ++..+|+|.-+..   .......-.++.....+ .|+|.++.+..+...  
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~--  190 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS--  190 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC--
Confidence            356777888999  99999998876    4778999863221   12223333444443333 589999977777666  


Q ss_pred             cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHH----HHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN----GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-  277 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~----gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-  277 (443)
                        ..+++-+|++. .+|..+...  .-++...++....+...    ||.++|+.        +++|-|+||.||++..+ 
T Consensus       191 --~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~--------~~~~~~~kp~~i~~~~~~  259 (524)
T KOG0601|consen  191 --GILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN--------NIVHDDLKPANIFTTSDW  259 (524)
T ss_pred             --Ccceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC--------cccccccchhheeccccc
Confidence              45789999987 588888764  23677788888888888    99999998        99999999999999999 


Q ss_pred             CcEEEEecCCcccccccCCcCCCCC-CCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPP-NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                      ...+++|||+...+....-...... ....|...|++||...+       .++.++|+||+|.++.|..++...      
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~------  326 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHL------  326 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhccc------
Confidence            7899999999887765432211111 11256778999999886       456899999999999999988321      


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         |-.+.   ...+...++        ..++.++. ......+...+..+++.+|-.|+++..+..
T Consensus       327 ---~~~g~---~~~W~~~r~--------~~ip~e~~-~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  327 ---PSVGK---NSSWSQLRQ--------GYIPLEFC-EGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ---ccCCC---CCCcccccc--------ccCchhhh-cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence               11110   001111111        11222222 123345667999999999999998776543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.44  E-value=4.7e-13  Score=117.14  Aligned_cols=132  Identities=19%  Similarity=0.120  Sum_probs=91.7

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCce-eeeeeccccCCcccEEEeeecccCcc
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL-GYIGSDMTSRNSCTQLWLVTHYHSFG  219 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv-~l~g~~~~~~~~~~~~~lv~e~~~~g  219 (443)
                      .+.|+.|.++.||++...+..+++|+...........+.|...+..+.+.+++ +++.+....      .++||||+++.
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~------~~lv~e~i~G~   76 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPET------GVLITEFIEGS   76 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCC------CeEEEEecCCC
Confidence            35689999999999999999999998754432222334444444445554443 455443211      37999999998


Q ss_pred             cHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        220 SLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       220 sL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++.+.    .   .....++.+++++|+.||+...   ...+++|+|++|.||+++ ++.++++|||.+.
T Consensus        77 ~l~~~----~---~~~~~~~~~l~~~l~~LH~~~~---~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          77 ELLTE----D---FSDPENLEKIAKLLKKLHSSPL---PDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             ccccc----c---ccCHHHHHHHHHHHHHHhCCCC---CCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            87643    1   1123456789999999998711   122469999999999999 6789999999873

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.37  E-value=4e-11  Score=122.02  Aligned_cols=137  Identities=15%  Similarity=0.179  Sum_probs=86.4

Q ss_pred             cccccceeeeecCeEEEEEEE-C-CceeEEEEeeccCccch-------------------------------------HH
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-H-GENVAVKIFFSRDEASW-------------------------------------SR  177 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-~-~~~vAvK~~~~~~~~~~-------------------------------------~~  177 (443)
                      .|+. +.||+|++|+||+|++ + |+.||||+....-....                                     ..
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4665 7899999999999998 4 89999999864321100                                     00


Q ss_pred             H----HHHHHHHh----ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHH--hcccCCC-----HHHHHHHHHHH
Q psy14889        178 E----TEIYSTVL----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH--LNRTTLN-----HHQMMKICLSI  242 (443)
Q Consensus       178 e----~ei~~~~~----l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~--l~~~~l~-----~~~~~~i~~qi  242 (443)
                      |    .|.....+    +.+.+.+.+-.++.+-   +...+|||||+.|+.+.++  +.....+     ...+..++.|+
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            1    11111111    2233333332222211   1335899999999999874  3333332     22233333443


Q ss_pred             HHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----cEEEEecCCccccc
Q psy14889        243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----TCVIADFGLAVSYS  292 (443)
Q Consensus       243 a~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----~~kl~DfGla~~~~  292 (443)
                      .       ..        |++|+|++|.||+++.++    .+++.|||++..++
T Consensus       277 f-------~~--------GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        277 F-------RD--------GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             H-------hC--------CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            3       34        999999999999999988    99999999986554

>KOG0601|consensus

Probab=99.24  E-value=9.8e-12  Score=123.59  Aligned_cols=245  Identities=20%  Similarity=0.189  Sum_probs=166.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCccchHH-----HHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSR-----ETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~~~~~~-----e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ...+|.+...||.|.|+.|+....   ++..+++|.+..........     |.-+... ...|.++++++..+...+. 
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~-l~~~~~~~g~~~~W~~~r~-  340 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAI-LGSHLPSVGKNSSWSQLRQ-  340 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhH-hhcccccCCCCCCcccccc-
Confidence            345788899999999999998765   46788999765432222221     2222222 2568888887776665543 


Q ss_pred             ccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~  283 (443)
                         .|+-.||+.++++..... ...+.+..++++..|++.++.++|+.        .++|+|+||+||++..+ +..++.
T Consensus       341 ---~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~--------~~~~~d~~psni~i~~~~~~~~~~  409 (524)
T KOG0601|consen  341 ---GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK--------LFVHLDVKPSNILISNDGFFSKLG  409 (524)
T ss_pred             ---ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch--------hhhcccccccceeeccchhhhhcc
Confidence               478999999999877663 24578888999999999999999987        89999999999999887 788999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcc-cccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYM-SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |||.+..+.-..       ....+..++. .+|.+...     +.+..+.|++|||..+.|.+++.+         .+..
T Consensus       410 ~~~~~t~~~~~~-------~~~~~~~r~~p~~~~~~e~-----~~~~~~~~~~sl~~~~~e~~~~~~---------ls~~  468 (524)
T KOG0601|consen  410 DFGCWTRLAFSS-------GVFHHIDRLYPIAEILLED-----YPHLSKADIFSLGLSVDEAITGSP---------LSES  468 (524)
T ss_pred             ccccccccceec-------ccccccccccccchhhccc-----cccccccccccccccccccccCcc---------cCcc
Confidence            999985422111       1122333444 24544443     255579999999999999999832         1111


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..        ....+  .....+..+.      ...++..+.+.+...++..||++.++.......
T Consensus       469 ~~--------~~~~i--~~~~~p~~~~------~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  469 GV--------QSLTI--RSGDTPNLPG------LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             cc--------cceee--ecccccCCCc------hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            10        00010  1112233332      236688899999999999999998876655443

>KOG1243|consensus

Probab=99.23  E-value=3e-10  Score=114.33  Aligned_cols=163  Identities=20%  Similarity=0.279  Sum_probs=118.5

Q ss_pred             CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHH
Q psy14889        158 HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMM  236 (443)
Q Consensus       158 ~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~  236 (443)
                      ++.+|.|...+..... ....++.+..++.++||||++++..+...    ..+|||+|-+.  -|..++++.  +...+.
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~----~~~ylvTErV~--Pl~~~lk~l--~~~~v~  107 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEE----GTLYLVTERVR--PLETVLKEL--GKEEVC  107 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhccc----CceEEEeeccc--cHHHHHHHh--HHHHHH
Confidence            6788888877655441 22235667777779999999999988776    45899999875  567777553  366667


Q ss_pred             HHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccc
Q psy14889        237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI  316 (443)
Q Consensus       237 ~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~  316 (443)
                      --+.||+.||.|||..+       +++|++|....|+++..|.-||++|-++....+.....    ....---.|..|+.
T Consensus       108 ~Gl~qIl~AL~FL~~d~-------~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~----~~~~~~~s~~~P~~  176 (690)
T KOG1243|consen  108 LGLFQILAALSFLNDDC-------NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA----KSLYLIESFDDPEE  176 (690)
T ss_pred             HHHHHHHHHHHHHhccC-------CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc----ccchhhhcccChhh
Confidence            77899999999999764       89999999999999999999999998875443322100    00111124566665


Q ss_pred             cccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        317 LDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       317 ~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                      +...        .-..|.|-||++++|++.|
T Consensus       177 ~~~s--------~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  177 IDPS--------EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cCcc--------ccchhhhhHHHHHHHHhCc
Confidence            4321        1246999999999999998

>KOG0606|consensus

Probab=99.23  E-value=4.3e-12  Score=132.54  Aligned_cols=245  Identities=21%  Similarity=0.267  Sum_probs=163.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeecc------CccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~------~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.+.+.+-+-+|.++.++.+.-  .|...++|+....      +-.....+..+.+.  .+||-++...--+....    
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~--p~~P~v~~~~~s~~~rs----  877 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILIT--PRSPAVVRSFPSFPCRS----  877 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcccc--CCCCceecccCCCCCCC----
Confidence            5677778889999999997765  3444555543221      11222223333222  34566665544422222    


Q ss_pred             EEEeeecccCcccHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      -.+|+++|..+++|...|+..+ .+..-.......+..+++|||+.        .+.|+|++|.|.|+..++..+++|||
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~--------~r~h~~~~p~~~l~~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS--------LRKHRDLKPDSLLIAYDGHRPLTDFG  949 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc--------hhhcccccccchhhcccCCcccCccc
Confidence            2689999999999999998744 66666666777888999999987        68999999999999999999999998


Q ss_pred             Cccccccc---------------------CCcCC------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHH
Q psy14889        287 LAVSYSQL---------------------SNKMD------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL  339 (443)
Q Consensus       287 la~~~~~~---------------------~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gv  339 (443)
                      ........                     .....      .......||+.|.+||.+.+.      .....+|+|++|+
T Consensus       950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~------~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen  950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR------RHGSAADWWSSGV 1023 (1205)
T ss_pred             cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc------cCCCcchhhhhhh
Confidence            43221110                     00000      112334799999999999887      5557899999999


Q ss_pred             HHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       340 vl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +++|.++|          ..||....+.    ..+.++...   ....+.  .+...+.+..+++...+..+|.+|..+.
T Consensus      1024 ~l~e~l~g----------~pp~na~tpq----~~f~ni~~~---~~~~p~--g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1024 CLFEVLTG----------IPPFNAETPQ----QIFENILNR---DIPWPE--GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhcC----------CCCCCCcchh----hhhhccccC---CCCCCC--CccccChhhhhhhhhhhccCchhccCcc
Confidence            99999999          5555554322    122222211   111111  1233556789999999999999998776

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.23  E-value=1.9e-10  Score=101.97  Aligned_cols=133  Identities=18%  Similarity=0.244  Sum_probs=92.0

Q ss_pred             ceeeeecCeEEEEEEEC--------CceeEEEEeecc------------Cccch---------H------HHHHHHHHHh
Q psy14889        142 ECIGKGRYGEVWRGVWH--------GENVAVKIFFSR------------DEASW---------S------RETEIYSTVL  186 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~--------~~~vAvK~~~~~------------~~~~~---------~------~e~ei~~~~~  186 (443)
                      ..||.|--+.||.|...        +..+|||+.+..            .+..+         .      .+.|...+.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999763        378999976321            01000         0      1355555554


Q ss_pred             ccC--CCceeeeeeccccCCcccEEEeeecccCcccHH-HHhcccCCCHHHHHHHHHHHHHHHHHH-HHchhcCCCCCCe
Q psy14889        187 LRH--ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLVHL-HTEIFGTQGKPAI  262 (443)
Q Consensus       187 l~H--~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~~~~~~i  262 (443)
                      +..  -++...+++   .     .-+|||||+.++.+. ..+++..++..+...+..+++.+|..| |..        +|
T Consensus        83 l~~~Gv~vP~pi~~---~-----~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~--------gl  146 (197)
T cd05146          83 MQKAGIPCPEVVVL---K-----KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC--------NL  146 (197)
T ss_pred             HHHcCCCCCeEEEe---c-----CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC--------Ce
Confidence            433  344555544   1     127999999765442 234444566667778889999999999 777        99


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+||++.|||++ ++.+.|+|||.+...
T Consensus       147 VHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         147 VHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             ecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            9999999999997 467999999987544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.16  E-value=4.4e-10  Score=102.63  Aligned_cols=145  Identities=15%  Similarity=0.158  Sum_probs=105.2

Q ss_pred             ceeeeecCeEEEEEEECC-ceeEEEEeeccC----ccchHHHHHHHHHHhccC--CCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWHG-ENVAVKIFFSRD----EASWSRETEIYSTVLLRH--ENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~-~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H--~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.|+.|.++.||++...+ +.+++|......    ......|.++...  +.+  .++.+++.+...... ....++|||
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~--l~~~~~~vp~~~~~~~~~~~-~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRA--LAGTGVPVPKVLALCEDPSV-LGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHH--hhCCCCCCCCEEEECCCCCc-cCCceEEEE
Confidence            568999999999998854 899999875432    2334445555444  554  345667766554321 123589999


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcC--------------------------------------
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT--------------------------------------  256 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--------------------------------------  256 (443)
                      |+++.++.+.+....++..+...++.+++++|..||+.....                                      
T Consensus        81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            999998887664456788888999999999999999642110                                      


Q ss_pred             ----------CCCCCeEEeCCCCCCEEEcC--CCcEEEEecCCcc
Q psy14889        257 ----------QGKPAIAHRDIKSKNILVKT--NGTCVIADFGLAV  289 (443)
Q Consensus       257 ----------~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~  289 (443)
                                .....++|+|+.+.||+++.  ++.+.|+||+.+.
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                      01467899999999999998  5678999999773

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741|consensus

Probab=99.12  E-value=2.4e-09  Score=104.72  Aligned_cols=213  Identities=17%  Similarity=0.169  Sum_probs=145.6

Q ss_pred             CeEEEEEEE--CCceeEEEEeeccCccchHH-HHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCc-ccHHHH
Q psy14889        149 YGEVWRGVW--HGENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSF-GSLYDH  224 (443)
Q Consensus       149 fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~-e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~-gsL~~~  224 (443)
                      -.+.|++..  +|..+++|++.......... -.-+...+++.|+|+|.|..++.+.......+.+|++|+++ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            347888876  79999999984433222211 12233444589999999999988554444568999999876 567664


Q ss_pred             h-c---------------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        225 L-N---------------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       225 l-~---------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      - .               ....++..++.++.|+..||.++|+.        |+.-+-|.+.+||++.+.+++|+..|..
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss--------GLAck~L~~~kIlv~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS--------GLACKTLDLKKILVTGKMRIRISGCGIM  440 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc--------CceeecccHhHeEeeCcceEEEecccce
Confidence            3 1               13477899999999999999999999        8888999999999999999999998887


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ..+..+..                  |-+...         .+-|.=.||.+++.|.||+..         -+...    
T Consensus       441 Dvl~~d~~------------------~~le~~---------Qq~D~~~lG~ll~aLAt~~~n---------s~~~d----  480 (655)
T KOG3741|consen  441 DVLQEDPT------------------EPLESQ---------QQNDLRDLGLLLLALATGTEN---------SNRTD----  480 (655)
T ss_pred             eeecCCCC------------------cchhHH---------hhhhHHHHHHHHHHHhhcccc---------ccccc----
Confidence            55443210                  222222         467999999999999999421         11110    


Q ss_pred             CChHHH-HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        369 PSFDDM-RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       369 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                       ..... ...+              ....+.++++++......++++ -+..+++.++
T Consensus       481 -~~~~s~~~~I--------------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~  522 (655)
T KOG3741|consen  481 -STQSSHLTRI--------------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI  522 (655)
T ss_pred             -chHHHHHHHh--------------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence             00111 0111              1234556788888888888876 5666666544

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=1e-09  Score=94.27  Aligned_cols=127  Identities=20%  Similarity=0.218  Sum_probs=87.9

Q ss_pred             ceeeeecCeEEEEEEECCceeEEEEeeccC------c-----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        142 ECIGKGRYGEVWRGVWHGENVAVKIFFSRD------E-----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~------~-----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..+++|+-+.+|.+.+.|..+++|.-.++.      .     .....|+.+.....-.--+...++++.  .++    ..
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~----~~   75 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDN----GL   75 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCC----CE
Confidence            357899999999998888888888542211      1     112234444443322223344444443  322    36


Q ss_pred             eeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |+|||.++-.|.+++...      ...++..|=.-+.-||..        +|+|+||.++||++..+. +.++||||+.
T Consensus        76 I~me~I~G~~lkd~l~~~------~~~~~r~vG~~vg~lH~~--------givHGDLTtsNiIl~~~~-i~~IDfGLg~  139 (204)
T COG3642          76 IVMEYIEGELLKDALEEA------RPDLLREVGRLVGKLHKA--------GIVHGDLTTSNIILSGGR-IYFIDFGLGE  139 (204)
T ss_pred             EEEEEeCChhHHHHHHhc------chHHHHHHHHHHHHHHhc--------CeecCCCccceEEEeCCc-EEEEECCccc
Confidence            999999998888888665      245556666667779988        999999999999997765 9999999984

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.12  E-value=7.3e-09  Score=99.04  Aligned_cols=270  Identities=14%  Similarity=0.143  Sum_probs=162.2

Q ss_pred             ccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeec---cccCCcccEEEeeec
Q psy14889        138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD---MTSRNSCTQLWLVTH  214 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~---~~~~~~~~~~~lv~e  214 (443)
                      +.....||+|+-+.+|-.---+..|| |+.............+.+.. .-.||-+-.-+.+-   ..........-+.|.
T Consensus        13 i~~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~~aqk~a~la~-~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP   90 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAAQAQKVAELAA-TPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP   90 (637)
T ss_pred             cCCCccccCCccceeeecchhhchhh-eeecCCCchHHHHHHHHhcc-CCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence            45567899999999985433233344 76655443332222222211 13455332211110   011111123566777


Q ss_pred             ccCcc-cHHHHhc----c---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        215 YHSFG-SLYDHLN----R---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       215 ~~~~g-sL~~~l~----~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..++- -+..+++    +   ....|.-.+++++.+|.+.+-||..        |.+-+|+.++|+|+++++.+.|.|-.
T Consensus        91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~--------Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248          91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH--------GHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc--------CCcccccCccceeeecCceEEEEccc
Confidence            66542 2233332    1   2478999999999999999999998        88999999999999999999998754


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      .-..-.. ..    .....+|...|.+||.-.-... ....-+...|-|.||+++++++.|         +..||.+...
T Consensus       163 sfqi~~n-g~----~~~cpVg~~eftPPElQ~~~sf-~g~~r~~~hD~FGLavLiF~lL~g---------grHPysGI~~  227 (637)
T COG4248         163 SFQINAN-GT----LHLCPVGVSEFTPPELQTLPSF-VGFERTANHDNFGLAVLIFHLLFG---------GRHPYSGIPL  227 (637)
T ss_pred             ceeeccC-Cc----eEecccCccccCCHHHhccccc-cccCCCccccchhHHHHHHHHHhc---------CCCCCCcccc
Confidence            3221111 11    1123478899999997653322 123556789999999999999987         3556655432


Q ss_pred             CCCCh---H-HHH-hh--hhhcCCCCC--CCCCCCCchhHHHHHHHHHHHhcC--CcCCCCcHHHHHHHHHHHhhcc
Q psy14889        367 MDPSF---D-DMR-KV--ICIDQQRPV--LPNRWVSDSTLNAMTKVMKECWHQ--NANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       367 ~~~~~---~-~~~-~~--~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~--dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      .....   + .+. ..  ...+..++.  .|..|.-.-.+..+..|..+|+..  ++.-|||++.-+..|.++.++.
T Consensus       228 ~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         228 ISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             cCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence            21111   1 111 10  111122222  222333344567789999999964  3678999999999999887764

>KOG3087|consensus

Probab=99.02  E-value=4.2e-09  Score=90.14  Aligned_cols=138  Identities=22%  Similarity=0.258  Sum_probs=91.1

Q ss_pred             ccceeeeecCeEEEEEEECCceeEEEEeeccC-c-----cc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        140 LSECIGKGRYGEVWRGVWHGENVAVKIFFSRD-E-----AS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       140 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-~-----~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ....|-+|+-+.|+++.+.|+...||.-..+. .     ..   ..-..|+..+.+++--.|..-.-++.+....    .
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~----~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG----Q   86 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC----e
Confidence            46789999999999999999999999543221 0     01   1112344443333222222211122233222    6


Q ss_pred             eeecccCc-ccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC---cEEEE
Q psy14889        211 LVTHYHSF-GSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIA  283 (443)
Q Consensus       211 lv~e~~~~-gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~---~~kl~  283 (443)
                      |+|||.++ .++.+++..   ..........++..|-..+.-||.+        +|||+||..+||++..++   .+.++
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n--------diiHGDLTTSNill~~~~~~~~~~lI  158 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN--------DIIHGDLTTSNILLRSDGNQITPILI  158 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC--------CeecccccccceEEecCCCcCceEEE
Confidence            89999975 477888753   2223333367888888889999999        999999999999997665   45899


Q ss_pred             ecCCcc
Q psy14889        284 DFGLAV  289 (443)
Q Consensus       284 DfGla~  289 (443)
                      |||++.
T Consensus       159 dfgls~  164 (229)
T KOG3087|consen  159 DFGLSS  164 (229)
T ss_pred             eecchh
Confidence            999973

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.00  E-value=1.1e-08  Score=95.84  Aligned_cols=139  Identities=12%  Similarity=0.039  Sum_probs=91.2

Q ss_pred             eeeeecCeEEEEEEECCceeEEEEeeccCcc------------chHHHHHHHHHHhccCCC--ceeeeeeccccC-Cccc
Q psy14889        143 CIGKGRYGEVWRGVWHGENVAVKIFFSRDEA------------SWSRETEIYSTVLLRHEN--ILGYIGSDMTSR-NSCT  207 (443)
Q Consensus       143 ~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~------------~~~~e~ei~~~~~l~H~n--Iv~l~g~~~~~~-~~~~  207 (443)
                      .+-+-....|++..+.|+.+.||........            ......|...+..+...+  ....+++..... ....
T Consensus        29 ~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~  108 (268)
T PRK15123         29 VFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR  108 (268)
T ss_pred             EEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence            3443344457788889999999976432211            001223333333232222  222333332211 1113


Q ss_pred             EEEeeecccCcc-cHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-------
Q psy14889        208 QLWLVTHYHSFG-SLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------  276 (443)
Q Consensus       208 ~~~lv~e~~~~g-sL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-------  276 (443)
                      .-+||||++++- +|.+++.+   ...+......++.+++..+.-||..        ||+|+|++++|||++.       
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~--------Gi~HgDL~~~NiLl~~~~~~~~~  180 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA--------GINHRDCYICHFLLHLPFPGREE  180 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC--------cCccCCCChhhEEEeccccCCCC
Confidence            458999999875 79988752   4456677789999999999999999        9999999999999985       


Q ss_pred             CCcEEEEecCCcc
Q psy14889        277 NGTCVIADFGLAV  289 (443)
Q Consensus       277 ~~~~kl~DfGla~  289 (443)
                      +..+.|+||+.+.
T Consensus       181 ~~~~~LIDl~r~~  193 (268)
T PRK15123        181 DLKLSVIDLHRAQ  193 (268)
T ss_pred             CceEEEEECCccc
Confidence            4688999999874

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.86  E-value=2.2e-08  Score=88.54  Aligned_cols=122  Identities=25%  Similarity=0.321  Sum_probs=76.2

Q ss_pred             EEEEEEE-CCceeEEEEeeccC------------ccc---------------hHHHHHHHHHHhccCC--Cceeeeeecc
Q psy14889        151 EVWRGVW-HGENVAVKIFFSRD------------EAS---------------WSRETEIYSTVLLRHE--NILGYIGSDM  200 (443)
Q Consensus       151 ~Vy~~~~-~~~~vAvK~~~~~~------------~~~---------------~~~e~ei~~~~~l~H~--nIv~l~g~~~  200 (443)
                      .||.|.. +|..+|||+.+...            ...               ...+.|...+..+..-  ++.+.+++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            3899987 78899999863210            000               1113566666556655  455555442 


Q ss_pred             ccCCcccEEEeeecccC--cccHHHHhcccCCCHHHHHHHHHHHHHHHHHH-HHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        201 TSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL-HTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       201 ~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                        .     -.|||||++  +..+.. |....++......++.+++..+..+ |..        ||+|+||.+.|||++++
T Consensus        80 --~-----~~ivME~I~~~G~~~~~-l~~~~~~~~~~~~~~~~il~~~~~~~~~~--------givHGDLs~~NIlv~~~  143 (188)
T PF01163_consen   80 --R-----NVIVMEYIGEDGVPLPR-LKDVDLSPEEPKELLEEILEEIIKMLHKA--------GIVHGDLSEYNILVDDG  143 (188)
T ss_dssp             --T-----TEEEEE--EETTEEGGC-HHHCGGGGSTHHHHHHHHHHHHHHHHHCT--------TEEESS-STTSEEEETT
T ss_pred             --C-----CEEEEEecCCCccchhh-HHhccccchhHHHHHHHHHHHHHHHHHhc--------CceecCCChhhEEeecc
Confidence              1     279999998  544433 4443444566677888888866665 566        99999999999999887


Q ss_pred             CcEEEEecCCccc
Q psy14889        278 GTCVIADFGLAVS  290 (443)
Q Consensus       278 ~~~kl~DfGla~~  290 (443)
                       .+.|+|||.+..
T Consensus       144 -~~~iIDf~qav~  155 (188)
T PF01163_consen  144 -KVYIIDFGQAVD  155 (188)
T ss_dssp             -CEEE--GTTEEE
T ss_pred             -eEEEEecCccee
Confidence             999999998754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137|consensus

Probab=98.82  E-value=1.9e-09  Score=108.98  Aligned_cols=152  Identities=17%  Similarity=0.268  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCc----CCCCC-CCcccccCccccc
Q psy14889        241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK----MDIPP-NPRVGTKRYMSPE  315 (443)
Q Consensus       241 qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----~~~~~-~~~~gt~~y~aPE  315 (443)
                      +++.||.|+|..       +++||++|.|++|.++..+..||+.|+++.........    ++... .-..-...|.|||
T Consensus       107 ~v~dgl~flh~s-------Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE  179 (700)
T KOG2137|consen  107 NVADGLAFLHRS-------AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPE  179 (700)
T ss_pred             cccchhhhhccC-------cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccch
Confidence            345999999976       49999999999999999999999999988655442211    11110 1112346799999


Q ss_pred             ccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCch
Q psy14889        316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDS  395 (443)
Q Consensus       316 ~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (443)
                      ++.+.      ..+.++|++|+|+++|-+..|.+..  +.....+-.        ....       ...........+.+
T Consensus       180 ~~~~~------~~~~~sd~fSlG~li~~i~~~gk~i--~~a~~~~~~--------~~~~-------~~~~~~~~~~~s~~  236 (700)
T KOG2137|consen  180 YLLGT------TNTPASDVFSLGVLIYTIYNGGKSI--IAANGGLLS--------YSFS-------RNLLNAGAFGYSNN  236 (700)
T ss_pred             hhccc------cccccccceeeeeEEEEEecCCcch--hhccCCcch--------hhhh-------hccccccccccccc
Confidence            99875      5568999999999999998553321  000000100        0000       00111111112355


Q ss_pred             hHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        396 TLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       396 ~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      .+.++++=+.+++..++..||++.++.
T Consensus       237 ~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  237 LPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             CcHHHHHHHHHHhcCCcccCcchhhhh
Confidence            778999999999999999999777654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.71  E-value=1.5e-07  Score=85.04  Aligned_cols=91  Identities=19%  Similarity=0.216  Sum_probs=71.4

Q ss_pred             ceeeeeeccccCCcccEEEeeecccCc-ccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        192 ILGYIGSDMTSRNSCTQLWLVTHYHSF-GSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       192 Iv~l~g~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                      +.+.+++..........-++|+|++++ -+|.+++.. ...+......++.+++..+.-||..        ||+|+|+++
T Consensus        75 tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~--------gi~H~Dl~~  146 (206)
T PF06293_consen   75 TPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDA--------GIYHGDLNP  146 (206)
T ss_pred             CCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHC--------cCCCCCCCc
Confidence            334444444433322446899999987 479998865 3467777889999999999999999        999999999


Q ss_pred             CCEEEcCCC---cEEEEecCCccc
Q psy14889        270 KNILVKTNG---TCVIADFGLAVS  290 (443)
Q Consensus       270 ~NiLl~~~~---~~kl~DfGla~~  290 (443)
                      .|||++.+.   .+.++||+-++.
T Consensus       147 ~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  147 SNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             ccEEEeCCCCceeEEEEcchhcee
Confidence            999999887   899999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.70  E-value=4.1e-07  Score=81.06  Aligned_cols=136  Identities=15%  Similarity=0.097  Sum_probs=94.6

Q ss_pred             eeeecCeEEEEEEECCceeEEEEee---------ccCccchHHHHHHHHHHhccCC--CceeeeeeccccCCcccEEEee
Q psy14889        144 IGKGRYGEVWRGVWHGENVAVKIFF---------SRDEASWSRETEIYSTVLLRHE--NILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       144 lG~G~fg~Vy~~~~~~~~vAvK~~~---------~~~~~~~~~e~ei~~~~~l~H~--nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      -|+||.+-|++-.+.|..+-+|.-.         ......+.+|.  ..+..+..-  .+.+.........+...+-+||
T Consensus        26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~--~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREV--AVIKELERAGVIVPKIVFGEAVKIEGEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHH--HHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence            3678999999999888888899653         11223344443  333333322  2333332222222223456899


Q ss_pred             ecccC-cccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc--EEEEecC
Q psy14889        213 THYHS-FGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT--CVIADFG  286 (443)
Q Consensus       213 ~e~~~-~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfG  286 (443)
                      +|-+. .-||.+++.+.   +.+......++.+++..+.-||+.        |+.|+|+.+.||+++.++.  ++++||.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~--------Gv~Hgdly~khIll~~~g~~~v~lIDlE  175 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV--------NRQHGCCYVRHIYVKTEGKAEAGFLDLE  175 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC--------CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence            99665 35899888664   346777889999999999999999        9999999999999986666  9999997


Q ss_pred             Ccc
Q psy14889        287 LAV  289 (443)
Q Consensus       287 la~  289 (443)
                      -++
T Consensus       176 k~r  178 (216)
T PRK09902        176 KSR  178 (216)
T ss_pred             ccc
Confidence            553

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.54  E-value=4.5e-07  Score=82.78  Aligned_cols=131  Identities=24%  Similarity=0.271  Sum_probs=87.0

Q ss_pred             ccccceeeeecCeEEEEEEE-CCceeEEEEeecc-----------------Ccc------chHHHHHHHHHHhccCC--C
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSR-----------------DEA------SWSRETEIYSTVLLRHE--N  191 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~-----------------~~~------~~~~e~ei~~~~~l~H~--n  191 (443)
                      ..+...||-|--+.||.|.. .|.++|||.-+..                 ...      ....++|...+..|.-.  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            45778999999999999998 6999999953210                 001      11224555555545433  4


Q ss_pred             ceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       192 Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +.+-+++        +.-.+||||.++--|...    +++....-.++..|+.-+.-+-..        ||||+|+.+-|
T Consensus       173 VP~P~~~--------nRHaVvMe~ieG~eL~~~----r~~~en~~~il~~il~~~~~~~~~--------GiVHGDlSefN  232 (304)
T COG0478         173 VPKPIAW--------NRHAVVMEYIEGVELYRL----RLDVENPDEILDKILEEVRKAYRR--------GIVHGDLSEFN  232 (304)
T ss_pred             CCCcccc--------ccceeeeehcccceeecc----cCcccCHHHHHHHHHHHHHHHHHc--------CccccCCchhe
Confidence            5554443        334799999987555432    223344444444455444444455        99999999999


Q ss_pred             EEEcCCCcEEEEecCCc
Q psy14889        272 ILVKTNGTCVIADFGLA  288 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla  288 (443)
                      |+++++|.+.++||=-+
T Consensus       233 IlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         233 ILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             EEEecCCCEEEEeCccc
Confidence            99999999999999543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.51  E-value=7.8e-06  Score=83.13  Aligned_cols=138  Identities=20%  Similarity=0.214  Sum_probs=86.2

Q ss_pred             ceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHH-------------------------------------H----H
Q psy14889        142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSR-------------------------------------E----T  179 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~-------------------------------------e----~  179 (443)
                      +.|+.++-|+||+|++ +|+.||||+.+..-......                                     |    .
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            6799999999999999 59999999874421111000                                     0    1


Q ss_pred             HHHHHHh----ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHch
Q psy14889        180 EIYSTVL----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH--LNRTTLNHHQMMKICLSIVNGLVHLHTEI  253 (443)
Q Consensus       180 ei~~~~~----l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~--l~~~~l~~~~~~~i~~qia~gL~yLH~~~  253 (443)
                      |......    ++...=+.+=.++.+-   ++.-.|+|||+.|-.+.+.  ++...++...+.....++.--.-+-|   
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~---t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~d---  284 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEY---TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRD---  284 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhc---cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhc---
Confidence            1111111    2222212222222211   1234899999999888887  45566665554443333332222223   


Q ss_pred             hcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       254 ~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                             |+.|.|..|.||+++.++++.+.|||+...+.
T Consensus       285 -------gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         285 -------GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             -------CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence                   88999999999999999999999999985544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.39  E-value=4.5e-06  Score=74.77  Aligned_cols=144  Identities=18%  Similarity=0.122  Sum_probs=92.5

Q ss_pred             HHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHH----------HHHHHHHHhccCC---Cceeee
Q psy14889        130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSR----------ETEIYSTVLLRHE---NILGYI  196 (443)
Q Consensus       130 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~----------e~ei~~~~~l~H~---nIv~l~  196 (443)
                      ....+..+|...+++-......|.+-..+|..+.+|.........+.+          ...+.....++..   .+..++
T Consensus        25 ~~~i~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y  104 (229)
T PF06176_consen   25 GEKILDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY  104 (229)
T ss_pred             HHHHHhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence            345566889999999888888888888899999999775533211111          1122222222221   222222


Q ss_pred             eecccc-CCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        197 GSDMTS-RNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       197 g~~~~~-~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                      .+.... ..-....+|+|||++|-.|.++..   +++    .++..++.++.-||..        |+.|+|..|.|++++
T Consensus       105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~---i~e----~~~~ki~~~ikqlH~~--------G~~HGD~hpgNFlv~  169 (229)
T PF06176_consen  105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED---IDE----DLAEKIVEAIKQLHKH--------GFYHGDPHPGNFLVS  169 (229)
T ss_pred             eeeeeeeccceeEEEEEEEEecCeecccchh---cCH----HHHHHHHHHHHHHHHc--------CCccCCCCcCcEEEE
Confidence            221111 111134578999999988776532   222    2456677889999999        999999999999998


Q ss_pred             CCCcEEEEecCCcc
Q psy14889        276 TNGTCVIADFGLAV  289 (443)
Q Consensus       276 ~~~~~kl~DfGla~  289 (443)
                      +++ ++++||+..+
T Consensus       170 ~~~-i~iID~~~k~  182 (229)
T PF06176_consen  170 NNG-IRIIDTQGKR  182 (229)
T ss_pred             CCc-EEEEECcccc
Confidence            555 9999998653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.35  E-value=6.9e-06  Score=75.29  Aligned_cols=144  Identities=19%  Similarity=0.211  Sum_probs=78.1

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeecc-CccchHHHHHHHHHHhccCC--CceeeeeeccccCCcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSR-DEASWSRETEIYSTVLLRHE--NILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~l~H~--nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      .+.|+.|..+.||+...++..+++|..... .......|.++...  +...  .+.+++........ ....+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~--l~~~~~pvP~~~~~~~~~~~-~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQ--LAEHGIPVPRVLAFDTSDEF-NGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHH--HHHTTSBS--EEEEEEETEE-TSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHH--HHhcCCCCceEEeecccccc-cccceEEEEEec
Confidence            467899999999999997789999987554 22333445444444  3322  34556654322221 134789999999


Q ss_pred             cccHHH----------------Hh---ccc--C---CCHHH---------HHHH------------HHHHHH-HHHHHHH
Q psy14889        218 FGSLYD----------------HL---NRT--T---LNHHQ---------MMKI------------CLSIVN-GLVHLHT  251 (443)
Q Consensus       218 ~gsL~~----------------~l---~~~--~---l~~~~---------~~~i------------~~qia~-gL~yLH~  251 (443)
                      +..+..                .+   +..  .   +....         ....            ...+.. .+..++.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            887777                11   010  0   01000         0000            111222 2333333


Q ss_pred             chhcCCCCCCeEEeCCCCCCEEEc-CCCcEEEEecCCc
Q psy14889        252 EIFGTQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLA  288 (443)
Q Consensus       252 ~~~~~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla  288 (443)
                      ... ......++|+|+.|.|||++ +++.+.|+||+.+
T Consensus       159 ~~~-~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  159 LLP-KPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             HHH-CCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             hhc-cCCCcEEEEeccccccceeeeccceeEEEecccc
Confidence            211 01245799999999999999 6666689999876

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1235|consensus

Probab=98.23  E-value=7.9e-06  Score=82.86  Aligned_cols=136  Identities=21%  Similarity=0.226  Sum_probs=91.1

Q ss_pred             ceeeeecCeEEEEEEE-CCceeEEEEeeccCc----------------------------------------cchHHHHH
Q psy14889        142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE----------------------------------------ASWSRETE  180 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~----------------------------------------~~~~~e~e  180 (443)
                      +.||.-+.|+|++|+. +|+.||||+-+..-.                                        -++..|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            6799999999999998 789999998543211                                        01112211


Q ss_pred             HH--HHHhccCCC------ceeeeeeccccCCcccEEEeeecccCcccHHH--HhcccCCCHHHHHHHHHHHHHHHHHHH
Q psy14889        181 IY--STVLLRHEN------ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLH  250 (443)
Q Consensus       181 i~--~~~~l~H~n------Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~--~l~~~~l~~~~~~~i~~qia~gL~yLH  250 (443)
                      -.  ....+.|-+      |.+++-.+.      ....|+||||+|..+.+  .+.+..++...+..-+.++..-+-+-|
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~s------t~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~  320 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLS------TKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKT  320 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcC------cceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Confidence            11  011144555      333332222      23589999999987755  456677888877666666554444444


Q ss_pred             HchhcCCCCCCeEEeCCCCCCEEEcC----CCcEEEEecCCcccccc
Q psy14889        251 TEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       251 ~~~~~~~~~~~iiHrDlk~~NiLl~~----~~~~kl~DfGla~~~~~  293 (443)
                                |++|+|=.|.||++..    ++.+.+-|||+...+..
T Consensus       321 ----------GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 ----------GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             ----------CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence                      8899999999999984    56899999999876654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.22  E-value=2e-05  Score=71.47  Aligned_cols=140  Identities=21%  Similarity=0.233  Sum_probs=87.7

Q ss_pred             ccccccce---eeeecCeEEEEEEE-CCceeEEEEeeccCccc------------h-------HH------HHHHHHHHh
Q psy14889        136 KQISLSEC---IGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS------------W-------SR------ETEIYSTVL  186 (443)
Q Consensus       136 ~~~~~~~~---lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~------------~-------~~------e~ei~~~~~  186 (443)
                      ++..+...   |++|--+.||+|.- ++..+|||+.+......            +       ..      ++|...+.+
T Consensus        45 ~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R  124 (268)
T COG1718          45 SRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKR  124 (268)
T ss_pred             cCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            44444444   45566668999986 68999999875321110            0       00      233333333


Q ss_pred             ccCC--CceeeeeeccccCCcccEEEeeecccCcc-cHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeE
Q psy14889        187 LRHE--NILGYIGSDMTSRNSCTQLWLVTHYHSFG-SLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIA  263 (443)
Q Consensus       187 l~H~--nIv~l~g~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~ii  263 (443)
                      +.--  .+.+-+++        ..-.|||||+... .-.-.|+.-++...+...+..++++.+.-|-..+       ++|
T Consensus       125 ~~eAGVrvP~Pi~~--------~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a-------~LV  189 (268)
T COG1718         125 AYEAGVRVPEPIAF--------RNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEA-------GLV  189 (268)
T ss_pred             HHHcCCCCCCceee--------cCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhc-------Ccc
Confidence            2211  11122222        1126999998653 2222334444555577888889999998888732       999


Q ss_pred             EeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        264 HRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       264 HrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+||..-|||+. ++.+.|+|||-|...
T Consensus       190 HgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         190 HGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             cccchhhheEEE-CCeEEEEECcccccc
Confidence            999999999999 889999999987543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.18  E-value=1.9e-05  Score=67.77  Aligned_cols=129  Identities=16%  Similarity=0.247  Sum_probs=83.0

Q ss_pred             cccccceeeeecCeEEEEEEECCceeEEEEeeccC-ccchHHHHHHHHHHhccCCCce-eeeeeccccCCcccEEEeeec
Q psy14889        137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD-EASWSRETEIYSTVLLRHENIL-GYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H~nIv-~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .....+.|++|++|.||+|.|.|..+|+|+-..+. ......|++++..  +.-.++- +++.|..        -++.||
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLei--l~g~~~~p~vy~yg~--------~~i~me   92 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEI--LAGEGVTPEVYFYGE--------DFIRME   92 (201)
T ss_pred             hhhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHH--hhhcCCCceEEEech--------hhhhhh
Confidence            34556789999999999999999999999765433 3344556666555  4444443 3444422        246799


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCC-CCCEEEcCCCcEEEEecCCcc
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIK-SKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk-~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |..+-.|.+.-...  +.+++..+    +.. +|.-+..       ||-|..|. |...+|..+..+.|+||..|+
T Consensus        93 ~i~G~~L~~~~~~~--~rk~l~~v----lE~-a~~LD~~-------GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112          93 YIDGRPLGKLEIGG--DRKHLLRV----LEK-AYKLDRL-------GIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhcCcchhhhhhcc--cHHHHHHH----HHH-HHHHHHh-------ccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            99987887765322  33334333    333 3333321       88888875 444455555599999998875

>KOG1035|consensus

Probab=98.18  E-value=4.3e-06  Score=89.69  Aligned_cols=203  Identities=18%  Similarity=0.257  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchh
Q psy14889        176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF  254 (443)
Q Consensus       176 ~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~  254 (443)
                      ..|.|+..+.++.|+|++.+++|..........+.+..|++..-++...+.. ..++....+.+..++..||+|+|+.  
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~--  305 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL--  305 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh--
Confidence            3467777888899999999999876654432234455688888888888764 6688889999999999999999988  


Q ss_pred             cCCCCCCeEEeCCCCC---CEEEcCCCcEEEE--ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCC
Q psy14889        255 GTQGKPAIAHRDIKSK---NILVKTNGTCVIA--DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF  329 (443)
Q Consensus       255 ~~~~~~~iiHrDlk~~---NiLl~~~~~~kl~--DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  329 (443)
                            ...|.-|..+   +--.+..+...++  ||+.++.+.......     ...-+..|.+||.......    ...
T Consensus       306 ------~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~-----~~~~~~~~~~~e~~~~~~~----~~~  370 (1351)
T KOG1035|consen  306 ------SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF-----SDLLAEIRNADEDLKENTA----KKS  370 (1351)
T ss_pred             ------ccceeEEecccccccccCccceeecchhhhcccccCCCcccch-----hhcCccccccccccccccc----hhh
Confidence                  4455555444   4445556666666  888876665433221     1123456778887765522    222


Q ss_pred             CccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhc
Q psy14889        330 KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWH  409 (443)
Q Consensus       330 ~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  409 (443)
                      ...|+|.+|..+..+..|......                               ...+....+........+...+|+.
T Consensus       371 r~~dL~~lgll~~~~~~~~~i~~~-------------------------------~~~~~~~l~~~~~~~~~d~~~~~~~  419 (1351)
T KOG1035|consen  371 RLTDLWCLGLLLLQLSQGEDISEK-------------------------------SAVPVSLLDVLSTSELLDALPKCLD  419 (1351)
T ss_pred             hhhHHHHHHHHHhhhhhcCccccc-------------------------------ccchhhhhccccchhhhhhhhhhcc
Confidence            446999999999999887221100                               0000000111122257789999999


Q ss_pred             CCcCCCCcHHHHHHHHH
Q psy14889        410 QNANVRLSALRVKKTLI  426 (443)
Q Consensus       410 ~dP~~Rps~~evl~~L~  426 (443)
                      .++++|+++.+++...-
T Consensus       420 ~~~~~Rl~~~~ll~~~f  436 (1351)
T KOG1035|consen  420 EDSEERLSALELLTHPF  436 (1351)
T ss_pred             hhhhhccchhhhhhchh
Confidence            99999999999987654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.15  E-value=3.2e-05  Score=71.81  Aligned_cols=135  Identities=17%  Similarity=0.140  Sum_probs=78.9

Q ss_pred             eeeecC-eEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHH
Q psy14889        144 IGKGRY-GEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY  222 (443)
Q Consensus       144 lG~G~f-g~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~  222 (443)
                      |-.|.+ ..||+....+..+.||+...........|.+++.... .+--+.+++++....    ...++|||+.++.+|.
T Consensus         6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~-~~~~vP~v~~~~~~~----~~~~lv~e~i~G~~l~   80 (244)
T cd05150           6 VTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLA-GKLPVPEVIDYGSDD----GRAWLLTSAVPGVPAA   80 (244)
T ss_pred             cCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHH-hcCCCCeEEEEEecC----CccEEEEEeeCCccHh
Confidence            445555 6899987777788889775443333445555554432 233345566655443    2348999999987776


Q ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHc-----------------------------------------------h--
Q psy14889        223 DHLNRTTLNHHQMMKICLSIVNGLVHLHTE-----------------------------------------------I--  253 (443)
Q Consensus       223 ~~l~~~~l~~~~~~~i~~qia~gL~yLH~~-----------------------------------------------~--  253 (443)
                      ....     ......++.++++.|.-||+.                                               .  
T Consensus        81 ~~~~-----~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (244)
T cd05150          81 ALWE-----ELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEA  155 (244)
T ss_pred             Hhhc-----ccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHh
Confidence            4321     000111122222222222211                                               0  


Q ss_pred             -hcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        254 -FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       254 -~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                       ......+.++|+|+.|.|||++++....|+||+.+
T Consensus       156 ~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         156 TRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             hCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence             00123467999999999999999888899999876

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0576|consensus

Probab=98.11  E-value=5.8e-07  Score=90.51  Aligned_cols=187  Identities=18%  Similarity=0.170  Sum_probs=126.3

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCC-ceeeeeeccccCCcccEEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN-ILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~n-Iv~l~g~~~~~~~~~~~~~  210 (443)
                      ...+-+....-+++|+++.++|.+-. .+....+.+...    ..+..++..+.+.+||| .+..++-+...    ...+
T Consensus       239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E----~~~~  310 (829)
T KOG0576|consen  239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGE----DYLW  310 (829)
T ss_pred             CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcc----cccc
Confidence            33455666677899999999998764 233335544332    22233344444589999 55555443332    4579


Q ss_pred             eeecccCcc-cHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFG-SLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~g-sL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++++++..| +-.....  ...+..-+...+.+.-.++|+|||+.        .=+|+|    ||+..+ +..|..||+.
T Consensus       311 i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~--------~~~~~d----~~l~s~-~~~~~~~~~v  377 (829)
T KOG0576|consen  311 IPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS--------YKVHRD----NILGSE-EEVKLLDFAV  377 (829)
T ss_pred             hhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccc--------cccCcc----cccccc-cccccccccC
Confidence            999999887 2222211  22344555666777788999999976        348998    777755 6789999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      ...+....     ..+...+|+.|+|||+...+      .+..+.|+||+|+--.++.-|-+|.
T Consensus       378 ~~~L~~~~-----~~~t~~~~~~~~~pev~~~~------~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  378 PPQLTRTM-----KPRTAIGTPEPLAPEVIQEN------TIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             CcccCccc-----ccccCCCCCCCCCchhhccc------ccccCCCccCCCcchhhcCCCCCCC
Confidence            87665432     24566899999999988877      4556899999998777777775543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.11  E-value=6.8e-05  Score=68.71  Aligned_cols=135  Identities=14%  Similarity=0.107  Sum_probs=75.6

Q ss_pred             ceeeeecCeEEEEEEECCceeEEEEeeccC-ccchHHHHHHHHHHhccCCC--ceeeeeeccccCCcccEEEeeecccCc
Q psy14889        142 ECIGKGRYGEVWRGVWHGENVAVKIFFSRD-EASWSRETEIYSTVLLRHEN--ILGYIGSDMTSRNSCTQLWLVTHYHSF  218 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H~n--Iv~l~g~~~~~~~~~~~~~lv~e~~~~  218 (443)
                      ..||+|..+.||+.  .|..+++|...... .....+|.++...  +..-.  +.+.+++....    ....+|||+++|
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~--l~~~glpvP~~~~~~~~~----~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRK--VFSLGIPTPHPFDLVEDG----GRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHH--HHHcCCCCCceEEEEecC----CeeeeeeeecCC
Confidence            56899999999984  35567888765432 2233344444433  33222  34445554333    235789999988


Q ss_pred             cc-HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh-----------------------------------cCCCCCCe
Q psy14889        219 GS-LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF-----------------------------------GTQGKPAI  262 (443)
Q Consensus       219 gs-L~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~-----------------------------------~~~~~~~i  262 (443)
                      .+ +...+.   .+......++.++++.+.-||+...                                   .-...+.+
T Consensus        79 ~~~~~~~~~---~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  155 (226)
T TIGR02172        79 KRSFSRIIS---DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC  155 (226)
T ss_pred             ccchhhhhc---CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence            53 221111   1111112222222222222332100                                   00124567


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|+|+.|.||++++++ +.|+||+.+
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a  180 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDF  180 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhc
Confidence            9999999999999888 999999976

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.04  E-value=9e-05  Score=65.70  Aligned_cols=128  Identities=20%  Similarity=0.216  Sum_probs=85.6

Q ss_pred             ccccccceeeeecC-eEEEEEEECCceeEEEEeec---cCc---------cc----------hHHHHHHHHHHh---ccC
Q psy14889        136 KQISLSECIGKGRY-GEVWRGVWHGENVAVKIFFS---RDE---------AS----------WSRETEIYSTVL---LRH  189 (443)
Q Consensus       136 ~~~~~~~~lG~G~f-g~Vy~~~~~~~~vAvK~~~~---~~~---------~~----------~~~e~ei~~~~~---l~H  189 (443)
                      .+++..+.||.|.- |.||+++.+|+.+|+|++..   ...         ..          .-+..|...-.+   ..+
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            68999999999999 99999999999999998321   000         00          011223332222   455


Q ss_pred             CCc--eeeeeeccccC--------------CcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHch
Q psy14889        190 ENI--LGYIGSDMTSR--------------NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI  253 (443)
Q Consensus       190 ~nI--v~l~g~~~~~~--------------~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~  253 (443)
                      .++  |+.+|+..-..              .......||-||.+...        .++...    +.+|.+-|..+|.. 
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~~~~~~----~~~~~~dl~~~~k~-  183 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------PLQIRD----IPQMLRDLKILHKL-  183 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------ccchhH----HHHHHHHHHHHHHC-
Confidence            567  88999864331              11123567888776533        233333    35566667889988 


Q ss_pred             hcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       254 ~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                             ||+-+|+++.|..     .-||+|||.+
T Consensus       184 -------gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  184 -------GIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             -------CeeeccCcccccc-----CCEEEecccC
Confidence                   9999999999986     3589999864

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.95  E-value=3.6e-05  Score=68.33  Aligned_cols=99  Identities=23%  Similarity=0.202  Sum_probs=76.1

Q ss_pred             HHHHHHhccC-CCceeeeeeccccCCcccEEEeeecccCcccHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHHchh
Q psy14889        180 EIYSTVLLRH-ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH----LNRTTLNHHQMMKICLSIVNGLVHLHTEIF  254 (443)
Q Consensus       180 ei~~~~~l~H-~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~----l~~~~l~~~~~~~i~~qia~gL~yLH~~~~  254 (443)
                      |...+..+++ +++.+++|+|-.        ++|.||...+++...    .+-...+|..+.+|+.+++..+.+|++...
T Consensus         9 E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~   80 (188)
T PF12260_consen    9 EPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL   80 (188)
T ss_pred             HHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            4444544666 599999999832        578899987766421    111347899999999999999999998532


Q ss_pred             cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       255 ~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                          . .+.-.|++++|+-+++++++|++|...+...
T Consensus        81 ----~-~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   81 ----G-FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             ----C-cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence                1 4677999999999999999999999876443

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK10593 hypothetical protein; Provisional

Probab=97.91  E-value=0.00031  Score=67.24  Aligned_cols=82  Identities=17%  Similarity=0.053  Sum_probs=52.2

Q ss_pred             cccccceeeeecCeEEEEEEECCceeEEEEeecc-CccchHHHHHHHHHHhccC---CCceeeeeeccccCCcccEEEee
Q psy14889        137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR-DEASWSRETEIYSTVLLRH---ENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~l~H---~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ...-.+.||.|..+.||+....+..+.+|..+.. ....+..|.+.+..  +.-   -.+.++++++..... .+.-+||
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~--L~~~~~vpVP~V~~~~~~~~~-~g~~~LV   91 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSM--LARSGTVRMPTVYGVMTHEQS-PGPDVLL   91 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHH--HccCCCCCcCcEEEEeccCCc-CCCeEEE
Confidence            3444678999999999998775556777875432 23345556555544  332   356677776654321 1336999


Q ss_pred             ecccCcccH
Q psy14889        213 THYHSFGSL  221 (443)
Q Consensus       213 ~e~~~~gsL  221 (443)
                      ||+++++++
T Consensus        92 mE~i~G~~~  100 (297)
T PRK10593         92 LERLRGVSV  100 (297)
T ss_pred             EeccCCEec
Confidence            999988654

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.85  E-value=0.00021  Score=65.88  Aligned_cols=72  Identities=15%  Similarity=0.126  Sum_probs=43.4

Q ss_pred             ceeeeecCeEEEEEEEC---CceeEEEEeeccCccchHHHHHHHHHHhccCCC-ceeeeeeccccCCcccEEEeeecccC
Q psy14889        142 ECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN-ILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~n-Iv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      +.|..|-...+|+....   +..+++|+..........++.|+..+..+...+ ..++++... .       .++|||++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~-------~~l~e~i~   75 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ-N-------GLIYEFIP   75 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC-C-------cEEEEeeC
Confidence            56777888899998764   578889976543333334444554444453333 334444321 1       47999998


Q ss_pred             cccH
Q psy14889        218 FGSL  221 (443)
Q Consensus       218 ~gsL  221 (443)
                      +.++
T Consensus        76 G~~l   79 (235)
T cd05157          76 GRTL   79 (235)
T ss_pred             CCcC
Confidence            8655

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.84  E-value=0.00045  Score=61.64  Aligned_cols=127  Identities=21%  Similarity=0.225  Sum_probs=83.8

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccC-------------------ccchHHHHHHHHH----HhccCCCceeeee
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRD-------------------EASWSRETEIYST----VLLRHENILGYIG  197 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-------------------~~~~~~e~ei~~~----~~l~H~nIv~l~g  197 (443)
                      ...||+|+.-.||.-- ......||+.....                   ..+..+|..-...    ....+.+|.+++|
T Consensus         6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             CcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            4679999999998643 34556788876544                   2222333222221    1234788999999


Q ss_pred             eccccCCcccEEEeeecccCc------ccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSF------GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +..++..    +.+|+|...+      -+|.+++.+..++. .....+.+.   ..||-.+        .|+.+||+|.|
T Consensus        85 ~veT~~G----~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~~~L~~f---~~~l~~~--------~Iv~~dl~~~N  148 (199)
T PF10707_consen   85 FVETNLG----LGLVVELIRDADGNISPTLEDYLKEGGLTE-ELRQALDEF---KRYLLDH--------HIVIRDLNPHN  148 (199)
T ss_pred             EEecCCc----eEEEEEEEECCCCCcCccHHHHHHcCCccH-HHHHHHHHH---HHHHHHc--------CCeecCCCccc
Confidence            9988865    3566665322      46888888777777 444444443   4566666        89999999999


Q ss_pred             EEEcCCC----cEEEEe
Q psy14889        272 ILVKTNG----TCVIAD  284 (443)
Q Consensus       272 iLl~~~~----~~kl~D  284 (443)
                      |++....    .+.|+|
T Consensus       149 Iv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  149 IVVQRRDSGEFRLVLID  165 (199)
T ss_pred             EEEEecCCCceEEEEEe
Confidence            9996543    577787

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.79  E-value=0.00019  Score=66.27  Aligned_cols=30  Identities=30%  Similarity=0.513  Sum_probs=26.2

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .+.++|+|+.+.|||++++...-|+||+.+
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            456999999999999987766789999976

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=97.77  E-value=0.0003  Score=76.85  Aligned_cols=148  Identities=12%  Similarity=0.079  Sum_probs=83.3

Q ss_pred             cceeeeecCeEEEEEEECC----ceeEEEEeeccCc--cchHHHHHHHHHHhcc-CCCc--eeeeeeccccCCcccEEEe
Q psy14889        141 SECIGKGRYGEVWRGVWHG----ENVAVKIFFSRDE--ASWSRETEIYSTVLLR-HENI--LGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~----~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~-H~nI--v~l~g~~~~~~~~~~~~~l  211 (443)
                      .+.|+.|.+..+|+....+    ..+++|+......  .....+.|...+..+. |.++  .++++++.+... ....|+
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v-~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASV-IGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCc-CCCceE
Confidence            5678999999999987743    4677776533221  1112334444444454 6654  677777765421 134589


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHH----------------------------------------------
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG----------------------------------------------  245 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~g----------------------------------------------  245 (443)
                      ||||+++..+.+.. -..++..++..++.++++.                                              
T Consensus       122 VME~v~G~~~~~~~-~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~  200 (822)
T PLN02876        122 IMEYLEGRIFVDPK-LPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR  200 (822)
T ss_pred             EEEecCCcccCCcc-CCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence            99999875432110 0012222233333333333                                              


Q ss_pred             -------HHHHHHchhcCCC---CCCeEEeCCCCCCEEEcCC-C-cEEEEecCCccc
Q psy14889        246 -------LVHLHTEIFGTQG---KPAIAHRDIKSKNILVKTN-G-TCVIADFGLAVS  290 (443)
Q Consensus       246 -------L~yLH~~~~~~~~---~~~iiHrDlk~~NiLl~~~-~-~~kl~DfGla~~  290 (443)
                             +.+|..+......   .+.+||+|+++.|||++.+ . ..-|.||+++..
T Consensus       201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence                   3444333111000   2469999999999999853 3 357999998753

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.69  E-value=0.00028  Score=66.05  Aligned_cols=136  Identities=17%  Similarity=0.148  Sum_probs=71.2

Q ss_pred             eeeecCeEEEEEEECCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCc-eeeeeeccccCCcccEEEeeecccCcccH
Q psy14889        144 IGKGRYGEVWRGVWHGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENI-LGYIGSDMTSRNSCTQLWLVTHYHSFGSL  221 (443)
Q Consensus       144 lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nI-v~l~g~~~~~~~~~~~~~lv~e~~~~gsL  221 (443)
                      +..|-.+.+|+...++..+++|+.......- ..++.|...+..+....+ .++++..  .      -++|+||+++..+
T Consensus         4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~------~~~v~e~i~G~~~   75 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E------HWLLVEWLEGEVI   75 (256)
T ss_pred             CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C------CEEEEEeccCccc
Confidence            4567788999988888889999754332221 233444444433433222 2333332  1      1689999987655


Q ss_pred             HHH--------------h---ccc-----CCCHHH-HHHHHHHH---------HHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        222 YDH--------------L---NRT-----TLNHHQ-MMKICLSI---------VNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       222 ~~~--------------l---~~~-----~l~~~~-~~~i~~qi---------a~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                      ...              +   +..     .++... +..+..++         ..-+..+-.........+.++|+|+.|
T Consensus        76 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~  155 (256)
T TIGR02721        76 TLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHA  155 (256)
T ss_pred             ccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCc
Confidence            321              1   111     111111 11111111         111111111100011234689999999


Q ss_pred             CCEEEcCCCcEEEEecCCc
Q psy14889        270 KNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       270 ~NiLl~~~~~~kl~DfGla  288 (443)
                      .||++++++ +.|+||..|
T Consensus       156 ~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       156 YNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             CcEEEeCCC-CEEEecccc
Confidence            999999877 789999877

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.53  E-value=0.00059  Score=65.25  Aligned_cols=145  Identities=12%  Similarity=0.062  Sum_probs=79.2

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCC--CceeeeeeccccC--CcccEEEeeeccc
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--NILGYIGSDMTSR--NSCTQLWLVTHYH  216 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~--nIv~l~g~~~~~~--~~~~~~~lv~e~~  216 (443)
                      .+.|..|....+|+...++..+++|+...........|.++...  +.+.  .+.+.+.......  ...+..+++++|+
T Consensus        19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~--L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i   96 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDH--LAERGLPVPRPIADRDGEYLSELAGKPAALVEFL   96 (296)
T ss_pred             eecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHH--HHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence            45677787789999887777899998754333333344444443  4332  2344433211000  0012458899999


Q ss_pred             CcccHHH----H-------h---cc--cC----------CCHHHHH----------HHHHHHHHHHHHHHHchhcCCCCC
Q psy14889        217 SFGSLYD----H-------L---NR--TT----------LNHHQMM----------KICLSIVNGLVHLHTEIFGTQGKP  260 (443)
Q Consensus       217 ~~gsL~~----~-------l---~~--~~----------l~~~~~~----------~i~~qia~gL~yLH~~~~~~~~~~  260 (443)
                      +|..+..    .       +   +.  ..          ..|....          .....+...+.++.... ......
T Consensus        97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~~  175 (296)
T cd05153          97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD-PSDLPR  175 (296)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh-hhcCCC
Confidence            8765422    0       0   10  00          0111110          01111233444444320 011234


Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +++|+|+.|.|||++++..+.|.||+.+
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhh
Confidence            7999999999999999877899999876

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.52  E-value=0.00083  Score=64.47  Aligned_cols=30  Identities=30%  Similarity=0.455  Sum_probs=26.9

Q ss_pred             CCCeEEeCCCCCCEEEcCC----CcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTN----GTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla  288 (443)
                      ...++|+|+.+.|||++++    +.++++||..|
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            4589999999999999985    78999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1826|consensus

Probab=97.30  E-value=0.00013  Score=80.45  Aligned_cols=147  Identities=15%  Similarity=0.060  Sum_probs=103.8

Q ss_pred             ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC
Q psy14889        187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA  261 (443)
Q Consensus       187 l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~  261 (443)
                      ..|+++.....-.....+  .+.|.+++|+.+|++.+.+-+     ..+...-+.....+...+..-+|+..   ....-
T Consensus      1286 ~~h~~~~~~p~rI~ps~s--~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t---nlg~T 1360 (2724)
T KOG1826|consen 1286 AKHYLTEVDPLRIPPSES--TEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT---NLGNT 1360 (2724)
T ss_pred             hhceeeecccccCCCCCC--hHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc---cCCcc
Confidence            589998877655443333  456899999999999998843     22333333333334366666666652   22224


Q ss_pred             eEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHH
Q psy14889        262 IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL  341 (443)
Q Consensus       262 iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl  341 (443)
                      -+|++||+-|.+|..+..+|+.++|+.+........    ....++++.|++|++...-      .++.++|+|+.|+-+
T Consensus      1361 ~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf----~Gl~l~sp~~v~qli~N~i------k~t~rsdilr~s~~l 1430 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF----FGLELCSPIYVLQLIKNEI------KFTKRSDILRRSLSL 1430 (2724)
T ss_pred             chhhhhhhhccceecCCcccccccccccccCchHhh----hhhhhCCHHHHHHHHHHHH------hhhhHHHHHHHHHHH
Confidence            589999999999999999999999999733322211    2345678889999988765      666779999999999


Q ss_pred             HHHHhcc
Q psy14889        342 WEVCRRT  348 (443)
Q Consensus       342 ~elltg~  348 (443)
                      |++..|.
T Consensus      1431 y~rs~~n 1437 (2724)
T KOG1826|consen 1431 YLRSDGN 1437 (2724)
T ss_pred             HHHhccc
Confidence            9988773

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.10  E-value=0.0055  Score=58.94  Aligned_cols=147  Identities=12%  Similarity=0.021  Sum_probs=77.9

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccC-ccchHHHHHHHHHHhccCCCceeeeeecccc--CCcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRD-EASWSRETEIYSTVLLRHENILGYIGSDMTS--RNSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~--~~~~~~~~lv~e~~~  217 (443)
                      .+.++.|....+|+...++..+++|+..... ......+.++.....-..-.+.+.+......  ....+..++++||++
T Consensus        27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~  106 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQ  106 (307)
T ss_pred             ccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCC
Confidence            4567777778999987766678889764421 2233344444433211111233333321100  000134689999988


Q ss_pred             cccHH-----H------Hh---cc--cCC-----------CHHHHH------------HHHHHHHHHHHHHHHchhcCCC
Q psy14889        218 FGSLY-----D------HL---NR--TTL-----------NHHQMM------------KICLSIVNGLVHLHTEIFGTQG  258 (443)
Q Consensus       218 ~gsL~-----~------~l---~~--~~l-----------~~~~~~------------~i~~qia~gL~yLH~~~~~~~~  258 (443)
                      |..+.     .      .+   +.  ..+           .|....            .....+...++++..... ...
T Consensus       107 G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~-~~~  185 (307)
T TIGR00938       107 GLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP-RDL  185 (307)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh-hcC
Confidence            74431     1      11   11  111           111100            011123345555543211 112


Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ..+++|+|+.+.|++++.++...|+||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            458999999999999999887789999976

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.06  E-value=0.015  Score=57.70  Aligned_cols=74  Identities=19%  Similarity=0.030  Sum_probs=45.7

Q ss_pred             cceeeeecCeEEEEEEEC-C-ceeEEEEeecc----------CccchHHHHHHHHHHh-ccCCCceeeeeeccccCCccc
Q psy14889        141 SECIGKGRYGEVWRGVWH-G-ENVAVKIFFSR----------DEASWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~-~-~~vAvK~~~~~----------~~~~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+.||.|.+..||++... | +.|+||.-...          .......|.+.+.... ..-.++.+++.+..+.     
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~-----  105 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEEL-----  105 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCC-----
Confidence            357899999999999984 4 48999974311          1122334555444321 1224577777773322     


Q ss_pred             EEEeeecccCccc
Q psy14889        208 QLWLVTHYHSFGS  220 (443)
Q Consensus       208 ~~~lv~e~~~~gs  220 (443)
                       .++||||+++..
T Consensus       106 -~~lVME~L~~~~  117 (401)
T PRK09550        106 -AVTVMEDLSDHK  117 (401)
T ss_pred             -CEEEEecCCCcc
Confidence             379999987643

>PRK05231 homoserine kinase; Provisional

Probab=97.05  E-value=0.0068  Score=58.60  Aligned_cols=30  Identities=23%  Similarity=0.349  Sum_probs=26.3

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ..++||+|+.+.|||++.+...-|+||+.+
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccc
Confidence            458999999999999997766689999976

>KOG2270|consensus

Probab=97.01  E-value=0.0055  Score=58.92  Aligned_cols=136  Identities=21%  Similarity=0.251  Sum_probs=94.3

Q ss_pred             cceeeeecCeEEEEEEE-CCceeEEEEeecc------------Cccc---------------hHHHHHHHHHHhccCCCc
Q psy14889        141 SECIGKGRYGEVWRGVW-HGENVAVKIFFSR------------DEAS---------------WSRETEIYSTVLLRHENI  192 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~------------~~~~---------------~~~e~ei~~~~~l~H~nI  192 (443)
                      -..|..|--+.||.+.- +|..+|||+.+..            .+.+               .-.|.|+..+.+++...|
T Consensus       149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI  228 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI  228 (520)
T ss_pred             ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            34678888899999987 7999999986421            0111               112567777666554443


Q ss_pred             eeeeeeccccCCcccEEEeeecccCc-ccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        193 LGYIGSDMTSRNSCTQLWLVTHYHSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       193 v~l~g~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      ..---+..      ..-.|||+|+.. |--.-.|+...++...+..+-.|++.-|.-|...|       ++||.||.--|
T Consensus       229 P~PePIlL------k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c-------~LVHADLSEfN  295 (520)
T KOG2270|consen  229 PCPEPILL------KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC-------RLVHADLSEFN  295 (520)
T ss_pred             CCCCceee------ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHh-------ceeccchhhhh
Confidence            21111111      112699999853 22333456677888889999999999999998876       89999999999


Q ss_pred             EEEcCCCcEEEEecCCccc
Q psy14889        272 ILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~  290 (443)
                      +|+ .+|.+.|+|-+-+..
T Consensus       296 ~Ly-hdG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  296 LLY-HDGKLYIIDVSQSVE  313 (520)
T ss_pred             heE-ECCEEEEEEcccccc
Confidence            998 467899999987643

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.91  E-value=0.01  Score=56.26  Aligned_cols=145  Identities=19%  Similarity=0.219  Sum_probs=67.9

Q ss_pred             ccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHH-hccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTV-LLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~-~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      ++-.+.++-|....+|+...+++.+.||+-.......+..|.+-+... ...--.+.+.+++......    -+||+||.
T Consensus        19 i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~----~fLlle~l   94 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD----AFLLLEFL   94 (288)
T ss_dssp             --EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC----CEEEEE--
T ss_pred             eeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC----ceEEEEee
Confidence            455677898999999998878899999987644444455554444332 1123346667776554433    38999998


Q ss_pred             Cccc--------HHHH---hcc-c---C-------------------CCHHH-----HHHHHHHHH-----------HHH
Q psy14889        217 SFGS--------LYDH---LNR-T---T-------------------LNHHQ-----MMKICLSIV-----------NGL  246 (443)
Q Consensus       217 ~~gs--------L~~~---l~~-~---~-------------------l~~~~-----~~~i~~qia-----------~gL  246 (443)
                      +.+.        |-..   |++ .   .                   -+|..     ++....+.+           +-+
T Consensus        95 ~~~~~~~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~~~~~~~l~  174 (288)
T PF03881_consen   95 EMGSPSPPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGLDAELERLV  174 (288)
T ss_dssp             ------CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS-CHHHHHH
T ss_pred             cCCCCCchhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH
Confidence            7761        1111   111 0   0                   11211     111111111           112


Q ss_pred             HHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       247 ~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +-+.+...+...+|-++|+||-+.|++.+.++.+.|.|=.
T Consensus       175 ~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa  214 (288)
T PF03881_consen  175 ERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPA  214 (288)
T ss_dssp             HHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S--
T ss_pred             HHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccc
Confidence            2233222223347899999999999999999889888743

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02236 choline kinase

Probab=96.88  E-value=0.019  Score=56.18  Aligned_cols=139  Identities=18%  Similarity=0.231  Sum_probs=74.7

Q ss_pred             ceeeeecCeEEEEEEEC------CceeEEEEeeccCccchHHHHHHHHHHhccCCCce-eeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL-GYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv-~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.|-.|-.-.+|+..+.      ++.|++|+..........++.|...+..+..-++. ++++.+..        ..|+|
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~--------g~v~e  113 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPN--------GRVEE  113 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECC--------ceEEE
Confidence            34545777899998752      35788997755444333445555544444433332 34454322        25678


Q ss_pred             ccCcccHHHH-----------------hcccC-------CCHHHHHHHHHH-----------------HHHHHHHHHHch
Q psy14889        215 YHSFGSLYDH-----------------LNRTT-------LNHHQMMKICLS-----------------IVNGLVHLHTEI  253 (443)
Q Consensus       215 ~~~~gsL~~~-----------------l~~~~-------l~~~~~~~i~~q-----------------ia~gL~yLH~~~  253 (443)
                      |+++.+|...                 +++..       ..+.++..+..+                 +...+..|....
T Consensus       114 fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~  193 (344)
T PLN02236        114 FIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKEL  193 (344)
T ss_pred             eeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHh
Confidence            8766554311                 01111       112222222211                 112222232221


Q ss_pred             hcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCCc
Q psy14889        254 FGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLA  288 (443)
Q Consensus       254 ~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla  288 (443)
                      ........++|+|+++.|||+++ ++.+.++||..|
T Consensus       194 ~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya  229 (344)
T PLN02236        194 SGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYA  229 (344)
T ss_pred             cccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhc
Confidence            11123457899999999999986 468999999876

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.75  E-value=0.012  Score=57.12  Aligned_cols=28  Identities=29%  Similarity=0.534  Sum_probs=24.8

Q ss_pred             CeEEeCCCCCCEEEcC-CCcEEEEecCCc
Q psy14889        261 AIAHRDIKSKNILVKT-NGTCVIADFGLA  288 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~-~~~~kl~DfGla  288 (443)
                      -++|.|+.+.|||+++ ++.++++||..|
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYa  211 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYG  211 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEccccc
Confidence            5799999999999975 478999999887

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.32  E-value=0.043  Score=52.59  Aligned_cols=45  Identities=20%  Similarity=0.333  Sum_probs=35.6

Q ss_pred             HHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       246 L~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ..||+.+......++.++|+|+.+.|++++.+.-+-|.||+++..
T Consensus       184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         184 IKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             HHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            455555543344567899999999999999998899999999854

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.18  E-value=0.019  Score=51.88  Aligned_cols=28  Identities=32%  Similarity=0.638  Sum_probs=20.4

Q ss_pred             CeEEeCCCCCCEEE-cCCCcEEEEecCCc
Q psy14889        261 AIAHRDIKSKNILV-KTNGTCVIADFGLA  288 (443)
Q Consensus       261 ~iiHrDlk~~NiLl-~~~~~~kl~DfGla  288 (443)
                      .++|+||.+.|||+ +.++.++++||..|
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya  172 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYA  172 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHH
Confidence            67899999999999 88899999999876

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG2268|consensus

Probab=96.15  E-value=0.0044  Score=58.58  Aligned_cols=130  Identities=19%  Similarity=0.234  Sum_probs=79.3

Q ss_pred             ccccceeeeecCeEEEEEEE-CCceeEEEEeec-----------------cCccchHH------HHHHHHHHhccC-C-C
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-HGENVAVKIFFS-----------------RDEASWSR------ETEIYSTVLLRH-E-N  191 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~-----------------~~~~~~~~------e~ei~~~~~l~H-~-n  191 (443)
                      +.+.+.||-|--+.||.+-. .|++.++|.-..                 .....|..      ..|..-+..|.- - -
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999988 599999984210                 11112221      223333333321 1 1


Q ss_pred             ceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       192 Iv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +.+-+++        .+-++|||+..+-.|...-+  -.+..++..-+..+   +--|-.+        |+||+|..-=|
T Consensus       174 VPkpiD~--------~RH~Vvmelv~g~Pl~~v~~--v~d~~~ly~~lm~~---Iv~la~~--------GlIHgDFNEFN  232 (465)
T KOG2268|consen  174 VPKPIDH--------NRHCVVMELVDGYPLRQVRH--VEDPPTLYDDLMGL---IVRLANH--------GLIHGDFNEFN  232 (465)
T ss_pred             CCCcccc--------cceeeHHHhhcccceeeeee--cCChHHHHHHHHHH---HHHHHHc--------Cceecccchhe
Confidence            2222222        34579999988766655422  12233333322222   2233344        99999999999


Q ss_pred             EEEcCCCcEEEEecCCc
Q psy14889        272 ILVKTNGTCVIADFGLA  288 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla  288 (443)
                      |++++++.++++||--.
T Consensus       233 imv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  233 IMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             eEEecCCCEEEeechHh
Confidence            99999999999999643

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.11  E-value=0.1  Score=51.82  Aligned_cols=79  Identities=15%  Similarity=0.039  Sum_probs=49.0

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeec-----c-----CccchHHHHHHHHHH-hccCCCceeeeeeccccCCcccEE
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFS-----R-----DEASWSRETEIYSTV-LLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~-----~-----~~~~~~~e~ei~~~~-~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.||-|....||+....+..++||.-..     .     ...+...|.+.+... .+...++.+++.++.+.      -
T Consensus        37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~------~  110 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM------A  110 (418)
T ss_pred             EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC------C
Confidence            56789999999999887777899996531     1     122223343333221 12224777888887643      2


Q ss_pred             EeeecccCc--ccHHHHh
Q psy14889        210 WLVTHYHSF--GSLYDHL  225 (443)
Q Consensus       210 ~lv~e~~~~--gsL~~~l  225 (443)
                      .++|||+++  ..+.+.+
T Consensus       111 vlvME~L~~~~~ilr~~L  128 (418)
T PLN02756        111 LIGMRYLEPPHIILRKGL  128 (418)
T ss_pred             EEEEeecCCcceehhhhh
Confidence            789999976  3454444

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.11  E-value=0.084  Score=51.42  Aligned_cols=28  Identities=25%  Similarity=0.380  Sum_probs=23.9

Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      .++|+|+.+.||+++++. ++++|+.++.
T Consensus       193 ~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             eeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            789999999999997654 7899998663

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.92  E-value=0.079  Score=50.98  Aligned_cols=30  Identities=13%  Similarity=0.245  Sum_probs=27.3

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ..+++|+|+.+.|+|++.++.+.++||..+
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~  224 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKA  224 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhc
Confidence            448999999999999999999999999876

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG1093|consensus

Probab=95.70  E-value=0.0028  Score=63.27  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=33.2

Q ss_pred             HHHHhccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccC
Q psy14889        182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT  229 (443)
Q Consensus       182 ~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~  229 (443)
                      ..++.+.|+|+..++.+.....   ....+|+|++.. ||++++..+.
T Consensus        34 ~~lktl~~~~l~~yl~~~r~~~---~r~IVV~e~~~~-Sled~~~~~~   77 (725)
T KOG1093|consen   34 QYLKSLQHDNLCQYLDFSRGKH---ERVIVVMEHYTM-SLEDILKTGN   77 (725)
T ss_pred             HHHHhhcCccceeeEeeecCcc---ceEEEEehhhcc-chHHHHHhcc
Confidence            3444589999999998865543   347899999975 9999886544

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=95.68  E-value=0.016  Score=53.48  Aligned_cols=37  Identities=22%  Similarity=0.619  Sum_probs=22.6

Q ss_pred             cccchhhhhhHHhHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14889         42 QRYDYILKLSMAILGPVIVLGMLAAVIVLFMRRNHRK   78 (443)
Q Consensus        42 ~~~~~~~~i~~~i~~~~~~l~~~~~~~~~~~~~~~~~   78 (443)
                      ++....|.+++++++++++++++.++++++.|.++++
T Consensus       207 ~~~~~~W~iv~g~~~G~~~L~ll~~lv~~~vr~krk~  243 (278)
T PF06697_consen  207 RKRSWWWKIVVGVVGGVVLLGLLSLLVAMLVRYKRKK  243 (278)
T ss_pred             CCcceeEEEEEEehHHHHHHHHHHHHHHhhhhhhHHH
Confidence            4444566677787787777777765555444444333

>PTZ00384 choline kinase; Provisional

Probab=95.65  E-value=0.15  Score=50.63  Aligned_cols=28  Identities=29%  Similarity=0.293  Sum_probs=23.4

Q ss_pred             CCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        260 PAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       260 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ...+|.|+-+.|||.++ ..+.++||-.|
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA  254 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFA  254 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEeccc
Confidence            46799999999998754 46999999765

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.53  E-value=0.3  Score=46.87  Aligned_cols=29  Identities=28%  Similarity=0.454  Sum_probs=25.4

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .++++|+|+.+.||+++. +.+.|+||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            458999999999999987 66889999865

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG4258|consensus

Probab=95.52  E-value=0.0032  Score=65.62  Aligned_cols=29  Identities=21%  Similarity=0.392  Sum_probs=24.2

Q ss_pred             cCCCCCeeEecCCCCCCCCCCCCCCCCCC
Q psy14889          6 SVNVGQFTIQCCDGDFCNNGSFPILPPSY   34 (443)
Q Consensus         6 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~   34 (443)
                      +.+.|.|++.-..+++-+||+++.++-+.
T Consensus       893 ~l~~G~y~~~vratSlaGng~~t~~~~~~  921 (1025)
T KOG4258|consen  893 RLNPGNYSVRVRATSLAGNGSWTESVIFY  921 (1025)
T ss_pred             ecCCCcEEEEEEEEeeccCCCCcCCcceE
Confidence            45679999999999999999998865443

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.49  E-value=0.12  Score=48.82  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=25.8

Q ss_pred             CCCeEEeCCCCCCEEEcCCCc-EEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGT-CVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~-~kl~DfGla~  289 (443)
                      .+.++|+|+.+.|||+++++. .-|.||+.+.
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            457899999999999997554 5699999873

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.31  E-value=0.24  Score=44.93  Aligned_cols=78  Identities=21%  Similarity=0.187  Sum_probs=46.0

Q ss_pred             cccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhcc---CCCceeeeeeccccCCcccEEEeeecc
Q psy14889        139 SLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~---H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      +..+.+.-|.--..|+..+....+-||+-.......+..|  +..+..+.   .-++.+++.+....    ..-|+|+||
T Consensus        19 ~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AE--a~gL~~la~s~ti~VP~vi~~G~~~----~~sylVle~   92 (286)
T COG3001          19 KEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAE--ADGLELLARSNTITVPKVIAVGASR----DHSYLVLEY   92 (286)
T ss_pred             hcccccCCccccceeEeecCCcceEEEecchhhHHHHHHH--HHHHHHHHhcCCccccceEEecCCC----CeeEEEEee
Confidence            3344555565666676666778899997544333444444  33333233   33455555554444    457999999


Q ss_pred             cCcccHH
Q psy14889        216 HSFGSLY  222 (443)
Q Consensus       216 ~~~gsL~  222 (443)
                      .+.|.+.
T Consensus        93 L~~~~~d   99 (286)
T COG3001          93 LPTGPLD   99 (286)
T ss_pred             ccCCCCC
Confidence            9887664

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=95.08  E-value=0.0023  Score=40.27  Aligned_cols=32  Identities=16%  Similarity=0.335  Sum_probs=21.8

Q ss_pred             cchhhhhhHHhHHHHHHHHHHHHHHHHHHHHh
Q psy14889         44 YDYILKLSMAILGPVIVLGMLAAVIVLFMRRN   75 (443)
Q Consensus        44 ~~~~~~i~~~i~~~~~~l~~~~~~~~~~~~~~   75 (443)
                      ++....|+++++++++++++++++++++.|||
T Consensus         7 ~~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR   38 (40)
T PF08693_consen    7 NSNTVAIAVGVVVPVGVIIIVLGAFLFFWYRR   38 (40)
T ss_pred             CCceEEEEEEEEechHHHHHHHHHHhheEEec
Confidence            34555678888888888877776666654444

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG1236|consensus

Probab=94.98  E-value=0.065  Score=52.45  Aligned_cols=62  Identities=23%  Similarity=0.256  Sum_probs=45.5

Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      ..|+-+|+.+-++..+++....++.-..+++.--+.|+.-+----       +.+|.|+.|.||++.-+
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vD-------NFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVD-------NFVHADLHPGNVLIRFN  381 (565)
T ss_pred             ceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhh-------cceecccCCCcEEEEec
Confidence            467778999999999998777777666666665566654332211       78999999999999543

>PRK12396 5-methylribose kinase; Reviewed

Probab=94.84  E-value=0.27  Score=48.59  Aligned_cols=79  Identities=18%  Similarity=-0.036  Sum_probs=46.9

Q ss_pred             cceeeeecCeEEEEEEEC--CceeEEEEeec----c-----CccchHHHHHHHHHHhccCC-CceeeeeeccccCCcccE
Q psy14889        141 SECIGKGRYGEVWRGVWH--GENVAVKIFFS----R-----DEASWSRETEIYSTVLLRHE-NILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~----~-----~~~~~~~e~ei~~~~~l~H~-nIv~l~g~~~~~~~~~~~  208 (443)
                      .+.||-|.-..||++...  ++.|+||.-..    .     ...+...|.+++....---| .+.+++.+-.+.      
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~------  107 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVM------  107 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHH------
Confidence            467899999999999974  67899996421    1     11233446555554321223 455666653222      


Q ss_pred             EEeeecccCc-ccHHHHh
Q psy14889        209 LWLVTHYHSF-GSLYDHL  225 (443)
Q Consensus       209 ~~lv~e~~~~-gsL~~~l  225 (443)
                      ..+|||+++. ..|.+.|
T Consensus       108 ~~~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        108 NCCVMEDLSDHTILRTAL  125 (409)
T ss_pred             hhHHHHhCcccHHHHHHH
Confidence            3689999854 2344443

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.82  E-value=0.061  Score=51.92  Aligned_cols=72  Identities=21%  Similarity=0.262  Sum_probs=54.7

Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+.|++|++.. ++|..   ...-.+++.+.++.+.++-++-+...       .+.=|||+.-.||||+ +|.+.|+||-
T Consensus       299 ~y~yl~~kdhg-t~is~---ik~~~~~e~lsff~s~~sil~~lekk-------f~fehrnlt~~niLId-~GnvtLIDfk  366 (488)
T COG5072         299 LYLYLHFKDHG-TPISI---IKADRSEEELSFFWSCISILDILEKK-------FPFEHRNLTLDNILID-EGNVTLIDFK  366 (488)
T ss_pred             eEEEEEEecCC-ceeee---eecccHHHHHHHHHHHHHHHhhhhhc-------CCcccccccccceeee-cCceEEEEee
Confidence            45677887752 34332   13356888899999888766666554       2789999999999999 9999999999


Q ss_pred             Cccc
Q psy14889        287 LAVS  290 (443)
Q Consensus       287 la~~  290 (443)
                      +++.
T Consensus       367 lsRl  370 (488)
T COG5072         367 LSRL  370 (488)
T ss_pred             eeec
Confidence            9974

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.76  E-value=0.39  Score=46.51  Aligned_cols=143  Identities=14%  Similarity=0.123  Sum_probs=78.3

Q ss_pred             eeeecCeEEEEEEECCceeEEEEeecc-CccchHHHHHHHHHHh-----ccCCCceeeeeeccccCCcccEEEeeecccC
Q psy14889        144 IGKGRYGEVWRGVWHGENVAVKIFFSR-DEASWSRETEIYSTVL-----LRHENILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       144 lG~G~fg~Vy~~~~~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~-----l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      |.+ .-..+|+....+..+++|+.... .......|.+.+....     +--| +..+=|-....-....+.+-+.+|++
T Consensus        34 l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~  111 (331)
T COG2334          34 LNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLP  111 (331)
T ss_pred             ccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecC
Confidence            444 44578988886666699987664 3333334444433321     0112 22222222211110025678889998


Q ss_pred             cccHHH-H-----------h---c----c---------cCCCHHH-------------HHHHHHHHHHHHHHHHHchhcC
Q psy14889        218 FGSLYD-H-----------L---N----R---------TTLNHHQ-------------MMKICLSIVNGLVHLHTEIFGT  256 (443)
Q Consensus       218 ~gsL~~-~-----------l---~----~---------~~l~~~~-------------~~~i~~qia~gL~yLH~~~~~~  256 (443)
                      |..+.. .           +   +    +         ....|..             -.....++...++.+.+.....
T Consensus       112 G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~  191 (331)
T COG2334         112 GRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAH  191 (331)
T ss_pred             CcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhh
Confidence            877662 1           1   0    0         0123320             0123445566666666653322


Q ss_pred             CCCCC--eEEeCCCCCCEEEcCCCc-EEEEecCCc
Q psy14889        257 QGKPA--IAHRDIKSKNILVKTNGT-CVIADFGLA  288 (443)
Q Consensus       257 ~~~~~--iiHrDlk~~NiLl~~~~~-~kl~DfGla  288 (443)
                      ....+  +||+|+.|.||+++.+.. +.+.||+-+
T Consensus       192 lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         192 LPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             CCcccceeeecCCCccceeEcCCCCeeeEEEcccc
Confidence            22223  999999999999999884 899999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	443
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		1e-131
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-129
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-129
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		1e-123
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		1e-115
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-113
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		1e-113
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		1e-112
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		1e-112
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-112
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		1e-111
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-58
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		6e-55
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		5e-48
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-23
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-23
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-21
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-21
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-21
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-20
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		9e-19
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-18
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-18
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-18
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-18
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-18
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-18
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		7e-18
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		9e-18
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-17
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-17
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-17
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-17
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-17
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-17
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-17
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-17
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-17
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-17
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		6e-17
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		6e-17
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-16
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-16
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		4e-16
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-15
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-15
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-15
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-15
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-14
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-14
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		7e-14
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-13
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-13
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-13
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-13
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-13
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-13
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-13
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-13
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-13
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-13
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-13
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-13
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-13
3iok_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		6e-13
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-13
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		7e-13
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		7e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		8e-13
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		8e-13
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		9e-13
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-13
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-12
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-12
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-12
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-12
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-12
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-12
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-12
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-12
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-12
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-12
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-12
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-12
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-12
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-12
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-12
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-12
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		4e-12
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-12
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-12
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-12
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-12
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		4e-12
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-12
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-12
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-12
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-12
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		5e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-12
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-12
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		6e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-12
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		7e-12
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		8e-12
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		9e-12
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		9e-12
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-11
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-11
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-11
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-11
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-11
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-11
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-11
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-11
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-11
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-11
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-11
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-11
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-11
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-11
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-11
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-11
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-11
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-11
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-11
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-11
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-11
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-11
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-11
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-11
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-11
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-11
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-11
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-11
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-11
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-11
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-11
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-11
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-11
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-11
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-11
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-11
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-11
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-11
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-11
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-11
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-11
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-11
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-11
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-11
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-11
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-11
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-11
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		5e-11
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		5e-11
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-11
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		6e-11
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-11
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-11
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		7e-11
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-11
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		8e-11
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		8e-11
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-11
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		9e-11
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		9e-11
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		9e-11
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		9e-11
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		9e-11
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		9e-11
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-11
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		9e-11
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-10
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-10
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-10
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-10
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-10
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-10
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-10
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-10
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-10
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-10
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-10
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-10
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-10
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-10
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-10
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-10
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-10
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-10
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-10
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-10
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-10
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-10
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-10
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		4e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		4e-10
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		5e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		6e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		6e-10
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		6e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		6e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		7e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		7e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		7e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		7e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		7e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-10
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		8e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		8e-10
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		9e-10
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-09
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-09
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-09
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-09
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-09
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-09
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-09
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-09
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-09
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-09
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-09
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-09
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-09
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		4e-09
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-09
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		4e-09
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-09
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-09
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-09
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		5e-09
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-09
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-09
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		5e-09
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		5e-09
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		6e-09
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-09
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		6e-09
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-09
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		6e-09
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		7e-09
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		7e-09
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-09
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		8e-09
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		8e-09
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-09
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		9e-09
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		9e-09
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		9e-09
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		9e-09
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-08
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-08
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-08
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-08
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-08
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-08
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-08
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-08
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-08
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-08
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-08
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-08
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-08
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-08
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-08
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-08
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-08
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-08
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-08
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-08
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		2e-08
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-08
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-08
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-08
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		3e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-08
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-08
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-08
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-08
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-08
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-08
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-08
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-08
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-08
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-08
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-08
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-08
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-08
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-08
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-08
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-08
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-08
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		5e-08
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		5e-08
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		5e-08
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-08
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		5e-08
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-08
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		5e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		5e-08
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-08
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		5e-08
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		6e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		6e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-08
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		6e-08
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		6e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-08
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		7e-08
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		7e-08
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-08
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		7e-08
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-08
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-08
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-08
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-08
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		8e-08
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		8e-08
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-08
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		8e-08
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		8e-08
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		8e-08
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-08
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		8e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		8e-08
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		8e-08
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		9e-08
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		9e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		9e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		9e-08
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		9e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		9e-08
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-08
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-08
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-07
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-07
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-07
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-07
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-07
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-07
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		1e-07
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-07
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		1e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-07
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-07
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-07
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-07
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-07
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-07
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-07
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-07
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-07
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-07
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-07
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-07
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-07
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-07
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-07
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-07
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-07
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-07
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-07
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-07
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-07
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-07
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-07
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-07
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-07
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-07
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-07
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-07
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-07
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-07
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		3e-07
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-07
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-07
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-07
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-07
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-07
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-07
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-07
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-07
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		4e-07
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		4e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-07
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		4e-07
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-07
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-07
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-07
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-07
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		5e-07
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		5e-07
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		5e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		5e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		5e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		6e-07
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		6e-07
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-07
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		6e-07
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-07
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		7e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-07
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		7e-07
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		7e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		7e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-07
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		8e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-07
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		8e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		8e-07
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		8e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		8e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-07
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		8e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-07
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		8e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		8e-07
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		8e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		8e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		8e-07
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		8e-07
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		8e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		8e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		8e-07
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		8e-07
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		8e-07
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		9e-07
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		9e-07
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		9e-07
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		9e-07
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		9e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		9e-07
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		9e-07
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-06
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-06
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-06
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		1e-06
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-06
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-06
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-06
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-06
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-06
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-06
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-06
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-06
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-06
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-06
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-06
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-06
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-06
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-06
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-06
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-06
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-06
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-06
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-06
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-06
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		5e-06
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		5e-06
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		5e-06
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		5e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-06
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-06
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-06
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-06
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		6e-06
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		6e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		6e-06
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		6e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		6e-06
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		7e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		7e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		7e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		7e-06
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		7e-06
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		8e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-06
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		8e-06
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		8e-06
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		8e-06
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		8e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-06
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		8e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		9e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		9e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-06
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		9e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-05
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-05
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		4e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		5e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		7e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		7e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		8e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		8e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		8e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		8e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		9e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		9e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-05
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		9e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-04
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-04
3gni_B	389	Structure Of Strad And Mo25 Length = 389		1e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		3e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		3e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-04
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		4e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-04
3soa_A	444	Full-Length Human Camkii Length = 444		4e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-04
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-04
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		5e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-04
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-04
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		6e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		6e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		7e-04
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		7e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		7e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		9e-04

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score =  464 bits (1193), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 212/321 (66%), Positives = 260/321 (80%)
Query: 108 STLREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIF 167
           STL + LD              +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF
Sbjct: 9   STLADLLDHSCTSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIF 68
Query: 168 FSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR 227
            SRDE SW RETE+Y+TV+LRHENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  
Sbjct: 69  SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL 128
Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
           TTL+    ++I LSI +GL HLH EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GL
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           AV +SQ +N++D+  NPRVGTKRYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
Query: 348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKEC 407
             +NGI E+YK P++D+VP DPSF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKEC
Sbjct: 249 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 308
Query: 408 WHQNANVRLSALRVKKTLIKL 428
           W+QN + RL+ALR+KKTL K+
Sbjct: 309 WYQNPSARLTALRIKKTLTKI 329

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 207/299 (69%), Positives = 253/299 (84%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct: 2   MQRTVAHQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/299 (68%), Positives = 253/299 (84%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A+ I+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct: 2   MQRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score =  437 bits (1123), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 196/300 (65%), Positives = 245/300 (81%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A+Q++L EC+GKGRYGEVWRG+WHGE+VAVKIF SRDE SW RETEIY+TVLLRH
Sbjct: 2   MQRTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           +NILG+I SDMTSRNS TQLWL+THYH  GSLYD L R TL  H  +++ +S   GL HL
Sbjct: 62  DNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EIFGTQGKPAIAHRD KS+N+LVK+N  C IAD GLAV +SQ S+ +DI  NPRVGTK
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LDE I  DCFES+K  DI+A GLVLWE+ RRT  NGI E+Y+ P++D+VP DP
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           SF+DM+KV+C+DQQ P +PNR  +D  L+ + ++M+ECW+ N + RL+ALR+KKTL K++
Sbjct: 242 SFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKIS 301

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 190/300 (63%), Positives = 233/300 (77%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+AKQI + + IGKGRYGEVW G W GE VAVK+FF+ +EASW RETEIY TVL+RH
Sbjct: 31  VQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRH 90
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I +D+    S TQL+L+T YH  GSLYD+L  TTL+   M+K+  S V+GL HL
Sbjct: 91  ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           HTEIF TQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   +N++DIPPN RVGTK
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM PE+LDES+N + F+S+  AD+Y+ GL+LWEV RR  + GI EEY+ PYHDLVP DP
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           S++DMR+++CI + RP  PNRW SD  L  M K+M ECW  N   RL+ALRVKKTL K++
Sbjct: 271 SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/300 (62%), Positives = 229/300 (76%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRH
Sbjct: 23  VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH 82
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HL
Sbjct: 83  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 142
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EI GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTK
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DP
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 262
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           S ++MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 322

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/300 (62%), Positives = 229/300 (76%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRH
Sbjct: 36  VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH 95
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HL
Sbjct: 96  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EI GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTK
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DP
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           S ++MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 6   TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 65
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           LG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH E
Sbjct: 66  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 245
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 246 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 302

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 3   TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           LG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH E
Sbjct: 63  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS +
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 242
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 243 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 299

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
           T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 1   TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           LG+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH E
Sbjct: 61  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 240
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 241 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 297

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/296 (62%), Positives = 225/296 (76%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL 193
           +A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENIL
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH EI
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
            GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS ++
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/284 (40%), Positives = 178/284 (62%), Gaps = 6/284 (2%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           + L E   +GR+G VW+     E VAVKIF  +D+ SW  E E+YS   ++HENIL +IG
Sbjct: 26  LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           ++    +    LWL+T +H  GSL D L    ++ +++  I  ++  GL +LH +I G +
Sbjct: 86  AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 258 G--KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
              KPAI+HRDIKSKN+L+K N T  IADFGLA+ +    +  D   + +VGT+RYM+PE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT--HGQVGTRRYMAPE 203
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR-TKANGIFEEYKAPYHDLVPMDPSFDDM 374
           +L+ +IN    ++F + D+YA+GLVLWE+  R T A+G  +EY  P+ + +   PS +DM
Sbjct: 204 VLEGAINFQ-RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262
Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           ++V+   ++RPVL + W   + +  + + ++ECW  +A  RLSA
Sbjct: 263 QEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score =  211 bits (537), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 176/285 (61%), Gaps = 7/285 (2%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           + L E   +GR+G VW+     + VAVKIF  +D+ SW  E EI+ST  ++HEN+L +I 
Sbjct: 17  LQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           ++    N   +LWL+T +H  GSL D+L    +  +++  +  ++  GL +LH ++   +
Sbjct: 77  AEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 258 G---KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
           G   KP+IAHRD KSKN+L+K++ T V+ADFGLAV +       D   + +VGT+RYM+P
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDT--HGQVGTRRYMAP 194
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTK-ANGIFEEYKAPYHDLVPMDPSFDD 373
           E+L+ +IN    ++F + D+YA+GLVLWE+  R K A+G  +EY  P+ + +   PS ++
Sbjct: 195 EVLEGAINFQ-RDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEE 253
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           +++V+   + RP + + W+    L  +   ++ECW  +A  RLSA
Sbjct: 254 LQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSA 298

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 174/304 (57%), Gaps = 15/304 (4%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI- 196
           + L E IG+GRYG V++G      VAVK+F   +  ++  E  IY   L+ H+NI  +I 
Sbjct: 15  LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI-FG 255
           G +  + +   +  LV  Y+  GSL  +L+  T +     ++  S+  GL +LHTE+  G
Sbjct: 75  GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP------RVGTK 309
              KPAI+HRD+ S+N+LVK +GTCVI+DFGL++  +   N++  P          VGT 
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT--GNRLVRPGEEDNAAISEVGTI 192
Query: 310 RYMSPEILDESINMDCFES-FKKADIYALGLVLWEV---CRRTKANGIFEEYKAPYHDLV 365
           RYM+PE+L+ ++N+   ES  K+ D+YALGL+ WE+   C          EY+  +   V
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDS-TLNAMTKVMKECWHQNANVRLSALRVKKT 424
              P+F+DM+ ++  ++QRP  P  W  +S  + ++ + +++CW Q+A  RL+A   ++ 
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312
Query: 425 LIKL 428
           + +L
Sbjct: 313 MAEL 316

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENIL 193
           +++ E IG G +G V R  WHG +VAVKI   +D  +  R  E    V     LRH NI+
Sbjct: 39  LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV 97
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHL 249
            ++G+     N    L +VT Y S GSLY  L+    R  L+  + + +   +  G+ +L
Sbjct: 98  LFMGAVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H         P I HRD+KS N+LV    T  + DFGL    S+L     +      GT 
Sbjct: 154 HNR------NPPIVHRDLKSPNLLVDKKYTVKVCDFGL----SRLKASXFLXSKXAAGTP 203
Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            +M+PE+L DE  N       +K+D+Y+ G++LWE+ 
Sbjct: 204 EWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENIL 193
           +++ E IG G +G V R  WHG +VAVKI   +D  +  R  E    V     LRH NI+
Sbjct: 39  LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV 97
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHL 249
            ++G+     N    L +VT Y S GSLY  L+    R  L+  + + +   +  G+ +L
Sbjct: 98  LFMGAVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H         P I HR++KS N+LV    T  + DFGL    S+L     +      GT 
Sbjct: 154 HNR------NPPIVHRNLKSPNLLVDKKYTVKVCDFGL----SRLKASTFLSSKSAAGTP 203
Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
            +M+PE+L DE  N       +K+D+Y+ G++LWE+ 
Sbjct: 204 EWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 12  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 71  LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 128 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-------VKWT 172
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE L E+     F +  K+D+++ G++LWE+     + G     + P  D+VP      
Sbjct: 173 APEALREA----AFST--KSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 217
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
            + K   +D            D    A+ +VMK CWH +A +R S L++++ L  +   +
Sbjct: 218 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266
Query: 433 MYI 435
           +++
Sbjct: 267 LHL 269

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 6   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 65  LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 122 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-------KWT 166
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE L E       +   K+D+++ G++LWE+     + G     + P  D+VP      
Sbjct: 167 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 211
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
            + K   +D            D    A+ +VMK CWH +A +R S L++++ L  +   +
Sbjct: 212 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260
Query: 433 MYI 435
           +++
Sbjct: 261 LHL 263

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 80  LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 137 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-------KWT 181
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE L E       +   K+D+++ G++LWE+     + G     + P  D+VP      
Sbjct: 182 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 226
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
            + K   +D            D    A+ +VMK CWH +A +R S L++++ L  +   +
Sbjct: 227 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
Query: 433 MYI 435
           +++
Sbjct: 276 LHL 278

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 252 LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 309 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-------VKWT 353
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE L E       +   K+D+++ G++LWE+     + G     + P  D+VP      
Sbjct: 354 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 398
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
            + K   +D            D    A+  VMK CWH +A  R + L++++ L  +   +
Sbjct: 399 -VEKGYKMD----------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
Query: 433 MYI 435
           +++
Sbjct: 448 LHL 450

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD---EASWSRETEIYSTVLLRHEN 191
           A ++ LS  IG G +G V++G WHG+ VAVKI    D   E   +   E+      RH N
Sbjct: 35  ASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           IL ++G  MT  N    L +VT +    SLY HL+   T     Q++ I      G+ +L
Sbjct: 94  ILLFMGY-MTKDN----LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H +         I HRD+KS NI +    T  I DFGLA   S+ S    +      G+ 
Sbjct: 149 HAK--------NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV--EQPTGSV 198
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
            +M+PE++  +  N   F+S    D+Y+ G+VL+E+
Sbjct: 199 LWMAPEVIRMQDNNPFSFQS----DVYSYGIVLYEL 230

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG +VAVK+        +   + + E+      RH NIL
Sbjct: 25  QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL  + T     +++ I      G+ +LH 
Sbjct: 84  LFMGY-----STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 139 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 188
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 189 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 218

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 36/230 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 33  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E     
Sbjct: 93  SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+  +G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
            +S     ++S  KADI++LG+   E+ R           + P+ +L PM
Sbjct: 197 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPM 230

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 25  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL  + T     +++ I      G+ +LH 
Sbjct: 84  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 139 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 188
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 189 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 218

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 36/230 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E     
Sbjct: 88  SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+  +G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVI 191
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
            +S     ++S  KADI++LG+   E+ R           + P+ +L PM
Sbjct: 192 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPM 225

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 13  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E     
Sbjct: 73  SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 123
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+  +G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 176
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
            +S     ++S  KADI++LG+   E+ R           + P+ +L PM   F
Sbjct: 177 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPMKVLF 214

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
           E IGKG +GEV++G+ +     VA+KI    +      + +   TVL + ++  +  Y G
Sbjct: 13  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           S +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E     
Sbjct: 73  SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 123
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
                 HRDIK+ N+L+  +G   +ADFG+A    QL++   I  N  VGT  +M+PE++
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVI 176
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
            +S     ++S  KADI++LG+   E+ R           + P+ +L PM   F
Sbjct: 177 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPMKVLF 214

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 13  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL  + T     +++ I      G+ +LH 
Sbjct: 72  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 127 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 176
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 177 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 206

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           R  A    L E +G G YG+V++G  V  G+  A+K+     + +   E EI   + +  
Sbjct: 20  RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLK 75
Query: 188 ---RHENILGYIGSDMTSRNSC--TQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKIC 239
               H NI  Y G+ +         QLWLV  +   GS+ D +  T   TL    +  IC
Sbjct: 76  KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             I+ GL HLH           + HRDIK +N+L+  N    + DFG++    +   +  
Sbjct: 136 REILRGLSHLHQH--------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR- 186
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
              N  +GT  +M+PE++    N D    F K+D+++LG+   E+           E   
Sbjct: 187 ---NTFIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEMA----------EGAP 232
Query: 360 PYHDLVPMDPSF 371
           P  D+ PM   F
Sbjct: 233 PLCDMHPMRALF 244

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 68  LFMGY-----STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 68  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 29  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 88  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 143 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 192
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 193 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 222

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 37  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 96  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 151 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 200
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 201 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 230

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 14  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 73  LFMG-----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 128 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 177
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 178 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 207

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 68  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 11  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 70  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 125 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 174
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 175 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 204

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 36  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 95  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 150 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 199
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 200 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 229

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 37  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 96  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 151 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 200
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 201 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 230

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+        +   + + E+      RH NIL
Sbjct: 14  QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G      ++  QL +VT +    SLY HL+   T     +++ I      G+ +LH 
Sbjct: 73  LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +        +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 128 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 177
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
           M+PE++  +  N   F+S    D+YA G+VL+E+
Sbjct: 178 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 207

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 54/288 (18%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           E +G+G YG V++ +    G+ VA+K +    D     +E  I       H  ++ Y GS
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPH--VVKYYGS 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
              +    T LW+V  Y   GS+ D   L   TL   ++  I  S + GL +LH   F  
Sbjct: 93  YFKN----TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
           +      HRDIK+ NIL+ T G   +ADFG+A    QL++ M    N  +GT  +M+PE+
Sbjct: 146 K-----IHRDIKAGNILLNTEGHAKLADFGVA---GQLTDXM-AKRNXVIGTPFWMAPEV 196
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
           + E I  +C      ADI++LG+   E+           E K PY D+ P       MR 
Sbjct: 197 IQE-IGYNCV-----ADIWSLGITAIEMA----------EGKPPYADIHP-------MRA 233
Query: 377 VICIDQQRPVL---PNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV 421
           +  I    P     P  W SD+     T  +K+C  ++   R +A ++
Sbjct: 234 IFMIPTNPPPTFRKPELW-SDN----FTDFVKQCLVKSPEQRATATQL 276

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHEN 191
           +Q+ + E IGKGR+G+V+ G WHGE     I   RD      ++ RE   Y     RHEN
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT--RHEN 90
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++ ++G+ M    S   L ++T      +LY  +   +  L+ ++  +I   IV G+ +L
Sbjct: 91  VVLFMGACM----SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-AVSYSQLSNKMDIPPNPRVGT 308
           H +         I H+D+KSKN+    NG  VI DFGL ++S    + + +     + G 
Sbjct: 147 HAK--------GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 309 KRYMSPEI---LDESINMDCFESFKKADIYALGLVLWEVCRR 347
             +++PEI   L      D     K +D++ALG + +E+  R
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           E IGKG +GEV++G+ +   + VA+KI    +      + +   TVL + ++   Y+   
Sbjct: 29  ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--SYVTKY 86
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
             S    ++LW++  Y   GS  D L     +  Q+  +   I+ GL +LH+E       
Sbjct: 87  YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE------- 139
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE 319
               HRDIK+ N+L+   G   +ADFG+A    QL++   I  N  VGT  +M+PE++ +
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVIQQ 194
Query: 320 SINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
           S     ++S  KADI++LG+   E+ +    N
Sbjct: 195 S----AYDS--KADIWSLGITAIELAKGEPPN 220

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIGSD 199
           IGKG +GEV++G+ +   E VA+KI    +      + +   TVL + ++  I  Y GS 
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
           + S    T+LW++  Y   GS  D L    L    +  I   I+ GL +LH+E       
Sbjct: 87  LKS----TKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE------- 135
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE 319
               HRDIK+ N+L+   G   +ADFG+A    QL++   I  N  VGT  +M+PE++ +
Sbjct: 136 -RKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVIKQ 190
Query: 320 SINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
           S        F KADI++LG+   E+ +    N
Sbjct: 191 SAY-----DF-KADIWSLGITAIELAKGEPPN 216

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K+I + E +G+G +G V +  W  ++VA+K   S  E   +   E+     + H NI+  
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 67
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHLHT 251
            G+ +        + LV  Y   GSLY+ L+             M  CL    G+ +LH+
Sbjct: 68  YGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLA--VSYSQLSNKMDIPPNPRVGT 308
                Q K A+ HRD+K  N+L+   GT + I DFG A  +     +NK         G+
Sbjct: 122 ----MQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---------GS 167
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             +M+PE+ + S         +K D+++ G++LWEV  R K    F+E   P   +  M 
Sbjct: 168 AAWMAPEVFEGS------NYSEKCDVFSWGIILWEVITRRKP---FDEIGGPAFRI--MW 216
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
              +  R  +  +  +P+                +M  CW ++ + R S   + K +  L
Sbjct: 217 AVHNGTRPPLIKNLPKPI--------------ESLMTRCWSKDPSQRPSMEEIVKIMTHL 262

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K+I + E +G+G +G V +  W  ++VA+K   S  E   +   E+     + H NI+  
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 66
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHLHT 251
            G+ +        + LV  Y   GSLY+ L+             M  CL    G+ +LH+
Sbjct: 67  YGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLA--VSYSQLSNKMDIPPNPRVGT 308
                Q K A+ HRD+K  N+L+   GT + I DFG A  +     +NK         G+
Sbjct: 121 ----MQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---------GS 166
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             +M+PE+ + S         +K D+++ G++LWEV  R K    F+E   P   +  M 
Sbjct: 167 AAWMAPEVFEGS------NYSEKCDVFSWGIILWEVITRRKP---FDEIGGPAFRI--MW 215
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
              +  R  +  +  +P+                +M  CW ++ + R S   + K +  L
Sbjct: 216 AVHNGTRPPLIKNLPKPI--------------ESLMTRCWSKDPSQRPSMEEIVKIMTHL 261

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G +G V++G  +   VAVK     +  + +E     + EI      +HEN++  +G 
Sbjct: 39  MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                + C    LV  Y   GSL D L+       L+ H   KI     NG+  LH    
Sbjct: 99  SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRDIKS NIL+    T  I+DFGLA +  + +    +  +  VGT  YM+P
Sbjct: 155 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--VMXSRIVGTTAYMAP 204
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E L   I         K+DIY+ G+VL E+     A    +E++ P   L+       + 
Sbjct: 205 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 252
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
            +    D     + +   +DST + AM  V  +C H+  N R    +V++ L ++  +
Sbjct: 253 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G +G V++G  +   VAVK     +  + +E     + EI      +HEN++  +G 
Sbjct: 33  MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                + C    LV  Y   GSL D L+       L+ H   KI     NG+  LH    
Sbjct: 93  SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRDIKS NIL+    T  I+DFGLA +  + +    +     VGT  YM+P
Sbjct: 149 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX--VMXXRIVGTTAYMAP 198
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E L   I         K+DIY+ G+VL E+     A    +E++ P   L+       + 
Sbjct: 199 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 246
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
            +    D     + +   +DST + AM  V  +C H+  N R    +V++ L ++  +
Sbjct: 247 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G +G V++G  +   VAVK     +  + +E     + EI      +HEN++  +G 
Sbjct: 39  MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                + C    LV  Y   GSL D L+       L+ H   KI     NG+  LH    
Sbjct: 99  SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRDIKS NIL+    T  I+DFGLA +  + +    +     VGT  YM+P
Sbjct: 155 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--VMXXRIVGTTAYMAP 204
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E L   I         K+DIY+ G+VL E+     A    +E++ P   L+       + 
Sbjct: 205 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 252
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
            +    D     + +   +DST + AM  V  +C H+  N R    +V++ L ++  +
Sbjct: 253 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF-------FSRDEASWSRETEIYSTVLLRH 189
           +++L E IG G +G+V+R  W G+ VAVK          S+   +  +E ++++  +L+H
Sbjct: 8   ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA--MLKH 65
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
            NI+   G  +   N C    LV  +   G L   L+   +    ++   + I  G+ +L
Sbjct: 66  PNIIALRGVCLKEPNLC----LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILV--------KTNGTCVIADFGLAVSYSQLSNKMDIP 301
           H E         I HRD+KS NIL+         +N    I DFGLA  + + + KM   
Sbjct: 122 HDEAI-----VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMS-- 173
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
                G   +M+PE++  S+        K +D+++ G++LWE+             + P+
Sbjct: 174 ---AAGAYAWMAPEVIRASM------FSKGSDVWSYGVLLWELLTG----------EVPF 214
Query: 362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             +       D +     +   +  LP   +  +      K+M++CW+ + + R S
Sbjct: 215 RGI-------DGLAVAYGVAMNKLALP---IPSTCPEPFAKLMEDCWNPDPHSRPS 260

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V   R    G  VAVK+   R +    RE      V++R   H N++    S
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW++  +   G+L D +++  LN  Q+  +C +++  L +LH +      
Sbjct: 111 YLVGE----ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ------ 160
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
              + HRDIKS +IL+  +G   ++DFG     S+     D+P     VGT  +M+PE++
Sbjct: 161 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-----DVPKRKXLVGTPYWMAPEVI 213
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
             S+         + DI++LG+++ E+ 
Sbjct: 214 SRSLYA------TEVDIWSLGIMVIEMV 235

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 145 GKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           G+G +G V++G  +   VAVK     +  + +E     + EI      +HEN++  +G  
Sbjct: 31  GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               + C    LV  Y   GSL D L+       L+ H   KI     NG+  LH     
Sbjct: 91  SDGDDLC----LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                   HRDIKS NIL+    T  I+DFGLA +  + +    +  +  VGT  Y +PE
Sbjct: 146 -------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX--VXXSRIVGTTAYXAPE 196
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
            L   I         K+DIY+ G+VL E+     A    +E++ P
Sbjct: 197 ALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP 231

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 45/240 (18%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   H+N++    S
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CLS++  L +LH +      
Sbjct: 111 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ------ 160
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
              + HRDIKS +IL+ ++G   ++DFG     S+     ++P     VGT  +M+PE++
Sbjct: 161 --GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-----EVPKRKXLVGTPYWMAPEVI 213
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKV 377
                        + DI++LG+++ E+           + + PY +    +P    MR++
Sbjct: 214 SR------LPYGTEVDIWSLGIMVIEMI----------DGEPPYFN----EPPLQAMRRI 253

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 52/289 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS-RETEIYSTV-----LLRH 189
           KQ++    + +   GE+W+G W G ++ VK+   RD   WS R++  ++       +  H
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSH 66
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGL 246
            N+L  +G+  +         L+TH+  +GSLY+ L+  T   ++  Q +K  L +  G+
Sbjct: 67  PNVLPVLGACQSP--PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             LHT       +P I    + S+++++  + T  I+   +  S+ Q   +M  P     
Sbjct: 125 AFLHTL------EPLIPRHALNSRSVMIDEDMTARISMADVKFSF-QSPGRMYAP----- 172
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
               +++PE L +        + + AD+++  ++LWE+  R          + P+ DL  
Sbjct: 173 ---AWVAPEALQKKPE---DTNRRSADMWSFAVLLWELVTR----------EVPFADLSN 216
Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           M+         + ++  RP +P           ++K+MK C +++   R
Sbjct: 217 MEIGMK-----VALEGLRPTIP-----PGISPHVSKLMKICMNEDPAKR 255

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 78  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SEMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 78  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 78  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SXMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 21  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 78
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 79  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 135 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SXMVGTPY 182
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 183 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 210

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 98
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 99  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 157 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 207
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 208 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 254
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 255 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 312
Query: 418 -ALRVKKTLIKLA 429
            ALRV +   ++A
Sbjct: 313 LALRVDQIRDQMA 325

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 8   RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 65
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 66  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 124 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 174
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 175 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 221
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 222 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 279
Query: 418 -ALRVKKTLIKLA 429
            ALRV +   ++A
Sbjct: 280 LALRVDQIRDQMA 292

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 16  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 76  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL  S     +    P   +   K
Sbjct: 129 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAPAGAKFPIK 178
Query: 310 RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
            + +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 -WTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 207

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 77  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL  S     +    P   +   K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAPAGAKFPIK 179
Query: 310 RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
            + +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 180 -WTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 14  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 72  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 130 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 180
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 181 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 227
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 228 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 285
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 286 LALRVDQIRDNMA 298

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 68  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 282 LALRVDQIRDNMA 294

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 16  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 73
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 74  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 132 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 182
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 183 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 229
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 230 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 287
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 288 LALRVDQIRDNMA 300

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 15  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 72
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 73  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 131 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 181
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 182 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 228
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 229 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 286
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 287 LALRVDQIRDNMA 299

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 17  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 74
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 75  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 133 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 183
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 184 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 230
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 231 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 288
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 289 LALRVDQIRDNMA 301

>pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 28  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 85
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 86  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 144 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 194
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 195 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELFT------YIEKSKSPPAE 241
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 242 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 299
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 300 LALRVDQIRDNMA 312

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 9   RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 66
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 67  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 125 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 175
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 176 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 222
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 223 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 280
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 281 LALRVDQIRDNMA 293

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 68  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 282 LALRVDQIRDNMA 294

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 13  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 70
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 71  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 129 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 180 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 226
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 227 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 285 LALRVDQIRDNMA 297

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 68  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 282 LALRVDQIRDNMA 294

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 94
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 95  YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 144
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
              + HRDIKS +IL+  +G   ++DFG     +Q+S ++     PR    VGT  +M+P
Sbjct: 145 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 194
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
           E++             + DI++LG+++ E+ 
Sbjct: 195 ELISR------LPYGPEVDIWSLGIMVIEMV 219

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 28  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 85
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 86  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 144 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 194
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 195 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 241
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 242 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 299
Query: 418 -ALRVKK 423
            ALRV +
Sbjct: 300 LALRVDQ 306

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 66/294 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 81  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 137 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEETSSVGSK 182
Query: 310 ---RYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
              R+  PE+L        +  F  K+DI+A G+++WE         I+   K PY    
Sbjct: 183 FPVRWSPPEVL-------MYSKFSSKSDIWAFGVLMWE---------IYSLGKMPYE--- 223
Query: 366 PMDPSFDDMRKVICIDQQ----RPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 224 ----RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 265

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 96
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 97  YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 146
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
              + HRDIKS +IL+  +G   ++DFG     +Q+S ++     PR    VGT  +M+P
Sbjct: 147 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 196
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
           E++             + DI++LG+++ E+ 
Sbjct: 197 ELISR------LPYGPEVDIWSLGIMVIEMV 221

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 85
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 86  YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 135
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
              + HRDIKS +IL+  +G   ++DFG     S+     ++P     VGT  +M+PE++
Sbjct: 136 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-----EVPRRKXLVGTPYWMAPELI 188
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
                        + DI++LG+++ E+ 
Sbjct: 189 SR------LPYGPEVDIWSLGIMVIEMV 210

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
           K+ +  E IG+G  G V+    V  G+ VA++    + +    +E  I   +++R     
Sbjct: 21  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 78
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           NI+ Y+ S +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH
Sbjct: 79  NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +          + HR+IKS NIL+  +G+  + DFG     +   +K     +  VGT  
Sbjct: 135 SN--------QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 182
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +M+PE++             K DI++LG++  E+
Sbjct: 183 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 210

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 89
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 90  YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 139
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
              + HRDIKS +IL+  +G   ++DFG     S+     ++P     VGT  +M+PE++
Sbjct: 140 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-----EVPRRKXLVGTPYWMAPELI 192
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
                        + DI++LG+++ E+ 
Sbjct: 193 SR------LPYGPEVDIWSLGIMVIEMV 214

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 216
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 217 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 266
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
              + HRDIKS +IL+  +G   ++DFG     +Q+S ++     PR    VGT  +M+P
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 316
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
           E++             + DI++LG+++ E+ 
Sbjct: 317 ELISR------LPYGPEVDIWSLGIMVIEMV 341

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 59/315 (18%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
           R  AK+I +S     E IG G +GEV RG           VA+K           RE   
Sbjct: 7   REFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 66
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMK 237
            ++++    H NI+   G    S      + ++T +   G+L  +  LN       Q++ 
Sbjct: 67  EASIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 122
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
           +   I +G+ +L         + +  HRD+ ++NILV +N  C ++DFGL+    +  N 
Sbjct: 123 MLRGIASGMRYL--------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE--NS 172
Query: 298 MDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGI 353
            D      +G K   R+ +PE +        F  F  A D ++ G+V+WEV         
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAI-------AFRKFTSASDAWSYGIVMWEVMS------- 218
Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
           F E   PY D+     S  D+   I  D + P  P+         ++ ++M +CW ++ N
Sbjct: 219 FGER--PYWDM-----SNQDVINAIEQDYRLPPPPD------CPTSLHQLMLDCWQKDRN 265
Query: 414 VRLSALRVKKTLIKL 428
            R    +V   L K+
Sbjct: 266 ARPRFPQVVSALDKM 280

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
           IG+G  G V        G+ VAVK    R +    RE      V++R   HEN++    S
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 139
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  +   G+L D +  T +N  Q+  +CL+++  L  LH +      
Sbjct: 140 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 189
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
              + HRDIKS +IL+  +G   ++DFG     +Q+S ++     PR    VGT  +M+P
Sbjct: 190 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 239
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
           E++             + DI++LG+++ E+ 
Sbjct: 240 ELISR------LPYGPEVDIWSLGIMVIEMV 264

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 13  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 70
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  +   ++H ++++    I  
Sbjct: 71  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HRD+ ++NILV+      I DFGL     Q      +   P
Sbjct: 129 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 180 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 226
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 227 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 285 LALRVDQIRDNMA 297

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 81  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 137 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 182
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 183 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 223
Query: 367 MDPSFDDMRKVICIDQQ----RPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 224 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 265

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 61  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 117 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 162
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 163 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 203
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 204 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 245

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 8   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 64
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 65  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 121 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 166
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 167 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 207
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 208 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 249

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 15  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 71
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 72  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 128 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 173
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 174 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 214
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 215 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 256

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 9   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 66  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D      VG+K
Sbjct: 122 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 167
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 168 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 208
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q     RP L +  V          +M  CWH+ A+ R
Sbjct: 209 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 250

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      +V  A K+  ++ E     +  E +I ++    H NI+  + +
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                N    LW++  + + G++      L R  L   Q+  +C   ++ L +LH     
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ NIL   +G   +ADFG++   ++   + D      +GT  +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD----SFIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++    + D    + KAD+++LG+ L E+           E + P+H+L P       MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            ++ I +  P     P+RW S+         +K+C  +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      +V  A K+  ++ E     +  E +I ++    H NI+  + +
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                N    LW++  + + G++      L R  L   Q+  +C   ++ L +LH     
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ NIL   +G   +ADFG++   ++   + D      +GT  +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX----FIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++    + D    + KAD+++LG+ L E+           E + P+H+L P       MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            ++ I +  P     P+RW S+         +K+C  +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      +V  A K+  ++ E     +  E +I ++    H NI+  + +
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                N    LW++  + + G++      L R  L   Q+  +C   ++ L +LH     
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ NIL   +G   +ADFG++   ++   + D      +GT  +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----SFIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++    + D    + KAD+++LG+ L E+           E + P+H+L P       MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            ++ I +  P     P+RW S+         +K+C  +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
            Q T A++ ++   +GKG +GEV +       +  AVK+       ++D ++  RE E+ 
Sbjct: 16  FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
               L H NI+    I  D +S       ++V   ++ G L+D +  R   + H   +I 
Sbjct: 76  KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
             + +G+ ++H        K  I HRD+K +NIL+++        I DFGL+  + Q + 
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             D     R+GT  Y++PE+L  + +  C       D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 62/292 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRE---TEIYSTVLLRHEN 191
           ++I+L + +G G++G V  G W G+ +VAVK+     E S S +    E  + + L H  
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPK 64
Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGL 246
           ++ + G        C++   +++VT Y S G L ++L      L   Q++++C  +  G+
Sbjct: 65  LVKFYGV-------CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             L +  F         HRD+ ++N LV  +    ++DFG+          +D      V
Sbjct: 118 AFLESHQF--------IHRDLAARNCLVDRDLCVKVSDFGMT------RYVLDDQYVSSV 163
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
           GTK   ++ +PE+         F+   K+D++A G+++WEV         F   K PY D
Sbjct: 164 GTKFPVKWSAPEVFH------YFKYSSKSDVWAFGILMWEV---------FSLGKMPY-D 207
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           L      + +   V+ + Q   +      SD+    + ++M  CWH+    R
Sbjct: 208 L------YTNSEVVLKVSQGHRLYRPHLASDT----IYQIMYSCWHELPEKR 249

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 74  YGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S + D+      GT  Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 75  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 128
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S + D+      GT  Y+ P
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 177 EMIEGRMHDE------KVDLWSLGVLCYE 199

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 80  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 162 VAVKIFF----SRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS 217
           VA+K  F     ++E     E E++++  L H+NI+  I  D+   + C   +LV  Y  
Sbjct: 39  VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI--DVDEEDDC--YYLVMEYIE 94
Query: 218 FGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT 276
             +L +++ +   L+    +     I++G+ H H           I HRDIK +NIL+ +
Sbjct: 95  GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH--------DMRIVHRDIKPQNILIDS 146
Query: 277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYA 336
           N T  I DFG+A + S+ S       N  +GT +Y SPE        +C       DIY+
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQ---TNHVLGTVQYFSPEQAKGEATDEC------TDIYS 197
Query: 337 LGLVLWEV 344
           +G+VL+E+
Sbjct: 198 IGIVLYEM 205

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 99
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 100 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S + D+      GT  Y
Sbjct: 153 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDY 198
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 199 LPPEMIEGRMHDE------KVDLWSLGVLCYE 224

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
            Q T A++ ++   +GKG +GEV +       +  AVK+       ++D ++  RE E+ 
Sbjct: 16  FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
               L H NI+    I  D +S       ++V   ++ G L+D +  R   + H   +I 
Sbjct: 76  KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
             + +G+ ++H        K  I HRD+K +NIL+++        I DFGL+  + Q + 
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             D     R+GT  Y++PE+L  + +  C       D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 8   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 66  RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S + D+      
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
            Q T A++ ++   +GKG +GEV +       +  AVK+       ++D ++  RE E+ 
Sbjct: 16  FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
               L H NI+    I  D +S       ++V   ++ G L+D +  R   + H   +I 
Sbjct: 76  KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
             + +G+ ++H        K  I HRD+K +NIL+++        I DFGL+  + Q + 
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             D     R+GT  Y++PE+L  + +  C       D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 19  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 78
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 79  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 132 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 177
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 178 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 210

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 11  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 70  ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 126 MNY--------VHRDLRAANILVGENLVCKVADFGLA 154

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
           IG G +G V+  R V + E VA+K      + S  +  +I   V     LRH N + Y G
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L  ++  L   ++  +    + GL +LH+    
Sbjct: 122 CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 173
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K+ NIL+   G   + DFG        S  +  P N  VGT  +M+PE
Sbjct: 174 -----NMIHRDVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPE 220
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           ++   + MD  +   K D+++LG+   E+  R
Sbjct: 221 VI---LAMDEGQYDGKVDVWSLGITCIELAER 249

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 79  YGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 132
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S + D+      GT  Y+ P
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 180
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 181 EMIEGRMHDE------KVDLWSLGVLCYE 203

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 80  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 80  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 47/262 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS-RETEIYSTV-----LLRH 189
           KQ++    + +   GE+W+G W G ++ VK+   RD   WS R++  ++       +  H
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSH 66
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGL 246
            N+L  +G+  +         L+TH+  +GSLY+ L+  T   ++  Q +K  L    G 
Sbjct: 67  PNVLPVLGACQSP--PAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             LHT       +P I    + S+++ +  + T  I+   +  S+             R 
Sbjct: 125 AFLHTL------EPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPG---------RX 169
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
               +++PE L +        + + AD ++  ++LWE+  R          + P+ DL  
Sbjct: 170 YAPAWVAPEALQKKPED---TNRRSADXWSFAVLLWELVTR----------EVPFADL-- 214
Query: 367 MDPSFDDMRKVICIDQQRPVLP 388
              S  ++   + ++  RP +P
Sbjct: 215 ---SNXEIGXKVALEGLRPTIP 233

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 77  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 175
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 176 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
           IG G +G V+  R V + E VA+K      + S  +  +I   V     LRH N + Y G
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +    +    WLV  Y   GS  D L  ++  L   ++  +    + GL +LH+    
Sbjct: 83  CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K+ NIL+   G   + DFG        S  +  P N  VGT  +M+PE
Sbjct: 135 -----NMIHRDVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPE 181
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           ++   + MD  +   K D+++LG+   E+  R
Sbjct: 182 VI---LAMDEGQYDGKVDVWSLGITCIELAER 210

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
           + +   + +GKG +G V    +       GE VAVK      E     + RE EI  +  
Sbjct: 11  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 68
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L+H+NI+ Y G   ++      L L+  Y  +GSL D+L  ++  ++H ++++    I  
Sbjct: 69  LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L T+ +         HR++ ++NILV+      I DFGL     Q      +   P
Sbjct: 127 GMEYLGTKRY--------IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV-KEP 177
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 + +PE L ES        F  A D+++ G+VL+E+          E+ K+P  +
Sbjct: 178 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 224
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
            + M    +D +  + +     +L N       D   + +  +M ECW+ N N R S   
Sbjct: 225 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 282
Query: 418 -ALRVKKTLIKLA 429
            ALRV +    +A
Sbjct: 283 LALRVDQIRDNMA 295

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V    +       GE VAVK   +    +  + W +E +I  T  L HE+I+
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT--LYHEHII 96
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            Y G           L LV  Y   GSL D+L R ++   Q++     I  G+ +LH + 
Sbjct: 97  KYKGC--CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
           +         HRD+ ++N+L+  +    I DFGLA +  +      +  +       Y +
Sbjct: 155 Y--------IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-A 205
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE L E      ++ +  +D+++ G+ L+E+     ++   +     + +L+ +      
Sbjct: 206 PECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELIGIAQGQMT 256
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           + ++  + ++   LP     D     +  +MK CW   A+ R
Sbjct: 257 VLRLTELLERGERLPR---PDKCPAEVYHLMKNCWETEASFR 295

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 28  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 87
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 88  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 141 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 186
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 187 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 219

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 132 RTLAKQISLSECIGKGRYGE--VWRGVWHGENVAVK-IFFSRDEASWSRETEIYSTVL-- 186
           +++ K + L + IG+G +G+  + +    G    +K I  SR  +    E+     VL  
Sbjct: 21  QSMEKYVRLQK-IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIV 243
           ++H NI+ Y      S      L++V  Y   G L+  +N          Q++   + I 
Sbjct: 80  MKHPNIVQY----RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
             L H+H           I HRDIKS+NI +  +GT  + DFG+A    ++ N       
Sbjct: 136 LALKHVHDR--------KILHRDIKSQNIFLTKDGTVQLGDFGIA----RVLNSTVELAR 183
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             +GT  Y+SPEI +     +      K+DI+ALG VL+E+C
Sbjct: 184 ACIGTPYYLSPEICENKPYNN------KSDIWALGCVLYELC 219

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 17  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 77  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 175
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 176 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+          +A+K+ F         E    RE EI S   L
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 70  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ +NG   IADFG +V ++  S +  +      
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRTTL-----C 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 11  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 69  RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S + D+      
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+          +A+K+ F         E    RE EI S   L
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 70  RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ +NG   IADFG +V     S++ D       
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDT----LC 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILG 194
           +GKG +G V    +       GE VAVK      E     + RE EI  +  L+H+NI+ 
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS--LQHDNIVK 78
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           Y G   ++      L L+  +  +GSL ++L  ++  ++H ++++    I  G+ +L T+
Sbjct: 79  YKGVCYSA--GRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            +         HRD+ ++NILV+      I DFGL     Q      +   P      + 
Sbjct: 137 RY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWY 187
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           +PE L ES        F  A D+++ G+VL+E+          E+ K+P  + + M    
Sbjct: 188 APESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAEFMRM--IG 232
Query: 372 DDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS----ALRVKKT 424
           +D +  + +     +L N       D   + +  +M ECW+ N N R S    ALRV + 
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
Query: 425 LIKLA 429
              +A
Sbjct: 293 RDNMA 297

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 74  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S + ++      GT  Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTEL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 132/313 (42%), Gaps = 59/313 (18%)
Query: 134 LAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYS 183
            AK+I +S     E IG G +GEV RG           VA+K           RE    +
Sbjct: 7   FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 184 TVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKIC 239
           +++    H NI+   G    S      + ++T +   G+L  +  LN       Q++ + 
Sbjct: 67  SIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             I +G+ +L         + +  HRD+ ++NILV +N  C ++DFGL+    +  N  D
Sbjct: 123 RGIASGMRYL--------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE--NSSD 172
Query: 300 IPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFE 355
                 +G K   R+ +PE +        F  F  A D ++ G+V+WEV         F 
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAI-------AFRKFTSASDAWSYGIVMWEVMS-------FG 218
Query: 356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           E   PY D+     S  D+   I  D + P  P+         ++ ++M +CW ++ N R
Sbjct: 219 ER--PYWDM-----SNQDVINAIEQDYRLPPPPD------CPTSLHQLMLDCWQKDRNAR 265
Query: 416 LSALRVKKTLIKL 428
               +V   L K+
Sbjct: 266 PRFPQVVSALDKM 278

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 8   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 66
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   + +VT Y S GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 67  ----QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  N  C +ADFGLA          D     R G K  
Sbjct: 123 MNY--------VHRDLRAANILVGENLVCKVADFGLARLIE------DNEXTARQGAKFP 168
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 169 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 203

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 56/289 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           K ++  + +G G++G V  G W G+ +VA+K+     E S S +  I    +   L HE 
Sbjct: 9   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
           ++   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L
Sbjct: 66  LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
            ++ F         HRD+ ++N LV   G   ++DFGL+         +D       G+K
Sbjct: 122 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSRGSK 167
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              R+  PE+L  S     F S  K+DI+A G+++WE         I+   K PY     
Sbjct: 168 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 208
Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               F +      I Q   +      S+        +M  CWH+ A+ R
Sbjct: 209 ---RFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCWHEKADER 250

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 243 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +    HRD+++ NILV  N  C +ADFGLA          D     R G K  
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 243 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +    HRD+++ NILV  N  C +ADFGLA          D     R G K  
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFS--RDEASWSRETEIYSTVLLRHENILGYIG 197
           + +G G +G V++G+W   GENV + +     R+  S     EI     L    ++  +G
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI-----LDEAYVMAGVG 77
Query: 198 SDMTSR--NSC--TQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
           S   SR    C  + + LVT    +G L DH+  NR  L    ++  C+ I  G+ +L  
Sbjct: 78  SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVK+     I DFGLA
Sbjct: 138 V--------RLVHRDLAARNVLVKSPNHVKITDFGLA 166

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 144 IGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTS 202
           +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++      + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV-----QLYA 329
Query: 203 RNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
             S   +++VT Y S GSL D L   T   L   Q++ +   I +G+ ++    +     
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----- 384
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK---RYMSPEI 316
               HRD+++ NILV  N  C +ADFGLA          D     R G K   ++ +PE 
Sbjct: 385 ---VHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFPIKWTAPEA 435
Query: 317 LDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
                    +  F  K+D+++ G++L E+  + +
Sbjct: 436 A-------LYGRFTIKSDVWSFGILLTELTTKGR 462

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 99
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 100 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 153 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 198
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 199 LPPEMIEGRMHDE------KVDLWSLGVLCYE 224

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y + GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 74  ----QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 130 MNY--------VHRDLRAANILVGENLVCKVADFGLA 158

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 9   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 67
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 68  ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 124 MNY--------VHRDLRAANILVGENLVCKVADFGLA 152

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 13  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 73  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL    S+L            G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL----SRLMTGDTF--TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 16  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++  + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 76  LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 129 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 174
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 175 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 207

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y + GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 74  ----QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 130 MNY--------VHRDLRAANILVGENLVCKVADFGLA 158

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 80  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 7   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 65
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 66  ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 122 MNY--------VHRDLRAANILVGENLVCKVADFGLA 150

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 20  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++  + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 80  LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+          +A+K+ F         E    RE EI S   L
Sbjct: 8   EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G    S    T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 66  RHPNILRLYGYFHDS----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 122 SYCHSK--------KVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 34  ITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 93
Query: 196 IGSDMTSRNSCT---QLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT     ++VT Y  +G+L D+L   NR  +    ++ +   I + + +L
Sbjct: 94  LGV-------CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 147 EKKNF--------IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY------TAHAGAK 192
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        + +F  K+D++A G++LWE+ 
Sbjct: 193 FPIKWTAPESL-------AYNTFSIKSDVWAFGVLLWEIA 225

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 74  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 5   EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 62
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 63  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 119 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 164
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 165 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 195

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 75  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 128
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V     S++ D       GT  Y+ P
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDT----LCGTLDYLPP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 177 EMIEGRMHDE------KVDLWSLGVLCYE 199

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 76
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 77  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 130
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y+ P
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 178
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 179 EMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 79  YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 178 LPPEMIEGRMHDE------KVDLWSLGVLCYE 203

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 75
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 76  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y+ P
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 177
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 178 EMIEGRMHDE------KVDLWSLGVLCYE 200

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 90
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 91  YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 144 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 189
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 190 LPPEMIEGRMHDE------KVDLWSLGVLCYE 215

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 7   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 64
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 65  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 121 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 166
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 167 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 197

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 8   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 66  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
           IG+G +GEV++      G+ VA+K     +E      T   EI    LL+HEN++  I  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSC-TQLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +  +  N C   ++LV  +  H   G L + L + TL+  ++ ++   ++NGL ++H 
Sbjct: 86  CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV T  Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
             PE+L
Sbjct: 196 RPPELL 201

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 8   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 66  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTXL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 8   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 66  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 12  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 70  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
           IG+G +GEV++      G+ VA+K     +E      T   EI    LL+HEN++  I  
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +  +  N C   ++LV  +  H   G L + L + TL+  ++ ++   ++NGL ++H 
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 141
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV T  Y
Sbjct: 142 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 312 MSPEIL 317
             PE+L
Sbjct: 195 RPPELL 200

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 11  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 69  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 76
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 77  YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 130 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDY 175
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 176 LPPEMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 11  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 69  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
           IG+G +GEV++      G+ VA+K     +E      T   EI    LL+HEN++  I  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +  +  N C   ++LV  +  H   G L + L + TL+  ++ ++   ++NGL ++H 
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV T  Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
             PE+L
Sbjct: 196 RPPELL 201

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
           IG+G +GEV++      G+ VA+K     +E      T   EI    LL+HEN++  I  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +  +  N C   ++LV  +  H   G L + L + TL+  ++ ++   ++NGL ++H 
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV T  Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
             PE+L
Sbjct: 196 RPPELL 201

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 51/290 (17%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V    +       GE VAVK   +    +  + W +E +I  T  L HE+I+
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT--LYHEHII 79
Query: 194 GYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
            Y G   D   ++    L LV  Y   GSL D+L R ++   Q++     I  G+ +LH+
Sbjct: 80  KYKGCCEDQGEKS----LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPR 305
           + +         HR++ ++N+L+  +    I DFGLA +      Y ++    D P    
Sbjct: 136 QHY--------IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---- 183
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
                + +PE L E      ++ +  +D+++ G+ L+E+     ++   +     + +L+
Sbjct: 184 ---VFWYAPECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELI 231
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            +      + ++  + ++   LP     D     +  +MK CW   A+ R
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPR---PDKCPCEVYHLMKNCWETEASFR 278

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G++GEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 13  ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 73  LGV-------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+ + NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLAAANILVGENLVCKVADFGLA 161

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
           + + L   +G+G +GEVW G W+G   VA+K     +    ++ +E ++   +  RHE +
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI--RHEKL 75
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHL 249
           +      + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++
Sbjct: 76  V-----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
               +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 131 ERMNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 144 IGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYIGSD 199
           IG G +G+V++GV   G  VA+K      E+S   E        L   RH +++  IG  
Sbjct: 47  IGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIF 254
              RN   ++ L+  Y   G+L  HL  +     +++  Q ++IC+    GL +LHT   
Sbjct: 104 CDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKRYM 312
                 AI HRD+KS NIL+  N    I DFG+    S+   ++D      V  GT  Y+
Sbjct: 159 ------AIIHRDVKSINILLDENFVPKITDFGI----SKKGTELDQTHLXXVVKGTLGYI 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV-CRRT 348
            PE   +          +K+D+Y+ G+VL+EV C R+
Sbjct: 209 DPEYFIKG------RLTEKSDVYSFGVVLFEVLCARS 239

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  +N   ++ +   I + + +L
Sbjct: 321 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HR++ ++N LV  N    +ADFGL    S+L            G K
Sbjct: 374 EKKNF--------IHRNLAARNCLVGENHLVKVADFGL----SRLMTGDTY--TAHAGAK 419
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 420 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 452

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 144 IGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYIGSD 199
           IG G +G+V++GV   G  VA+K      E+S   E        L   RH +++  IG  
Sbjct: 47  IGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIF 254
              RN   ++ L+  Y   G+L  HL  +     +++  Q ++IC+    GL +LHT   
Sbjct: 104 CDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                 AI HRD+KS NIL+  N    I DFG++   ++L            GT  Y+ P
Sbjct: 159 ------AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK--GTLGYIDP 210
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV-CRRT 348
           E   +          +K+D+Y+ G+VL+EV C R+
Sbjct: 211 EYFIKG------RLTEKSDVYSFGVVLFEVLCARS 239

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 51/290 (17%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V    +       GE VAVK   +    +  + W +E +I  T  L HE+I+
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT--LYHEHII 79
Query: 194 GYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
            Y G   D   ++    L LV  Y   GSL D+L R ++   Q++     I  G+ +LH 
Sbjct: 80  KYKGCCEDQGEKS----LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPR 305
           + +         HR++ ++N+L+  +    I DFGLA +      Y ++    D P    
Sbjct: 136 QHY--------IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---- 183
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
                + +PE L E      ++ +  +D+++ G+ L+E+     ++   +     + +L+
Sbjct: 184 ---VFWYAPECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELI 231
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            +      + ++  + ++   LP     D     +  +MK CW   A+ R
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPR---PDKCPCEVYHLMKNCWETEASFR 278

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 139 SLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRE-TEIYSTVLLRHENILG 194
            L E IG G    V         E VA+K I   + + S      EI +     H NI+ 
Sbjct: 13  ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---------LNHHQMMKICLSIVNG 245
           Y     TS     +LWLV    S GS+ D +             L+   +  I   ++ G
Sbjct: 73  Y----YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L +LH        K    HRD+K+ NIL+  +G+  IADFG++   + L+   DI  N  
Sbjct: 129 LEYLH--------KNGQIHRDVKAGNILLGEDGSVQIADFGVS---AFLATGGDITRNKV 177
Query: 306 ----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
               VGT  +M+PE++++    D      KADI++ G+   E+     A G      APY
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDF-----KADIWSFGITAIEL-----ATG-----AAPY 222
Query: 362 HDLVPM 367
           H   PM
Sbjct: 223 HKYPPM 228

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 139 SLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRE-TEIYSTVLLRHENILG 194
            L E IG G    V         E VA+K I   + + S      EI +     H NI+ 
Sbjct: 18  ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---------LNHHQMMKICLSIVNG 245
           Y     TS     +LWLV    S GS+ D +             L+   +  I   ++ G
Sbjct: 78  Y----YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L +LH        K    HRD+K+ NIL+  +G+  IADFG++   + L+   DI  N  
Sbjct: 134 LEYLH--------KNGQIHRDVKAGNILLGEDGSVQIADFGVS---AFLATGGDITRNKV 182
Query: 306 ----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
               VGT  +M+PE++++    D      KADI++ G+   E+     A G      APY
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDF-----KADIWSFGITAIEL-----ATGA-----APY 227
Query: 362 HDLVPM 367
           H   PM
Sbjct: 228 HKYPPM 233

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 41/218 (18%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
             +   +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRH 72
Query: 190 ENIL---GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNG 245
            NIL   GY        +  T+++L+  Y   G +Y  L + +  +  +       + N 
Sbjct: 73  PNILRLYGYF-------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L + H++         + HRDIK +N+L+ + G   IADFG +V ++  S +  +     
Sbjct: 126 LSYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL----- 171
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
            GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 172 XGTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 203

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     +  E  +  E E+   + L H  ++
Sbjct: 9   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 66
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LVT +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 67  QLYGVCLEQAPIC----LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +  + HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 122 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 168
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +
Sbjct: 169 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 208

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++V  Y S GSL D L   T   L   Q++ +   I +G+ ++  
Sbjct: 243 ----QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +    HRD+++ NILV  N  C +ADFGLA          D     R G K  
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G +Y  L + +  +  +       + N L + H+
Sbjct: 79  YGYF-------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 178 LPPEMIEGRMHDE------KVDLWSLGVLCYE 203

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++V  Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  N  C +ADFGLA          D     R G K  
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLARLIE------DNEXTARQGAKFP 178
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 179 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 213

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 13  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++  + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 73  LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K     + +  +   E      LRHE ++ 
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLV- 243
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 244 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  N  C +ADFGL           D     R G K  
Sbjct: 300 MNY--------VHRDLRAANILVGENLVCKVADFGLGRLIE------DNEYTARQGAKFP 345
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
            ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 346 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 380

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 21  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 78  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 133 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 178
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 179 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 210

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 24  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 81  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 136 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 181
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 182 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 213

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 75
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G      +  T+++L+  Y   G++Y  L + +  +  +       + N L + H++  
Sbjct: 76  YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+ + G   IA+FG +V ++  S +  +      GT  Y+ P
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPP 177
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E+++  ++ +      K D+++LG++ +E
Sbjct: 178 EMIEGRMHDE------KVDLWSLGVLCYE 200

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++V  Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 70  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 125 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 170
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 171 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V    +       GE VAVK        +  + W RE EI  T  L HE+I+
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT--LYHEHIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            Y G          QL  V  Y   GSL D+L R  +   Q++     I  G+ +LH + 
Sbjct: 75  KYKGCCEDQGEKSVQL--VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPRVG 307
           +         HR + ++N+L+  +    I DFGLA +      Y ++    D P      
Sbjct: 133 Y--------IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF---- 180
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
              + +PE L E       + +  +D+++ G+ L+E+     +N   +     + +L+  
Sbjct: 181 ---WYAPECLKEC------KFYYASDVWSFGVTLYELLTYCDSN---QSPHTKFTELIGH 228
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                 + ++  + ++   LP     D     +  +MK CW   A+ R
Sbjct: 229 TQGQMTVLRLTELLERGERLPR---PDRCPCEIYHLMKNCWETEASFR 273

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 15  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 72  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 127 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 172
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 173 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 23  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 80  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 135 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 180
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 181 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 212

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++  + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++VT Y S G L D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V    +       GE VAVK        +  + W RE EI  T  L HE+I+
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT--LYHEHIV 73
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            Y G          QL  V  Y   GSL D+L R  +   Q++     I  G+ +LH + 
Sbjct: 74  KYKGCCEDQGEKSVQL--VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPRVG 307
           +         HR + ++N+L+  +    I DFGLA +      Y ++    D P      
Sbjct: 132 Y--------IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF---- 179
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
              + +PE L E       + +  +D+++ G+ L+E+     +N   +     + +L+  
Sbjct: 180 ---WYAPECLKEC------KFYYASDVWSFGVTLYELLTYCDSN---QSPHTKFTELIGH 227
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                 + ++  + ++   LP     D     +  +MK CW   A+ R
Sbjct: 228 TQGQMTVLRLTELLERGERLPR---PDRCPCEIYHLMKNCWETEASFR 272

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 14  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 70
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 71  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 126 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 171
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 172 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 205

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 79  YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +V ++  S +  +      GT  Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE ++   + +      K D+++LG++ +E
Sbjct: 178 LPPEXIEGRXHDE------KVDLWSLGVLCYE 203

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 15  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 71
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 72  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 127 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 172
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 173 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 206

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
           +   +   +GKG++G V+  R       +A+K+ F         E    RE EI S   L
Sbjct: 11  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
           RH NIL   G      +  T+++L+  Y   G++Y  L + +  +  +       + N L
Sbjct: 69  RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H++         + HRDIK +N+L+ + G   IA+FG +V ++  S +  +      
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           GT  Y+ PE+++  ++ +      K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 8   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 64
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 65  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 120 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 165
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 166 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 199

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 15  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++  + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 75  LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HRD+ ++N LV  N    +ADFGL+   +  +           G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 61/292 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + I L + +G G++GEVW G ++    VAVK           +   +     L   N++ 
Sbjct: 13  ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL---------KPGTMSVQAFLEEANLMK 63
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGL 246
            +  D   R          ++++T Y + GSL D L           +++     I  G+
Sbjct: 64  TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            ++  + +         HRD+++ N+LV  +  C IADFGLA          D     R 
Sbjct: 124 AYIERKNY--------IHRDLRAANVLVSESLMCKIADFGLARVIE------DNEYTARE 169
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
           G K   ++ +P    E+IN  CF    K+D+++ G++L+E+             K PY  
Sbjct: 170 GAKFPIKWTAP----EAINFGCFTI--KSDVWSFGILLYEIVTYG---------KIPYPG 214
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               D        V+    Q   +P     ++  + +  +MK CW + A  R
Sbjct: 215 RTNAD--------VMTALSQGYRMPR---VENCPDELYDIMKMCWKEKAEER 255

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 46/220 (20%)
Query: 144 IGKGRYGEVW---RGVWHGENVAVKIF---------FSRDEASWSR-ETEIYSTVLL--- 187
           +G G YGEV        H E  A+K+          +S D  +  +   EIY+ + L   
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEK-AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 188 -RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
             H NI+         +      +LVT ++  G L++ + NR   +      I   I++G
Sbjct: 103 LDHPNIIKLFDVFEDKK----YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPP 302
           + +LH        K  I HRDIK +NIL++   + +   I DFGL+  +S+     D   
Sbjct: 159 ICYLH--------KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-----DYKL 205
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             R+GT  Y++PE+L +  N  C       D+++ G++++
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNEKC-------DVWSCGVIMY 238

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
            +GKG +GEV   +    G+  AVK+   R      D+ S  RE ++     L H NI+ 
Sbjct: 33  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 90
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                          +LV   ++ G L+D + +R   +     +I   +++G+ ++H   
Sbjct: 91  L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH--- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                K  I HRD+K +N+L+++   +    I DFGL+  + + S KM      ++GT  
Sbjct: 144 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM----KDKIGTAY 193
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           Y++PE+L  + +  C       D+++ G++L+
Sbjct: 194 YIAPEVLHGTYDEKC-------DVWSTGVILY 218

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++V  Y S GSL D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
            GY        +  T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 75  YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + HRDIK +N+L+ + G   IADFG +  ++  S +  +      GT  Y
Sbjct: 128 K--------RVIHRDIKPENLLLGSAGELKIADFGWSC-HAPSSRRTTL-----SGTLDY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
           + PE+++  ++ +      K D+++LG++ +E
Sbjct: 174 LPPEMIEGRMHDE------KVDLWSLGVLCYE 199

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 56/221 (25%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENIL- 193
            +GKG +GEV   +    G+  AVK+   R      D+ S  RE ++     L H NI+ 
Sbjct: 57  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 114
Query: 194 --------GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
                   GY              +LV   ++ G L+D + +R   +     +I   +++
Sbjct: 115 LYEFFEDKGY-------------FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
           G+ ++H        K  I HRD+K +N+L+++   +    I DFGL+  + + S KM   
Sbjct: 162 GITYMH--------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--- 209
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
              ++GT  Y++PE+L  + +  C       D+++ G++L+
Sbjct: 210 -KDKIGTAYYIAPEVLHGTYDEKC-------DVWSTGVILY 242

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 56/221 (25%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENIL- 193
            +GKG +GEV   +    G+  AVK+   R      D+ S  RE ++     L H NI+ 
Sbjct: 56  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 113
Query: 194 --------GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
                   GY              +LV   ++ G L+D + +R   +     +I   +++
Sbjct: 114 LYEFFEDKGY-------------FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
           G+ ++H        K  I HRD+K +N+L+++   +    I DFGL+  + + S KM   
Sbjct: 161 GITYMH--------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--- 208
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
              ++GT  Y++PE+L  + +  C       D+++ G++L+
Sbjct: 209 -KDKIGTAYYIAPEVLHGTYDEKC-------DVWSTGVILY 241

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
           I++   +G G+YGEV+ GVW   ++ V +   +++     E    + V+  ++H N++  
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
           +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + + +L
Sbjct: 282 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
             + F         HR++ ++N LV  N    +ADFGL    S+L            G K
Sbjct: 335 EKKNF--------IHRNLAARNCLVGENHLVKVADFGL----SRLMTGDTY--TAHAGAK 380
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
              ++ +PE L        +  F  K+D++A G++LWE+ 
Sbjct: 381 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 413

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 54/305 (17%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     +  E  +  E E+   + L H  ++
Sbjct: 8   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 65
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LV  +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 66  QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  + ++ HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 121 -------EASVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 167
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +    +
Sbjct: 168 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYENRSNSE 212
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
              +D+     +   +P L +  V         ++M  CW +    R +  R+ + L  +
Sbjct: 213 -VVEDISTGFRL--YKPRLASTHV--------YQIMNHCWKERPEDRPAFSRLLRQLAAI 261
Query: 429 ACADM 433
           A + +
Sbjct: 262 AASGL 266

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 21  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 78  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 133 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGAKF 178
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 179 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 210

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 18  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 74
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 75  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 130 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 175
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 176 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 209

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 70  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HRD+++ NILV    +C IADFGLA          D     R G 
Sbjct: 125 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 170
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 171 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 35  IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 92  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 147 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 198
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 199 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 233

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 7   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 64  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 4   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 61  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 116 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 168 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 202

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 25  LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 82  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 137 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGAKF 182
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 183 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 214

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 12  IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 69  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 124 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 176 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 210

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
           + L E +G G+ GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ ++
Sbjct: 15  LKLVERLGAGQAGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
                 + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  + 
Sbjct: 72  -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
              +         HRD+++ NILV    +C IADFGLA          D     R G K 
Sbjct: 127 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DAEXTAREGAKF 172
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 173 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 7   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 64  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 9   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 66  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 121 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 173 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 207

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
            +GKG +GEV   +    G+  AVK+   R      D+ S  RE ++     L H NI+ 
Sbjct: 39  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 96
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                          +LV   ++ G L+D + +R   +     +I   +++G+ ++H   
Sbjct: 97  L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH--- 149
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                K  I HRD+K +N+L+++   +    I DFGL+  + + S KM      ++GT  
Sbjct: 150 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM----KDKIGTAY 199
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           Y++PE+L  + +  C       D+++ G++L+
Sbjct: 200 YIAPEVLHGTYDEKC-------DVWSTGVILY 224

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 10  IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 67  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 122 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 173
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 174 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 208

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 7   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 64  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV----SYSQLSN 296
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL+     S    ++
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS 170
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           K  +P        ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 171 KGKLP-------IKWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     S  E  +  E E+   + L H  ++
Sbjct: 28  ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEV--MMKLSHPKLV 85
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LV  +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 86  QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 140
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +  + HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 141 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 187
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +
Sbjct: 188 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 227

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     +  E  +  E E+   + L H  ++
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 63
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LV  +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 64  QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 118
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +  + HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 119 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 165
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +
Sbjct: 166 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 205

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     +  E  +  E E+   + L H  ++
Sbjct: 8   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 65
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LV  +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 66  QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +  + HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 121 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 167
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +
Sbjct: 168 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 207

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 387 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 444 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV +N    + DFGL      +  Y   
Sbjct: 499 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 551 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 585

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 144 IGKGRYGEVWRG-VWHGENVAVKIFFSR----DEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G +G+V++G +  G  VAVK          E  +  E E+ S  +  H N+L   G 
Sbjct: 46  LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAV--HRNLLRLRGF 103
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            MT     T+  LV  Y + GS+   L     ++  L+  +  +I L    GL +LH   
Sbjct: 104 CMTP----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 159
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV-GTKRYM 312
                 P I HRD+K+ NIL+      V+ DFGLA    +L +  D      V GT  ++
Sbjct: 160 -----DPKIIHRDVKAANILLDEEFEAVVGDFGLA----KLMDYKDXHVXXAVRGTIGHI 210
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           +PE L         +S +K D++  G++L E+    +A
Sbjct: 211 APEYLSTG------KSSEKTDVFGYGVMLLELITGQRA 242

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 54/301 (17%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           +++  + IG G++G V  G W + + VA+K     +  E  +  E E+   + L H  ++
Sbjct: 11  ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 68
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
              G  +     C    LV  +   G L D+L   R       ++ +CL +  G+ +L  
Sbjct: 69  QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
                  +  + HRD+ ++N LV  N    ++DFG+          +D       GTK  
Sbjct: 124 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 170
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            ++ SPE+   S          K+D+++ G+++WEV         F E K PY +    +
Sbjct: 171 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYENRSNSE 215
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
              +D+     +   +P L +  V         ++M  CW +    R +  R+ + L ++
Sbjct: 216 -VVEDISTGFRL--YKPRLASTHV--------YQIMNHCWRERPEDRPAFSRLLRQLAEI 264
Query: 429 A 429
           A
Sbjct: 265 A 265

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
                + +  S   +++V  Y S G L D L       L   Q++ +   I +G+ ++  
Sbjct: 77  ----QLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +         HRD+++ NILV  N  C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
           + + L E +G G++GEVW G ++G   VAVK   S  + S S +  +    L   L+H+ 
Sbjct: 9   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++      + +  +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  
Sbjct: 66  LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +    +         HR++++ NILV    +C IADFGLA          D     R G 
Sbjct: 121 IEERNY--------IHRNLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 166
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           K   ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 167 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 200

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGLA   + +        N R+  K +M+PE L + +         ++D+++ G+++WE 
Sbjct: 201 FGLARDINNIDXXKKT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   +P++  F  +++   +D  +P         +  N +  +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTNELYMMM 292
Query: 405 KECWH 409
           ++CWH
Sbjct: 293 RDCWH 297

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGLA   + +        N R+  K +M+PE L + +         ++D+++ G+++WE 
Sbjct: 201 FGLARDINNIDXXKKT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   +P++  F  +++   +D  +P         +  N +  +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTNELYMMM 292
Query: 405 KECWH 409
           ++CWH
Sbjct: 293 RDCWH 297

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 37/210 (17%)
Query: 144 IGKGRYGEVW---RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENILGYI 196
           +G G YGEV      V H E  A+KI   +   S S  +++   V    LL H NI+   
Sbjct: 45  LGSGAYGEVLLCRDKVTHVER-AIKII-RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                 RN     +LV   +  G L+D + +R   N      I   +++G+ +LH     
Sbjct: 103 DFFEDKRN----YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH----- 153
Query: 256 TQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
              K  I HRD+K +N+L+++   +    I DFGL+  +     KM      R+GT  Y+
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-QKKM----KERLGTAYYI 205
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PE+L +  +  C       D++++G++L+
Sbjct: 206 APEVLRKKYDEKC-------DVWSIGVILF 228

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
           + + L + +G G++GEVW G W+G   VA+K     +    S+  E +I     L+H+ +
Sbjct: 9   ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKK--LKHDKL 66
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHL 249
           +      + +  S   +++VT Y + GSL D L       L    ++ +   +  G+ ++
Sbjct: 67  V-----QLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
               +         HRD++S NILV     C IADFGLA          D     R G K
Sbjct: 122 ERMNY--------IHRDLRSANILVGNGLICKIADFGLARLIE------DNEXTARQGAK 167
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
              ++ +PE          +  F  K+D+++ G++L E+  + +
Sbjct: 168 FPIKWTAPEAA-------LYGRFTIKSDVWSFGILLTELVTKGR 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + I L + +G G++GEVW G ++    VAVK           +   +     L   N++ 
Sbjct: 12  ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL---------KPGTMSVQAFLEEANLMK 62
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGL 246
            +  D   R          ++++T + + GSL D L           +++     I  G+
Sbjct: 63  TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            ++  + +         HRD+++ N+LV  +  C IADFGLA          D     R 
Sbjct: 123 AYIERKNY--------IHRDLRAANVLVSESLMCKIADFGLARVIE------DNEYTARE 168
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
           G K   ++ +P    E+IN  CF    K+++++ G++L+E+             K PY  
Sbjct: 169 GAKFPIKWTAP----EAINFGCFTI--KSNVWSFGILLYEIVTYG---------KIPYPG 213
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
               D        V+    Q   +P     ++  + +  +MK CW + A  R
Sbjct: 214 RTNAD--------VMSALSQGYRMPRM---ENCPDELYDIMKMCWKEKAEER 254

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGLA   + +    +   N R+  K +M+PE L + +         ++D+++ G+++WE 
Sbjct: 201 FGLARDINNIDYYKNT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   +P++  F  +++   +D+            +  N +  +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNELYMMM 292
Query: 405 KECWH 409
           ++CWH
Sbjct: 293 RDCWH 297

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 68  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 121
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 122 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 168
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 169 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 196

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 70  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 288 LYMMMRDCWH 297

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 144 IGKGRYGEVWRG-VWHGENVAVKIFFSRDEASWSRE----TEIYSTVLLRHENILGYIGS 198
           +G+G +G+V++G +  G  VAVK    ++E +   E    TE+    +  H N+L   G 
Sbjct: 38  LGRGGFGKVYKGRLADGXLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            MT     T+  LV  Y + GS+   L     ++  L+  +  +I L    GL +LH   
Sbjct: 96  CMTP----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                 P I HRD+K+ NIL+      V+ DFGLA         +       +G   +++
Sbjct: 152 -----DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG---HIA 203
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           PE L         +S +K D++  G++L E+    +A
Sbjct: 204 PEYLSTG------KSSEKTDVFGYGVMLLELITGQRA 234

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      G   A K+  ++ E     +  E EI +T    H  I+  +G+
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--DHPYIVKLLGA 76
Query: 199 DMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                    +LW++  +   G+   +   L+R  L   Q+  +C  ++  L  LH++   
Sbjct: 77  YYHD----GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK--- 128
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ N+L+   G   +ADFG++    +   K D      +GT  +M+PE
Sbjct: 129 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPE 179
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++      D    + KADI++LG+ L E+           + + P+H+L P       MR
Sbjct: 180 VVMCETMKDTPYDY-KADIWSLGITLIEMA----------QIEPPHHELNP-------MR 221
Query: 376 KVICIDQQRP---VLPNRW 391
            ++ I +  P   + P++W
Sbjct: 222 VLLKIAKSDPPTLLTPSKW 240

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 141 SECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
            E +GKG +G+  + V H   GE + +K     DE +  +   E+     L H N+L +I
Sbjct: 15  GEVLGKGCFGQAIK-VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTEIF 254
           G     +    +L  +T Y   G+L   +      +   Q +     I +G+ +LH+   
Sbjct: 74  GVLYKDK----RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSNKMDIPPNPR--- 305
                  I HRD+ S N LV+ N   V+ADFGLA       +  +    +  P   +   
Sbjct: 128 ------NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 306 -VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
            VG   +M+PE+    IN   ++  +K D+++ G+VL E+  R  A+
Sbjct: 182 VVGNPYWMAPEM----INGRSYD--EKVDVFSFGIVLCEIIGRVNAD 222

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMRIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 288 LYMMMRDCWH 297

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
           +G G +G+V++      G   A K+  ++ E     +  E EI +T    H  I+  +G+
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--DHPYIVKLLGA 84
Query: 199 DMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                    +LW++  +   G+   +   L+R  L   Q+  +C  ++  L  LH++   
Sbjct: 85  YYHD----GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK--- 136
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K+ N+L+   G   +ADFG++    +   K D      +GT  +M+PE
Sbjct: 137 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPE 187
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++      D    + KADI++LG+ L E+           + + P+H+L P       MR
Sbjct: 188 VVMCETMKDTPYDY-KADIWSLGITLIEMA----------QIEPPHHELNP-------MR 229
Query: 376 KVICIDQQRP---VLPNRW 391
            ++ I +  P   + P++W
Sbjct: 230 VLLKIAKSDPPTLLTPSKW 248

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 7   IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 64  TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV       + DFGL      +  Y   
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIITLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 288 LYMMMRDCWH 297

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGY 195
           L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
            G     R      +L   Y S G L+D +     +      +    ++ G+V+LH    
Sbjct: 70  YGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGTK 309
                  I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT 
Sbjct: 124 ------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGTL 170
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVL 341
            Y++PE+L        F + +  D+++ G+VL
Sbjct: 171 PYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGY 195
           L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
            G     R      +L   Y S G L+D +     +      +    ++ G+V+LH    
Sbjct: 71  YGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGTK 309
                  I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT 
Sbjct: 125 ------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGTL 171
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVL 341
            Y++PE+L        F + +  D+++ G+VL
Sbjct: 172 PYVAPELLKRR----EFHA-EPVDVWSCGIVL 198

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 288 LYMMMRDCWH 297

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 82  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 142 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 228 TT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 246
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 247 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 293
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 294 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 333
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 334 LYMMMRDCWH 343

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIINLLGA-------CTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 288 LYMMMRDCWH 297

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 28  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 88  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 192
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 193 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 239
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 240 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDKPA----------NCTNE 279
Query: 400 MTKVMKECWH 409
           +  +M++CWH
Sbjct: 280 LYMMMRDCWH 289

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 25  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 85  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 189
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 190 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 236
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 237 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 276
Query: 400 MTKVMKECWHQNANVR 415
           +  +M++CWH   + R
Sbjct: 277 LYMMMRDCWHAVPSQR 292

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 96  MIGKHKNIIHLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWHQNANVR 415
           +  +M++CWH   + R
Sbjct: 288 LYMMMRDCWHAVPSQR 303

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
            S+   IG+G +GEV+  R    G+  A+K    +       ET   +  ++      G 
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
             +I     + ++  +L  +    + G L+ HL++  +     M+     I+ GL H+H 
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RD+K  NIL+  +G   I+D GLA  +S+        P+  VGT  Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           M+PE+L + +  D       AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
            S+   IG+G +GEV+  R    G+  A+K    +       ET   +  ++      G 
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
             +I     + ++  +L  +    + G L+ HL++  +     M+     I+ GL H+H 
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RD+K  NIL+  +G   I+D GLA  +S+        P+  VGT  Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           M+PE+L + +  D       AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
           +++L + +G+G +G+V      G       E V V +   +D+A+    +++ S + +  
Sbjct: 23  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
              +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              NR
Sbjct: 83  MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
                +    ++     +  G+ +L ++           HRD+ ++N+LV  N    IAD
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLTARNVLVTENNVMKIAD 187
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
           FGLA     + Y + +    +P        ++M+PE L + +         ++D+++ G+
Sbjct: 188 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 234
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           ++WE         IF    +PY   +P++  F  +++   +D+            +  N 
Sbjct: 235 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 274
Query: 400 MTKVMKECWHQNANVR 415
           +  +M++CWH   + R
Sbjct: 275 LYMMMRDCWHAVPSQR 290

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAVKI       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G+  Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
            +GKG +GEV   +    G+  AVK+   R      D+ S  RE ++     L H NI  
Sbjct: 33  VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIXK 90
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                          +LV   ++ G L+D + +R   +     +I   +++G+ + H   
Sbjct: 91  L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH--- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                K  I HRD+K +N+L+++   +    I DFGL+  +       D     ++GT  
Sbjct: 144 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD-----KIGTAY 193
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           Y++PE+L  + +  C       D+++ G++L+
Sbjct: 194 YIAPEVLHGTYDEKC-------DVWSTGVILY 218

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
            S+   IG+G +GEV+  R    G+  A+K    +       ET   +  ++      G 
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
             +I     + ++  +L  +    + G L+ HL++    +   M      I+ GL H+H 
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RD+K  NIL+  +G   I+D GLA  +S+        P+  VGT  Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           M+PE+L + +  D       AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAVKI       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G+  Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
            S+   IG+G +GEV+  R    G+  A+K    +       ET   +  ++      G 
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
             +I     + ++  +L  +    + G L+ HL++    +   M      I+ GL H+H 
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RD+K  NIL+  +G   I+D GLA  +S+        P+  VGT  Y
Sbjct: 310 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 355
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           M+PE+L + +  D       AD ++LG +L+++ R
Sbjct: 356 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 385

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 59/315 (18%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRG--VWHGEN---VAVKIFFSRDEASWSRETEI 181
           R  AK+I +S     + IG G +GEV  G     G+    VA+K   S       R+   
Sbjct: 24  REFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS 83
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
            ++++    H N++   G    S    T + ++T +   GSL   L  N       Q++ 
Sbjct: 84  EASIMGQFDHPNVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 139
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
           +   I  G+ +L    +         HRD+ ++NILV +N  C ++DFGL+       + 
Sbjct: 140 MLRGIAAGMKYLADMNY--------VHRDLAARNILVNSNLVCKVSDFGLSRFLE--DDT 189
Query: 298 MDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGI 353
            D      +G K   R+ +PE +        +  F  A D+++ G+V+WEV         
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQ-------YRKFTSASDVWSYGIVMWEVMSYG----- 237
Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
               + PY D+   D        VI   +Q   LP      S L+   ++M +CW ++ N
Sbjct: 238 ----ERPYWDMTNQD--------VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRN 282
Query: 414 VRLSALRVKKTLIKL 428
            R    ++  TL K+
Sbjct: 283 HRPKFGQIVNTLDKM 297

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
           IQR   ++I L  CIG+G++G+V +G++   EN  +AV I   ++  S S RE  +   +
Sbjct: 387 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
            +R   H +I+  IG  + + N    +W++    + G L   L   + +L+   ++    
Sbjct: 444 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
            +   L +L ++ F         HRDI ++N+LV       + DFGL      +  Y   
Sbjct: 499 QLSTALAYLESKRF--------VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+
Sbjct: 551 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 585

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 136 KQISLSECIGKGRYGEVW-----RGVWHGENVAVKIFFSRDEASWSRETEIYST--VLLR 188
           +   L + +G G YG+V+      G   G+  A+K+         ++ TE   T   +L 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLV 247
           H     ++ +   +  + T+L L+  Y + G L+ HL+ R     H++      IV  L 
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY--SQLSNKMDIPPNPR 305
           HLH        K  I +RDIK +NIL+ +NG  V+ DFGL+  +   +     D      
Sbjct: 174 HLH--------KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF----- 220
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
            GT  YM+P+I+      D     K  D ++LG++++E+ 
Sbjct: 221 CGTIEYMAPDIVR---GGDSGHD-KAVDWWSLGVLMYELL 256

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           +G+G YG V   R    G  VA+K F   D+    ++    EI     LRHEN++  +  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
               +    + +LV  +     L D  L    L++  + K    I+NG+   H+      
Sbjct: 93  CKKKK----RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               I HRDIK +NILV  +G   + DFG A + +      D      V T+ Y +PE+L
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD----DEVATRWYRAPELL 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +        K  D++A+G ++ E+
Sbjct: 197 VGDVKYG-----KAVDVWAIGCLVTEM 218

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN---ILGYIGS 198
           IG+G YG V + V    G+ +AVK   S  +    ++  +   V++R  +   I+ + G+
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 199 DMTSRNS--CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                +   C +L   +    +  +Y  L+   +    + KI L+ V  L HL   +   
Sbjct: 90  LFREGDCWICMELMSTSFDKFYKYVYSVLD-DVIPEEILGKITLATVKALNHLKENL--- 145
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I HRDIK  NIL+  +G   + DFG++    QL +   I      G + YM+PE 
Sbjct: 146 ----KIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDS--IAKTRDAGCRPYMAPER 196
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCR----RTKANGIFEE 356
           +D S +   ++   ++D+++LG+ L+E+        K N +F++
Sbjct: 197 IDPSASRQGYDV--RSDVWSLGITLYELATGRFPYPKWNSVFDQ 238

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAVKI       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G   Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLD----AFCGAPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
           IG G YG V+  R    G  VA+K     +       + +    LLR      H N++  
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
           +    TSR        +   H    L  +L++     L    +  +    + GL  LH  
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K +NILV + GT  +ADFGLA  YS    +M +  +P V T  Y 
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--DPVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
           +PE+L +S            D++++G +  E+ RR           +   IF+    P  
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
           D  P D S    R        RPV   + V      +  +++ E    N + R+SA R  
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
                 A    Y+H  +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 40/239 (16%)
Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+       +  VA+K+ F         E    RE EI +   L H NIL  
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH--LHHPNILRL 88
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
                  R    +++L+  Y   G LY  L ++ T +  +   I   + + L++ H    
Sbjct: 89  YNYFYDRR----RIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH---- 140
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
              GK  I HRDIK +N+L+   G   IADFG +V    L  K         GT  Y+ P
Sbjct: 141 ---GKKVI-HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT------MCGTLDYLPP 190
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE--EYKAPYHDLVPMDPSF 371
           E+++  ++ +      K D++ +G++ +E+      N  FE   +   Y  +V +D  F
Sbjct: 191 EMIEGRMHNE------KVDLWCIGVLCYELL---VGNPPFESASHNETYRRIVKVDLKF 240

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 144 IGKGRYGEVW------RGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V        G   GE VAVK           A   +E EI     L HENI+
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN--LYHENIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            Y G  + + +    + L+  +   GSL ++L  N+  +N  Q +K  + I  G+ +L  
Sbjct: 75  KYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-- 130
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                 G     HRD+ ++N+LV++     I DFGL  +  +   +     + R     +
Sbjct: 131 ------GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFW 183
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN----GIFEEYKAPYHDLVPM 367
            +PE L +S      + +  +D+++ G+ L E+     ++     +F +   P H  + +
Sbjct: 184 YAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 237
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
               + +++     ++ P  PN        + + ++M++CW    + R S
Sbjct: 238 TRLVNTLKE----GKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTS 277

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAVKI       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L         +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G   Y +
Sbjct: 134 --------IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLD----AFCGAPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+  +    D  E     D+++LG++L+
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILY 204

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAV+I       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G+  Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 36/226 (15%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS-- 198
            +G+G +G+V   R        A+K     +E   +  +E+     L H+ ++ Y  +  
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 199 -------DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
                   MT+    + L++   Y   G+LYD ++   LN    +  ++   I+  L ++
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
           H++         I HRD+K  NI +  +    I DFGLA +  +  +  K+D    P   
Sbjct: 133 HSQ--------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                 +GT  Y++ E+LD + + +     +K D+Y+LG++ +E+ 
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYN-----EKIDMYSLGIIFFEMI 225

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
           L + IGKG + +V   R V  G  VAVKI   + + + +   +++  V    +L H NI+
Sbjct: 19  LQKTIGKGNFAKVKLARHVLTGREVAVKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  T +     L+LV  Y S G ++D+L     +   +       IV+ + + H +
Sbjct: 78  KLFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K++N+L+  +    IADFG +  ++ + NK+D       G+  Y 
Sbjct: 134 Y--------IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDT----FCGSPPYA 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PE+  +    D  E     D+++LG++L+
Sbjct: 181 APELF-QGKKYDGPE----VDVWSLGVILY 205

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAV+I       S S +    E+    +L H NI+ 
Sbjct: 18  LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 78  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G+  Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLD----EFCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 144 IGKGRYGEVW------RGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENIL 193
           +G+G +G+V        G   GE VAVK           A   +E EI     L HENI+
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN--LYHENIV 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            Y G  + + +    + L+  +   GSL ++L  N+  +N  Q +K  + I  G+ +L  
Sbjct: 87  KYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                 G     HRD+ ++N+LV++     I DFGL  +  +   +     + R     +
Sbjct: 143 ------GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFW 195
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN----GIFEEYKAPYHDLVPM 367
            +PE L +S      + +  +D+++ G+ L E+     ++     +F +   P H  + +
Sbjct: 196 YAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 249
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
               + +++     ++ P  PN        + + ++M++CW    + R S
Sbjct: 250 TRLVNTLKE----GKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTS 289

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDM 200
           +GKG YG V+ G  + +   +A+K    RD   S     EI     L+H+NI+ Y+GS  
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-- 87
Query: 201 TSRNSCTQLWL---------VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
            S N   ++++               +G L D  N  T+  +        I+ GL +LH 
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQ-----ILEGLKYLHD 140
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                     I HRDIK  N+L+ T +G   I+DFG +   + ++   +       GT +
Sbjct: 141 N--------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET----FTGTLQ 188
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           YM+PEI+D+          K ADI++LG  + E+     A G     K P+++L
Sbjct: 189 YMAPEIIDKGPRG----YGKAADIWSLGCTIIEM-----ATG-----KPPFYEL 228

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    F         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 76/331 (22%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEAS-----WSRET 179
           +Q      I L   +G+G +G+V+    +      + + V +   +D +      + RE 
Sbjct: 7   VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR------------ 227
           E+ +   L+HE+I+ + G  +        L +V  Y   G L   L              
Sbjct: 67  ELLTN--LQHEHIVKFYGVCVEG----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 228 --TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
             T L   QM+ I   I  G+V+L ++ F         HRD+ ++N LV  N    I DF
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYLASQHF--------VHRDLATRNCLVGENLLVKIGDF 172
Query: 286 GL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV 340
           G+     +  Y ++     +P        R+M P    ESI    F +  ++D+++LG+V
Sbjct: 173 GMSRDVYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSLGVV 219
Query: 341 LWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAM 400
           LWE         IF   K P++ L        +   + CI Q R +   R    +    +
Sbjct: 220 LWE---------IFTYGKQPWYQL-------SNNEVIECITQGRVLQRPR----TCPQEV 259
Query: 401 TKVMKECWHQNANVRLSALRVKKTLIKLACA 431
            ++M  CW +  ++R +   +   L  LA A
Sbjct: 260 YELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR Y+D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR Y+D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 31  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 88  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 145 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEXXSVHNK 193
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 194 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 241
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 242 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 282

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A    +   E +I S  L
Sbjct: 48  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLS 241
            +HENI+  +G+       CT    + ++T Y  +G L + L R +  L       I  S
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 242 IVN--GLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
            ++   L+H  +++   QG   +A     HRD+ ++N+L+       I DFGLA      
Sbjct: 160 TLSTRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           SN + +  N R+  K +M+PE +      DC  +  ++D+++ G++LWE+
Sbjct: 218 SNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 259

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
            L + +G+G  GEV   V     E VAVKI   +         + EI    +L HEN++ 
Sbjct: 9   DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
           + G     R      +L   Y S G L+D +     +      +    ++ G+V+LH   
Sbjct: 69  FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
                   I HRDIK +N+L+       I+DFGLA  +      +L NKM        GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L        F + +  D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGLA         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLARVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 143 CIGKGRYGEVWRG--VWHGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSD 199
            +GKG YG V+ G  + +   +A+K    RD   S     EI     L+H+NI+ Y+GS 
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 200 MTSRNSCTQLWL---------VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
             S N   ++++               +G L D  N  T+  +        I+ GL +LH
Sbjct: 74  -FSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTK-----QILEGLKYLH 125
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                      I HRDIK  N+L+ T +G   I+DFG +   + ++   +       GT 
Sbjct: 126 DN--------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET----FTGTL 173
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +YM+PEI+D+          K ADI++LG  + E+ 
Sbjct: 174 QYMAPEIIDKGPRG----YGKAADIWSLGCTIIEMA 205

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           IG G YG              VW+ + +G     +      E +  RE        L+H 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
           NI+ Y   D     + T L++V  Y   G L   + + T     L+   ++++   +   
Sbjct: 66  NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L   H     + G   + HRD+K  N+ +       + DFGLA    ++ N  +      
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDEDFAKEF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           VGT  YMSPE       M+     +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
           L + IGKG + +V   R +  G+ VAVKI       S S +    E+    +L H NI+ 
Sbjct: 11  LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 T +     L+LV  Y S G ++D+L     +   +       IV+ + + H + 
Sbjct: 71  LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I HRD+K++N+L+  +    IADFG +  ++   NK+D       G+  Y +
Sbjct: 127 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 173
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
           PE+  +    D  E     D+++LG++L+ + 
Sbjct: 174 PELF-QGKKYDGPE----VDVWSLGVILYTLV 200

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR Y+D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 17  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 76
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 77  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 130
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 182
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 226
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 227 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 270
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 271 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
           IG G YG V+  R    G  VA+K     +       + +    LLR      H N++  
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
           +    TSR        +   H    L  +L++     L    +  +    + GL  LH  
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K +NILV + GT  +ADFGLA  YS    +M +   P V T  Y 
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--APVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
           +PE+L +S            D++++G +  E+ RR           +   IF+    P  
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
           D  P D S    R        RPV   + V      +  +++ E    N + R+SA R  
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
                 A    Y+H  +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L + +G G++GEVW   ++    VAVK       +  +   E      L+H+ ++ 
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 240
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
                + +  +   ++++T + + GSL D L     +   + K+      I  G+  +  
Sbjct: 241 ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  +  C IADFGLA                RVG K  
Sbjct: 297 RNY--------IHRDLRAANILVSASLVCKIADFGLA----------------RVGAKFP 332
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
            ++ +PE ++       F SF  K+D+++ G++L E+ 
Sbjct: 333 IKWTAPEAIN-------FGSFTIKSDVWSFGILLMEIV 363

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 133/338 (39%), Gaps = 87/338 (25%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEAS---WSRET 179
           +Q    + I L   +G+G +G+V+    +  +       VAVK       A+   + RE 
Sbjct: 9   VQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREA 68
Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN------------- 226
           E+ +   L+HE+I+ + G           L +V  Y   G L   L              
Sbjct: 69  ELLTN--LQHEHIVKFYGVC----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 227 ----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI 282
               +  L   QM+ I   I +G+V+L ++ F         HRD+ ++N LV  N    I
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHF--------VHRDLATRNCLVGANLLVKI 174
Query: 283 ADFGL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
            DFG+     +  Y ++     +P        R+M P    ESI    F +  ++D+++ 
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSF 221
Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVS 393
           G++LWE         IF   K P+  L        +   + CI Q    +RP +  + V 
Sbjct: 222 GVILWE---------IFTYGKQPWFQL-------SNTEVIECITQGRVLERPRVCPKEVY 265
Query: 394 DSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
           D        VM  CW +    RL+   + K L  L  A
Sbjct: 266 D--------VMLGCWQREPQQRLNIKEIYKILHALGKA 295

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A    +   E +I S  L
Sbjct: 48  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLS 241
            +HENI+  +G+       CT    + ++T Y  +G L + L R +  L       I  S
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 242 IVN--GLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
             +   L+H  +++   QG   +A     HRD+ ++N+L+       I DFGLA      
Sbjct: 160 TASTRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           SN + +  N R+  K +M+PE +      DC  +  ++D+++ G++LWE+
Sbjct: 218 SNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 259

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 77/312 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 29  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 89  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           DFGLA     +        N R+  K +M+PE L + I         ++D+++ G++LWE
Sbjct: 193 DFGLARDIHHIDXXKKT-TNGRLPVK-WMAPEALFDRIYT------HQSDVWSFGVLLWE 244
Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKV 403
                    IF    +PY   VP++  F  +++   +D+            +  N +  +
Sbjct: 245 ---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTNELYMM 284
Query: 404 MKECWHQNANVR 415
           M++CWH   + R
Sbjct: 285 MRDCWHAVPSQR 296

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 29  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 86  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 143 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 191
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 192 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 239
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 240 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 280

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 24  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF 80
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 81  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 137
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 138 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 186
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 187 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 234
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 235 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 275

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 50  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 107 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 163
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 164 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 212
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 213 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 260
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 261 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 301

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 32  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 89  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 146 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
           IG G YG V+  R    G  VA+K     +       + +    LLR      H N++  
Sbjct: 12  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
           +    TSR        +   H    L  +L++     L    +  +    + GL  LH  
Sbjct: 72  MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K +NILV + GT  +ADFGLA  YS    +M +   P V T  Y 
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--FPVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
           +PE+L +S            D++++G +  E+ RR           +   IF+    P  
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
           D  P D S    R        RPV   + V      +  +++ E    N + R+SA R  
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
                 A    Y+H  +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 32  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 89  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 146 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 30  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 87  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 144 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 192
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 193 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 240
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 241 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 281

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           IG G YG              VW+ + +G     +      E +  RE        L+H 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
           NI+ Y   D     + T L++V  Y   G L   + + T     L+   ++++   +   
Sbjct: 66  NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L   H     + G   + HRD+K  N+ +       + DFGLA    ++ N         
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDTSFAKAF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           VGT  YMSPE       M+     +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 27  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 84  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 141 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 189
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 190 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 237
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 238 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 278

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 51  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 108 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 164
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 165 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 213
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 214 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 261
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 262 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 302

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 31  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 88  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 145 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 193
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 194 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 241
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 242 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 282

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 70  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 130 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 233
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 280
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 281 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 320
Query: 399 AMTKVMKECWH 409
            +  +M++CWH
Sbjct: 321 ELYMMMRDCWH 331

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 74  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 177
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 224
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 225 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 264
Query: 399 AMTKVMKECWHQNANVR 415
            +  +M++CWH   + R
Sbjct: 265 ELYMMMRDCWHAVPSQR 281

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 29  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 89  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
            +  +M++CWH   + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 141 SECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL--RHENILGYI 196
           SE +G+G Y +V   V   +G+  AVKI   +   S SR      T+     ++NIL  I
Sbjct: 18  SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFG 255
                     T+ +LV      GS+  H+ +    N  +  ++   +   L  LHT+   
Sbjct: 78  ----EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK--- 130
Query: 256 TQGKPAIAHRDIKSKNILVKTN---GTCVIADFGLAVSYSQLSNKMDIPPNPRV----GT 308
                 IAHRD+K +NIL ++        I DF L  S  +L+N       P +    G+
Sbjct: 131 -----GIAHRDLKPENILCESPEKVSPVKICDFDLG-SGMKLNNSCTPITTPELTTPCGS 184
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             YM+PE+++   +   F   K+ D+++LG+VL+
Sbjct: 185 AEYMAPEVVEVFTDQATFYD-KRCDLWSLGVVLY 217

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 33  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 90  SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     L  + D   N +
Sbjct: 147 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA--RDMLDKEFDSVHN-K 195
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 196 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 243
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 244 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 284

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 22  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 82  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 134 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 185
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 186 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 232
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 233 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 272
Query: 399 AMTKVMKECWHQNANVR 415
            +  +M++CWH   + R
Sbjct: 273 ELYMMMRDCWHAVPSQR 289

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 29  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 89  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
            +  +M++CWH   + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           IG G YG              VW+ + +G     +      E +  RE        L+H 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
           NI+ Y   D     + T L++V  Y   G L   + + T     L+   ++++   +   
Sbjct: 66  NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L   H     + G   + HRD+K  N+ +       + DFGLA    ++ N         
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDTSFAKTF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           VGT  YMSPE       M+     +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 21  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 81  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 184
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 185 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 231
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 232 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 271
Query: 399 AMTKVMKECWH 409
            +  +M++CWH
Sbjct: 272 ELYMMMRDCWH 282

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 29  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 89  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
            +  +M++CWH   + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIF------FSRDEASWSRETEIYSTVLLRHENIL 193
           + IG+G    V R V    G   AVKI        S ++    RE     T +LR     
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
            +I + + S  S + ++LV      G L+D+L  +  L+  +   I  S++  +  LH  
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K +NIL+  N    ++DFG +          ++      GT  Y+
Sbjct: 220 --------NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL-----CGTPGYL 266
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PEIL  S++       K+ D++A G++L+
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILF 296

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTEI 253
               T      +L+LV  + S   L D ++ + L    +  I      ++ GL   H+  
Sbjct: 72  DVIHTE----NKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR 310
                   + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  
Sbjct: 126 -------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLW 171
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           Y +PEIL     + C       DI++LG +  E+  R
Sbjct: 172 YRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G           VAVK+  S    +D +    E E+  
Sbjct: 18  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
            ++ +H+NI+  +G+       CTQ   L+++  Y S G+L ++L               
Sbjct: 78  -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
                 L+   ++     +  G+ +L ++           HRD+ ++N+LV  +    IA
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 181
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           DFGLA     + Y + +    +P        ++M+PE L + I         ++D+++ G
Sbjct: 182 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 228
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE         IF    +PY   VP++  F  +++   +D+            +  N
Sbjct: 229 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 268
Query: 399 AMTKVMKECWH 409
            +  +M++CWH
Sbjct: 269 ELYMMMRDCWH 279

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT Y   GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL          +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A  IS+ + +G G +GEV  G   +   + ++V I      +  +    +  E  I    
Sbjct: 32  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 90
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
              H NI+   G    S+     + +VT Y   GSL   L +        Q++ +   I 
Sbjct: 91  -FDHPNIIRLEGVVTKSK----PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
           +G+ +L    +         HRD+ ++NIL+ +N  C ++DFGL+         +Y+   
Sbjct: 146 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
            K+ I         R+ SPE +        +  F  A D+++ G+VLWEV          
Sbjct: 198 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 232
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
              + PY ++   D        +  +D+   + P          A+ ++M +CW ++ N 
Sbjct: 233 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 281
Query: 415 RLSALRVKKTLIKL 428
           R    ++   L KL
Sbjct: 282 RPKFEQIVSILDKL 295

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
           T+    + KI +SIV  L HLH+++       ++ HRD+K  N+L+   G   + DFG++
Sbjct: 105 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKMCDFGIS 157
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                     D+  +   G K YM+PE ++  +N   +    K+DI++LG+ + E+ 
Sbjct: 158 GYLVD-----DVAKDIDAGCKPYMAPERINPELNQKGYSV--KSDIWSLGITMIELA 207

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTEI 253
               T      +L+LV  + S   L D ++ + L    +  I      ++ GL   H+  
Sbjct: 71  DVIHTE----NKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR 310
                   + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  
Sbjct: 125 -------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLW 170
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           Y +PEIL     + C       DI++LG +  E+  R
Sbjct: 171 YRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 133 TLAKQISLSECIGKGRYGEVWRG--VWHGENVAVK------IFFSRDEASWSRETEIYST 184
           TLA    + + IG+G++ EV+R   +  G  VA+K      +  ++  A   +E ++   
Sbjct: 30  TLA-NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSI 242
             L H N++ Y  S     N    +  +        +  H  +    +    + K  + +
Sbjct: 89  --LNHPNVIKYYAS-FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
            + L H+H+          + HRDIK  N+ +   G   + D GL   +S  +       
Sbjct: 146 CSALEHMHSR--------RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---- 193
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +  VGT  YMSPE + E  N   F    K+DI++LG +L+E+ 
Sbjct: 194 HSLVGTPYYMSPERIHE--NGYNF----KSDIWSLGCLLYEMA 230

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 41/239 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFF-----SRDEASWSRETEIY 182
           + R + ++  L + +GKG YG VW+ +    GE VAVK  F     S D     RE  I 
Sbjct: 3   VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMIL 62
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
            T L  HENI+  +  ++   ++   ++LV  Y     L+  +    L       +   +
Sbjct: 63  -TELSGHENIVNLL--NVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQL 118
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY---SQLSNKMD 299
           +  + +LH+          + HRD+K  NIL+       +ADFGL+ S+    +++N + 
Sbjct: 119 IKVIKYLHS--------GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 300 IPPNPR--------------VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  N                V T+ Y +PEIL     +   +  K  D+++LG +L E+
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEIL-----LGSTKYTKGIDMWSLGCILGEI 224

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A  IS+ + +G G +GEV  G   +   + ++V I      +  +    +  E  I    
Sbjct: 15  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 73
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
              H NI+   G    S+     + +VT Y   GSL   L +        Q++ +   I 
Sbjct: 74  -FDHPNIIRLEGVVTKSK----PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
           +G+ +L    +         HRD+ ++NIL+ +N  C ++DFGL+         +Y+   
Sbjct: 129 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
            K+ I         R+ SPE +        +  F  A D+++ G+VLWEV          
Sbjct: 181 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 215
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
              + PY ++   D        +  +D+   + P          A+ ++M +CW ++ N 
Sbjct: 216 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 264
Query: 415 RLSALRVKKTLIKL 428
           R    ++   L KL
Sbjct: 265 RPKFEQIVSILDKL 278

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
           E +G+G    V R +     +  AVKI        FS +E    RE  +    +LR    
Sbjct: 10  EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
           H NI+    +  T+    T  +LV      G L+D+L  + TL+  +  KI  +++  + 
Sbjct: 70  HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            LH        K  I HRD+K +NIL+  +    + DFG +          ++      G
Sbjct: 126 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-----CG 172
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           T  Y++PEI++ S+N +     K+ D+++ G++++
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 207

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 142 ECIGKGRYGEVWRGVWHGE--NVAVKI--FFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           +C+G+G +G V+      +  N A+K     +R+ A      E+ +   L H  I+ Y  
Sbjct: 11  QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 198 S--------DMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQM---MKICLSIVNG 245
           +         +   +    L++        +L D +N R T+   +    + I L I   
Sbjct: 71  AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI-PPNP 304
           +  LH++         + HRD+K  NI    +    + DFGL  +  Q   +  +  P P
Sbjct: 131 VEFLHSK--------GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 305 -------RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                  +VGTK YMSP    E I+ + +    K DI++LGL+L+E+
Sbjct: 183 AYARHTGQVGTKLYMSP----EQIHGNSYSH--KVDIFSLGLILFEL 223

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
           +G G YGEV   +    G   A+KI       + S    +   V     L H NI+    
Sbjct: 29  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                RN     +LV   +  G L+D +  R   +      I   +++G  +LH      
Sbjct: 89  FFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH------ 138
Query: 257 QGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
             K  I HRD+K +N+L+++   +    I DFGL+  + ++  KM      R+GT  Y++
Sbjct: 139 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM----KERLGTAYYIA 191
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+L +  +  C       D+++ G++L+
Sbjct: 192 PEVLRKKYDEKC-------DVWSCGVILY 213

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L + +G G++GEVW   ++    VAVK       +  +   E      L+H+ ++ 
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
                + +  +   ++++T + + GSL D L     +   + K+      I  G+  +  
Sbjct: 74  ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  +  C IADFGLA          D     R G K  
Sbjct: 130 RNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREGAKFP 175
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
            ++ +P    E+IN   F    K+D+++ G++L E+ 
Sbjct: 176 IKWTAP----EAINFGSFTI--KSDVWSFGILLMEIV 206

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
           +G G YGEV   +    G   A+KI       + S    +   V     L H NI+    
Sbjct: 12  LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                RN     +LV   +  G L+D +  R   +      I   +++G  +LH      
Sbjct: 72  FFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH------ 121
Query: 257 QGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
             K  I HRD+K +N+L+++   +    I DFGL+  + ++  KM      R+GT  Y++
Sbjct: 122 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM----KERLGTAYYIA 174
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+L +  +  C       D+++ G++L+
Sbjct: 175 PEVLRKKYDEKC-------DVWSCGVILY 196

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
           +R  L+   ++KI       + H+H +      KP I HRD+K +N+L+   GT  + DF
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ------KPPIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 286 GLAV--------SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
           G A         S+S     +      R  T  Y +PEI+D   N   F   +K DI+AL
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN---FPIGEKQDIWAL 239
Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTL 397
           G +L+ +C R                       F+D  K+  ++ +  + P+    D+  
Sbjct: 240 GCILYLLCFRQHP--------------------FEDGAKLRIVNGKYSIPPH----DTQY 275
Query: 398 NAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
                +++     N   RLS   V   L ++A A
Sbjct: 276 TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG-- 197
           E IG G +G+V++      G+   +K     +E +   E E+ +   L H NI+ Y G  
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA---EREVKALAKLDHVNIVHYNGCW 73
Query: 198 ----------SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVN 244
                     S  +SR+    L++   +   G+L   + +     L+    +++   I  
Sbjct: 74  DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ ++H++         + +RD+K  NI +       I DFGL  S      K D     
Sbjct: 134 GVDYIHSK--------KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-----KNDGKRXR 180
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             GT RYMSPE       +   +  K+ D+YALGL+L E+
Sbjct: 181 SKGTLRYMSPE------QISSQDYGKEVDLYALGLILAEL 214

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
           E +G+G    V R +     +  AVKI        FS +E    RE  +    +LR    
Sbjct: 23  EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
           H NI+    +  T+    T  +LV      G L+D+L  + TL+  +  KI  +++  + 
Sbjct: 83  HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            LH        K  I HRD+K +NIL+  +    + DFG +          ++      G
Sbjct: 139 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-----CG 185
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           T  Y++PEI++ S+N +     K+ D+++ G++++
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 126/323 (39%), Gaps = 58/323 (17%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLR------HEN 191
           IG G YG V+  R    G  VA+K     +         I STV    LLR      H N
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPI-STVREVALLRRLEAFEHPN 75
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
           ++  +    TSR        +   H    L  +L++     L    +  +    + GL  
Sbjct: 76  VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH           I HRD+K +NILV + GT  +ADFGLA  YS    +M +   P V T
Sbjct: 136 LHAN--------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--TPVVVT 182
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYK 358
             Y +PE+L +S            D++++G +  E+ RR           +   IF+   
Sbjct: 183 LWYRAPEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            P  D  P D S    R        RPV   + V      +  +++ E    N + R+SA
Sbjct: 237 LPPEDDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISA 291
Query: 419 LRVKKTLIKLACADMYIHCSDGD 441
            R        A    Y+H  +G+
Sbjct: 292 FR--------ALQHSYLHKDEGN 306

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 91  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF 147
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 148 SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 204
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 205 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 253
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 254 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 301
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 302 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 342

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 43/229 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSR----ETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A        E +I S  L
Sbjct: 48  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICL 240
            +HENI+  +G+       CT    + ++T Y  +G L + L R     L+      + L
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
                L+H  +++   QG   +A     HRD+ ++N+L+       I DFGLA      S
Sbjct: 160 ---RDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           N + +  N R+  K +M+PE +      DC  +  ++D+++ G++LWE+
Sbjct: 215 NYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 255

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
           + I L   +G+G +G+V+    H    E     VAVK      E++   + RE E+ +  
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 98
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
           +L+H++I+ + G     R     L +V  Y   G L   L                    
Sbjct: 99  MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
           L   Q++ +   +  G+V+L    F         HRD+ ++N LV       I DFG+  
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 206
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              +  Y ++  +  +P        R+M P    ESI    F +  ++D+++ G+VLWE 
Sbjct: 207 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 252
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF   K P++ L        +   + CI Q R +   R    +    +  +M
Sbjct: 253 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 293
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
           + CW +    R S   V   L  LA A
Sbjct: 294 RGCWQREPQQRHSIKDVHARLQALAQA 320

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
           + I L   +G+G +G+V+    H    E     VAVK      E++   + RE E+ +  
Sbjct: 12  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 69
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
           +L+H++I+ + G     R     L +V  Y   G L   L                    
Sbjct: 70  MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
           L   Q++ +   +  G+V+L    F         HRD+ ++N LV       I DFG+  
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 177
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              +  Y ++  +  +P        R+M P    ESI    F +  ++D+++ G+VLWE 
Sbjct: 178 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 223
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF   K P++ L        +   + CI Q R +   R    +    +  +M
Sbjct: 224 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 264
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
           + CW +    R S   V   L  LA A
Sbjct: 265 RGCWQREPQQRHSIKDVHARLQALAQA 291

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L + +G G++GEVW   ++    VAVK       +  +   E      L+H+ ++ 
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 246
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
                + +  +   ++++T + + GSL D L     +   + K+      I  G+  +  
Sbjct: 247 ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
             +         HRD+++ NILV  +  C IADFGLA          D     R G K  
Sbjct: 303 RNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREGAKFP 348
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
            ++ +PE ++       F SF  K+D+++ G++L E+ 
Sbjct: 349 IKWTAPEAIN-------FGSFTIKSDVWSFGILLMEIV 379

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A    +   E +I S  L
Sbjct: 40  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 98
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICL 240
            +HENI+  +G+       CT    + ++T Y  +G L + L R     L+      + L
Sbjct: 99  GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
                L+H  +++   QG   +A     HRD+ ++N+L+       I DFGLA      S
Sbjct: 152 ---RDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           N + +  N R+  K +M+PE +      DC  +  ++D+++ G++LWE+
Sbjct: 207 NYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 247

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
           + I L   +G+G +G+V+    H    E     VAVK      E++   + RE E+ +  
Sbjct: 18  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 75
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
           +L+H++I+ + G     R     L +V  Y   G L   L                    
Sbjct: 76  MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
           L   Q++ +   +  G+V+L    F         HRD+ ++N LV       I DFG+  
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 183
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              +  Y ++  +  +P        R+M P    ESI    F +  ++D+++ G+VLWE 
Sbjct: 184 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 229
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF   K P++ L        +   + CI Q R +   R    +    +  +M
Sbjct: 230 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 270
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
           + CW +    R S   V   L  LA A
Sbjct: 271 RGCWQREPQQRHSIKDVHARLQALAQA 297

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
           T+    + KI +SIV  L HLH+++       ++ HRD+K  N+L+   G   + DFG++
Sbjct: 149 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKMCDFGIS 201
Query: 289 -VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                 ++  +D       G K YM+PE ++  +N   +    K+DI++LG+ + E+ 
Sbjct: 202 GYLVDSVAKTID------AGCKPYMAPERINPELNQKGYSV--KSDIWSLGITMIELA 251

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 55  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 115 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 170 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 198

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 33  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 90  SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 147 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 195
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 196 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 243
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 244 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 284

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 32  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 89  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 146 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 37  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 94  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 150
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 151 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 199
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 200 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 247
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 248 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 288

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 30  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 87  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 144 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 192
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 193 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 240
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 241 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 281

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
           +  +E IG+G +G V+ G    +N   KI  +    S +R T+I          ++++  
Sbjct: 32  VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
            H N+L  +G  + S  S     +V  Y   G L + +   T N     ++   L +  G
Sbjct: 89  SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  L ++ F         HRD+ ++N ++    T  +ADFGLA     + +K     + +
Sbjct: 146 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
            G K  +    L ES+    F +  K+D+++ G++LWE+  R            PY D+ 
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
             D +       + + Q R +L   +  D     + +VM +CWH  A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 78  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 128 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           +  + +V    + +P    ES+    F     +D +  G+ LWE         +F   + 
Sbjct: 180 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 223
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           P+  L       +  + +  ID++   LP     +     +  VM +CW      R + +
Sbjct: 224 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 420 RVKKTLIKLACADM 433
            ++  L++    DM
Sbjct: 274 ALRDFLLEAQPTDM 287

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS-- 198
            +G+G +G+V   R        A+K     +E   +  +E+     L H+ ++ Y  +  
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 199 -------DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
                   MT+    + L++   Y    +LYD ++   LN    +  ++   I+  L ++
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
           H++         I HRD+K  NI +  +    I DFGLA +  +  +  K+D    P   
Sbjct: 133 HSQ--------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                 +GT  Y++ E+LD + + +     +K D+Y+LG++ +E+ 
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYN-----EKIDMYSLGIIFFEMI 225

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 31  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 91  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 146 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 174

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 30/209 (14%)
Query: 144 IGKGRYGEVWRGVWHGENVAV-------KIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           IG+G +  V++G+     V V       +     +   +  E E      L+H NI+ + 
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKG--LQHPNIVRFY 91
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFG 255
            S  ++      + LVT   + G+L  +L R  +   ++++  C  I+ GL  LHT    
Sbjct: 92  DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-- 149
Query: 256 TQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
               P I HRD+K  NI +    G+  I D GLA        K  I      GT  + +P
Sbjct: 150 ----PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI------GTPEFXAP 199
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E  +E  +       +  D+YA G    E
Sbjct: 200 EXYEEKYD-------ESVDVYAFGXCXLE 221

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 46  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 106 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 161 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 189

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR Y+D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT     GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEXMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L    +         HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 84  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 84  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
           E +G+G    V R +     +  AVKI        FS +E    RE  +    +LR    
Sbjct: 23  EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
           H NI+    +  T+    T  +LV      G L+D+L  + TL+  +  KI  +++  + 
Sbjct: 83  HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV- 306
            LH        K  I HRD+K +NIL+  +    + DFG +           + P  ++ 
Sbjct: 139 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---------LDPGEKLR 181
Query: 307 ---GTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
              GT  Y++PEI++ S+N +     K+ D+++ G++++
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 84  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 62  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL ++M    N  VG
Sbjct: 122 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEM---ANEFVG 168
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 169 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 200

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 83  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 166

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 88  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G+++ E+ +
Sbjct: 209 WSVGVIMGEMIK 220

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 18  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 78  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 133 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 161

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 78  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 128 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           +  + +V    + +P    ES+    F     +D +  G+ LWE         +F   + 
Sbjct: 180 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 223
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           P+  L       +  + +  ID++   LP     +     +  VM +CW      R + +
Sbjct: 224 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 420 RVKKTLIKLACADM 433
            ++  L++    DM
Sbjct: 274 ALRDFLLEAQPTDM 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLV-THYHS-FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  H H    +  D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G+++ E+ +
Sbjct: 209 WSVGVIMGEMIK 220

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 139 SLSECIGKGRYGEVWRGVWHGENV---AVKI--FFSRDEASWSRETEIYSTVLLRHENIL 193
           +L   IG+G +GEV   V  G  +   A KI  +F  D   + +E EI  +  L H NI+
Sbjct: 12  TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS--LDHPNII 69
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                   +    T ++LV    + G L++ + ++         +I   +++ + + H  
Sbjct: 70  RL----YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 123
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                 K  +AHRD+K +N L  T+       + DFGLA  +     KM      +VGT 
Sbjct: 124 ------KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMM---RTKVGTP 172
Query: 310 RYMSPEILDESINMDCFE 327
            Y+SP++L+     +C E
Sbjct: 173 YYVSPQVLEGLYGPECDE 190

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 15  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 75  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 130 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 158

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 27  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 87  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 142 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 170

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRET------EIYSTVLLRHENIL 193
           + +G G +G V +GVW   GE++ + +     E    R++       + +   L H +I+
Sbjct: 37  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G         + L LVT Y   GSL DH+  +R  L    ++   + I  G+ +L  
Sbjct: 97  RLLG-----LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HR++ ++N+L+K+     +ADFG+A
Sbjct: 152 H--------GMVHRNLAARNVLLKSPSQVQVADFGVA 180

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 86  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 146 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 192
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 193 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 224

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 78  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 138 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 184
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 185 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 216

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 72  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 121
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 122 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           +  + +V    + +P    ES+    F     +D +  G+ LWE         +F   + 
Sbjct: 174 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 217
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           P+  L       +  + +  ID++   LP     +     +  VM +CW      R + +
Sbjct: 218 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 267
Query: 420 RVKKTLIKLACADM 433
            ++  L++    DM
Sbjct: 268 ALRDFLLEAQPTDM 281

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 181 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA---NSFVG 227
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 228 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 259

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 139 SLSECIGKGRYGEVWRGVWHGENV---AVKI--FFSRDEASWSRETEIYSTVLLRHENIL 193
           +L   IG+G +GEV   V  G  +   A KI  +F  D   + +E EI  +  L H NI+
Sbjct: 29  TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS--LDHPNII 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                   +    T ++LV    + G L++ + ++         +I   +++ + + H  
Sbjct: 87  RL----YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                 K  +AHRD+K +N L  T+       + DFGLA  +     KM      +VGT 
Sbjct: 141 ------KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMM---RTKVGTP 189
Query: 310 RYMSPEILDESINMDCFE 327
            Y+SP++L+     +C E
Sbjct: 190 YYVSPQVLEGLYGPECDE 207

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 142 ECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIG 197
           E +G+G YG V++     G  VA+K      E      T I    LL+   H NI+  I 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI- 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
            D+     C  L           + D  N+T L   Q+      ++ G+ H H       
Sbjct: 86  -DVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRYMSP 314
               I HRD+K +N+L+ ++G   +ADFGLA ++        IP       V T  Y +P
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFG-------IPVRSYTHEVVTLWYRAP 188
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
           ++L     M   +     DI+++G +  E+
Sbjct: 189 DVL-----MGSKKYSTSVDIWSIGCIFAEM 213

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            L + IG G +G   + R     E VAVK     ++   + + EI +   LRH NI+ + 
Sbjct: 22  ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              +T     T L +V  Y S G L++ + N    +  +       +++G+ + H     
Sbjct: 82  EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                 +AHRD+K +N L+  +      IADFG    YS+ S  +   P   VGT  Y++
Sbjct: 135 -----QVAHRDLKLENTLLDGSPAPRLKIADFG----YSKAS-VLHSQPKSAVGTPAYIA 184
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+L     +      K AD+++ G+ L+
Sbjct: 185 PEVL-----LKKEYDGKVADVWSCGVTLY 208

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRET------EIYSTVLLRHENIL 193
           + +G G +G V +GVW   GE++ + +     E    R++       + +   L H +I+
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G         + L LVT Y   GSL DH+  +R  L    ++   + I  G+ +L  
Sbjct: 79  RLLG-----LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HR++ ++N+L+K+     +ADFG+A
Sbjct: 134 H--------GMVHRNLAARNVLLKSPSQVQVADFGVA 162

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  + S       D    T +    +      ++ GL   H+   
Sbjct: 72  DVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 126 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 142 ECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIG 197
           E +G+G YG V++     G  VA+K      E      T I    LL+   H NI+  I 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI- 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
            D+     C  L           + D  N+T L   Q+      ++ G+ H H       
Sbjct: 86  -DVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRYMSP 314
               I HRD+K +N+L+ ++G   +ADFGLA ++        IP       V T  Y +P
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFG-------IPVRSYTHEVVTLWYRAP 188
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
           ++L     M   +     DI+++G +  E+
Sbjct: 189 DVL-----MGSKKYSTSVDIWSIGCIFAEM 213

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 141 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 193 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 237
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 238 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 279
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 280 NPKMRPSFLEI 290

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
           + C   ++V  Y +F               GSL   L +      Q++ K+ ++++ GL 
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YMSPE L  +          ++DI+++GL L E+ 
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 70/301 (23%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A +I + + IG G  GEV  G   V    +V V I      +  R    +  E  I    
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ- 106
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC--LSIV 243
              H NI+   G     R +     +VT Y   GSL D   RT      +M++   L  V
Sbjct: 107 -FDHPNIIRLEGVVTRGRLAM----IVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGV 160
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
              +   +++          HRD+ ++N+LV +N  C ++DFGL+         +Y+   
Sbjct: 161 GAGMRYLSDL-------GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
            K+ I         R+ +PE +        F +F  A D+++ G+V+WEV     A G  
Sbjct: 214 GKIPI---------RWTAPEAI-------AFRTFSSASDVWSFGVVMWEVL----AYG-- 251
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
              + PY ++          R VI   ++   LP         +A+ ++M +CWH++   
Sbjct: 252 ---ERPYWNMT--------NRDVISSVEEGYRLP---APMGCPHALHQLMLDCWHKDRAQ 297
Query: 415 R 415
           R
Sbjct: 298 R 298

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NIL+       + DFG+A + +   N +       +
Sbjct: 130 NFSHQN--------GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV-XQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +      +  D    T +    +      ++ GL   H+   
Sbjct: 72  DVIHTE----NKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  + S       D    T +    +      ++ GL   H+   
Sbjct: 70  DVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 124 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 13  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 73  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 127 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 177 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 204

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 76  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 130 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 179
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 180 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 207

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 108
Query: 200 MTSRNSCTQL---WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           +    +  Q+   +LVTH      LY  L    L++  +      I+ GL ++H+     
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---- 163
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI
Sbjct: 164 ----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEI 218
Query: 317 LDESINMDCFESFKKADIYALGLVLWEV 344
           +   +N   +   K  DI+++G +L E+
Sbjct: 219 M---LNSKGYT--KSIDIWSVGCILAEM 241

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 16  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 76  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 132 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 184 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 228
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 229 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 270
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 271 NPKMRPSFLEI 281

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 141 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 193 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 237
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 238 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 279
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 280 NPKMRPSFLEI 290

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 18  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 78  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 134 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 186 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 230
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 231 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 272
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 273 NPKMRPSFLEI 283

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 168
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 169 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 12  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 72  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 128 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 180 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 224
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 225 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 266
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 267 NPKMRPSFLEI 277

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 18  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 78  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 134 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 186 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 230
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 231 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 272
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 273 NPKMRPSFLEI 283

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 70  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 173
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 174 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 19  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 79  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 135 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 187 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 231
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 232 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 273
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 274 NPKMRPSFLEI 284

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY-HSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTE 252
               T      +L+LV  + H    L D ++ + L    +  I      ++ GL   H+ 
Sbjct: 69  DVIHTE----NKLYLVFEFLHQ--DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTK 309
                    + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T 
Sbjct: 123 --------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTL 167
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            Y +PEIL     + C       DI++LG +  E+  R
Sbjct: 168 WYRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 74/313 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLR 188
           ++I++S  +G+G +G V+ GV  G         VA+K     + AS     E  +   + 
Sbjct: 47  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 104
Query: 189 HE----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH--------- 233
            E    +++  +G     + +   + L+T     G L  +L   R  + ++         
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 161 KMIQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+    
Sbjct: 213 TDYYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA 259
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
                    + PY  L           +V+    +  +L      D+  + + ++M+ CW
Sbjct: 260 ---------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCW 299
Query: 409 HQNANVRLSALRV 421
             N  +R S L +
Sbjct: 300 QYNPKMRPSFLEI 312

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 10  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 70  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+     +  
Sbjct: 126 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 296 NKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
                    R G K     R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 178 XX-------RKGGKGLLPVRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 222
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 223 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLLELMRMCWQY 264
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 265 NPKMRPSFLEI 275

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 15  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 75  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+        
Sbjct: 131 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 183 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 227
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 228 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 269
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 270 NPKMRPSFLEI 280

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 72  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 71  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 125 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 13  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 73  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 127 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 174 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 204

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 71  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 125 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 70  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 168
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 169 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 72  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 48/222 (21%)
Query: 142 ECIGKGRYGE-VWRGVWHGENVAVK------IFFSRDEASWSRETEIYSTVLLRHENILG 194
           + +G G  G  V+RG++   +VAVK        F+  E    RE++        H N++ 
Sbjct: 30  DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-------EHPNVIR 82
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL--SIVNGLVHLHTE 252
           Y  ++   +     + L        +L +++ +    H  +  I L     +GL HLH+ 
Sbjct: 83  YFCTEKDRQFQYIAIELCA-----ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIADFG----LAVSYSQLSNKMDIPPN 303
                    I HRD+K  NIL+           +I+DFG    LAV     S +  +P  
Sbjct: 138 --------NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-- 187
Query: 304 PRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
              GT+ +++PE+L E    DC E+     DI++ G V + V
Sbjct: 188 ---GTEGWIAPEMLSE----DCKENPTYTVDIFSAGCVFYYV 222

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 19  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 79  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
           +++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+     +  
Sbjct: 135 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 296 NKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
                    R G K     R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 187 XX-------RKGGKGLLPVRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 231
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 232 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 273
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 274 NPKMRPSFLEI 284

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
           L + IGKG + +V   R +  G  VA+KI   + + + +   +++  V    +L H NI+
Sbjct: 16  LLKTIGKGNFAKVKLARHILTGREVAIKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  T +     L+L+  Y S G ++D+L     +   +       IV+ + + H  
Sbjct: 75  KLFEVIETEKT----LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH-- 128
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 +  I HRD+K++N+L+  +    IADFG +  ++ +  K+D       G+  Y 
Sbjct: 129 ------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT----FCGSPPYA 177
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PE+  +    D  E     D+++LG++L+
Sbjct: 178 APELF-QGKKYDGPE----VDVWSLGVILY 202

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
           LR ++D               +   A  IS+ + +G G +GEV  G   +   + ++V I
Sbjct: 19  LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
                 +  +    +  E  I       H NI+   G    S+     + +VT     GS
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEXMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
           L   L +        Q++ +   I +G+ +L              HRD+ ++NIL+ +N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM--------GAVHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
            C ++DFGL+         +Y+    K+ I         R+ SPE +        +  F 
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
            A D+++ G+VLWEV             + PY ++   D        +  +D+   + P 
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                    A+ ++M +CW ++ N R    ++   L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 45/233 (19%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSR----ETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A        E +I S  L
Sbjct: 48  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-------TLNHHQMM 236
            +HENI+  +G+       CT    + ++T Y  +G L + L R        + N     
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSY 291
           +  LS  + L+H  +++   QG   +A     HRD+ ++N+L+       I DFGLA   
Sbjct: 160 EEQLSSRD-LLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
              SN + +  N R+  K +M+PE +      DC  +  ++D+++ G++LWE+
Sbjct: 217 MNDSNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 261

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 70  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 68  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  + +V    + +P    ES+    F     +D +  G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 138 ISLSECIGKGRYGEVWRG--VWHGEN---VAVKIFFSRDEASWSRETEIYSTVL--LRHE 190
           + + + IG G +GEV  G     G+    VA+K   S       R+    ++++    H 
Sbjct: 9   VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVH 248
           N++   G    S    T + ++T +   GSL   L  N       Q++ +   I  G+ +
Sbjct: 69  NVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L    +         HR + ++NILV +N  C ++DFGL+       +  D      +G 
Sbjct: 125 LADMNY--------VHRALAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGG 174
Query: 309 K---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           K   R+ +PE +        +  F  A D+++ G+V+WEV             + PY D+
Sbjct: 175 KIPIRWTAPEAIQ-------YRKFTSASDVWSYGIVMWEVMSYG---------ERPYWDM 218
Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
              D        VI   +Q   LP      S L+   ++M +CW ++ N R    ++  T
Sbjct: 219 TNQD--------VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRNHRPKFGQIVNT 267
Query: 425 LIKL 428
           L K+
Sbjct: 268 LDKM 271

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
           L + IGKG + +V   R +  G  VA+KI   + + + +   +++  V    +L H NI+
Sbjct: 19  LLKTIGKGNFAKVKLARHILTGREVAIKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  T +     L+L+  Y S G ++D+L     +   +       IV+ + + H  
Sbjct: 78  KLFEVIETEKT----LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH-- 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 +  I HRD+K++N+L+  +    IADFG +  ++ +  K+D       G   Y 
Sbjct: 132 ------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLD----AFCGAPPYA 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PE+  +    D  E     D+++LG++L+
Sbjct: 181 APELF-QGKKYDGPE----VDVWSLGVILY 205

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYS--TVLLRHENILGYIG 197
           + IGKG +G+V       E V  AVK+   +       E  I S   VLL++      +G
Sbjct: 44  KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGT 256
               S  +  +L+ V  Y + G L+ HL R         +     I + L +LH+     
Sbjct: 104 LHF-SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---- 158
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYM 312
                I +RD+K +NIL+ + G  V+ DFGL         K +I  N       GT  Y+
Sbjct: 159 ----NIVYRDLKPENILLDSQGHIVLTDFGLC--------KENIEHNSTTSTFCGTPEYL 206
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PE+L +          +  D + LG VL+E+
Sbjct: 207 APEVLHKQ------PYDRTVDWWCLGAVLYEM 232

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 144 IGKG--RYGEVWRGVWHGENVAVKIFF---SRDEASWSRETEIYSTVLLRHENILGYIGS 198
           +G+G   Y ++  G+  G   A+K       +D     RE +++   L  H NIL  +  
Sbjct: 37  LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR--LFNHPNILRLVAY 94
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNGLVHLHTEI 253
            +  R +  + WL+  +   G+L++ + R       L   Q++ + L I  GL  +H + 
Sbjct: 95  CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG------LAVSYSQLSNKMDIPPNPRVG 307
           +        AHRD+K  NIL+   G  V+ D G      + V  S+ +  +      R  
Sbjct: 155 Y--------AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC- 205
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           T  Y +PE+   S+   C    ++ D+++LG VL+
Sbjct: 206 TISYRAPELF--SVQSHCVID-ERTDVWSLGCVLY 237

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 70/311 (22%)
Query: 138 ISLSECIGKGRYGEVWRGVWH--GEN---VAVKI----FFSRDEASWSRETEIYSTVLLR 188
           I++   IG G +GEV  G     G+    VA+K     +  +    +  E  I       
Sbjct: 24  ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 81
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
           H NI+   G    S+     + +VT Y   GSL   L  N       Q++ +   I  G+
Sbjct: 82  HPNIIHLEGVVTKSK----PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNKM 298
            +L    +         HRD+ ++NIL+ +N  C ++DFGL+         +Y+    K+
Sbjct: 138 KYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEY 357
            I         R+ +PE +        F  F  A D+++ G+V+WEV             
Sbjct: 190 PI---------RWTAPEAI-------AFRKFTSASDVWSYGIVMWEVVSYG--------- 224
Query: 358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
           + PY ++   D        VI   ++   LP+     +   A+ ++M +CW +  N R  
Sbjct: 225 ERPYWEMTNQD--------VIKAVEEGYRLPSPMDCPA---ALYQLMLDCWQKERNSRPK 273
Query: 418 ALRVKKTLIKL 428
              +   L KL
Sbjct: 274 FDEIVNMLDKL 284

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 59/237 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
           I   + IG+G +G+V +     + + +     R        D   ++ E E+    L  H
Sbjct: 17  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 75
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
            NI+  +G+       C     L+L   Y   G+L D L ++                 T
Sbjct: 76  PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+  Q++     +  G+ +L  + F         HRD+ ++NILV  N    IADFG   
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFG--- 177
Query: 290 SYSQLSNKMDIPPNPRVG--TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
               LS   ++     +G    R+M+ E L+ S+          +D+++ G++LWE+
Sbjct: 178 ----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 224

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 59/237 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
           I   + IG+G +G+V +     + + +     R        D   ++ E E+    L  H
Sbjct: 27  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 85
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
            NI+  +G+       C     L+L   Y   G+L D L ++                 T
Sbjct: 86  PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+  Q++     +  G+ +L  + F         HRD+ ++NILV  N    IADFG   
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFG--- 187
Query: 290 SYSQLSNKMDIPPNPRVG--TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
               LS   ++     +G    R+M+ E L+ S+          +D+++ G++LWE+
Sbjct: 188 ----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 234

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 70  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 124 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 71  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 125 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 82  RLLGICLTS-----TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 137 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 165

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 68  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  + +V    + +P    ES+    F     +D +  G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 51/236 (21%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
           R  AK+I  S     + IG G +GEV  G           VA+K   +       R+   
Sbjct: 20  REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 79
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
            ++++    H NI+   G        C  + ++T Y   GSL   L  N       Q++ 
Sbjct: 80  EASIMGQFDHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 135
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------V 289
           +   I +G+ +L           +  HRD+ ++NILV +N  C ++DFG++         
Sbjct: 136 MLRGIGSGMKYLSDM--------SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +Y+    K+ I         R+ +PE +        +  F  A D+++ G+V+WEV
Sbjct: 188 AYTTRGGKIPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 227

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 65/283 (22%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
             +   +GKG++G V+  R   +   +A+K+ F         E    RE EI S   LRH
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--LRH 74
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
            NIL          +   +++L+  +   G LY  L +    +  +       + + L +
Sbjct: 75  PNILRMY----NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 130
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
            H           + HRDIK +N+L+   G   IADFG +V    L  +         GT
Sbjct: 131 CHER--------KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------MCGT 176
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             Y+ PE+++   + +      K D++  G++ +E                    LV M 
Sbjct: 177 LDYLPPEMIEGKTHDE------KVDLWCAGVLCYEF-------------------LVGM- 210
Query: 369 PSFDD------MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
           P FD        R+++ +D + P     ++SD + + ++K+++
Sbjct: 211 PPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLR 249

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 73/316 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSRETEIYS----T 184
           + +   + +G G +G+V     +G +       VAVK+   + ++S  RE  +      T
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-EREALMSELKMMT 103
Query: 185 VLLRHENILGYIGSDMTSRNSCT---QLWLVTHYHSFGSLYDHL---------------N 226
            L  HENI+  +G+       CT    ++L+  Y  +G L ++L               N
Sbjct: 104 QLGSHENIVNLLGA-------CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 227 RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ--GKPAIAHRDIKSKNILVKTNGTCVIAD 284
           +  L   + + + L+  + L   +    G +     +  HRD+ ++N+LV       I D
Sbjct: 157 QKRLEEEEDLNV-LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGLA      SN + +  N R+  K +M+PE L E I         K+D+++ G++LWE 
Sbjct: 216 FGLARDIMSDSNYV-VRGNARLPVK-WMAPESLFEGIYT------IKSDVWSYGILLWE- 266
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK-- 402
                   IF     PY   +P+D +F              ++ N +  D    A  +  
Sbjct: 267 --------IFSLGVNPYPG-IPVDANF------------YKLIQNGFKMDQPFYATEEIY 305
Query: 403 -VMKECWHQNANVRLS 417
            +M+ CW  ++  R S
Sbjct: 306 IIMQSCWAFDSRKRPS 321

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A  IS+ + +G G +GEV  G   +   + ++V I      +  +    +  E  I    
Sbjct: 15  ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 73
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
              H NI+   G    S+     + +VT     GSL   L +        Q++ +   I 
Sbjct: 74  -FDHPNIIRLEGVVTKSK----PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
           +G+ +L    +         HRD+ ++NIL+ +N  C ++DFGL+         +Y+   
Sbjct: 129 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
            K+ I         R+ SPE +        +  F  A D+++ G+VLWEV          
Sbjct: 181 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 215
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
              + PY ++   D        +  +D+   + P          A+ ++M +CW ++ N 
Sbjct: 216 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 264
Query: 415 RLSALRVKKTLIKL 428
           R    ++   L KL
Sbjct: 265 RPKFEQIVSILDKL 278

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NI++       + DFG+A + +   N +       +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 53/271 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
           +GKG++G V+  R   +   +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--LRHPNILRM 79
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
                   +   +++L+  +   G LY  L +    +  +       + + L + H    
Sbjct: 80  Y----NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-- 133
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRDIK +N+L+   G   IADFG +V    L  +         GT  Y+ P
Sbjct: 134 ------KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------MCGTLDYLPP 181
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E+++   + +      K D++  G++ +E             + +P H         +  
Sbjct: 182 EMIEGKTHDE------KVDLWCAGVLCYEFLVGMPP------FDSPSHT--------ETH 221
Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
           R+++ +D + P     ++SD + + ++K+++
Sbjct: 222 RRIVNVDLKFPP----FLSDGSKDLISKLLR 248

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 68  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  + +V    + +P    ES+    F     +D +  G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 72  DVIHTE----NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
                  + HRD+K +N+L+ T G   +ADFGLA ++        +P       V T  Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            +PEIL     + C       DI++LG +  E+  R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 85  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 140 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 168

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NI++       + DFG+A + +   N +       +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 51/223 (22%)
Query: 142 ECIGKGRYGEVWRGVW--HGENV----AVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           + +G G +G V++G+W   GE V    A+KI    +  +A+     E      + H +++
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  ++       + LVT     G L  Y H ++  +    ++  C+ I  G+++L  
Sbjct: 104 RLLGVCLSP-----TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSYSQLSNKMDIPPNP 304
                     + HRD+ ++N+LVK+     I DFGLA         Y+    KM I    
Sbjct: 159 R--------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---- 206
Query: 305 RVGTKRYMSPEILDESINMDCFESFK---KADIYALGLVLWEV 344
                ++M+         ++C    K   ++D+++ G+ +WE+
Sbjct: 207 -----KWMA---------LECIHYRKFTHQSDVWSYGVTIWEL 235

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++I++S  +G+G +G V+ GV  G         V I    + AS     E  +   +  E
Sbjct: 12  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
               +++  +G     + +   + L+T     G L  +L   R  + ++         +M
Sbjct: 72  FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
           +++   I +G+ +L+   F         HRD+ ++N  V  + T  I DFG+        
Sbjct: 128 IQMAGEIADGMAYLNANKF--------VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y +   K  +P        R+MSPE L + +    F ++  +D+++ G+VLWE+      
Sbjct: 180 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 224
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                  + PY  L           +V+    +  +L      D+  + + ++M+ CW  
Sbjct: 225 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLLELMRMCWQY 266
Query: 411 NANVRLSALRV 421
           N  +R S L +
Sbjct: 267 NPKMRPSFLEI 277

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 52/233 (22%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG-- 197
           E IG G +G+V++      G+   ++     +E +   E E+ +   L H NI+ Y G  
Sbjct: 18  ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA---EREVKALAKLDHVNIVHYNGCW 74
Query: 198 -----------------------SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLN 231
                                  S  +SR+    L++   +   G+L   + +     L+
Sbjct: 75  DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 232 HHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY 291
               +++   I  G+ ++H++         + HRD+K  NI +       I DFGL  S 
Sbjct: 135 KVLALELFEQITKGVDYIHSK--------KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                K D       GT RYMSPE       +   +  K+ D+YALGL+L E+
Sbjct: 187 -----KNDGKRTRSKGTLRYMSPE------QISSQDYGKEVDLYALGLILAEL 228

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W    G+ V+V +        S+ EA      E+ +   
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
           L H N++   G  +T       + +VT     GSL D L +     HQ       + +  
Sbjct: 72  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 121
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q  +   
Sbjct: 122 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  + +V    + +P    ES+    F     +D +  G+ LWE+
Sbjct: 174 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWEM 211

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 51/236 (21%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
           R  AK+I  S     + IG G +GEV  G           VA+K   +       R+   
Sbjct: 5   REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 64
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
            ++++    H NI+   G        C  + ++T Y   GSL   L  N       Q++ 
Sbjct: 65  EASIMGQFDHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 120
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------V 289
           +   I +G+ +L    +         HRD+ ++NILV +N  C ++DFG++         
Sbjct: 121 MLRGIGSGMKYLSDMSY--------VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +Y+    K+ I         R+ +PE +        +  F  A D+++ G+V+WEV
Sbjct: 173 AYTTRGGKIPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 212

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 168 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 213

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 83  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 166

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 84  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 82  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 137 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 165

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++S  + +G G +G+V     +G         VAVK+       +  RE       L+  
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-ERE------ALMSE 76
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
             +L Y+G+ M   N   +CT      ++T Y  +G L + L R   + +       I  
Sbjct: 77  LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                L       F  Q    +A        HRD+ ++NIL+       I DFGLA    
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
             SN + +  N R+  K +M+PE +      +C  +F ++D+++ G+ LWE         
Sbjct: 197 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 239
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
           +F    +PY  + P+D  F  M K    +  R + P    ++     M  +MK CW
Sbjct: 240 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 285

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 36/224 (16%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
            +G+G +G+V   R        A+K     +E   +  +E+     L H+ ++ Y  + +
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 201 TSRN---------SCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
             RN           + L++   Y    +LYD ++   LN    +  ++   I+  L ++
Sbjct: 73  ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
           H++         I HR++K  NI +  +    I DFGLA +  +  +  K+D    P   
Sbjct: 133 HSQ--------GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
                 +GT  Y++ E+LD + + +     +K D Y+LG++ +E
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYN-----EKIDXYSLGIIFFE 223

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
           L + +G G +G+V  G     G  VAVKI   +   S         EI +  L RH +I+
Sbjct: 20  LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTE 252
                  T     + +++V  Y S G L+D++ +   L+  +  ++   I++G+ + H  
Sbjct: 80  KLYQVISTP----SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKR 310
           +        + HRD+K +N+L+  +    IADFG       LSN M      R   G+  
Sbjct: 136 M--------VVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRXSCGSPN 180
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           Y +PE++   +      +  + DI++ G++L+
Sbjct: 181 YAAPEVISGRLY-----AGPEVDIWSSGVILY 207

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 70  NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NI++       + DFG+A + +   N +       +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 51/223 (22%)
Query: 142 ECIGKGRYGEVWRGVW--HGENV----AVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
           + +G G +G V++G+W   GE V    A+KI    +  +A+     E      + H +++
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  ++       + LVT     G L  Y H ++  +    ++  C+ I  G+++L  
Sbjct: 81  RLLGVCLSP-----TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSYSQLSNKMDIPPNP 304
                     + HRD+ ++N+LVK+     I DFGLA         Y+    KM I    
Sbjct: 136 R--------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---- 183
Query: 305 RVGTKRYMSPEILDESINMDCFESFK---KADIYALGLVLWEV 344
                ++M+         ++C    K   ++D+++ G+ +WE+
Sbjct: 184 -----KWMA---------LECIHYRKFTHQSDVWSYGVTIWEL 212

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 164

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +  G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 21  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 81  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 83  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 88  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 171

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVL--L 187
           A  I + + IG G +GEV  G           VA+K   +       R+    ++++   
Sbjct: 7   ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNG 245
            H NI+   G        C  + ++T Y   GSL   L  N       Q++ +   I +G
Sbjct: 67  DHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNK 297
           + +L    +         HRD+ ++NILV +N  C ++DFG++         +Y+    K
Sbjct: 123 MKYLSDMSY--------VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           + I         R+ +PE +        +  F  A D+++ G+V+WEV
Sbjct: 175 IPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 206

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
           T+    + KI +SIV  L HLH+++       ++ HRD+K  N+L+   G     DFG++
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKXCDFGIS 184
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                     D+  +   G K Y +PE ++  +N   +    K+DI++LG+   E+ 
Sbjct: 185 GYLVD-----DVAKDIDAGCKPYXAPERINPELNQKGYSV--KSDIWSLGITXIELA 234

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +  G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+T    FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 88  RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 77  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+     +
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                      R G K     R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 183 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
           +          PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 230 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N N+R + L +   L
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLL 286

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 27  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 87  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NI++       + DFG+A + +   N +       +
Sbjct: 147 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 197
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 198 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 229

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++S  + +G G +G+V     +G         VAVK+       +  RE       L+  
Sbjct: 42  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 94
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
             +L Y+G+ M   N   +CT      ++T Y  +G L + L R   + +       I  
Sbjct: 95  LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                L       F  Q    +A        HRD+ ++NIL+       I DFGLA    
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
             SN + +  N R+  K +M+PE +      +C  +F ++D+++ G+ LWE         
Sbjct: 215 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 257
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
           +F    +PY  + P+D  F  M K    +  R + P    ++     M  +MK CW
Sbjct: 258 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 303

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++S  + +G G +G+V     +G         VAVK+       +  RE       L+  
Sbjct: 40  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 92
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
             +L Y+G+ M   N   +CT      ++T Y  +G L + L R   + +       I  
Sbjct: 93  LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 152
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                L       F  Q    +A        HRD+ ++NIL+       I DFGLA    
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
             SN + +  N R+  K +M+PE +      +C  +F ++D+++ G+ LWE         
Sbjct: 213 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 255
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
           +F    +PY  + P+D  F  M K    +  R + P    ++     M  +MK CW
Sbjct: 256 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 301

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 56/242 (23%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
           +   + +G G +G+V      G         VAVK+  S   A    +   E +I S  L
Sbjct: 33  LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 91
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI- 242
            +HENI+  +G+       CT    + ++T Y  +G L + L R       M+   L+  
Sbjct: 92  GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKA---EAMLGPSLAPG 141
Query: 243 ---------------VNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVI 282
                          +  L+H  +++   QG   +A     HRD+ ++N+L+       I
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
            DFGLA      SN + +  N R+  K +M+PE +      DC  +  ++D+++ G++LW
Sbjct: 200 GDFGLARDIMNDSNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLW 251
Query: 343 EV 344
           E+
Sbjct: 252 EI 253

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 49/227 (21%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSRDEASWSRETEIYSTVLL 187
           ++  + IG G +GEV++G+    +      VA+K     +  +    +  E  I      
Sbjct: 46  VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ--F 103
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNG 245
            H NI+   G      +    + ++T Y   G+L   L       +  Q++ +   I  G
Sbjct: 104 SHHNIIRLEGVI----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNK 297
           + +L    +         HRD+ ++NILV +N  C ++DFGL+         +Y+    K
Sbjct: 160 MKYLANMNY--------VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           + I         R+ +P    E+I+   F S   +D+++ G+V+WEV
Sbjct: 212 IPI---------RWTAP----EAISYRKFTS--ASDVWSFGIVMWEV 243

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
           Q  +A++ + L+  +G+G +GEV+ GV+    GE + V +   + + +   + +  S  +
Sbjct: 2   QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
               L H +I+  IG            W++   + +G L  +L  N+ +L    ++   L
Sbjct: 62  IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
            I   + +L +            HRDI  +NILV +     + DFGL+        Y   
Sbjct: 117 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             ++ I         ++MSP    ESIN   F +   +D++   + +WE+
Sbjct: 169 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 203

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++S  + +G G +G+V     +G         VAVK+       +  RE       L+  
Sbjct: 47  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 99
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
             +L Y+G+ M   N   +CT      ++T Y  +G L + L R   + +       I  
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                L       F  Q    +A        HRD+ ++NIL+       I DFGLA    
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
             SN + +  N R+  K +M+PE +      +C  +F ++D+++ G+ LWE         
Sbjct: 220 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 262
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
           +F    +PY  + P+D  F  M K    +  R + P    ++     M  +MK CW
Sbjct: 263 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 308

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+       E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+       E      T I    LL+   H NI+  +
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 68  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL     + C       DI++LG +  E+  R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
           L+ +  L E +G G   EV   R +    +VAVK+     +RD + + R   E  +   L
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
            H  I+    +      +    ++V  Y    +L D ++    +   + +++       L
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
              H           I HRD+K  NI++       + DFG+A + +   N +       +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT +Y+SP    E    D  ++  ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 140 LSECIGKGRYGEVWRGVWHGENVAVKIFF----------SRDEASWSRETEIYSTVLLRH 189
           + + +G+G YG+V + V   E +  +                EA+  +E ++     LRH
Sbjct: 9   MGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR--LRH 65
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFG--SLYDHLNRTTLNHHQMMKICLSIVNGLV 247
           +N++  +  D+       ++++V  Y   G   + D +        Q       +++GL 
Sbjct: 66  KNVIQLV--DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +LH++         I H+DIK  N+L+ T GT  I+  G+A +    +   D       G
Sbjct: 124 YLHSQ--------GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA--ADDTCRTSQG 173
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +  +  PEI +    +D F  F K DI++ G+ L+ +
Sbjct: 174 SPAFQPPEIAN---GLDTFSGF-KVDIWSAGVTLYNI 206

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
           Q  +A++ + L+  +G+G +GEV+ GV+    GE + V +   + + +   + +  S  +
Sbjct: 18  QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
               L H +I+  IG            W++   + +G L  +L  N+ +L    ++   L
Sbjct: 78  IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
            I   + +L +            HRDI  +NILV +     + DFGL+        Y   
Sbjct: 133 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             ++ I         ++MSP    ESIN   F +   +D++   + +WE+
Sbjct: 185 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 219

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M+    P V T+ Y +PE++   + M   E+    
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMME----PEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWE-VCRR 347
           DI+++G ++ E VC +
Sbjct: 207 DIWSVGCIMGEMVCHK 222

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + S  +N M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ +
Sbjct: 173 TAS--TNFM---MTPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGELVK 218

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
           Q  +A++ + L+  +G+G +GEV+ GV+    GE + V +   + + +   + +  S  +
Sbjct: 6   QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
               L H +I+  IG            W++   + +G L  +L  N+ +L    ++   L
Sbjct: 66  IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
            I   + +L +            HRDI  +NILV +     + DFGL+        Y   
Sbjct: 121 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             ++ I         ++MSP    ESIN   F +   +D++   + +WE+
Sbjct: 173 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 207

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
           A +I + + IG G  GEV  G   V    +V V I      +  R    +  E  I    
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ- 106
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC--LSIV 243
              H NI+   G     R +     +VT Y   GSL D   RT      +M++   L  V
Sbjct: 107 -FDHPNIIRLEGVVTRGRLAM----IVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGV 160
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
              +   +++          HRD+ ++N+LV +N  C ++DFGL+       +       
Sbjct: 161 GAGMRYLSDL-------GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
            ++   R+ +PE +        F +F  A D+++ G+V+WEV     A G     + PY 
Sbjct: 214 GKIPI-RWTAPEAI-------AFRTFSSASDVWSFGVVMWEVL----AYG-----ERPYW 256
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           ++          R VI   ++   LP         +A+ ++M +CWH++   R
Sbjct: 257 NMT--------NRDVISSVEEGYRLP---APMGCPHALHQLMLDCWHKDRAQR 298

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 54/286 (18%)
Query: 143 CIGKGRYGEVWRGVW--HGEN---VAVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
            IGKG +G V+ G +    +N    A+K   SR       E  +   +L+R   H N+L 
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTE 252
            IG  M        + L   Y   G L   +     N     ++   L +  G+ +L  +
Sbjct: 87  LIGI-MLPPEGLPHVLLP--YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
            F         HRD+ ++N ++  + T  +ADFGLA          DI        +++ 
Sbjct: 144 KF--------VHRDLAARNCMLDESFTVKVADFGLA---------RDILDREYYSVQQHR 186
Query: 313 SPEILDESINMDCFESFK---KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
              +  +   ++  ++++   K+D+++ G++LWE+  R            PY  + P D 
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG---------APPYRHIDPFDL 237
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           +         + Q R +    +  DS    + +VM++CW  +  VR
Sbjct: 238 TH-------FLAQGRRLPQPEYCPDS----LYQVMQQCWEADPAVR 272

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 71/307 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +++L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K     
Sbjct: 82  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKD 139
Query: 243 VNGLVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
              L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA        
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA-------- 191
Query: 297 KMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE     
Sbjct: 192 -RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE----- 238
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
               IF    +PY   V +D  F   R++    + R         D T   M + M +CW
Sbjct: 239 ----IFSLGASPYPG-VKIDEEF--XRRLKEGTRMR-------APDYTTPEMYQTMLDCW 284
Query: 409 HQNANVR 415
           H   + R
Sbjct: 285 HGEPSQR 291

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G  E+ R    G+N    VAVK +  S  +     + EI     L  + I+ Y 
Sbjct: 15  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
           G  ++      +L LV  Y   G L D L  +R  L+  +++     I  G+ +L     
Sbjct: 75  G--VSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
              G     HRD+ ++NILV++     IADFGLA     L     +   P      + +P
Sbjct: 128 ---GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
           E L ++I        +++D+++ G+VL+E+
Sbjct: 184 ESLSDNIFS------RQSDVWSFGVVLYEL 207

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 57/236 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
           I   + IG+G +G+V +     + + +     R        D   ++ E E+    L  H
Sbjct: 24  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 82
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
            NI+  +G+       C     L+L   Y   G+L D L ++                 T
Sbjct: 83  PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+  Q++     +  G+ +L  + F         HR++ ++NILV  N    IADFGL+ 
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQF--------IHRNLAARNILVGENYVAKIADFGLSR 187
Query: 290 SYSQLSNK-MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                  K M   P       R+M+ E L+ S+          +D+++ G++LWE+
Sbjct: 188 GQEVYVKKTMGRLP------VRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 231

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++S  + +G G +G+V     +G         VAVK+       +  RE       L+  
Sbjct: 47  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 99
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
             +L Y+G+ M   N   +CT      ++T Y  +G L + L R   + +       I  
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                L       F  Q    +A        HRD+ ++NIL+       I DFGLA    
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
             SN + +  N R+  K +M+PE +      +C  +F ++D+++ G+ LWE         
Sbjct: 220 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 262
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
           +F    +PY  + P+D  F  M K    +  R + P    ++     M  +MK CW
Sbjct: 263 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 308

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SAXKSSDLWALGCIIYQLV 228

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 76  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 130 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 179
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL   +    + +    DI++LG +  E+  R
Sbjct: 180 EIL---LGXKYYST--AVDIWSLGCIFAEMVTR 207

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NSFVGTAQYVSPELLTEK------SASKSSDLWALGCIIYQLV 228

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V+  R    GE VA+K      E      T I    LL+   H NI+  +
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
               T      +L+LV  +         D    T +    +      ++ GL   H+   
Sbjct: 69  DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           EIL   +    + +    DI++LG +  E+  R
Sbjct: 173 EIL---LGXKYYST--AVDIWSLGCIFAEMVTR 200

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 69/310 (22%)
Query: 136 KQISLS-----ECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTV 185
           K+ISLS     E +G+ R+G+V++G   G     +  AV I   +D+A      E     
Sbjct: 21  KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 186 LLR----HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-------HLNRTTLNHHQ 234
           +LR    H N++  +G  + +++    L ++  Y S G L++       H +  + +  +
Sbjct: 81  MLRARLQHPNVVCLLG--VVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ---GKPAIAHRDIKSKNILVKTNGTCVIADFGL---- 287
            +K  L   +  VHL  +I           + H+D+ ++N+LV       I+D GL    
Sbjct: 137 TVKSALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 288 -AVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            A  Y +L     +P        R+M+PE I+    ++D       +DI++ G+VLWEV 
Sbjct: 196 YAADYYKLLGNSLLP-------IRWMAPEAIMYGKFSID-------SDIWSYGVVLWEV- 240
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
                   F     PY      D        V+ + + R VLP     D     +  +M 
Sbjct: 241 --------FSYGLQPYCGYSNQD--------VVEMIRNRQVLP---CPDDCPAWVYALMI 281
Query: 406 ECWHQNANVR 415
           ECW++  + R
Sbjct: 282 ECWNEFPSRR 291

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 69/310 (22%)
Query: 136 KQISLS-----ECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTV 185
           K+ISLS     E +G+ R+G+V++G   G     +  AV I   +D+A      E     
Sbjct: 4   KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 186 LLR----HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-------HLNRTTLNHHQ 234
           +LR    H N++  +G  + +++    L ++  Y S G L++       H +  + +  +
Sbjct: 64  MLRARLQHPNVVCLLG--VVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ---GKPAIAHRDIKSKNILVKTNGTCVIADFGL---- 287
            +K  L   +  VHL  +I           + H+D+ ++N+LV       I+D GL    
Sbjct: 120 TVKSALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 288 -AVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            A  Y +L     +P        R+M+PE I+    ++D       +DI++ G+VLWEV 
Sbjct: 179 YAADYYKLLGNSLLP-------IRWMAPEAIMYGKFSID-------SDIWSYGVVLWEV- 223
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
                   F     PY      D        V+ + + R VLP     D     +  +M 
Sbjct: 224 --------FSYGLQPYCGYSNQD--------VVEMIRNRQVLP---CPDDCPAWVYALMI 264
Query: 406 ECWHQNANVR 415
           ECW++  + R
Sbjct: 265 ECWNEFPSRR 274

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSFGS------LYDHLNRTTLNH----------HQMMKICLSIVNGLV 247
           + C   ++V  Y +F S        +H++  +L+             + K+ ++++ GL 
Sbjct: 69  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA 128
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L         K  I HRD+K  NILV + G   + DFG++    QL + M    N  VG
Sbjct: 129 YLRE-------KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 175
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           T+ YM+PE L  +          ++DI+++GL L E+ 
Sbjct: 176 TRSYMAPERLQGT------HYSVQSDIWSMGLSLVELA 207

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            L + IG G +G   + R     E VAVK     ++ + + + EI +   LRH NI+ + 
Sbjct: 22  ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              +T     T L +V  Y S G L++ + N    +  +       +++G+ + H     
Sbjct: 82  EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                 + HRD+K +N L+  +      I DFG    YS+ S+ +   P   VGT  Y++
Sbjct: 135 -----QVCHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIA 184
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+L     +      K AD+++ G+ L+
Sbjct: 185 PEVL-----LKKEYDGKVADVWSCGVTLY 208

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
           NVA+K   SR   + +     Y  ++L     H+NI+G +   +   S      +++V  
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                +    + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
           K++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    DI
Sbjct: 160 KSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
           +++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 190 --NAFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
           DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 137 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 187
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 188 -ANSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 225

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M+    P V T+ Y +PE++   + M   E+    
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMME----PEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWE-VCRR 347
           D++++G ++ E VC +
Sbjct: 207 DLWSVGCIMGEMVCHK 222

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L HLH++         + H D+K  NI +   G C + DFGL V     +   ++    +
Sbjct: 170 LAHLHSQ--------GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG-TAGAGEV----Q 216
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
            G  RYM+PE+L  S           AD+++LGL + EV 
Sbjct: 217 EGDPRYMAPELLQGSYGT-------AADVFSLGLTILEVA 249

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 118 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 170 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 206

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 117 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 169 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 205

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 141 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 193 --NSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 229

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++T +  FG+L  +L R+  N     K+    
Sbjct: 73  -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 187 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 276 LDCWHGEPSQR 286

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 169 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 214

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 115 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 167 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 203

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 116 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 168 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 204

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 213 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 258

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 71/307 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +++L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K     
Sbjct: 82  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKD 139
Query: 243 VNGLVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
              L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA        
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA-------- 191
Query: 297 KMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE     
Sbjct: 192 -RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE----- 238
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
               IF    +PY   V +D  F   R++    + R         D T   M + M +CW
Sbjct: 239 ----IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTMLDCW 284
Query: 409 HQNANVR 415
           H   + R
Sbjct: 285 HGEPSQR 291

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 77  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
            +Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 183 TAYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
                    + PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N  +R + L +   L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 137 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 187
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 188 -ANXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 225

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 169 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 214

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 122 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 172
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 173 -ANXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 210

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 143 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 194
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 195 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 231

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 145 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 197 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 233

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 141 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 193 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 229

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 43/246 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
            +++L   +   + +G G  G V ++G + G  VAVK         +  E     E++  
Sbjct: 9   FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 66
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
                 H N++ Y  S+ T R     L L     +   L +  N +  N      +  + 
Sbjct: 67  -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
           +   I +G+ HLH+          I HRD+K +NILV T             N   +I+D
Sbjct: 120 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           FGL        +      N   GT  + +PE+L+ES N+       ++ DI+++G V + 
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 344 VCRRTK 349
           +  + K
Sbjct: 232 ILSKGK 237

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 168 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 213

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 174 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 219

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 176 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 221

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 176 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 221

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 18  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 78  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HR++ ++N +V  + T  I DFG+      
Sbjct: 132 EMIQMAAEIADGMAYLNAKKF--------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 184 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 230
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
           +          PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 231 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 266
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N N+R + L +   L
Sbjct: 267 RMCWQFNPNMRPTFLEIVNLL 287

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           + +  S  M     P V T+ Y +PE++   + M   E+    DI+++G ++ E+ R
Sbjct: 213 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 258

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 85  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 140 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 168

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+ L +LH       GK  I HRD+K +NIL+  +    I DFG A   S  S +   
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
             N  VGT +Y+SPE+L E        + K +D++ALG +++++ 
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 77  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HR++ ++N +V  + T  I DFG+      
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 183 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
           +          PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 230 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N N+R + L +   L
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLL 286

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 220 SLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT 279
           +L D +NR      +   +CL I   +     E   ++G   + HRD+K  NI    +  
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIFIQIAEA-VEFLHSKG---LMHRDLKPSNIFFTMDDV 202
Query: 280 CVIADFGLAVSYSQLSNKMDI-PPNP-------RVGTKRYMSPEILDESINMDCFESFKK 331
             + DFGL  +  Q   +  +  P P       +VGTK YMSP    E I+ + +    K
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP----EQIHGNNYSH--K 256
Query: 332 ADIYALGLVLWEV 344
            DI++LGL+L+E+
Sbjct: 257 VDIFSLGLILFEL 269

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            L + IG G +G   + R     E VAVK     ++   + + EI +   LRH NI+ + 
Sbjct: 21  ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 80
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              +T     T L +V  Y S G L++ + N    +  +       +++G+ + H     
Sbjct: 81  EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 133
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                 + HRD+K +N L+  +      I DFG    YS+ S+ +   P   VGT  Y++
Sbjct: 134 -----QVCHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIA 183
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
           PE+L     +      K AD+++ G+ L+
Sbjct: 184 PEVL-----LKKEYDGKVADVWSCGVTLY 207

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
           DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 51  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
           DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           L H N++  +  ++    +   L++V    + G + +      L+  Q       ++ G+
Sbjct: 93  LDHPNVVKLV--EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGI 150
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY----SQLSNKMDIPP 302
            +LH +         I HRDIK  N+LV  +G   IADFG++  +    + LSN      
Sbjct: 151 EYLHYQ--------KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN------ 196
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
              VGT  +M+PE L E+  +    S K  D++A+G+ L+
Sbjct: 197 --TVGTPAFMAPESLSETRKI---FSGKALDVWAMGVTLY 231

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++T +  FG+L  +L R+  N     K+    
Sbjct: 73  -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 187 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 276 LDCWHGEPSQR 286

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 82/317 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 16  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 76  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 129
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 130 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 182 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 228
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
                    + PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 229 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 264
Query: 405 KECWHQNANVRLSALRV 421
           + CW  N  +R + L +
Sbjct: 265 RMCWQFNPKMRPTFLEI 281

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 83  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +G G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 83  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 52  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 106
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 107 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 158
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 159 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 207
Query: 333 DIYALGLVLWEVCR 346
           DI+++G ++ E+ +
Sbjct: 208 DIWSVGCIMGEMIK 221

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 18/207 (8%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIG 197
           + IG+G YG V     H     VA+K     +  ++ + T  EI   +  RHEN++G   
Sbjct: 49  QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
               S     +   +        LY  L    L++  +      I+ GL ++H+      
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA----- 163
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 164 ---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF-LTEXVATRWYRAPEIM 219
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 220 ---LNSKGYT--KSIDIWSVGCILAEM 241

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 77  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+      
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
             Y +   K  +P        R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 183 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
                    + PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N  +R + L +   L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
           + +  G +G V++G+W  E   VKI  +    R+  S     EI    Y    + + ++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
             +G  +TS      + L+     FG L D++  ++  +    ++  C+ I  G+ +L  
Sbjct: 88  RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
                     + HRD+ ++N+LVKT     I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G  E+ R    G+N    VAVK +  S  +     + EI     L  + I+ Y 
Sbjct: 19  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G S    R S   L LV  Y   G L D L  +R  L+  +++     I  G+ +L    
Sbjct: 79  GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 131
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
               G     HRD+ ++NILV++     IADFGLA     L     +   P      + +
Sbjct: 132 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 186
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
           PE L ++I        +++D+++ G+VL+E+
Sbjct: 187 PESLSDNIFS------RQSDVWSFGVVLYEL 211

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G  E+ R    G+N    VAVK +  S  +     + EI     L  + I+ Y 
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G S    R S   L LV  Y   G L D L  +R  L+  +++     I  G+ +L    
Sbjct: 91  GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
               G     HRD+ ++NILV++     IADFGLA     L     +   P      + +
Sbjct: 144 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 198
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
           PE L ++I        +++D+++ G+VL+E+
Sbjct: 199 PESLSDNIFS------RQSDVWSFGVVLYEL 223

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++T +  FG+L  +L R+  N     K+    
Sbjct: 73  -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 187 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 276 LDCWHGEPSQR 286

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 127/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 77  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+     +
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                      R G K     R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 183 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
                    + PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
           + CW  N  +R + L +   L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    ++  +DE  +  E  I S 
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 105 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G  E+ R    G+N    VAVK +  S  +     + EI     L  + I+ Y 
Sbjct: 18  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G S    R S   L LV  Y   G L D L  +R  L+  +++     I  G+ +L    
Sbjct: 78  GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 130
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
               G     HRD+ ++NILV++     IADFGLA     L     +   P      + +
Sbjct: 131 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 185
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
           PE L ++I        +++D+++ G+VL+E+
Sbjct: 186 PESLSDNIFS------RQSDVWSFGVVLYEL 210

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 43/246 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
            +++L   +   + +G G  G V ++G + G  VAVK         +  E     E++  
Sbjct: 9   FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 66
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
                 H N++ Y  S+ T R     L L     +   L +  N +  N      +  + 
Sbjct: 67  -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
           +   I +G+ HLH+          I HRD+K +NILV T             N   +I+D
Sbjct: 120 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           FGL               N   GT  + +PE+L+ES N+       ++ DI+++G V + 
Sbjct: 172 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 344 VCRRTK 349
           +  + K
Sbjct: 232 ILSKGK 237

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
           EC   IG+G YG+V++       G  VA+K    +        + I    +LRH      
Sbjct: 14  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
            N++        SR +  T+L LV  +      +  D +    +    +  +   ++ GL
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             LH+          + HRD+K +NILV ++G   +ADFGLA  YS       +     V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            T  Y +PE+L +S            D++++G +  E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
           EC   IG+G YG+V++       G  VA+K    +        + I    +LRH      
Sbjct: 14  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
            N++        SR +  T+L LV  +      +  D +    +    +  +   ++ GL
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             LH+          + HRD+K +NILV ++G   +ADFGLA  YS       +     V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            T  Y +PE+L +S            D++++G +  E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 144 IGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           IG G +G   + R     E VAVK          + + EI +   LRH NI+ +    +T
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
                T L ++  Y S G LY+ + N    +  +       +++G+ + H+         
Sbjct: 88  P----THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM-------- 135
Query: 261 AIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
            I HRD+K +N L+  +      I DFG    YS+ S+ +   P   VGT  Y++PE+L 
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIAPEVL- 189
Query: 319 ESINMDCFESFKKADIYALGLVLW 342
               +      K AD+++ G+ L+
Sbjct: 190 ----LRQEYDGKIADVWSCGVTLY 209

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
           EC   IG+G YG+V++       G  VA+K    +        + I    +LRH      
Sbjct: 14  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
            N++        SR +  T+L LV  +      +  D +    +    +  +   ++ GL
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             LH+          + HRD+K +NILV ++G   +ADFGLA  YS       +     V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
            T  Y +PE+L +S            D++++G +  E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 53  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 107
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 108 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 159
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA +    ++ M +   P V T+ Y +PE++   + M   E+    
Sbjct: 160 VVKSDCTLKILDFGLARTAG--TSFMMV---PFVVTRYYRAPEVI---LGMGYKEN---V 208
Query: 333 DIYALGLVLWEVCR 346
           DI+++G ++ E+ +
Sbjct: 209 DIWSVGCIMGEMIK 222

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 45  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 99
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 100 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 151
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 152 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 200
Query: 333 DIYALGLVLWE-VCRR 347
           D++++G ++ E VC +
Sbjct: 201 DLWSVGCIMGEMVCHK 216

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
           NVA+K   SR   + +     Y  ++L     H+NI+G +    T + S  +   V   +
Sbjct: 56  NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 110
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
               L D     + +  L+H +M  +   ++ G+ HLH+          I HRD+K  NI
Sbjct: 111 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 162
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
           +VK++ T  I DFGLA + +  S  M     P V T+ Y +PE++   + M   E+    
Sbjct: 163 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 211
Query: 333 DIYALGLVLWE-VCRR 347
           D++++G ++ E VC +
Sbjct: 212 DLWSVGCIMGEMVCHK 227

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 82/317 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
           ++I+L   +G+G +G V+ G    +  GE    VAVK        R+   +  E  +   
Sbjct: 14  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
               H  ++  +G     + +   + L+ H    G L  +L            R      
Sbjct: 74  FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
           +M+++   I +G+ +L+ + F         HRD+ ++N +V  + T  I DFG+     +
Sbjct: 128 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
                      R G K     R+M+PE L + +    F +   +D+++ G+VLWE+    
Sbjct: 180 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 226
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
                    + PY  L     S + + K +     +DQ           D+    +T +M
Sbjct: 227 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 262
Query: 405 KECWHQNANVRLSALRV 421
           + CW  N  +R + L +
Sbjct: 263 RMCWQFNPKMRPTFLEI 279

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 129/310 (41%), Gaps = 74/310 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +++L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 29  RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 82
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K    +
Sbjct: 83  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTPEDL 140
Query: 243 VNGLVHL-HTEIFGTQ---GKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
               + L H   +  Q   G   +A     HRD+ ++NIL+       I DFGLA     
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA----- 195
Query: 294 LSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
                DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE  
Sbjct: 196 ----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE-- 242
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
                  IF    +PY   V +D  F   R++    + R         D T   M + M 
Sbjct: 243 -------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTML 285
Query: 406 ECWHQNANVR 415
           +CWH   + R
Sbjct: 286 DCWHGEPSQR 295

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
             L H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 105 --LNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 16  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 72
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 73  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 129 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 176
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 177 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 68  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
           L + +G G +G+V  G     G  VAVKI   +   S       + EI +  L RH +I+
Sbjct: 15  LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  T     T  ++V  Y S G L+D++     +   +  ++   I++ + + H  
Sbjct: 75  KLYQVISTP----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
           +        + HRD+K +N+L+  +    IADFGL+   S      D       G+  Y 
Sbjct: 131 M--------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD-----SCGSPNYA 177
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
           +PE++   +      +  + DI++ G++L+
Sbjct: 178 APEVISGRLY-----AGPEVDIWSCGVILY 202

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 14  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 70
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 71  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 127 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 174
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 175 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 205

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 68  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K+    
Sbjct: 73  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 187 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 276 LDCWHGEPSQR 286

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 68  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 138 ISLSECIGKGRYGEVWR--GVWHGENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILG 194
           +S +E +G GR+G+V +      G  +A KI  +R        + EI     L H N++ 
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL--SIVNGLVHLHTE 252
              +   S+N      LV  Y   G L+D +   + N  ++  I     I  G+ H+H  
Sbjct: 151 LYDA-FESKNDIV---LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 253 IFGTQGKPAIAHRDIKSKNIL-VKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                 +  I H D+K +NIL V  +   + I DFGLA  Y +   K+ +      GT  
Sbjct: 205 ------QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKV----NFGTPE 253
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           +++PE+    +N D F SF   D++++G++ +
Sbjct: 254 FLAPEV----VNYD-FVSF-PTDMWSVGVIAY 279

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K+    
Sbjct: 82  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 196 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 285 LDCWHGEPSQR 295

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 68  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
             L H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 91  --LNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
           L+HEN++G +   +  TS    ++++LVT       L + +    L+   +  +   ++ 
Sbjct: 84  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL ++H+          I HRD+K  N+ V  +    I DFGLA        + D     
Sbjct: 143 GLKYIHS--------AGIIHRDLKPSNVAVNEDSELRILDFGLA-------RQADEEMTG 187
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
            V T+ Y +PEI+     ++     +  DI+++G ++ E+ +
Sbjct: 188 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 224

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
           L + +G G +G+V  G     G  VAVKI   +   S       + EI +  L RH +I+
Sbjct: 15  LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  T     T  ++V  Y S G L+D++     +   +  ++   I++ + + H  
Sbjct: 75  KLYQVISTP----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKR 310
           +        + HRD+K +N+L+  +    IADFG       LSN M      R   G+  
Sbjct: 131 M--------VVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRTSCGSPN 175
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
           Y +PE++   +      +  + DI++ G++L+
Sbjct: 176 YAAPEVISGRLY-----AGPEVDIWSCGVILY 202

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
           + +GKG +G+V   R    G   A+KI       ++DE +    T   S VL   RH  +
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
                +  T    C     V  Y + G L+ HL+R  +   +  +     IV+ L +LH+
Sbjct: 68  TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + +RDIK +N+++  +G   I DFGL          M        GT  Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
           ++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+GL HLH           I +RD+K +N+L+  +G   I+D GLAV       K   
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 GT  +M+PE +L E  +          D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+GL HLH           I +RD+K +N+L+  +G   I+D GLAV       K   
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 GT  +M+PE +L E  +          D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+GL HLH           I +RD+K +N+L+  +G   I+D GLAV       K   
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 GT  +M+PE +L E  +          D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 132 RTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYST 184
           R    +    + +GKG +G+V   +    G   A+KI       ++DE + +  TE    
Sbjct: 6   RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVL 64
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIV 243
              RH  +     S  T    C     V  Y + G L+ HL+R  +      +     IV
Sbjct: 65  QNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
           + L +LH+E         + +RD+K +N+++  +G   I DFGL     +    M     
Sbjct: 121 SALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----K 169
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
              GT  Y++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 170 XFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 208

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIY 182
           + R    +    + +GKG +G+V   +    G   A+KI       ++DE + +  TE  
Sbjct: 3   MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 61
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLS 241
                RH  +     S  T    C     V  Y + G L+ HL+R  +      +     
Sbjct: 62  VLQNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           IV+ L +LH+E         + +RD+K +N+++  +G   I DFGL     +    M   
Sbjct: 118 IVSALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--- 167
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
                GT  Y++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 168 -KXFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 207

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            IV+GL HLH           I +RD+K +N+L+  +G   I+D GLAV       K   
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 GT  +M+PE +L E  +          D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDF-------SVDYFALGVTLYEM 382

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 87/316 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 83
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLN---------------R 227
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L                +
Sbjct: 84  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
             L    ++     +  G+  L +            HRD+ ++NIL+       I DFGL
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASR--------KXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 288 AVSYSQLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGL 339
           A          DI  +P   R G  R    +M+PE I D    +       ++D+++ G+
Sbjct: 195 A---------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGV 238
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
           +LWE         IF    +PY   V +D  F   R++    + R         D T   
Sbjct: 239 LLWE---------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPE 279
Query: 400 MTKVMKECWHQNANVR 415
           M + M +CWH   + R
Sbjct: 280 MYQTMLDCWHGEPSQR 295

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K+    
Sbjct: 82  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 196 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 285 LDCWHGEPSQR 295

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 132 RTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYST 184
           R    +    + +GKG +G+V   +    G   A+KI       ++DE + +  TE    
Sbjct: 4   RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVL 62
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIV 243
              RH  +     S  T    C     V  Y + G L+ HL+R  +      +     IV
Sbjct: 63  QNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
           + L +LH+E         + +RD+K +N+++  +G   I DFGL     +    M     
Sbjct: 119 SALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----K 167
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
              GT  Y++PE+L+++      +  +  D + LG+V++E +C R
Sbjct: 168 XFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 206

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGV--WHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
           ++  +  L E IGKG +  V R V    G   A KI       +RD     RE  I    
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
           LL+H NI+     D  S       +LV    + G L+ D + R   +          I+ 
Sbjct: 59  LLKHSNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
            ++H H        +  + HRD+K +N+L+  K  G  V +ADFGLA+            
Sbjct: 115 AVLHCH--------QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLW 342
                GT  Y+SPE+L +       E++ K  DI+A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRK-------EAYGKPVDIWACGVILY 197

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 65  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 118
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K+    
Sbjct: 119 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 176
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 232
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 233 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 279
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 280 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 321
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 322 LDCWHGEPSQR 332

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 138 ISLSECIGKGRYGEVWR-----GVWHGENVAVKIFF-------SRDEASWSRETEIYSTV 185
             L   +GKG YG+V++     G   G+  A+K+         ++D A    E  I   V
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN- 244
             +H  I+  I +  T      +L+L+  Y S G L+  L R  +         L+ ++ 
Sbjct: 79  --KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIP 301
            L HLH +         I +RD+K +NI++   G   + DFGL   ++    +++     
Sbjct: 133 ALGHLHQK--------GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF--- 181
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                GT  YM+PEIL  S +       +  D ++LG +++++
Sbjct: 182 ----CGTIEYMAPEILMRSGHN------RAVDWWSLGALMYDM 214

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 138 ISLSECIGKGRYGEVWR-----GVWHGENVAVKIFF-------SRDEASWSRETEIYSTV 185
             L   +GKG YG+V++     G   G+  A+K+         ++D A    E  I   V
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN- 244
             +H  I+  I +  T      +L+L+  Y S G L+  L R  +         L+ ++ 
Sbjct: 79  --KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIP 301
            L HLH +         I +RD+K +NI++   G   + DFGL   ++    +++     
Sbjct: 133 ALGHLHQK--------GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF--- 181
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                GT  YM+PEIL  S +       +  D ++LG +++++
Sbjct: 182 ----CGTIEYMAPEILMRSGHN------RAVDWWSLGALMYDM 214

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L  V  Y + G L+ HL+R  +      +     IV+ L +LH+E         + +RD
Sbjct: 222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-------KNVVYRD 274
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +N+++  +G   I DFGL     +    M        GT  Y++PE+L+++      
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT----FCGTPEYLAPEVLEDN------ 324
Query: 327 ESFKKADIYALGLVLWE-VCRR 347
           +  +  D + LG+V++E +C R
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGR 346

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L  V  Y + G L+ HL+R  +      +     IV+ L +LH+E         + +RD
Sbjct: 225 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-------KNVVYRD 277
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +N+++  +G   I DFGL     +    M        GT  Y++PE+L+++      
Sbjct: 278 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT----FCGTPEYLAPEVLEDN------ 327
Query: 327 ESFKKADIYALGLVLWE-VCRR 347
           +  +  D + LG+V++E +C R
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGR 349

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N     K+    
Sbjct: 82  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +      L HL    F   +G   +A     HRD+ ++NIL+       I DFGLA    
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 196 -----RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 285 LDCWHGEPSQR 295

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S       +++    + G L   L  T     Q        ++
Sbjct: 90  --FNHQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 144 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 196 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 238

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 22  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 82  --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 135
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 136 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 188 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 230

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 86
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 141
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 142 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 197
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 198 ---LNSKGYT--KSIDIWSVGCILAEM 219

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE-XVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 93
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 148
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 149 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE-XVATRWYRAPEIM 204
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 205 ---LNSKGYT--KSIDIWSVGCILAEM 226

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 86
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 141
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 142 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 197
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 198 ---LNSKGYT--KSIDIWSVGCILAEM 219

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 93
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 148
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 149 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 204
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 205 ---LNSKGYT--KSIDIWSVGCILAEM 226

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L+H +M  +   ++ G+ HLH+          I HRD+K  NI+VK++ T  I DFGLA 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLA- 173
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
             +  +N M     P V T+ Y +PE++   + M    +    DI+++G ++ E+ +
Sbjct: 174 -RTACTNFM---MTPYVVTRYYRAPEVI---LGMGYAAN---VDIWSVGCIMGELVK 220

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 94
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 95  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 149
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 150 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 205
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 206 ---LNSKGYT--KSIDIWSVGCILAEM 227

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 85
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 86  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 140
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 141 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 197 ---LNSKGYT--KSIDIWSVGCILAEM 218

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 90  --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 144 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 196 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 238

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S       +++    + G L   L  T     Q        ++
Sbjct: 105 --FNHQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
            + + +G+G +G+V +  +H   G+ VA+KI      ++ +     E EI    LLRH +
Sbjct: 7   QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D+    S  ++ +V  Y +   L+D++  R  ++  +  +    I++ + + H
Sbjct: 66  IIKL--YDVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   +  I HRD+K +N+L+  +    IADFGL+   +   N +        G+  
Sbjct: 121 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 167
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
           Y +PE++   +      +  + D+++ G++L+  +CRR
Sbjct: 168 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 200

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
            + + +G+G +G+V +  +H   G+ VA+KI      ++ +     E EI    LLRH +
Sbjct: 11  QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D+    S  ++ +V  Y +   L+D++  R  ++  +  +    I++ + + H
Sbjct: 70  IIKL--YDVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   +  I HRD+K +N+L+  +    IADFGL+   +   N +        G+  
Sbjct: 125 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 171
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
           Y +PE++   +      +  + D+++ G++L+  +CRR
Sbjct: 172 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 204

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            L + IG G +G   + R     E VAVK     ++   + + EI +   LRH NI+ + 
Sbjct: 22  ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              +T     T L +V  Y S G L++ + N    +  +       +++G+ + H     
Sbjct: 82  EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K +N L+  +G+        A  YS+ S+ +   P   VGT  Y++PE
Sbjct: 135 -----QVCHRDLKLENTLL--DGSPAPRLKICAFGYSK-SSVLHSQPKSTVGTPAYIAPE 186
Query: 316 ILDESINMDCFESFKKADIYALGLVLW 342
           +L     +      K AD+++ G+ L+
Sbjct: 187 VL-----LKKEYDGKVADVWSCGVTLY 208

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 47  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 107 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 160
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 161 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 213 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 255

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 91  --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 91  --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            L + IG G +G   + R     E VAVK     ++   + + EI +   LRH NI+ + 
Sbjct: 22  ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
              +T     T L +V  Y S G L++ + N    +  +       +++G+ + H     
Sbjct: 82  EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K +N L+  +G+        A  YS+ S+ +   P   VGT  Y++PE
Sbjct: 135 -----QVCHRDLKLENTLL--DGSPAPRLKICAFGYSK-SSVLHSQPKDTVGTPAYIAPE 186
Query: 316 ILDESINMDCFESFKKADIYALGLVLW 342
           +L     +      K AD+++ G+ L+
Sbjct: 187 VL-----LKKEYDGKVADVWSCGVTLY 208

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 68/242 (28%)
Query: 144 IGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRHE----NI 192
           IG+G +G V++    G         VAVK+   ++EAS   + +      L  E    NI
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEFDNPNI 112
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT------LNHHQMM---------- 236
           +  +G     +  C    L+  Y ++G L + L   +      L+H  +           
Sbjct: 113 VKLLGVCAVGKPMC----LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 237 -------KICLS--IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
                  ++C++  +  G+ +L    F         HRD+ ++N LV  N    IADFGL
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERKF--------VHRDLATRNCLVGENMVVKIADFGL 220
Query: 288 -----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
                +  Y +      IP        R+M P    ESI  + + +  ++D++A G+VLW
Sbjct: 221 SRNIYSADYYKADGNDAIP-------IRWMPP----ESIFYNRYTT--ESDVWAYGVVLW 267
Query: 343 EV 344
           E+
Sbjct: 268 EI 269

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 37  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 97  --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 150
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 151 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 203 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 245

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V     V  G  +AVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 59  VGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
             +  TS      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 118 VFTPATSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 173
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 174 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 218
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++        DI+++G ++ E+
Sbjct: 219 APEIM-----LNWMHYNMTVDIWSVGCIMAEL 245

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 96
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 97  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 151
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 152 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 207
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 208 ---LNSKGYT--KSIDIWSVGCILAEM 229

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVKIF----FSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK        +DE  +  E  I S 
Sbjct: 57  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 117 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 170
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 171 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            SY +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 223 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 265

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 108
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 163
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 164 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 219
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 220 ---LNSKGYT--KSIDIWSVGCILAEM 241

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
           L+HEN++G +   +  TS    ++++LVT       L + +    L+   +  +   ++ 
Sbjct: 84  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL ++H+          I HRD+K  N+ V  +    I DFGLA        + D     
Sbjct: 143 GLKYIHS--------AGIIHRDLKPSNVAVNEDSELRILDFGLA-------RQADEEMTG 187
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
            V T+ Y +PEI+     ++     +  DI+++G ++ E+ +
Sbjct: 188 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 224

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               +R+      ++LVTH      L + +    L    +  +   I+ GL ++H+    
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
           I+     ++     +  DI+++G ++ E+ 
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
            + + +G+G +G+V +  +H   G+ VA+KI      ++ +     E EI    LLRH +
Sbjct: 16  QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D+    S  ++ +V  Y +   L+D++  R  ++  +  +    I++ + + H
Sbjct: 75  IIKLY--DVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   +  I HRD+K +N+L+  +    IADFGL+   +   N +        G+  
Sbjct: 130 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 176
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
           Y +PE++   +      +  + D+++ G++L+  +CRR
Sbjct: 177 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 209

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
            + + +G+G +G+V +  +H   G+ VA+KI      ++ +     E EI    LLRH +
Sbjct: 17  QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D+    S  ++ +V  Y +   L+D++  R  ++  +  +    I++ + + H
Sbjct: 76  IIKLY--DVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   +  I HRD+K +N+L+  +    IADFGL+   +   N +        G+  
Sbjct: 131 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 177
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
           Y +PE++   +      +  + D+++ G++L+  +CRR
Sbjct: 178 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 210

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR---DEASWSRETEIYSTVL---- 186
           + K     E +G G + EV   V   E    K+F  +    +A   +E+ I + +     
Sbjct: 20  IKKIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
           ++HENI+     D+    S   L+LV    S G L+D +  +          +   +++ 
Sbjct: 77  IKHENIVAL--EDIY--ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIADFGLAVSYSQLSNKMDIPP 302
           + +LH        +  I HRD+K +N+L  +       +I+DFGL    S++  K D+  
Sbjct: 133 VYYLH--------RMGIVHRDLKPENLLYYSQDEESKIMISDFGL----SKMEGKGDVMS 180
Query: 303 NPRVGTKRYMSPEILDE---SINMDCF 326
               GT  Y++PE+L +   S  +DC+
Sbjct: 181 TA-CGTPGYVAPEVLAQKPYSKAVDCW 206

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
           +GKG +G+V      G  E  A+KI   +D      + E      +  + +L  +     
Sbjct: 27  LGKGSFGKVMLADRKGTEELYAIKIL-KKDVVIQDDDVE----CTMVEKRVLALLDKPPF 81
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
           +T  +SC Q    L+ V  Y + G L  H+ +       Q +     I  GL  LH    
Sbjct: 82  LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH---- 137
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD-IPPNPRVGTKRYMS 313
               K  I +RD+K  N+++ + G   IADFG+   +      MD +      GT  Y++
Sbjct: 138 ----KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM-----MDGVTTREFCGTPDYIA 188
Query: 314 PEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           PEI+        ++ + K+ D +A G++L+E+
Sbjct: 189 PEII-------AYQPYGKSVDWWAYGVLLYEM 213

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA+K     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
             S         K  DI+++G +L E+
Sbjct: 204 LNSKGYT-----KSIDIWSVGCILAEM 225

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
           IG+G YG V       +   VA++     +  ++ + T  EI   +  RHENI+G   +D
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
           +    +  Q+  V          LY  L    L++  +      I+ GL ++H+      
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
              +N   +   K  DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
           + + L E IG+G +GEV+ G    +N  V +   R+      +A + +E  I       H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--SH 171
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN 244
            NI+  IG        CTQ   +++V      G     L      L    ++++      
Sbjct: 172 PNIVRLIG-------VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L ++           HRD+ ++N LV       I+DFG+  S  +           
Sbjct: 225 GMEYLESK--------CCIHRDLAARNCLVTEKNVLKISDFGM--SREEADGVXAASGGL 274
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           R    ++ +P    E++N   + S  ++D+++ G++LWE          F    +PY +L
Sbjct: 275 RQVPVKWTAP----EALNYGRYSS--ESDVWSFGILLWET---------FSLGASPYPNL 319
Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
                S    R+ +    + P        +   +A+ ++M++CW      R S
Sbjct: 320 -----SNQQTREFVEKGGRLP------CPELCPDAVFRLMEQCWAYEPGQRPS 361

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           IG G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 35  IGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 94  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PEI+     ++     +  DI+++G ++ E+ 
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 222

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNAMHYNQTVDIWSVGCIMAEL 216

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 66/298 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
           + + L E IG+G +GEV+ G    +N  V +   R+      +A + +E  I       H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--SH 171
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN 244
            NI+  IG        CTQ   +++V      G     L      L    ++++      
Sbjct: 172 PNIVRLIG-------VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMD 299
           G+ +L ++           HRD+ ++N LV       I+DFG++       Y+       
Sbjct: 225 GMEYLESK--------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           +P        ++ +P    E++N   + S  ++D+++ G++LWE          F    +
Sbjct: 277 VP-------VKWTAP----EALNYGRYSS--ESDVWSFGILLWET---------FSLGAS 314
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
           PY +L     S    R+ +    + P        +   +A+ ++M++CW      R S
Sbjct: 315 PYPNL-----SNQQTREFVEKGGRLP------CPELCPDAVFRLMEQCWAYEPGQRPS 361

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 91  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 147 --------DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PEI+     ++     +  DI+++G ++ E+ 
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 219

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 95  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PEI+     ++     +  DI+++G ++ E+ 
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 223

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 19/85 (22%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMDIPPNPRVGTKRYMSPEILD 318
           HRD+K +NILV  +    + DFG+A +      +QL N         VGT  Y +PE   
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--------VGTLYYXAPERFS 208
Query: 319 ESINMDCFESFKKADIYALGLVLWE 343
           ES       +  +ADIYAL  VL+E
Sbjct: 209 ES------HATYRADIYALTCVLYE 227

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 126/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
           TLA  +I   + IGKG +G V +G  V     VA+K     D    +         + E+
Sbjct: 15  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
           +    L H NI+   G             +V  +   G LY  L      +     +++ 
Sbjct: 75  FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
           L I  G+ ++  +       P I HRD++S NI +++       C  +ADFGL+      
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
            + +       +G  ++M+P    E+I  +     +KAD Y+  ++L+ +       G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
           +EY            S+  ++ +  I ++  RP +P     +     +  V++ CW  + 
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
             R     + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               +R+      ++LVTH      L + +    L    +  +   I+ GL ++H+    
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA--- 140
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 141 -----DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 188
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEV 344
           I+     ++     +  DI+++G ++ E+
Sbjct: 189 IM-----LNWMHYNQTVDIWSVGCIMAEL 212

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 99  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 154
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 155 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 199
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 200 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 226

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 85  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               +R+      ++LVTH      L + +    L    +  +   I+ GL ++H+    
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
           I+     ++     +  DI+++G ++ E+ 
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 41/257 (15%)
Query: 134 LAKQISLSECIGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRETEIYSTVLLRHE 190
           + K     E +G G + EV+  +    G+  A+K I  S      S E EI     ++HE
Sbjct: 7   IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHL 249
           NI+     D+    S T  +LV    S G L+D  L R          +   +++ + +L
Sbjct: 67  NIVTL--EDI--YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
           H        +  I HRD+K +N+L  T   N   +I DFGL  S  + +  M    +   
Sbjct: 123 H--------ENGIVHRDLKPENLLYLTPEENSKIMITDFGL--SKMEQNGIM----STAC 168
Query: 307 GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVC------RRTKANGIFEEYKA 359
           GT  Y++PE+L +       + + KA D +++G++ + +            + +FE+ K 
Sbjct: 169 GTPGYVAPEVLAQ-------KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
Query: 360 PYHDLVPMDPSFDDMRK 376
            Y++     P +DD+ +
Sbjct: 222 GYYEF--ESPFWDDISE 236

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYI 196
           + +G G YG V   V    G  VA+K  +   ++    +       LL   RHEN++G +
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 197 G--SDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
              +   + +  T  +LV  +     G L  H     L   ++  +   ++ GL ++H  
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA- 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA    Q  ++M       V T+ Y 
Sbjct: 147 -------AGIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEM----XGXVVTRWYR 192
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PE++     ++     +  DI+++G ++ E+
Sbjct: 193 APEVI-----LNWMRYTQTVDIWSVGCIMAEM 219

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 49  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 108 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 163
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 164 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 209 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 235

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGXVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           ++ L + +G+G +G+V      G         VAVK+   ++ A+ S    + S +    
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 83
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNH--------HQ 234
             IL +IG  +   N   +CT+    L ++  +  FG+L  +L R+  N           
Sbjct: 84  -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKEAPED 141
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ--GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           + K  L++ + + +      G +        HRD+ ++NIL+       I DFGLA    
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 197
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
                 DI  +P   R G  R    +M+PE I D    +       ++D+++ G++LWE 
Sbjct: 198 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 244
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
                   IF    +PY   V +D  F   R++    + R         D T   M + M
Sbjct: 245 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 286
Query: 405 KECWHQNANVR 415
            +CWH   + R
Sbjct: 287 LDCWHGEPSQR 297

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 95  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 100 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 155
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 156 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 200
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PEI+     ++     +  DI+++G ++ E+ 
Sbjct: 201 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 228

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
            +++L   +   + +G G  G V ++G + G  VAVK         +  E     E++  
Sbjct: 27  FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 84
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
                 H N++ Y  S+ T R     L L     +   L +  N +  N      +  + 
Sbjct: 85  -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
           +   I +G+ HLH+          I HRD+K +NILV T             N   +I+D
Sbjct: 138 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGL               N   GT  + +PE+L+ES       S    DI+++G V + +
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI---DIFSMGCVFYYI 246
Query: 345 CRRTK 349
             + K
Sbjct: 247 LSKGK 251

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 205 SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAH 264
            C +  +    H F    D + R  L    +  I   I + L +LH +         I H
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKL----ISNIMRQIFSALHYLHNQ--------GICH 191
Query: 265 RDIKSKNILVKTNGTCVI--ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN 322
           RDIK +N L  TN +  I   DFGL+  + +L+N        + GT  +++PE+L+ +  
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT-- 249
Query: 323 MDCFESF-KKADIYALGLVL 341
               ES+  K D ++ G++L
Sbjct: 250 ---NESYGPKCDAWSAGVLL 266

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 140 LSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVL-----LRH 189
           L + +G+G +G V  G    E+     VAVK    + + S  RE E + +         H
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSH 95
Query: 190 ENILGYIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-------HQMMKICL 240
            N++  +G   +M+S+    +  ++  +  +G L+ +L  + L           ++K  +
Sbjct: 96  PNVIRLLGVCIEMSSQG-IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            I  G+ +L    F         HRD+ ++N +++ + T  +ADFG       LS K+  
Sbjct: 155 DIALGMEYLSNRNF--------LHRDLAARNCMLRDDMTVCVADFG-------LSKKIYS 199
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
               R G    M  + I  ES+    + S  K+D++A G+ +WE+  R
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTS--KSDVWAFGVTMWEIATR 245

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 94  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           +PEI+     ++     +  DI+++G ++ E+ 
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 222

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 140 LSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR-----ETEIYSTVLLRHENI 192
           + E +G+G +G+V     +   + VA+K F SR     S      E EI    LLRH +I
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
           +       T     T + +V  Y   G L+D++  +  +   +  +    I+  + + H 
Sbjct: 72  IKLYDVITTP----TDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH- 125
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K +N+L+  N    IADFGL+   +   N +        G+  Y
Sbjct: 126 -------RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-GNFL----KTSCGSPNY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLW 342
            +PE+++  +      +  + D+++ G+VL+
Sbjct: 174 AAPEVINGKLY-----AGPEVDVWSCGIVLY 199

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 48  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 108 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 161
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 162 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 213
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             Y +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 214 AGYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 256

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
           L+HEN++G +   +  TS    ++++LVT       L + +    L+   +  +   ++ 
Sbjct: 76  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL ++H+          I HRD+K  N+ V  +    I DFGLA        + D     
Sbjct: 135 GLKYIHS--------AGIIHRDLKPSNVAVNEDCELRILDFGLA-------RQADEEMTG 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
            V T+ Y +PEI+     ++     +  DI+++G ++ E+ +
Sbjct: 180 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 216

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
            +++L   +   + +G G  G V ++G + G  VAVK         +  E     E++  
Sbjct: 27  FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 84
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
                 H N++ Y  S+ T R     L L     +   L +  N +  N      +  + 
Sbjct: 85  -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
           +   I +G+ HLH+          I HRD+K +NILV T             N   +I+D
Sbjct: 138 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           FGL               N   GT  + +PE+L+ES       S    DI+++G V + +
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI---DIFSMGCVFYYI 246
Query: 345 CRRTK 349
             + K
Sbjct: 247 LSKGK 251

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
               H+NI+  IG  + S      L L+      G L   L  T     Q        ++
Sbjct: 131 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 184
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
            +   I  G  +L    F         HRDI ++N L+   G      I DFG+A     
Sbjct: 185 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 236
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
             Y +      +P        ++M PE   E I    F S  K D ++ G++LWE+
Sbjct: 237 AGYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 279

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 139 SLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHEN 191
            L E +GKG +  V R   V  G+  A KI       +RD     RE  I    LL+H N
Sbjct: 25  QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI--CRLLKHPN 82
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D  S       +L+    + G L+ D + R   +          I+  ++H H
Sbjct: 83  IVRL--HDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG 307
                   +  + HRD+K +N+L+  K  G  V +ADFGLA+                 G
Sbjct: 139 --------QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW----FGFAG 186
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           T  Y+SPE+L +          K  D++A G++L+
Sbjct: 187 TPGYLSPEVLRKD------PYGKPVDLWACGVILY 215

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGXVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 41/159 (25%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPEI 316
           HRD+ ++NIL+  N    I DFGLA          DI  NP   R G  R    +M+PE 
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLA---------RDIYKNPDYVRKGDTRLPLKWMAPES 272
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
           + + I         K+D+++ G++LWE         IF    +PY   V MD  F     
Sbjct: 273 IFDKIYS------TKSDVWSYGVLLWE---------IFSLGGSPYPG-VQMDEDF----- 311
Query: 377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                + R  +  R    ST   + ++M +CWH++   R
Sbjct: 312 ---CSRLREGMRMRAPEYST-PEIYQIMLDCWHRDPKER 346

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           E IG+G YG V++    +GE  A+K      +    +E E   +  +R  +IL  +    
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
              ++  +L+ V H      L ++HL++   +  +++ +C             L ++NG+
Sbjct: 58  -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H           + HRD+K +N+L+   G   IADFGLA ++     K        V
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEV 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
            T  Y +P++L     M   +     DI+++G +  E+   T
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMVNGT 198

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 133 TLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
           ++  +  L E +GKG +  V R   +  G+  A KI       +RD     RE  I    
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
           LL+H NI+     D  S       +LV    + G L+ D + R   +          I+ 
Sbjct: 59  LLKHPNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
            + H H           I HRD+K +N+L+  K+ G  V +ADFGLA+            
Sbjct: 115 SVNHCHLN--------GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
                GT  Y+SPE+L +          K  D++A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRKD------PYGKPVDMWACGVILY 197

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 96  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA      +++M       V T+ Y 
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 85  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 91  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 96  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 96  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA      +++M       V T+ Y 
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 86  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 141
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 142 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 186
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 187 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 213

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 94  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 221

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 86  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 141
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 142 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 186
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 187 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 213

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 144 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 85  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               +R+      ++LVTH      L + +    L    +  +   I+ GL ++H+    
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGL           D      V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
           I+     ++     +  DI+++G ++ E+ 
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 96  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA      +++M       V T+ Y 
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 94  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 221

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 29  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 88  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 144 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 188
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 189 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 215

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 91  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 87  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 142
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 143 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 187
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 188 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 214

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 63/235 (26%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFF------SRDEASWSRETEIYS 183
           ++ AK+    + +G+G++  V++      N  VA+K         ++D  + +   EI  
Sbjct: 6   KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL----------NRTTLNHH 233
              L H NI+G + +               H  +   ++D +          N   L   
Sbjct: 66  LQELSHPNIIGLLDA-------------FGHKSNISLVFDFMETDLEVIIKDNSLVLTPS 112
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
            +    L  + GL +LH           I HRD+K  N+L+  NG   +ADFGLA S+  
Sbjct: 113 HIKAYMLMTLQGLEYLHQHW--------ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
Query: 294 LSNKMDIPPNP----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                   PN     +V T+ Y +PE+L              A +Y +G+ +W V
Sbjct: 165 --------PNRAYXHQVVTRWYRAPELL------------FGARMYGVGVDMWAV 199

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 100 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 154
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 155 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 200
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 201 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 227

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 95  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 91  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 50  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 49  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 108 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 163
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 164 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 209 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 235

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 133 TLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
           ++  +  L E +GKG +  V R   +  G+  A KI       +RD     RE  I    
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
           LL+H NI+     D  S       +LV    + G L+ D + R   +          I+ 
Sbjct: 59  LLKHPNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
            + H H           I HRD+K +N+L+  K+ G  V +ADFGLA+            
Sbjct: 115 SVNHCHLN--------GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
                GT  Y+SPE+L +    D +   K  D++A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRK----DPYG--KPVDMWACGVILY 197

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 112 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 167
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 168 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 212
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 213 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 239

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           E IG+G YG V++    +GE  A+K      +    +E E   +  +R  +IL  +    
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
              ++  +L+ V H      L ++HL++   +  +++ +C             L ++NG+
Sbjct: 58  -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H           + HRD+K +N+L+   G   IADFGLA ++     K        +
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEI 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
            T  Y +P++L     M   +     DI+++G +  E+   T
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMVNGT 198

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 95  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVK-IFFSRDEASWSRET--EIYSTVLLR 188
           +  +  + E IG G YG V   R    G+ VA+K I  + D  + ++ T  E+      +
Sbjct: 53  VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 112
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK----------- 237
           H+NI+     D+        L     Y  F S+Y  L+    + HQ++            
Sbjct: 113 HDNIIAI--KDI--------LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 238 -ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
                ++ GL ++H+          + HRD+K  N+LV  N    I DFG+A        
Sbjct: 163 YFLYQLLRGLKYMHSA--------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
           +        V T+ Y +PE++     +   E  +  D++++G +  E+  R +
Sbjct: 215 EHQYFMTEYVATRWYRAPELM-----LSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 112 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 166
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 167 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGYVATRWYR 212
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 213 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 239

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + IG G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   +ADFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           E IG+G YG V++    +GE  A+K      +    +E E   +  +R  +IL  +    
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
              ++  +L+ V H      L ++HL++   +  +++ +C             L ++NG+
Sbjct: 58  -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H           + HRD+K +N+L+   G   IADFGLA ++     K        V
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEV 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
            T  Y +P++L     M   +     DI+++G +  E+ 
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMV 195

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + IG G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   +ADFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 40/225 (17%)
Query: 142 ECIGKGRYGEV--WRGVWHGENVAVK-IFFSRDEASWSRET--EIYSTVLLRHENILGYI 196
           E IG G YG V   R    G+ VA+K I  + D  + ++ T  E+      +H+NI+   
Sbjct: 60  ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI- 118
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------------ICLSIVN 244
             D+        L     Y  F S+Y  L+    + HQ++                 ++ 
Sbjct: 119 -KDI--------LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL ++H+          + HRD+K  N+LV  N    I DFG+A        +       
Sbjct: 170 GLKYMHSA--------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
            V T+ Y +PE++     +   E  +  D++++G +  E+  R +
Sbjct: 222 YVATRWYRAPELM-----LSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 129/330 (39%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
           K + L + +G+G +G+V        +G      VAVK+       S  R+  +E      
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
           + H +++   G+       C+Q   L L+  Y  +GSL                      
Sbjct: 83  VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
               DH +   L    ++     I  G+ +L         + ++ HRD+ ++NILV    
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMSLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
              I+DFGL+    +  + +      R+  K +M+ E L + I         ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE+      N        PY   +P +  F+ ++       +RP        D+   
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
            M ++M +CW Q  + R     + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
           TLA  +I   + IGKG +G V +G  V     VA+K     D    +         + E+
Sbjct: 15  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
           +    L H NI+   G             +V  +   G LY  L      +     +++ 
Sbjct: 75  FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
           L I  G+ ++  +       P I HRD++S NI +++       C  +ADFG +      
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
            + +       +G  ++M+P    E+I  +     +KAD Y+  ++L+ +       G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
           +EY            S+  ++ +  I ++  RP +P     +     +  V++ CW  + 
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
             R     + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + IG G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   +ADFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L+L+  +   G L+  L++  +   + +K  L+ +   L HLH+          I +RD
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 151
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +NIL+   G   + DFGL    S+ S   +       GT  YM+PE+++   +    
Sbjct: 152 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 206
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
                AD ++ G++++E+   T
Sbjct: 207 -----ADWWSFGVLMFEMLTGT 223

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L+L+  +   G L+  L++  +   + +K  L+ +   L HLH+          I +RD
Sbjct: 101 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 152
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +NIL+   G   + DFGL    S+ S   +       GT  YM+PE+++   +    
Sbjct: 153 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 207
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
                AD ++ G++++E+   T
Sbjct: 208 -----ADWWSFGVLMFEMLTGT 224

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L+L+  +   G L+  L++  +   + +K  L+ +   L HLH+          I +RD
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 151
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
           +K +NIL+   G   + DFGL    S+ S   +       GT  YM+PE+++   +    
Sbjct: 152 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 206
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
                AD ++ G++++E+   T
Sbjct: 207 -----ADWWSFGVLMFEMLTGT 223

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
           H+ +      + +     I  GL  LH E         I +RD+K +NIL+  +G   I+
Sbjct: 277 HMGQAGFPEARAVFYAAEICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRIS 328
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLW 342
           D GLAV   +           RVGT  YM+PE++ +E             D +ALG +L+
Sbjct: 329 DLGLAVHVPEGQTIKG-----RVGTVGYMAPEVVKNERYTFS-------PDWWALGCLLY 376
Query: 343 EV 344
           E+
Sbjct: 377 EM 378

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 52/284 (18%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF----FSRDEASWSRETEIYSTVLLRHENILGYIG 197
           +GKG +G+V   R    G+  AVK+       +D+      TE     L R+   L  + 
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL- 89
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGT 256
                  +  +L+ V  + + G L  H+ ++   +  +       I++ L+ LH +    
Sbjct: 90  --FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---- 143
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I +RD+K  N+L+   G C +ADFG+      + N   +      GT  Y++PEI
Sbjct: 144 ----GIIYRDLKLDNVLLDHEGHCKLADFGMC--KEGICNG--VTTATFCGTPDYIAPEI 195
Query: 317 LDESINMDCFESFKKADIYALGLVLWE-VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           L E +           D +A+G++L+E +C             AP+        + DD+ 
Sbjct: 196 LQEMLYG------PAVDWWAMGVLLYEMLCGH-----------APFE-----AENEDDLF 233
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           + I  D+   V+   W+ +      T ++K    +N  +RL +L
Sbjct: 234 EAILNDE---VVYPTWLHEDA----TGILKSFMTKNPTMRLGSL 270

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I D+GLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
           TLA  +I   + IGKG +G V +G  V     VA+K     D    +         + E+
Sbjct: 15  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
           +    L H NI+   G             +V  +   G LY  L      +     +++ 
Sbjct: 75  FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
           L I  G+ ++  +       P I HRD++S NI +++       C  +ADF L+      
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
            + +       +G  ++M+P    E+I  +     +KAD Y+  ++L+ +       G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
           +EY            S+  ++ +  I ++  RP +P     +     +  V++ CW  + 
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
             R     + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN 322
            HRDIK  N+L+  NG   +ADFG   S  ++++   +  +  VGT  Y+SPEIL +++ 
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPEIL-QAME 252
Query: 323 MDCFESFKKADIYALGLVLWEV 344
               +   + D ++LG+ ++E+
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEM 274

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 139 SLSECIGKGRYGEVWRGV-------WHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
            L E +GKG +  V R V       +  + +  K   +RD     RE  I    LL+H N
Sbjct: 34  QLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICR--LLKHPN 91
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           I+     D  S       +LV    + G L+ D + R   +          I+  + H+H
Sbjct: 92  IVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG 307
                      I HRD+K +N+L+  K  G  V +ADFGLA+                 G
Sbjct: 148 QH--------DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW----FGFAG 195
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           T  Y+SPE+L +          K  DI+A G++L+
Sbjct: 196 TPGYLSPEVLRKD------PYGKPVDIWACGVILY 224

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   S+   S       Y  + L    +HEN++G + 
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA          D      V T+ Y 
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  EI  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+++   G   + DFGLA      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           HRDIK  N+L+  NG   +ADFG   S  ++++   +  +  VGT  Y+SPEIL +++  
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPEIL-QAMED 269
Query: 324 DCFESFKKADIYALGLVLWEV 344
              +   + D ++LG+ ++E+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEM 290

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
           +L+L+  +   G L+  L++  +   + +K  L+ +  GL HLH+          I +RD
Sbjct: 104 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS--------LGIIYRD 155
Query: 267 IKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
           +K +NIL+   G   + DFGL   A+ + + +           GT  YM+PE+++   + 
Sbjct: 156 LKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-------CGTVEYMAPEVVNRQGHS 208
Query: 324 DCFESFKKADIYALGLVLWEVC 345
                   AD ++ G++++E+ 
Sbjct: 209 HS------ADWWSYGVLMFEML 224

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  EI  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+++   G   + DFGLA      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y   G ++ HL R    +          IV    +LH+          + +R
Sbjct: 115 SNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   +ADFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 218 -----KAVDWWALGVLIYEMA 233

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
           H+ +      + +     I  GL  LH E         I +RD+K +NIL+  +G   I+
Sbjct: 277 HMGQAGFPEARAVFYAAEICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRIS 328
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLW 342
           D GLAV   +           RVGT  YM+PE++ +E             D +ALG +L+
Sbjct: 329 DLGLAVHVPEGQTIKG-----RVGTVGYMAPEVVKNERYTFS-------PDWWALGCLLY 376
Query: 343 EV 344
           E+
Sbjct: 377 EM 378

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           A+   + + IG+G +GEV + V H    + K++  +  + +       S       +I+ 
Sbjct: 74  AEDYDVVKVIGRGAFGEV-QLVRH--KASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 195 YIGSDMTSRNSCT-----QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           +  S    +  C       L++V  Y   G L + ++   +           +V  L  +
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + HRD+K  N+L+  +G   +ADFG  +   +      +  +  VGT 
Sbjct: 191 HSM--------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---VHCDTAVGTP 239
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            Y+SPE+L +S   D +   ++ D +++G+ L+E+
Sbjct: 240 DYISPEVL-KSQGGDGYYG-RECDWWSVGVFLFEM 272

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           + +LV      GS+  H++ R   N  +   +   + + L  LH +         IAHRD
Sbjct: 85  RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--------GIAHRD 136
Query: 267 IKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEILDE 319
           +K +NIL +         I DFGL  S  +L+        P +    G+  YM+PE++ E
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLG-SGIKLNGDCSPISTPELLTPCGSAEYMAPEVV-E 194
Query: 320 SINMDCFESFKKADIYALGLVLW 342
           + + +     K+ D+++LG++L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILY 217

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
           K + L + +G+G +G+V        +G      VAVK+       S  R+  +E      
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
           + H +++   G+       C+Q   L L+  Y  +GSL                      
Sbjct: 83  VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
               DH +   L    ++     I  G+ +L         +  + HRD+ ++NILV    
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMKLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
              I+DFGL+    +  + +      R+  K +M+ E L + I         ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE+      N        PY   +P +  F+ ++       +RP        D+   
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
            M ++M +CW Q  + R     + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 68/339 (20%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL-------- 186
           + Q    E +G G Y  V++G+    N    ++ +  E     E    ST +        
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGL----NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICL----- 240
           L+HENI+       T      +L LV  +     L  +++ RT  N  + +++ L     
Sbjct: 60  LKHENIVRLYDVIHTE----NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             ++ GL   H           I HRD+K +N+L+   G   + DFGLA ++        
Sbjct: 115 WQLLQGLAFCHEN--------KILHRDLKPQNLLINKRGQLKLGDFGLARAFG------- 159
Query: 300 IPPN---PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR---------- 346
           IP N     V T  Y +P++L     M         DI++ G +L E+            
Sbjct: 160 IPVNTFSSEVVTLWYRAPDVL-----MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWV-SDSTLNAMTKVMK 405
             +   IF+    P   L    PS   + K     QQRP    R V    T   +   + 
Sbjct: 215 EEQLKLIFDIMGTPNESLW---PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLM 271
Query: 406 ECWHQ----NANVRLSALRVKKTLIKLACADMYIHCSDG 440
           +  H     N ++RLSA   K+ L     A+ Y H S G
Sbjct: 272 DFLHGLLQLNPDMRLSA---KQALHHPWFAEYYHHASMG 307

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
           + E IG G Y E  R V    N+  AVK+   + +   S E EI    LLR   H NI+ 
Sbjct: 31  VKETIGVGSYSECKRCVHKATNMEYAVKVI-DKSKRDPSEEIEI----LLRYGQHPNII- 84
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV-HLHTEI 253
              +     +    ++LVT     G L D + R      +     L  +   V +LH++ 
Sbjct: 85  ---TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 254 FGTQGKPAIAHRDIKSKNILV---KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                   + HRD+K  NIL      N  C+ I DFG A    QL  +  +   P   T 
Sbjct: 141 -------GVVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTP-CYTA 189
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
            +++PE+L  +  +  C       DI++LG++L+
Sbjct: 190 NFVAPEVLKRQGYDEGC-------DIWSLGILLY 216

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           IG+G YG V+  R    G+ VA+K F   ++    ++    EI     L+H N++  +  
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTEIF 254
               R    +L LV  Y  H+     D   R    H    +    L  VN   H H  I 
Sbjct: 71  FRRKR----RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN-FCHKHNCI- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRD+K +NIL+  +    + DFG A   +  S+  D      V T+ Y SP
Sbjct: 125 ---------HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD----DEVATRWYRSP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
           E+L               D++A+G V  E+
Sbjct: 172 ELLVGDTQYG-----PPVDVWAIGCVFAEL 196

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
           + E IG G Y E  R V    N+  AVK+   + +   S E EI    LLR   H NI+ 
Sbjct: 31  VKETIGVGSYSECKRCVHKATNMEYAVKVI-DKSKRDPSEEIEI----LLRYGQHPNII- 84
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV-HLHTEI 253
              +     +    ++LVT     G L D + R      +     L  +   V +LH++ 
Sbjct: 85  ---TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 254 FGTQGKPAIAHRDIKSKNILV---KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                   + HRD+K  NIL      N  C+ I DFG A    QL  +  +   P   T 
Sbjct: 141 -------GVVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTP-CYTA 189
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
            +++PE+L  +  +  C       DI++LG++L+
Sbjct: 190 NFVAPEVLKRQGYDEGC-------DIWSLGILLY 216

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
           +GKG +G+V      G  E  AVKI   +D      + E      +  + +L   G    
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKIL-KKDVVIQDDDVE----CTMVEKRVLALPGKPPF 82
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
           +T  +SC Q    L+ V  Y + G L  H+ +         +     I  GL  L ++  
Sbjct: 83  LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-- 140
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS--YSQLSNKMDIPPNPRVGTKRYM 312
                  I +RD+K  N+++ + G   IADFG+     +  ++ K         GT  Y+
Sbjct: 141 ------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX------FCGTPDYI 188
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +PEI+        ++ + K+ D +A G++L+E+
Sbjct: 189 APEII-------AYQPYGKSVDWWAFGVLLYEM 214

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
           K + L + +G+G +G+V        +G      VAVK+       S  R+  +E      
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
           + H +++   G+       C+Q   L L+  Y  +GSL                      
Sbjct: 83  VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
               DH +   L    ++     I  G+ +L         +  + HRD+ ++NILV    
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMKLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
              I+DFGL+    +  + +      R+  K +M+ E L + I         ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSYVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
           ++LWE+      N        PY   +P +  F+ ++       +RP        D+   
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
            M ++M +CW Q  + R     + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------AGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD----HLNRTTLNHH 233
           + E++ + L  H NI+ Y  + +       +LW+VT + ++GS  D    H     +N  
Sbjct: 58  QGELHVSKLFNHPNIVPYRATFIADN----ELWVVTSFMAYGSAKDLICTHF-MDGMNEL 112
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-----A 288
            +  I   ++  L ++H   +         HR +K+ +IL+  +G   ++  GL      
Sbjct: 113 AIAYILQGVLKALDYIHHMGY--------VHRSVKASHILISVDGKVYLS--GLRSNLSM 162
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           +S+ Q    +   P   V    ++SPE+L +  N+  +++  K+DIY++G+   E+    
Sbjct: 163 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ--NLQGYDA--KSDIYSVGITACEL---- 214
Query: 349 KANGIFEEYKAPYHDL 364
            ANG       P+ D+
Sbjct: 215 -ANG-----HVPFKDM 224

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD----HLNRTTLNHH 233
           + E++ + L  H NI+ Y  + +       +LW+VT + ++GS  D    H     +N  
Sbjct: 74  QGELHVSKLFNHPNIVPYRATFIADN----ELWVVTSFMAYGSAKDLICTHF-MDGMNEL 128
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-----A 288
            +  I   ++  L ++H   +         HR +K+ +IL+  +G   ++  GL      
Sbjct: 129 AIAYILQGVLKALDYIHHMGY--------VHRSVKASHILISVDGKVYLS--GLRSNLSM 178
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           +S+ Q    +   P   V    ++SPE+L +  N+  +++  K+DIY++G+   E+    
Sbjct: 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ--NLQGYDA--KSDIYSVGITACEL---- 230
Query: 349 KANGIFEEYKAPYHDL 364
            ANG       P+ D+
Sbjct: 231 -ANG-----HVPFKDM 240

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 28/223 (12%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           R   +   + + IG+G +GEV   V   +N A K+F  +    W       +       +
Sbjct: 70  RLHREDFEILKVIGRGAFGEV--AVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 192 IL-----GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-HHQMMKICLS---- 241
           +L      +I +   +      L+LV  Y+  G L   L++       +M +  L+    
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
            ++ +  LH             HRDIK  NIL+  NG   +ADFG   S  +L     + 
Sbjct: 187 AIDSVHQLH-----------YVHRDIKPDNILMDMNGHIRLADFG---SCLKLMEDGTVQ 232
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
            +  VGT  Y+SPEIL +++         + D ++LG+ ++E+
Sbjct: 233 SSVAVGTPDYISPEIL-QAMEGGKGRYGPECDWWSLGVCMYEM 274

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------XGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V   +    GE VA+K   SR   S       Y  +LL    +HEN++G + 
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +  +S  +    +LV  +    +    +     +  ++  +   ++ GL ++H+    
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQ--TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA--- 163
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 164 -----GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGYVVTRWYRAPE 211
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
           ++   ++ +     +  DI+++G ++ E+ 
Sbjct: 212 VILSWMHYN-----QTVDIWSVGCIMAEML 236

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DF LA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V   +    GE VA+K   SR   S       Y  +LL    +HEN++G + 
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             +  +S  +    +LV  +    +    +     +  ++  +   ++ GL ++H+    
Sbjct: 91  VFTPASSLRNFYDFYLVMPF--MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 146 -----GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGYVVTRWYRAPE 193
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
           ++   ++ +     +  DI+++G ++ E+ 
Sbjct: 194 VILSWMHYN-----QTVDIWSVGCIMAEML 218

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 50/227 (22%)
Query: 138 ISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTVLLR 188
           I +   IG G +GEV  G   +    +VAV I      +  +    +  E  I       
Sbjct: 45  IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ--FD 102
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGL 246
           H N++   G  + +R     + +V  +   G+L   L +        Q++ +   I  G+
Sbjct: 103 HPNVVHLEG--VVTRGK--PVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNKM 298
            +L              HRD+ ++NILV +N  C ++DFGL+          Y+    K+
Sbjct: 159 RYL--------ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
            +         R+ +PE +        +  F  A D+++ G+V+WEV
Sbjct: 211 PV---------RWTAPEAIQ-------YRKFTSASDVWSYGIVMWEV 241

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+       I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 264
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D    +       ++D+++ G++LWE         IF    +PY   V +D  F   R
Sbjct: 265 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 305
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           ++    + R         D T   M + M +CWH   + R
Sbjct: 306 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 338

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+       I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D    +       ++D+++ G++LWE         IF    +PY   V +D  F   R
Sbjct: 267 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 307
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           ++    + R         D T   M + M +CWH   + R
Sbjct: 308 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 340

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I  FGLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 96  SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 147
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 200
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 201 GYN-------KAVDWWALGVLIYEMA 219

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
           +GKG +G+V      G  E  AVKI   +D      + E      +  + +L   G    
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKIL-KKDVVIQDDDVE----CTMVEKRVLALPGKPPF 403
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
           +T  +SC Q    L+ V  Y + G L  H+ +         +     I  GL  L ++  
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-- 461
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS--YSQLSNKMDIPPNPRVGTKRYM 312
                  I +RD+K  N+++ + G   IADFG+     +  ++ K         GT  Y+
Sbjct: 462 ------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX------FCGTPDYI 509
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
           +PEI+        ++ + K+ D +A G++L+E+
Sbjct: 510 APEII-------AYQPYGKSVDWWAFGVLLYEM 535

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 234 QMMK-ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           Q++K I  S++N   ++H E         I HRD+K  NIL+  NG   ++DFG      
Sbjct: 151 QVIKCIIKSVLNSFSYIHNE-------KNICHRDVKPSNILMDKNGRVKLSDFG------ 197
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           +    +D       GT  +M PE      + +      K DI++LG+ L+
Sbjct: 198 ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG----AKVDIWSLGICLY 243

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+       I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 273
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D    +       ++D+++ G++LWE         IF    +PY   V +D  F   R
Sbjct: 274 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 314
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           ++    + R         D T   M + M +CWH   + R
Sbjct: 315 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 347

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y + G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 238 -----KAVDWWALGVLIYEMA 253

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 217 -----KAVDWWALGVLIYEMA 232

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 115 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 218 -----KAVDWWALGVLIYEMA 233

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
           HRD+ ++NIL+       I DFGLA          DI  +P   R G  R    +M+PE 
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 271
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           I D    +       ++D+++ G++LWE         IF    +PY   V +D  F   R
Sbjct: 272 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 312
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           ++    + R         D T   M + M +CWH   + R
Sbjct: 313 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 345

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 217 -----KAVDWWALGVLIYEMA 232

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           +N H +      ++ GL + H        +  + HRD+K +N+L+   G   +ADFGLA 
Sbjct: 97  INMHNVKLFLFQLLRGLAYCH--------RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           + S  +   D      V T  Y  P+IL  S +        + D++ +G + +E+ 
Sbjct: 149 AKSIPTKTYD----NEVVTLWYRPPDILLGSTDYST-----QIDMWGVGCIFYEMA 195

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R         +     IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I D GLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R         +     IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R         +     IV    +LH+         
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 155
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 208
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 209 GYN-------KAVDWWALGVLIYEMA 227

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R         +     IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 217 -----KAVDWWALGVLIYEMA 232

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVK-----IFFSRDEASWSRETEIYSTVLLR 188
           +   L + +GKG +G+V+   +   N   A+K     +    D+   +   +   ++   
Sbjct: 18  EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLV 247
           H  +     +  T  N    L+ V  Y + G L  H+      +  +       I+ GL 
Sbjct: 78  HPFLTHMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            LH++         I +RD+K  NIL+  +G   IADFG+    + L    D   N   G
Sbjct: 134 FLHSK--------GIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLG---DAKTNEFCG 181
Query: 308 TKRYMSPEI-LDESINMDCFESFKKADIYALGLVLWEV 344
           T  Y++PEI L +  N          D ++ G++L+E+
Sbjct: 182 TPDYIAPEILLGQKYN-------HSVDWWSFGVLLYEM 212

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 28  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 84
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 85  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 143
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 144 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-------CGTP 188
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 189 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 218

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y + G ++ HL R         +     IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R         +     IV    +LH+          + +R
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 238 -----KAVDWWALGVLIYEMA 253

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I D GLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           R  A+   + + IG+G +GEV + V H      K++  +  + +       S       +
Sbjct: 65  RMKAEDYEVVKVIGRGAFGEV-QLVRHKS--TRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           I+ +  S        +      L++V  Y   G L + ++   +           +V  L
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H+  F         HRD+K  N+L+  +G   +ADFG  +   +++ +  +  +  V
Sbjct: 182 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 230
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT  Y+SPE+L +S   D +   ++ D +++G+ L+E+
Sbjct: 231 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 266

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           R  A+   + + IG+G +GEV + V H      K++  +  + +       S       +
Sbjct: 70  RMKAEDYEVVKVIGRGAFGEV-QLVRH--KSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           I+ +  S        +      L++V  Y   G L + ++   +           +V  L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H+  F         HRD+K  N+L+  +G   +ADFG  +   +++ +  +  +  V
Sbjct: 187 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 235
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT  Y+SPE+L +S   D +   ++ D +++G+ L+E+
Sbjct: 236 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 271

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
           S E EI     ++H NI+     D+    S   L+L+    S G L+D +  +       
Sbjct: 62  SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
             ++   +++ + +LH           I HRD+K +N+L   +  +   +I+DFGL+   
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
                KM+ P    +   GT  Y++PE+L +   S  +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 31/241 (12%)
Query: 133 TLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
           ++     + + IG G +GE+  G  ++  E VA+K+   +  A        +   L   E
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 191 NI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
            +  + Y G     + +   L L+    S   L+D  +RT      ++ I + ++  + +
Sbjct: 61  GVPQVYYFGP--XGKYNAMVLELLGP--SLEDLFDLCDRT-FTLKTVLMIAIQLITRMEY 115
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIADFGLAVSYSQLSNKMDIPPN 303
           +HT+        ++ +RD+K +N LV   GT       I DFGLA  Y     K  IP  
Sbjct: 116 VHTK--------SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYR 167
Query: 304 PR---VGTKRYMS--PEILDESINMDCFESFKKADIYAL-GLVLWEVCRRTKANGIFEEY 357
                 GT RYMS    +  E    D  E+     +Y L G + W+     KA+ + E Y
Sbjct: 168 EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL---KADTLKERY 224
Query: 358 K 358
           +
Sbjct: 225 Q 225

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
           S E EI     ++H NI+     D+    S   L+L+    S G L+D +  +       
Sbjct: 62  SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
             ++   +++ + +LH           I HRD+K +N+L   +  +   +I+DFGL+   
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
                KM+ P    +   GT  Y++PE+L +   S  +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 134 LAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTVL 186
             ++  L E +GKG +  V R   V  G+  A  I       +RD     RE  I    L
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR--L 66
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNG 245
           L+H NI+     D  S       +L+    + G L+ D + R   +          I+  
Sbjct: 67  LKHPNIVRL--HDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPP 302
           ++H H        +  + HR++K +N+L+  K  G  V +ADFGLA+             
Sbjct: 123 VLHCH--------QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW---- 170
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
               GT  Y+SPE+L +    D +   K  D++A G++L+
Sbjct: 171 FGFAGTPGYLSPEVLRK----DPYG--KPVDLWACGVILY 204

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
           +G G YG V        G  VAVK   SR   S       Y  + L    +HEN++G + 
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
               +R+      ++LVTH    G+  +++    + T +H Q +     I+ GL ++H+ 
Sbjct: 89  VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I D GLA          D      V T+ Y 
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
           +PEI+     ++     +  DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 140 LSECIGKGRYGEVWRGVWHGEN--VAVK-----IFFSRDEASWSRETEIYSTVLLRHENI 192
           L + +GKG +G+V+   +   N   A+K     +    D+   +   +   ++   H  +
Sbjct: 21  LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHT 251
                +  T  N    L+ V  Y + G L  H+      +  +       I+ GL  LH+
Sbjct: 81  THMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         I +RD+K  NIL+  +G   IADFG+    + L    D   N   GT  Y
Sbjct: 137 K--------GIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLG---DAKTNXFCGTPDY 184
Query: 312 MSPEI-LDESINMDCFESFKKADIYALGLVLWEV 344
           ++PEI L +  N          D ++ G++L+E+
Sbjct: 185 IAPEILLGQKYN-------HSVDWWSFGVLLYEM 211

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
           R  A+   + + IG+G +GEV + V H      K++  +  + +       S       +
Sbjct: 70  RMKAEDYEVVKVIGRGAFGEV-QLVRHKS--TRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
           I+ +  S        +      L++V  Y   G L + ++   +           +V  L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H+  F         HRD+K  N+L+  +G   +ADFG  +   +++ +  +  +  V
Sbjct: 187 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 235
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           GT  Y+SPE+L +S   D +   ++ D +++G+ L+E+
Sbjct: 236 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 271

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
           S E EI     ++H NI+     D+    S   L+L+    S G L+D +  +       
Sbjct: 62  SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
             ++   +++ + +LH           I HRD+K +N+L   +  +   +I+DFGL+   
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
                KM+ P    +   GT  Y++PE+L +   S  +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+++   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y   G ++ HL R    +          IV    +LH+          + +R
Sbjct: 135 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 238 -----KAVDWWALGVLIYEMA 253

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R         +     IV    +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
           S E EI     ++H NI+     D+    S   L+L+    S G L+D +  +       
Sbjct: 62  SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
             ++   +++ + +LH           I HRD+K +N+L   +  +   +I+DFGL+   
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
                KM+ P    +   GT  Y++PE+L +   S  +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R    +          IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+++   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR-------ETEIYSTVL 186
           +   +   +GKG +  V+R   +  G  VA+K+    D+ +  +       + E+     
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTT-LNHHQMMKICLSIVN 244
           L+H +IL        S      ++LV      G +  +L NR    + ++       I+ 
Sbjct: 68  LKHPSILELYNYFEDS----NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT 123
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+++LH+          I HRD+   N+L+  N    IADFGLA        ++ +P   
Sbjct: 124 GMLYLHSH--------GILHRDLTLSNLLLTRNMNIKIADFGLAT-------QLKMPHEK 168
Query: 305 RV---GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                GT  Y+SPEI   S +    ES    D+++LG + + +
Sbjct: 169 HYTLCGTPNYISPEIATRSAH--GLES----DVWSLGCMFYTL 205

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y   G ++ HL R    +          IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 217 -----KAVDWWALGVLIYEMA 232

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R         +     IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R    +          IV    +LH+         
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 153
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 206
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 207 GYN-------KAVDWWALGVLIYEMA 225

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R         +     IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+L+   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T  L  + IL 
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVH 248
            +     ++        + L++V  Y   G ++ HL R    +          IV    +
Sbjct: 98  AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH+          + +RD+K +N+++   G   + DFG A      +  +        GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
             Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T+    +L+  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
           N    +  + + +++ + L++V  Y   G ++ HL R         +     IV    +L
Sbjct: 99  NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + +RD+K +N+++   G   + DFG A      +  +        GT 
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
            Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y   G ++ HL R    +          IV    +LH+          + +R
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+++   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++E+ 
Sbjct: 218 -----KAVDWWALGVLIYEMA 233

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T  L  + IL 
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVH 248
            +     ++        + L++V  Y   G ++ HL R    +          IV    +
Sbjct: 98  AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH+          + +RD+K +N+++   G   + DFG A      +  +        GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
             Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
           S    + L++V  Y   G ++ HL R         +     IV    +LH+         
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 153
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
            + +RD+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 206
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
             N       K  D +ALG++++E+ 
Sbjct: 207 GYN-------KAVDWWALGVLIYEMA 225

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN---ILGYIGS 198
           +G G  G+VW+  +   G  +AVK          ++   +   V+L+  +   I+   G+
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
            +T+ +    + L+      G+  + L +     +    + K+ ++IV  L +L      
Sbjct: 93  FITNTDVFIAMELM------GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---- 142
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
              K  + HRD+K  NIL+   G   + DFG++    +L +  D   +   G   YM+PE
Sbjct: 143 ---KHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVD--DKAKDRSAGCAAYMAPE 194
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
            +D            +AD+++LG+ L E+     A G F     PY +       F+ + 
Sbjct: 195 RIDPPDPTKPDYDI-RADVWSLGISLVEL-----ATGQF-----PYKNC---KTDFEVLT 240
Query: 376 KVICIDQQRPVLPN 389
           KV  + ++ P+LP 
Sbjct: 241 KV--LQEEPPLLPG 252

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           Q    + +G G +G V   + +  G + A+KI    D+    +  +I  T  L  + IL 
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVH 248
            +     ++        + L++V  Y   G ++ HL R         +     IV    +
Sbjct: 98  AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH+          + +RD+K +N+++   G   + DFG A      +  +        GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
             Y++PE IL +  N       K  D +ALG++++E+ 
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
           + E +GKG +  V R V    G   A KI       +RD     RE  I     L+H NI
Sbjct: 10  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
           +     D     S    +LV    + G L++ +             C+  I+  + + H+
Sbjct: 68  VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
                     I HR++K +N+L+  K  G  V +ADFGLA+  +              GT
Sbjct: 124 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             Y+SPE+L +    D +   K  DI+A G++L+
Sbjct: 171 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 198

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
           + E +GKG +  V R V    G   A KI       +RD     RE  I     L+H NI
Sbjct: 9   VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 66
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
           +     D     S    +LV    + G L++ +             C+  I+  + + H+
Sbjct: 67  VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
                     I HR++K +N+L+  K  G  V +ADFGLA+  +              GT
Sbjct: 123 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             Y+SPE+L +    D +   K  DI+A G++L+
Sbjct: 170 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 197

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK---TNGTCVIADFGLAVS 290
           ++MK    ++N L + H++         + H+D+K +NIL +    +    I DFGLA  
Sbjct: 128 ELMK---QMMNALAYFHSQ--------HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
           +     K D       GT  YM+PE+    +   C       DI++ G+V++
Sbjct: 177 F-----KSDEHSTNAAGTALYMAPEVFKRDVTFKC-------DIWSAGVVMY 216

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 204 NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK-----ICLSIVNGLVHLHTEIFGTQG 258
               Q++++  Y   G L+  L ++    + + K     +CL+    L +LH++      
Sbjct: 76  QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSK------ 125
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
              I +RD+K +NIL+  NG   I DFG A     ++  +        GT  Y++PE++ 
Sbjct: 126 --DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-------CGTPDYIAPEVVS 176
Query: 319 ESINMDCFESFKKADIYALGLVLWEVC 345
                      K  D ++ G++++E+ 
Sbjct: 177 TK------PYNKSIDWWSFGILIYEML 197

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
           D+K +N+L+   G   + DFG A      +  +        GT  Y++PE IL +  N  
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
                K  D +ALG++++++ 
Sbjct: 217 -----KAVDWWALGVLIYQMA 232

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
           + E +GKG +  V R V    G   A KI       +RD     RE  I     L+H NI
Sbjct: 10  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
           +     D     S    +LV    + G L++ +             C+  I+  + + H+
Sbjct: 68  VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
                     I HR++K +N+L+  K  G  V +ADFGLA+  +              GT
Sbjct: 124 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             Y+SPE+L +    D +   K  DI+A G++L+
Sbjct: 171 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 198

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           + +LV      GS+  H++ R   N  +   +   + + L  LH +         IAHRD
Sbjct: 85  RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--------GIAHRD 136
Query: 267 IKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEILDE 319
           +K +NIL +         I DF L  S  +L+        P +    G+  YM+PE++ E
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLG-SGIKLNGDCSPISTPELLTPCGSAEYMAPEVV-E 194
Query: 320 SINMDCFESFKKADIYALGLVLW 342
           + + +     K+ D+++LG++L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILY 217

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
           E IG+G YG V++       E VA+K     D+      + +    LL+   H+NI+   
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL- 66
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                  +S  +L LV  +        +D  N   L+   +      ++ GL   H+   
Sbjct: 67  ---HDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
                  + HRD+K +N+L+  NG   +ADFGLA ++ 
Sbjct: 121 ------NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
           + E +GKG +  V R V    G   A KI       +RD     RE  I     L+H NI
Sbjct: 33  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 90
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
           +     D     S    +LV    + G L++ +             C+  I+  + + H+
Sbjct: 91  VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
                     I HR++K +N+L+  K  G  V +ADFGLA+  +              GT
Sbjct: 147 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 193
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             Y+SPE+L +    D +   K  DI+A G++L+
Sbjct: 194 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 221

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVLLR-- 188
           +Q +L   +GKG +G V       E+     VAVK+  +   AS   E  +     ++  
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 189 -HENILGYIGSDMTSR--NSCTQLWLVTHYHSFGSLYDHL-------NRTTLNHHQMMKI 238
            H ++   +G  + SR         ++  +   G L+  L       N   L    +++ 
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
            + I  G+ +L +  F         HRD+ ++N ++  + T  +ADFGL       S K+
Sbjct: 143 MVDIACGMEYLSSRNF--------IHRDLAARNCMLAEDMTVCVADFGL-------SRKI 187
Query: 299 DIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVLWEVCRRTK 349
                 R G    +  + L  ES+  + +     +D++A G+ +WE+  R +
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQ 237

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
           + L++V  Y + G ++ HL R    +          IV    +LH+          + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
           D+K +N+++   G   + DFG A      +  +        GT  Y++PEI+        
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEII-------I 211
Query: 326 FESFKKA-DIYALGLVLWEVC 345
            + + KA D +ALG++++E+ 
Sbjct: 212 SKGYNKAVDWWALGVLIYEMA 232

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	443
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-174
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-173
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-167
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-163
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-153
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-140
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-59
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-57
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-55
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-53
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-53
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-53
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-52
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-51
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-46
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-38
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-37
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-35
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-34
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-33
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-33
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-32
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-32
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-32
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-31
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-31
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-30
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-30
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-30
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-29
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-29
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-29
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-29
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-28
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-28
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-28
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-28
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-28
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-28
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-28
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-28
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-27
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-27
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-27
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-27
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-27
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-27
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-26
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-26
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-26
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-26
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-26
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-26
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-26
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-26
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-26
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-26
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-25
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-25
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-25
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-25
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-25
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-25
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-25
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-25
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	9e-25
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-24
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-24
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-24
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-24
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-23
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-23
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-23
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-22
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-22
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-22
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-22
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-22
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-22
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-22
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-22
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-21
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-21
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-21
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-21
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-21
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-21
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-21
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-21
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-20
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-20
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-20
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-20
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-20
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	9e-20
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-19
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-19
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-19
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-19
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-19
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-19
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-19
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-19
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-19
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-18
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-18
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	4e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-18
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-18
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-18
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-18
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-17
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-17
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-17
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-17
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	9e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-15
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-15
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-15
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-15
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-14
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-14
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-13
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-13
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-13
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-13
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	6e-13
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	7e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-13
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-12
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-12
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-12
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-12
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	9e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-11
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-11
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	8e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	9e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-10
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-10
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-10
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-10
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-10
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-10
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-10
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-10
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-09
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-09
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	7e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	9e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	6e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-05
2h62_C	129	Bone morphogenetic protein receptor type IA; TGF-b	7e-05

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  491 bits (1265), Expect = e-174
 Identities = 203/322 (63%), Positives = 251/322 (77%)

Query: 108 STLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIF 167
            +LR+ ++ S +SGSGSGLPLL+QRT+AKQI + + IGKGRYGEVW G W GE VAVK+F
Sbjct: 9   ESLRDLIEQSQSSGSGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVF 68

Query: 168 FSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR 227
           F+ +EASW RETEIY TVL+RHENILG+I +D+    S TQL+L+T YH  GSLYD+L  
Sbjct: 69  FTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS 128

Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
           TTL+   M+K+  S V+GL HLHTEIF TQGKPAIAHRD+KSKNILVK NGTC IAD GL
Sbjct: 129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188

Query: 288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           AV +   +N++DIPPN RVGTKRYM PE+LDES+N + F+S+  AD+Y+ GL+LWEV RR
Sbjct: 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248

Query: 348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKEC 407
             + GI EEY+ PYHDLVP DPS++DMR+++CI + RP  PNRW SD  L  M K+M EC
Sbjct: 249 CVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC 308

Query: 408 WHQNANVRLSALRVKKTLIKLA 429
           W  N   RL+ALRVKKTL K++
Sbjct: 309 WAHNPASRLTALRVKKTLAKMS 330

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  488 bits (1257), Expect = e-173
 Identities = 203/334 (60%), Positives = 250/334 (74%)

Query: 96  DADLLRATAAGDSTLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRG 155
           D  L R   +  +TL++ +    TSGSGSGLPLL+QRT+A+ I L E IGKGR+GEVWRG
Sbjct: 2   DPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRG 61

Query: 156 VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY 215
            W GE VAVKIF SR+E SW RE EIY TV+LRHENILG+I +D     + TQLWLV+ Y
Sbjct: 62  KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121

Query: 216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK 275
           H  GSL+D+LNR T+    M+K+ LS  +GL HLH EI GTQGKPAIAHRD+KSKNILVK
Sbjct: 122 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181

Query: 276 TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIY 335
            NGTC IAD GLAV +   ++ +DI PN RVGTKRYM+PE+LD+SINM  FESFK+ADIY
Sbjct: 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 241

Query: 336 ALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDS 395
           A+GLV WE+ RR    GI E+Y+ PY+DLVP DPS ++MRKV+C  + RP +PNRW S  
Sbjct: 242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCE 301

Query: 396 TLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
            L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 302 ALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  471 bits (1213), Expect = e-167
 Identities = 206/299 (68%), Positives = 253/299 (84%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
           +QRT+A+ I+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct: 2   MQRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           ENILG+I SDMTSR+S TQLWL+THYH  GSLYD+L  TTL+    ++I LSI +GL HL
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+  NPRVGTK
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR  +NGI E+YK P++D+VP DP
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  437 bits (1125), Expect = e-153
 Identities = 119/318 (37%), Positives = 189/318 (59%), Gaps = 8/318 (2%)

Query: 115 DASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS 174
               +SG   G   L  ++    + L E   +GR+G VW+     E VAVKIF  +D+ S
Sbjct: 5   HHHHSSGVDLGTENLYFQS--MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQS 62

Query: 175 WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ 234
           W  E E+YS   ++HENIL +IG++    +    LWL+T +H  GSL D L    ++ ++
Sbjct: 63  WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNE 122

Query: 235 MMKICLSIVNGLVHLHTEIFGTQG--KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
           +  I  ++  GL +LH +I G +   KPAI+HRDIKSKN+L+K N T  IADFGLA+ + 
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182

Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA-N 351
              +  D   + +VGT+RYM+PE+L+ +IN    ++F + D+YA+GLVLWE+  R  A +
Sbjct: 183 AGKSAGDT--HGQVGTRRYMAPEVLEGAINFQ-RDAFLRIDMYAMGLVLWELASRCTAAD 239

Query: 352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQN 411
           G  +EY  P+ + +   PS +DM++V+   ++RPVL + W   + +  + + ++ECW  +
Sbjct: 240 GPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD 299

Query: 412 ANVRLSALRVKKTLIKLA 429
           A  RLSA  V + + ++ 
Sbjct: 300 AEARLSAGCVGERITQMQ 317

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  404 bits (1040), Expect = e-140
 Identities = 105/304 (34%), Positives = 171/304 (56%), Gaps = 11/304 (3%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
             + L E IG+GRYG V++G      VAVK+F   +  ++  E  IY   L+ H+NI  +
Sbjct: 13  DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72

Query: 196 IGSD-MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI- 253
           I  D   + +   +  LV  Y+  GSL  +L+  T +     ++  S+  GL +LHTE+ 
Sbjct: 73  IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELP 132

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ----LSNKMDIPPNPRVGTK 309
            G   KPAI+HRD+ S+N+LVK +GTCVI+DFGL++  +        + D      VGT 
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192

Query: 310 RYMSPEILDESINMDCFES-FKKADIYALGLVLWEVCRRTKA---NGIFEEYKAPYHDLV 365
           RYM+PE+L+ ++N+   ES  K+ D+YALGL+ WE+  R           EY+  +   V
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDS-TLNAMTKVMKECWHQNANVRLSALRVKKT 424
              P+F+DM+ ++  ++QRP  P  W  +S  + ++ + +++CW Q+A  RL+A   ++ 
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312

Query: 425 LIKL 428
           + +L
Sbjct: 313 MAEL 316

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  193 bits (492), Expect = 7e-59
 Identities = 61/286 (21%), Positives = 121/286 (42%), Gaps = 46/286 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENI 192
           KQ++    + +   GE+W+G W G ++ VK+   RD ++        E     +  H N+
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHL 249
           L  +G+            L+TH+  +GSLY+ L+  T   ++  Q +K  L +  G+  L
Sbjct: 70  LPVLGA--CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           HT       +P I    + S+++++  + T  I+   +  S+             R+   
Sbjct: 128 HTL------EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG---------RMYAP 172

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
            +++PE L +            AD+++  ++LWE+  R          + P+ DL  M+ 
Sbjct: 173 AWVAPEALQKKPEDTNRR---SADMWSFAVLLWELVTR----------EVPFADLSNMEI 219

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                   + ++  RP +P           ++K+MK C +++   R
Sbjct: 220 GMK-----VALEGLRPTIP-----PGISPHVSKLMKICMNEDPAKR 255

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  189 bits (483), Expect = 4e-57
 Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 55/291 (18%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENI 192
             +++ E IG G +G V R  WHG +VAVKI   +D  +        E+     LRH NI
Sbjct: 37  CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96

Query: 193 LGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----NRTTLNHHQMMKICLSIVNG 245
           + ++G+        TQ   L +VT Y S GSLY  L     R  L+  + + +   +  G
Sbjct: 97  VLFMGA-------VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +LH         P I HR++KS N+LV    T  + DFGL+   +             
Sbjct: 150 MNYLHNR------NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS----KSA 199

Query: 306 VGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
            GT  +M+PE+L +       E   +K+D+Y+ G++LWE+             + P+ +L
Sbjct: 200 AGTPEWMAPEVLRD-------EPSNEKSDVYSFGVILWELATL----------QQPWGNL 242

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            P           +    +R  +P      +    +  +++ CW      R
Sbjct: 243 NPAQVVAA-----VGFKCKRLEIP-----RNLNPQVAAIIEGCWTNEPWKR 283

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  185 bits (471), Expect = 3e-55
 Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 61/300 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE-----ASWSRETEIYSTVLLRHE 190
           +Q+ + E IGKGR+G+V+ G WHGE VA+++     +      ++ RE   Y     RHE
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQ--TRHE 89

Query: 191 NILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNG 245
           N++ ++G       +C     L ++T      +LY  +   +  L+ ++  +I   IV G
Sbjct: 90  NVVLFMG-------ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VSYSQLSNKMDI 300
           + +LH           I H+D+KSKN+    NG  VI DFGL      +   +  +K+ I
Sbjct: 143 MGYLHA--------KGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRI 193

Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESF---KKADIYALGLVLWEVCRRTKANGIFEEY 357
                 G   +++PEI+ +       +     K +D++ALG + +E+  R          
Sbjct: 194 QN----GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR---------- 239

Query: 358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
           + P+         +            +P L    +       ++ ++  CW      R +
Sbjct: 240 EWPFKTQPAEAIIW------QMGTGMKPNLSQIGMGK----EISDILLFCWAFEQEERPT 289

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  179 bits (456), Expect = 3e-53
 Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 55/288 (19%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILG 194
           K+I + E +G+G +G V +  W  ++VA+K   S  E  ++  E    S   + H NI+ 
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSR--VNHPNIVK 65

Query: 195 YIGSDMTSRNSCTQ-LWLVTHYHSFGSLYDHL----NRTTLNHHQMMKICLSIVNGLVHL 249
             G       +C   + LV  Y   GSLY+ L              M  CL    G+ +L
Sbjct: 66  LYG-------ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
           H+         A+ HRD+K  N+L+   GT + I DFG A                  G+
Sbjct: 119 HSMQP-----KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-------KGS 166

Query: 309 KRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
             +M+PE+ +         ++ +K D+++ G++LWEV  R          + P+ ++   
Sbjct: 167 AAWMAPEVFEG-------SNYSEKCDVFSWGIILWEVITR----------RKPFDEI--G 207

Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            P+F  M  V   +  RP L       +    +  +M  CW ++ + R
Sbjct: 208 GPAFRIMWAV--HNGTRPPLI-----KNLPKPIESLMTRCWSKDPSQR 248

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  178 bits (453), Expect = 4e-53
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 62/297 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSR-----ETEIYSTVLLRHE 190
            +++L E IG G +G+V+R  W G+ VAVK      +   S+       E     +L+H 
Sbjct: 7   AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66

Query: 191 NILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV 247
           NI+   G        C +   L LV  +   G L   L+   +    ++   + I  G+ 
Sbjct: 67  NIIALRG-------VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMN 119

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILV--------KTNGTCVIADFGLAVSYSQLSNKMD 299
           +LH      +    I HRD+KS NIL+         +N    I DFGLA  + + + KM 
Sbjct: 120 YLH-----DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMS 173

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYK 358
                  G   +M+PE++           F K +D+++ G++LWE+             +
Sbjct: 174 -----AAGAYAWMAPEVIRA-------SMFSKGSDVWSYGVLLWELLTG----------E 211

Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            P+  +  +  ++      + +++    +P      +      K+M++CW+ + + R
Sbjct: 212 VPFRGIDGLAVAYG-----VAMNKLALPIP-----STCPEPFAKLMEDCWNPDPHSR 258

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  177 bits (452), Expect = 7e-53
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 54/292 (18%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD-----EASWSRETEIYSTVLLRHE 190
            QI++ + IG G +G V++G WHG+ VAVK+            ++  E  +      RH 
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHV 80

Query: 191 NILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
           NIL ++G         T   L +VT +    SLY HL  + T     +++ I      G+
Sbjct: 81  NILLFMGY-------STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 133

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNP 304
            +LH          +I HRD+KS NI +  + T  I DFGLA   S    S++ +     
Sbjct: 134 DYLHA--------KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS-- 183

Query: 305 RVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
             G+  +M+PE+    I M     +  ++D+YA G+VL+E+             + PY +
Sbjct: 184 --GSILWMAPEV----IRMQDSNPYSFQSDVYAFGIVLYELMTG----------QLPYSN 227

Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           +   D   +    ++      P L    V  +    M ++M EC  +  + R
Sbjct: 228 INNRDQIIE----MVGRGSLSPDLSK--VRSNCPKRMKRLMAECLKKKRDER 273

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  172 bits (439), Expect = 7e-51
 Identities = 65/313 (20%), Positives = 115/313 (36%), Gaps = 64/313 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWS----------RETEIYS 183
            +I   + IGKG +G V +G        VA+K     D    +          RE  I S
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ-LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
              L H NI+   G              +V  +   G LY  L      +     +++ L
Sbjct: 79  N--LNHPNIVKLYG-------LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML 129

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-----TCVIADFGLAVSYSQLS 295
            I  G+ ++  +       P I HRD++S NI +++          +ADFGL+       
Sbjct: 130 DIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV 183

Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE 355
           + +       +G  ++M+PE +            +KAD Y+  ++L+ +           
Sbjct: 184 SGL-------LGNFQWMAPETIGAEEES----YTEKADTYSFAMILYTILTG-------- 224

Query: 356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
             + P+ +       F +M   I  +  RP +P     +     +  V++ CW  +   R
Sbjct: 225 --EGPFDEYSYGKIKFINM---IREEGLRPTIP-----EDCPPRLRNVIELCWSGDPKKR 274

Query: 416 LSALRVKKTLIKL 428
                + K L +L
Sbjct: 275 PHFSYIVKELSEL 287

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  160 bits (408), Expect = 3e-46
 Identities = 62/300 (20%), Positives = 106/300 (35%), Gaps = 64/300 (21%)

Query: 137 QISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWS---RETEIYSTVLLRHEN 191
            +   E +GKG +G+  +      GE + +K     DE +     +E ++     L H N
Sbjct: 11  DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC--LEHPN 68

Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
           +L +IG          +   L  +T Y   G+L   +    +     Q +     I +G+
Sbjct: 69  VLKFIGV-------LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGM 121

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----------VSYSQLSN 296
            +LH+          I HRD+ S N LV+ N   V+ADFGLA               L  
Sbjct: 122 AYLHS-----MN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFE 355
                    VG   +M+PE+++         S+ +K D+++ G+VL E+           
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMIN-------GRSYDEKVDVFSFGIVLCEII---------- 216

Query: 356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                  D +P    F     +          P      +   +   +   C   +   R
Sbjct: 217 GRVNADPDYLPRTMDFG----LNVRGFLDRYCP-----PNCPPSFFPITVRCCDLDPEKR 267

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  139 bits (351), Expect = 5e-38
 Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 49/286 (17%)

Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILG 194
             IG+G +  V++G+       VA            +   +  E E+     L+H NI+ 
Sbjct: 32  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG--LQHPNIVR 89

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEI 253
           +  S  ++      + LVT   + G+L  +L R   +    +   C  I+ GL  LHT  
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR- 148

Query: 254 FGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 P I HRD+K  NI +    G+  I D GLA        K        +GT  +M
Sbjct: 149 -----TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV------IGTPEFM 197

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+ +E  +       +  D+YA G+ + E+             + PY +       + 
Sbjct: 198 APEMYEEKYD-------ESVDVYAFGMCMLEMA----------TSEYPYSECQNAAQIY- 239

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
                      +P   ++         + ++++ C  QN + R S 
Sbjct: 240 ----RRVTSGVKPASFDKVAIP----EVKEIIEGCIRQNKDERYSI 277

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  135 bits (343), Expect = 8e-37
 Identities = 60/287 (20%), Positives = 96/287 (33%), Gaps = 60/287 (20%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIFF-----SRDEASWSRETEIYSTVLLRHENIL 193
             +G G YGEV++       G   AVK         +D A    E   +   + +H   +
Sbjct: 63  SRLGHGSYGEVFKVR-SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE-KVGQHPCCV 120

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHT 251
               +          L+L T      SL  H      +L   Q+       +  L HLH+
Sbjct: 121 RLEQAWEEG----GILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
           +         + H D+K  NI +   G C + DFGL     +L          + G  RY
Sbjct: 176 Q--------GLVHLDVKPANIFLGPRGRCKLGDFGLL---VELGTAG--AGEVQEGDPRY 222

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE+L  S           AD+++LGL + EV    +            H         
Sbjct: 223 MAPELLQGSYG-------TAADVFSLGLTILEVACNME----------LPHGGEGWQQ-- 263

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
             +R+        P       S+     +  V+      +  +R +A
Sbjct: 264 --LRQGYL----PPEFTAGLSSE-----LRSVLVMMLEPDPKLRATA 299

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  131 bits (331), Expect = 6e-35
 Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 28/225 (12%)

Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWS---RETEIYSTVLLRHE 190
           K     + +G+G +  V    G+  G   A+K     ++       RE +++   L  H 
Sbjct: 29  KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR--LFNHP 86

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQM-----MKICLSIVNG 245
           NIL  +   +  R +  + WL+  +   G+L++ + R     + +     + + L I  G
Sbjct: 87  NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-VSYSQLSNKMDIPPNP 304
           L  +H            AHRD+K  NIL+   G  V+ D G    +   +          
Sbjct: 147 LEAIH--------AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198

Query: 305 ----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
               +  T  Y +PE+     +    E   + D+++LG VL+ + 
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDE---RTDVWSLGCVLYAMM 240

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  127 bits (321), Expect = 9e-34
 Identities = 84/308 (27%), Positives = 124/308 (40%), Gaps = 63/308 (20%)

Query: 135 AKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRH 189
                L E IG G    V         E VA+K   + ++   S +    EI +     H
Sbjct: 14  RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHH 72

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD---------HLNRTTLNHHQMMKICL 240
            NI+ Y  S +       +LWLV    S GS+ D               L+   +  I  
Sbjct: 73  PNIVSYYTSFVVK----DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            ++ GL +LH       G+  I HRD+K+ NIL+  +G+  IADFG  VS + L+   DI
Sbjct: 129 EVLEGLEYLHK-----NGQ--I-HRDVKAGNILLGEDGSVQIADFG--VS-AFLATGGDI 177

Query: 301 PPNPR----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
             N      VGT  +M+PE++++    D      KADI++ G+   E+     A G    
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDF-----KADIWSFGITAIEL-----ATG---- 223

Query: 357 YKAPYHDLVPMDPSFDDMRKVICIDQQR--PVLPNRWVSDSTLNAMTKVMKE----CWHQ 410
             APYH   PM        KV+ +  Q   P L         L    K  ++    C  +
Sbjct: 224 -AAPYHKYPPM--------KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQK 274

Query: 411 NANVRLSA 418
           +   R +A
Sbjct: 275 DPEKRPTA 282

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  128 bits (323), Expect = 3e-33
 Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 45/244 (18%)

Query: 140 LSECIGKGR--YGEVWRG--VWHGENVAVKIFFSRDEASWSRET------EIYSTVLLRH 189
           L   IGKG      V        GE V V+     +  + S E       E++ + L  H
Sbjct: 29  LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI---NLEACSNEMVTFLQGELHVSKLFNH 85

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGL 246
            NI+ Y  + +       +LW+VT + ++GS  D +       +N   +  I   ++  L
Sbjct: 86  PNIVPYRATFIAD----NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK---MDIPPN 303
            ++H       G   + HR +K+ +IL+  +G   ++     +S      +   +   P 
Sbjct: 142 DYIHH-----MGY--V-HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 193

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
             V    ++SPE+L +++         K+DIY++G+   E+     ANG       P+ D
Sbjct: 194 YSVKVLPWLSPEVLQQNLQGYDA----KSDIYSVGITACEL-----ANG-----HVPFKD 239

Query: 364 LVPM 367
           +   
Sbjct: 240 MPAT 243

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  125 bits (316), Expect = 4e-33
 Identities = 61/305 (20%), Positives = 118/305 (38%), Gaps = 71/305 (23%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           E IG G +G+V++   H   G+   +K + ++ ++A   RE +  +   L H NI+ Y G
Sbjct: 17  ELIGSGGFGQVFK-AKHRIDGKTYVIKRVKYNNEKAE--REVKALAK--LDHVNIVHYNG 71

Query: 198 S------------DMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSI 242
                          +SR+    L++   +   G+L   +       L+    +++   I
Sbjct: 72  CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
             G+ ++H++         + +RD+K  NI +       I DFGL    + L N      
Sbjct: 132 TKGVDYIHSK--------KLINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKR-- 178

Query: 303 NPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
               GT RYMSPE +  +          K+ D+YALGL+L E+                 
Sbjct: 179 TRSKGTLRYMSPEQISSQDYG-------KEVDLYALGLILAELLH--------------- 216

Query: 362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV 421
                +  +  +  K    D +  ++ + +           ++++   +    R +   +
Sbjct: 217 -----VCDTAFETSKFFT-DLRDGIISDIFDKK-----EKTLLQKLLSKKPEDRPNTSEI 265

Query: 422 KKTLI 426
            +TL 
Sbjct: 266 LRTLT 270

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  124 bits (314), Expect = 9e-33
 Identities = 82/288 (28%), Positives = 129/288 (44%), Gaps = 57/288 (19%)

Query: 140 LSECIGKGRYGEVWRGV--WHGENVAVKIF-FSRDEASWSR-ETEIYSTVLLRHENILGY 195
             E IGKG +GEV++G+     + VA+KI      E      + EI          +  Y
Sbjct: 26  KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
            GS +      T+LW++  Y   GS  D L    L+  Q+  I   I+ GL +LH+E   
Sbjct: 86  YGSYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE--- 138

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                   HRDIK+ N+L+  +G   +ADFG+A    QL++      N  VGT  +M+PE
Sbjct: 139 -----KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQI-KRNTFVGTPFWMAPE 189

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
           ++ +S   D      KADI++LG+   E+     A G     + P+ +L P       M+
Sbjct: 190 VIKQS-AYDS-----KADIWSLGITAIEL-----ARG-----EPPHSELHP-------MK 226

Query: 376 KVICIDQQR-PVLPNRWVSDSTLNAMTKVMKE----CWHQNANVRLSA 418
            +  I +   P L   +         +K +KE    C ++  + R +A
Sbjct: 227 VLFLIPKNNPPTLEGNY---------SKPLKEFVEACLNKEPSFRPTA 265

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  124 bits (314), Expect = 1e-32
 Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 41/235 (17%)

Query: 139 SLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILG 194
            + E +G+G YG V++      G+ VA+K      +       EI  +++      +++ 
Sbjct: 32  DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEI--SIMQQCDSPHVVK 88

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           Y GS   +    T LW+V  Y   GS+ D   L   TL   ++  I  S + GL +LH  
Sbjct: 89  YYGSYFKN----TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                      HRDIK+ NIL+ T G   +ADFG+A    QL++ M    N  +GT  +M
Sbjct: 145 --------RKIHRDIKAGNILLNTEGHAKLADFGVA---GQLTDTMA-KRNTVIGTPFWM 192

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           +PE++ E    +C      ADI++LG+   E+     A G     K PY D+ PM
Sbjct: 193 APEVIQEI-GYNC-----VADIWSLGITAIEM-----AEG-----KPPYADIHPM 231

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  123 bits (311), Expect = 3e-32
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 35/229 (15%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIF-FSRDEASWSRETEIYSTVLLRHENILGYIGS 198
           E IG+G  G V+    V  G+ VA++     +         EI      ++ NI+ Y+ S
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +       +LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH+       
Sbjct: 86  YLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN------ 135

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
              + HRDIKS NIL+  +G+  + DFG     +Q++ +     +  VGT  +M+PE++ 
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFC---AQITPEQS-KRSTMVGTPYWMAPEVVT 189

Query: 319 ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
                       K DI++LG++  E+       G     + PY +  P+
Sbjct: 190 RK-AYGP-----KVDIWSLGIMAIEM-----IEG-----EPPYLNENPL 222

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  123 bits (310), Expect = 6e-32
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 39/241 (16%)

Query: 139 SLSECIGKGRYGEVWRGV--WHGENVAVKIF-FSRDEASW-SRETEIYSTVLLRHENILG 194
            L E +G G YG+V++G     G+  A+K+   + DE     +E  +       H NI  
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKK-YSHHRNIAT 85

Query: 195 YIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHL 249
           Y G+           QLWLV  +   GS+ D +  T   TL    +  IC  I+ GL HL
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---V 306
           H           + HRDIK +N+L+  N    + DFG++   +QL   +      R   +
Sbjct: 146 HQH--------KVIHRDIKGQNVLLTENAEVKLVDFGVS---AQLDRTV----GRRNTFI 190

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           GT  +M+PE++    N D    F K+D+++LG+   E+     A G       P  D+ P
Sbjct: 191 GTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEM-----AEG-----APPLCDMHP 239

Query: 367 M 367
           M
Sbjct: 240 M 240

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  122 bits (307), Expect = 6e-32
 Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 57/235 (24%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRET---EIYS-TVLLRHENILG 194
           E IG G +G V++ V     G   A+K        S   +    E+Y+  VL +H +++ 
Sbjct: 17  EKIGSGEFGSVFKCV-KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHL 249
           Y  +          + +   Y + GSL D ++      +     ++  + L +  GL ++
Sbjct: 76  YFSAWAED----DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-------------------IADFGLAVS 290
           H+         ++ H DIK  NI +                          I D G    
Sbjct: 132 HSM--------SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-- 181

Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
            +++S+     P    G  R+++ E+L E+          KADI+AL L +    
Sbjct: 182 -TRISS-----PQVEEGDSRFLANEVLQENYTHL-----PKADIFALALTVVCAA 225

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  121 bits (305), Expect = 3e-31
 Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 41/232 (17%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGY 195
             IG+G  G V        G  VAVK+    D     R   +++ V++    +H N++  
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEM 107

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
             S +       +LW++  +   G+L D +++  LN  Q+  +C +++  L +LH +   
Sbjct: 108 YKSYLVG----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ--- 160

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 + HRDIKS +IL+  +G   ++DFG     +Q+S  +       VGT  +M+PE
Sbjct: 161 -----GVIHRDIKSDSILLTLDGRVKLSDFGFC---AQISKDVP-KRKSLVGTPYWMAPE 211

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           ++  S          + DI++LG+++ E+      +G     + PY    P+
Sbjct: 212 VISRS------LYATEVDIWSLGIMVIEM-----VDG-----EPPYFSDSPV 247

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  120 bits (303), Expect = 4e-31
 Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 38/228 (16%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
             +G+G +G+V +   +       A+K     +E   +  +E+     L H+ ++ Y  +
Sbjct: 12  AVLGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70

Query: 199 ---------DMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLV 247
                     MT+    + L++   Y   G+LYD ++         +  ++   I+  L 
Sbjct: 71  WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP--- 304
           ++H+     QG   I HRD+K  NI +  +    I DFGLA +  +  + + +       
Sbjct: 131 YIHS-----QG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182

Query: 305 -------RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                   +GT  Y++ E+LD + + +     +K D+Y+LG++ +E+ 
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYN-----EKIDMYSLGIIFFEMI 225

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  119 bits (301), Expect = 1e-30
 Identities = 60/258 (23%), Positives = 101/258 (39%), Gaps = 43/258 (16%)

Query: 116 ASLTSGSGSGLPLLIQRTLA---KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSR 170
            SL   SG      + +T+     ++ +   + +G +  V+  + V  G   A+K   S 
Sbjct: 5   GSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN 64

Query: 171 DEASWS---RETEIYSTVLLRHENILGYIGSDMTSR----NSCTQLWLVTHYHSFGSLYD 223
           +E       +E       L  H NI+ +  +    +        +  L+T     G L +
Sbjct: 65  EEEKNRAIIQEVCFMKK-LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVE 122

Query: 224 HLNRTTLNHH----QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT 279
            L +           ++KI       + H+H +      KP I HRD+K +N+L+   GT
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ------KPPIIHRDLKVENLLLSNQGT 176

Query: 280 CVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILD----ESINMDCFE 327
             + DFG A         S+S     +      R  T  Y +PEI+D      I      
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG----- 231

Query: 328 SFKKADIYALGLVLWEVC 345
             +K DI+ALG +L+ +C
Sbjct: 232 --EKQDIWALGCILYLLC 247

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  117 bits (295), Expect = 4e-30
 Identities = 52/232 (22%), Positives = 86/232 (37%), Gaps = 46/232 (19%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKI----FFSRDEASWSRETEIYSTVLLRHENILG 194
           +C+G+G +G V+    +     N A+K               RE +  +   L H  I+ 
Sbjct: 11  QCLGRGGFGVVFE-AKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK--LEHPGIVR 67

Query: 195 YIGSDMTSRNSCTQ--------LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS----I 242
           Y  + +    +           L++        +L D +N       +   +CL     I
Sbjct: 68  YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQL 294
              +  LH+     +G   + HRD+K  NI    +    + DFGL               
Sbjct: 128 AEAVEFLHS-----KG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179

Query: 295 SNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
                     +VGTK YMSPE +   S +        K DI++LGL+L+E+ 
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYS-------HKVDIFSLGLILFELL 224

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  118 bits (297), Expect = 4e-30
 Identities = 47/231 (20%), Positives = 82/231 (35%), Gaps = 37/231 (16%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
             +G+G +GEV R      G   AVK    R E     E    +   L    I+   G+ 
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKV--RLEVFRVEELVACAG--LSSPRIVPLYGAV 119

Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
                    + +       GSL   + +   L   + +      + GL +LHT       
Sbjct: 120 REG----PWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR------ 169

Query: 259 KPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEI 316
              I H D+K+ N+L+ ++G+   + DFG A+          +       GT+ +M+PE+
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           +             K DI++   ++  +      NG       P+      
Sbjct: 228 VMGK------PCDAKVDIWSSCCMMLHM-----LNG-----CHPWTQYFRG 262

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  117 bits (294), Expect = 5e-30
 Identities = 73/286 (25%), Positives = 113/286 (39%), Gaps = 49/286 (17%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
             +GKG YG V+ G        +A+K I       S     EI     L+H+NI+ Y+GS
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL----NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
              +      + +       GSL   L         N   +      I+ GL +LH    
Sbjct: 88  FSEN----GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 141

Query: 255 GTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                  I HRDIK  N+L+ T +G   I+DFG +    +L+           GT +YM+
Sbjct: 142 ------QIVHRDIKGDNVLINTYSGVLKISDFGTS---KRLAGINPC-TETFTGTLQYMA 191

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV-PMDPSFD 372
           PEI    I+       K ADI++LG  + E+     A G     K P+++L  P    F 
Sbjct: 192 PEI----IDKGPRGYGKAADIWSLGCTIIEM-----ATG-----KPPFYELGEPQAAMFK 237

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
                + + +  P +P    S          + +C+  + + R  A
Sbjct: 238 -----VGMFKVHPEIPESM-SA----EAKAFILKCFEPDPDKRACA 273

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  117 bits (295), Expect = 5e-30
 Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 36/233 (15%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWS---RETEIYSTVLLRHENILGYI 196
             +G G +G+V++      G   A K+  ++ E        E EI +T    H  I+  +
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT--CDHPYIVKLL 82

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
           G+         +LW++  +   G++          L   Q+  +C  ++  L  LH++  
Sbjct: 83  GAYYHD----GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK-- 136

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRD+K+ N+L+   G   +ADFG++   ++    +    +  +GT  +M+P
Sbjct: 137 ------RIIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQ-KRDSFIGTPYWMAP 186

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           E++      D    + KADI++LG+ L E+     A       + P+H+L PM
Sbjct: 187 EVVMCETMKDTPYDY-KADIWSLGITLIEM-----AQI-----EPPHHELNPM 228

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  116 bits (293), Expect = 1e-29
 Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 57/291 (19%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK-IFFSRDEASWSRE---TEIYSTVL--LRHENIL 193
           + IG+G++ EV+R      G  VA+K +       + +R     EI   +L  L H N++
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI--DLLKQLNHPNVI 95

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVH 248
            Y  S +       +L +V      G L   +         +    + K  + + + L H
Sbjct: 96  KYYASFIED----NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +H+          + HRDIK  N+ +   G   + D GL       S+K     +  VGT
Sbjct: 152 MHSR--------RVMHRDIKPANVFITATGVVKLGDLGLG---RFFSSKTTA-AHSLVGT 199

Query: 309 KRYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
             YMSPE + +   N        K+DI++LG +L+E+         F   K   + L   
Sbjct: 200 PYYMSPERIHENGYN-------FKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKK 249

Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
                     I      P+  + +  +     + +++  C + +   R   
Sbjct: 250 ----------IEQCDYPPLPSDHYSEE-----LRQLVNMCINPDPEKRPDV 285

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  116 bits (292), Expect = 1e-29
 Identities = 58/305 (19%), Positives = 116/305 (38%), Gaps = 63/305 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSRDEASWSRETEIYSTV 185
           + +     +G+G +G+V    +  E       VAVK           A   +E EI    
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN- 79

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIV 243
            L HENI+ Y G  + + +    + L+  +   GSL ++L  N+  +N  Q +K  + I 
Sbjct: 80  -LYHENIVKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
            G+ +L +  +         HRD+ ++N+LV++     I DFGL            I  +
Sbjct: 137 KGMDYLGSRQY--------VHRDLAARNVLVESEHQVKIGDFGLT---------KAIETD 179

Query: 304 P-----RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV---CRRTKA-- 350
                 +        + +P    E +    F     +D+++ G+ L E+   C    +  
Sbjct: 180 KEYYTVKDDRDSPVFWYAP----ECLMQSKFYI--ASDVWSFGVTLHELLTYCDSDSSPM 233

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
               +     +  +            ++   ++   LP      +  + + ++M++CW  
Sbjct: 234 ALFLKMIGPTHGQMTVTR--------LVNTLKEGKRLPC---PPNCPDEVYQLMRKCWEF 282

Query: 411 NANVR 415
             + R
Sbjct: 283 QPSNR 287

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  113 bits (286), Expect = 5e-29
 Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 74/316 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS---RETEIYSTVLLRHENI 192
           K++ L + IGKG +G+V  G + G  VAVK    +++A+      E  + +   LRH N+
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQ--LRHSNL 76

Query: 193 LGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNG 245
           +  +G          +    L++VT Y + GSL D+L    R+ L    ++K  L +   
Sbjct: 77  VQLLG-------VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPN 303
           + +L    F         HRD+ ++N+LV  +    ++DFGL    S +Q + K+ +   
Sbjct: 130 MEYLEGNNF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV--- 178

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 ++ +P    E++    F +  K+D+++ G++LWE         I+   + PY  
Sbjct: 179 ------KWTAP----EALREKKFST--KSDVWSFGILLWE---------IYSFGRVPYPR 217

Query: 364 LVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           +    P  D + +V   ++      P        D    A+ +VMK CWH +A +R S L
Sbjct: 218 I----PLKDVVPRV---EKGYKMDAP--------DGCPPAVYEVMKNCWHLDAAMRPSFL 262

Query: 420 RVKKTLIKLACADMYI 435
           ++++ L  +   ++++
Sbjct: 263 QLREQLEHIKTHELHL 278

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  115 bits (289), Expect = 7e-29
 Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 50/238 (21%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVKIF----FSRDEASWSRETEIYSTVL--LRHENIL 193
             IG G +G V+    V + E VA+K         +E       E+    L  LRH N +
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV--RFLQKLRHPNTI 117

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHT 251
            Y G  +         WLV  Y   GS  D   +++  L   ++  +    + GL +LH+
Sbjct: 118 QYRGCYLRE----HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + HRD+K+ NIL+   G   + DFG A   S ++       N  VGT  +
Sbjct: 173 H--------NMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPA-----NSFVGTPYW 216

Query: 312 MSPEI--LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
           M+PE+    +    D      K D+++LG+   E+     A       K P  ++  M
Sbjct: 217 MAPEVILAMDEGQYDG-----KVDVWSLGITCIEL-----AER-----KPPLFNMNAM 259

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  114 bits (287), Expect = 1e-28
 Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 47/267 (17%)

Query: 135 AKQISLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSR-ETEIYSTVLLR-- 188
           A+ +     IG+G YG V +      G+ +AVK I  + DE    +   ++   V++R  
Sbjct: 21  AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL--DVVMRSS 78

Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT---TLNHHQMMKICLSI 242
               I+ + G+           W+       SF   Y ++       +    + KI L+ 
Sbjct: 79  DCPYIVQFYGALFRE----GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
           V  L HL         K  I HRDIK  NIL+  +G   + DFG  +S  QL + +    
Sbjct: 135 VKALNHLKEN-----LK--IIHRDIKPSNILLDRSGNIKLCDFG--IS-GQLVDSIA--K 182

Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
               G + YM+PE +D S +   ++   ++D+++LG+ L+E+     A G F     PY 
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDV--RSDVWSLGITLYEL-----ATGRF-----PYP 230

Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPN 389
               +   FD + +V  +    P L N
Sbjct: 231 KWNSV---FDQLTQV--VKGDPPQLSN 252

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  113 bits (285), Expect = 2e-28
 Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 61/303 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSRDEASWSRETEIYSTV 185
           + +     +G+G +G+V    +   N      VAVK        +  + W +E +I  T 
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT- 89

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
            L HE+I+ Y G           L LV  Y   GSL D+L R ++   Q++     I  G
Sbjct: 90  -LYHEHIIKYKG--CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEG 146

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP- 304
           + +LH + +         HRD+ ++N+L+  +    I DFGLA           +P    
Sbjct: 147 MAYLHAQHY--------IHRDLAARNVLLDNDRLVKIGDFGLA---------KAVPEGHE 189

Query: 305 ----RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC-----RRTKANG 352
               R        + +P    E +    F     +D+++ G+ L+E+       ++    
Sbjct: 190 YYRVREDGDSPVFWYAP----ECLKEYKFYY--ASDVWSFGVTLYELLTHCDSSQSPPTK 243

Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
             E        +  +         +  + ++   LP     D     +  +MK CW   A
Sbjct: 244 FLELIGIAQGQMTVLR--------LTELLERGERLPR---PDKCPAEVYHLMKNCWETEA 292

Query: 413 NVR 415
           + R
Sbjct: 293 SFR 295

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  112 bits (282), Expect = 2e-28
 Identities = 60/290 (20%), Positives = 108/290 (37%), Gaps = 52/290 (17%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVK-IFFS----RDEASWSRETEIYSTVLLRHENILG 194
             IG G YG     R    G+ +  K + +      ++     E  +     L+H NI+ 
Sbjct: 12  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--LKHPNIVR 69

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-----HQMMKICLSIVNGLVHL 249
           Y    +   N+   L++V  Y   G L   + + T          ++++   +   L   
Sbjct: 70  YYDRIIDRTNTT--LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H     + G   + HRD+K  N+ +       + DFGLA   +  ++         VGT 
Sbjct: 128 HRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA----KTFVGTP 180

Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            YMSPE +   S N       +K+DI++LG +L+E+C        F              
Sbjct: 181 YYMSPEQMNRMSYN-------EKSDIWSLGCLLYELCALMPP---FT------------A 218

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            S  ++   I   + R  +P R+  +     + +++    +     R S 
Sbjct: 219 FSQKELAGKIREGKFRR-IPYRYSDE-----LNEIITRMLNLKDYHRPSV 262

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  115 bits (289), Expect = 3e-28
 Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 74/316 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS---RETEIYSTVLLRHENI 192
           K++ L + IGKG +G+V  G + G  VAVK    +++A+      E  + +   LRH N+
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQ--LRHSNL 248

Query: 193 LGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNG 245
           +  +G          +    L++VT Y + GSL D+L    R+ L    ++K  L +   
Sbjct: 249 VQLLG-------VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPN 303
           + +L    F       + HRD+ ++N+LV  +    ++DFGL    S +Q + K+ +   
Sbjct: 302 MEYLEGNNF-------V-HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV--- 350

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 ++ +P    E++    F +  K+D+++ G++LWE         I+   + PY  
Sbjct: 351 ------KWTAP----EALREKKFST--KSDVWSFGILLWE---------IYSFGRVPY-- 387

Query: 364 LVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
                P       V  +++      P        D    A+  VMK CWH +A  R + L
Sbjct: 388 -----PRIPLKDVVPRVEKGYKMDAP--------DGCPPAVYDVMKNCWHLDAATRPTFL 434

Query: 420 RVKKTLIKLACADMYI 435
           ++++ L  +   ++++
Sbjct: 435 QLREQLEHIRTHELHL 450

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  112 bits (283), Expect = 4e-28
 Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 78/309 (25%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN------VAVKIFFSRDEASWSRETEIY 182
           +++ T   +    + +G G +G V++G+W  E       VA+K    R+  S     EI 
Sbjct: 11  ILKET---EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEIL 65

Query: 183 STVL----LRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQ 234
                   + + ++   +G        C    + L+T    FG L D++  ++  +    
Sbjct: 66  DEAYVMASVDNPHVCRLLGI-------CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------ 288
           ++  C+ I  G+ +L              HRD+ ++N+LVKT     I DFGLA      
Sbjct: 119 LLNWCVQIAKGMNYLEDRRL--------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170

Query: 289 -VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
              Y     K+ I         ++M+     ESI    +    ++D+++ G+ +WE    
Sbjct: 171 EKEYHAEGGKVPI---------KWMAL----ESILHRIYTH--QSDVWSYGVTVWE---- 211

Query: 348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKE 406
                +      PY  +    P+ +       +++ +R   P           +  +M++
Sbjct: 212 -----LMTFGSKPYDGI----PASEISSI---LEKGERLPQP-----PICTIDVYMIMRK 254

Query: 407 CWHQNANVR 415
           CW  +A+ R
Sbjct: 255 CWMIDADSR 263

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  112 bits (282), Expect = 5e-28
 Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 63/305 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKIF---FSRDEASWSRETEIYSTVL 186
           + +   + +GKG +G V    +          VAVK            + RE EI  +  
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 98

Query: 187 LRHENILGYIGSDMTSRNSCTQ-----LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
           L+H+NI+ Y G        C       L L+  Y  +GSL D+L  ++  ++H ++++  
Sbjct: 99  LQHDNIVKYKGV-------CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNK 297
             I  G+ +L T+ +         HRD+ ++NILV+      I DFGL   +   +   K
Sbjct: 152 SQICKGMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 203

Query: 298 MDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
           +      +   +    + +P    ES+    F     +D+++ G+VL+E+    + +   
Sbjct: 204 V------KEPGESPIFWYAP----ESLTESKFSV--ASDVWSFGVVLYELFTYIEKSKSP 251

Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                                 +  +       RP        D   + +  +M ECW+ 
Sbjct: 252 PAEFMRMIGNDK-QGQMIVFHLIELLKNNGRLPRP--------DGCPDEIYMIMTECWNN 302

Query: 411 NANVR 415
           N N R
Sbjct: 303 NVNQR 307

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  111 bits (279), Expect = 7e-28
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 69/308 (22%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKIF---FSRDEASWSRETEIYSTVL 186
           + +   + +GKG +G V    +          VAVK            + RE EI  +  
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67

Query: 187 LRHENILGYIGSDMTSRNSCTQ-----LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
           L+H+NI+ Y G        C       L L+  Y  +GSL D+L  ++  ++H ++++  
Sbjct: 68  LQHDNIVKYKGV-------CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             I  G+ +L T+ +         HRD+ ++NILV+      I DFGL            
Sbjct: 121 SQICKGMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLT---------KV 163

Query: 300 IPPNP-----RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
           +P +      +   +    + +P    ES+    F     +D+++ G+VL+E+    + +
Sbjct: 164 LPQDKEFFKVKEPGESPIFWYAP----ESLTESKFSV--ASDVWSFGVVLYELFTYIEKS 217

Query: 352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKEC 407
                                    +  +       RP        D   + +  +M EC
Sbjct: 218 KSPPAEFMRMIGNDK-QGQMIVFHLIELLKNNGRLPRP--------DGCPDEIYMIMTEC 268

Query: 408 WHQNANVR 415
           W+ N N R
Sbjct: 269 WNNNVNQR 276

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  111 bits (280), Expect = 8e-28
 Identities = 68/305 (22%), Positives = 119/305 (39%), Gaps = 64/305 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKIF---FSRDEASWSRETEIYSTVL 186
           + +     +GKG +G V    +          VAVK         +  + RE +I     
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA-- 80

Query: 187 LRHENILGYIG-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIV 243
           L  + I+ Y G S    R S   L LV  Y   G L D L  +R  L+  +++     I 
Sbjct: 81  LHSDFIVKYRGVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
            G+ +L +            HRD+ ++NILV++     IADFGLA           +P +
Sbjct: 138 KGMEYLGSRRC--------VHRDLAARNILVESEAHVKIADFGLA---------KLLPLD 180

Query: 304 P-----RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEV---CRRTKANG 352
                 R   +    + +P    ES++ + F    ++D+++ G+VL+E+   C +     
Sbjct: 181 KDYYVVREPGQSPIFWYAP----ESLSDNIFSR--QSDVWSFGVVLYELFTYCDK----- 229

Query: 353 IFEEYKAPYHDLVPMDPSFDDM--RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                      L  M    D     +++ + ++   LP      +    + ++MK CW  
Sbjct: 230 ---SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA---PPACPAEVHELMKLCWAP 283

Query: 411 NANVR 415
           +   R
Sbjct: 284 SPQDR 288

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  111 bits (281), Expect = 2e-27
 Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 66/309 (21%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIF----FSRDEASWSRETEIYSTVLLRH 189
           + + L E IG+G +GEV+ G    +N  VAVK          +A + +E  I       H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ--YSH 171

Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
            NI+  IG        CTQ   +++V      G     L      L    ++++      
Sbjct: 172 PNIVRLIGV-------CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VSYSQLSNKMD 299
           G+ +L +       K  I HRD+ ++N LV       I+DFG++       Y+       
Sbjct: 225 GMEYLES-------KCCI-HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
           +P    V   ++ +P    E++N   + S  ++D+++ G++LWE          F    +
Sbjct: 277 VP----V---KWTAP----EALNYGRYSS--ESDVWSFGILLWE---------TFSLGAS 314

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           PY +L     +      V      R   P     +   +A+ ++M++CW      R S  
Sbjct: 315 PYPNL----SNQQTREFV--EKGGRLPCP-----ELCPDAVFRLMEQCWAYEPGQRPSFS 363

Query: 420 RVKKTLIKL 428
            + + L  +
Sbjct: 364 TIYQELQSI 372

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  110 bits (276), Expect = 3e-27
 Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 42/263 (15%)

Query: 135 AKQISLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSR-ETEIYSTVLLR-- 188
              +     +G G  G+VW+      G  +AVK +  S ++    R   ++   V+L+  
Sbjct: 24  INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDL--DVVLKSH 81

Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGL 246
               I+   G+ +T+    T +++        +          +    + K+ ++IV  L
Sbjct: 82  DCPYIVQCFGTFITN----TDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKAL 137

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            +L  +         + HRD+K  NIL+   G   + DFG  +S  +L +      +   
Sbjct: 138 YYLKEKH-------GVIHRDVKPSNILLDERGQIKLCDFG--IS-GRLVDDKA--KDRSA 185

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           G   YM+PE +D            +AD+++LG+ L E+     A G F     PY     
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDI-RADVWSLGISLVEL-----ATGQF-----PYK---N 231

Query: 367 MDPSFDDMRKVICIDQQRPVLPN 389
               F+ + KV  + ++ P+LP 
Sbjct: 232 CKTDFEVLTKV--LQEEPPLLPG 252

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  110 bits (276), Expect = 4e-27
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 36/215 (16%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-IFFS----RDEASWSRETEIYSTVLLRHENILG 194
           + IG+G +G+         G    +K I  S    ++     RE  + +   ++H NI+ 
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN--MKHPNIVQ 87

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHT 251
           Y  S   + +    L++V  Y   G L+  +N          Q++   + I   L H+H 
Sbjct: 88  YRESFEENGS----LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH- 142

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     I HRDIKS+NI +  +GT  + DFG+A     L++ +++     +GT  Y
Sbjct: 143 -------DRKILHRDIKSQNIFLTKDGTVQLGDFGIA---RVLNSTVEL-ARACIGTPYY 191

Query: 312 MSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
           +SPEI  ++  N        K+DI+ALG VL+E+C
Sbjct: 192 LSPEICENKPYN-------NKSDIWALGCVLYELC 219

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  110 bits (276), Expect = 5e-27
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 37/220 (16%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWS---RETEIYSTVLLRHENILGY 195
             +G G  G V++      G  +A K I      A  +   RE ++          I+G+
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC--NSPYIVGF 96

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
            G+  +      ++ +   +   GSL   L +   +    + K+ ++++ GL +L  +  
Sbjct: 97  YGAFYSD----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-- 150

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
               K  I HRD+K  NILV + G   + DFG  VS  QL + M    N  VGT+ YMSP
Sbjct: 151 ---HK--IMHRDVKPSNILVNSRGEIKLCDFG--VS-GQLIDSM---ANSFVGTRSYMSP 199

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
           E L  + +        ++DI+++GL L E+     A G +
Sbjct: 200 ERLQGT-HYSV-----QSDIWSMGLSLVEM-----AVGRY 228

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  111 bits (279), Expect = 5e-27
 Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 26/216 (12%)

Query: 137 QISLSECIGKGRYGEVW-RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
                + +G G  G +  RG++   +VAVK       +   RE ++       H N++ Y
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRE-SDEHPNVIRY 83

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTEI 253
             ++   +      ++     +  +L +++ +    H   + + +     +GL HLH+  
Sbjct: 84  FCTEKDRQF----QYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS-- 136

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTC-----VIADFGLAVSYSQLSNKMDIPPNPRVGT 308
                   I HRD+K  NIL+           +I+DFGL    +   +      +   GT
Sbjct: 137 ---LN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RSGVPGT 189

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
           + +++PE+L E             DI++ G V + V
Sbjct: 190 EGWIAPEMLSEDCKE---NPTYTVDIFSAGCVFYYV 222

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  108 bits (271), Expect = 5e-27
 Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 76/318 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
           ++I+L + +G G++G V  G W G+ +VAVK+    S  E  + +E +      L H  +
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMK--LSHPKL 65

Query: 193 LGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLV 247
           + + G        C++   +++VT Y S G L ++L  +   L   Q++++C  +  G+ 
Sbjct: 66  VKFYGV-------CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN---P 304
            L +  F         HRD+ ++N LV  +    ++DFG+            +  +    
Sbjct: 119 FLESHQF--------IHRDLAARNCLVDRDLCVKVSDFGMT---------RYVLDDQYVS 161

Query: 305 RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
            VGTK   ++ +P    E  +   + S  K+D++A G+++WE         +F   K PY
Sbjct: 162 SVGTKFPVKWSAP----EVFHYFKYSS--KSDVWAFGILMWE---------VFSLGKMPY 206

Query: 362 HDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL 416
                         +V+  + Q     RP            + + ++M  CWH+    R 
Sbjct: 207 DLY--------TNSEVVLKVSQGHRLYRP--------HLASDTIYQIMYSCWHELPEKRP 250

Query: 417 SALRVKKTLIKLACADMY 434
           +  ++  ++  L   D +
Sbjct: 251 TFQQLLSSIEPLREKDKH 268

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  107 bits (270), Expect = 7e-27
 Identities = 63/299 (21%), Positives = 115/299 (38%), Gaps = 76/299 (25%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
            +++  + IG G++G V  G W  ++ VA+K     +  E  +  E E+     L H  +
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMK--LSHPKL 65

Query: 193 LGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLV 247
           +   G        C +   + LVT +   G L D+L   R       ++ +CL +  G+ 
Sbjct: 66  VQLYGV-------CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 118

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN---P 304
           +L              HRD+ ++N LV  N    ++DFG+            +  +    
Sbjct: 119 YLEEACV--------IHRDLAARNCLVGENQVIKVSDFGMT---------RFVLDDQYTS 161

Query: 305 RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
             GTK   ++ SP    E  +   + S  K+D+++ G+++WE         +F E K PY
Sbjct: 162 STGTKFPVKWASP----EVFSFSRYSS--KSDVWSFGVLMWE---------VFSEGKIPY 206

Query: 362 HDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            +            +V+  I       +P              + ++M  CW +    R
Sbjct: 207 ENR--------SNSEVVEDISTGFRLYKP--------RLASTHVYQIMNHCWRERPEDR 249

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  111 bits (280), Expect = 7e-27
 Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 70/296 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 326

Query: 195 YIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
                       ++  +++VT Y S GSL D L       L   Q++ +   I +G+ ++
Sbjct: 327 LYAV-------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSNKMDIPPN 303
               +         HRD+++ NILV  N  C +ADFGLA         ++   K  I   
Sbjct: 380 ERMNY--------VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI--- 428

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 ++ +P    E+     F    K+D+++ G++L E         +  + + PY  
Sbjct: 429 ------KWTAP----EAALYGRFTI--KSDVWSFGILLTE---------LTTKGRVPYPG 467

Query: 364 LVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           +     + + + +V   ++      P             ++  +M +CW +    R
Sbjct: 468 M----VNREVLDQV---ERGYRMPCP--------PECPESLHDLMCQCWRKEPEER 508

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  107 bits (270), Expect = 1e-26
 Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 46/258 (17%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSR-ETEIYSTVLLR---HENILG 194
             +G+G YG V +   V  G+ +AVK I  + +     R   ++   + +R       + 
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVT 70

Query: 195 YIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLH 250
           + G+          +W+       S    Y  +     T+    + KI +SIV  L HLH
Sbjct: 71  FYGALFRE----GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
           +++       ++ HRD+K  N+L+   G   + DFG  +S   L + +    +   G K 
Sbjct: 127 SKL-------SVIHRDVKPSNVLINALGQVKMCDFG--IS-GYLVDDVA--KDIDAGCKP 174

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           YM+PE ++  +N   +    K+DI++LG+ + E+     A   F     PY         
Sbjct: 175 YMAPERINPELNQKGYSV--KSDIWSLGITMIEL-----AILRF-----PYDS---WGTP 219

Query: 371 FDDMRKVICIDQQRPVLP 388
           F  +++V+      P LP
Sbjct: 220 FQQLKQVVEEPS--PQLP 235

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  107 bits (269), Expect = 2e-26
 Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 72/298 (24%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIF--FSRDEASWSRETEIYSTVLLRHEN 191
             I++   +G G+YGEV+ GVW   +  VAVK     + +   + +E  +     ++H N
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE--IKHPN 70

Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNG 245
           ++  +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + 
Sbjct: 71  LVQLLGV-------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + +L  + F         HRD+ ++N LV  N    +ADFGL+   +             
Sbjct: 124 MEYLEKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMT------GDTYTAH 169

Query: 306 VGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
            G K   ++ +P    ES+  + F    K+D++A G++LWE         I     +PY 
Sbjct: 170 AGAKFPIKWTAP----ESLAYNKFSI--KSDVWAFGVLLWE---------IATYGMSPYP 214

Query: 363 DLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            +        D+ +V   +++    +RP        +     + ++M+ CW  N + R
Sbjct: 215 GI--------DLSQVYELLEKDYRMERP--------EGCPEKVYELMRACWQWNPSDR 256

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  110 bits (276), Expect = 2e-26
 Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 70/296 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243

Query: 195 YIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
                       ++  +++VT Y S GSL D L       L   Q++ +   I +G+ ++
Sbjct: 244 LYAV-------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSNKMDIPPN 303
               +         HRD+++ NILV  N  C +ADFGLA         ++   K  I   
Sbjct: 297 ERMNY--------VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI--- 345

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
                 ++ +P    E+     F    K+D+++ G++L E         +  + + PY  
Sbjct: 346 ------KWTAP----EAALYGRFTI--KSDVWSFGILLTE---------LTTKGRVPYPG 384

Query: 364 LVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           +     + + + +V   ++      P             ++  +M +CW +    R
Sbjct: 385 M----VNREVLDQV---ERGYRMPCP--------PECPESLHDLMCQCWRKEPEER 425

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  110 bits (277), Expect = 2e-26
 Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 72/311 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFF--SRDEASWSRETEIYSTVLLRHEN 191
             I++   +G G+YGEV+ GVW   +  VAVK     + +   + +E  +     ++H N
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE--IKHPN 277

Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNG 245
           ++  +G        CT+    +++T + ++G+L D+L   NR  ++   ++ +   I + 
Sbjct: 278 LVQLLGV-------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS----QLSNKMDIP 301
           + +L  + F       I HR++ ++N LV  N    +ADFGL+   +            P
Sbjct: 331 MEYLEKKNF-------I-HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
                   ++ +PE L  +     F    K+D++A G++LWE         I     +PY
Sbjct: 383 -------IKWTAPESLAYNK----FSI--KSDVWAFGVLLWE---------IATYGMSPY 420

Query: 362 HDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
                  P  D  +    +++    +RP        +     + ++M+ CW  N + R S
Sbjct: 421 -------PGIDLSQVYELLEKDYRMERP--------EGCPEKVYELMRACWQWNPSDRPS 465

Query: 418 ALRVKKTLIKL 428
              + +    +
Sbjct: 466 FAEIHQAFETM 476

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  106 bits (268), Expect = 2e-26
 Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 78/300 (26%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
           K ++  + +G G++G V  G W G+ +VA+K+    S  E  +  E ++     L HE +
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN--LSHEKL 81

Query: 193 LGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLV 247
           +   G        CT+   ++++T Y + G L ++L   R      Q++++C  +   + 
Sbjct: 82  VQLYGV-------CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN---P 304
           +L ++ F         HRD+ ++N LV   G   ++DFGL+           +  +    
Sbjct: 135 YLESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLSR---------YVLDDEYTS 177

Query: 305 RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
            VG+K   R+  P    E +    F S  K+DI+A G+++WE         I+   K PY
Sbjct: 178 SVGSKFPVRWSPP----EVLMYSKFSS--KSDIWAFGVLMWE---------IYSLGKMPY 222

Query: 362 HDLVPMDPSFDDMRKVI-CIDQ----QRPVL-PNRWVSDSTLNAMTKVMKECWHQNANVR 415
                         +    I Q     RP L             +  +M  CWH+ A+ R
Sbjct: 223 ERF--------TNSETAEHIAQGLRLYRPHLAS---------EKVYTIMYSCWHEKADER 265

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  107 bits (269), Expect = 3e-26
 Identities = 49/298 (16%), Positives = 113/298 (37%), Gaps = 53/298 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGV-WHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRH 189
           +  S+ + IG G   +V++ +    +  A+K        ++   S+  E    +   L+ 
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN--KLQQ 66

Query: 190 --ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGL 246
             + I+     ++T +     +++V    +   L   L  + +++  +      +++  +
Sbjct: 67  HSDKIIRLYDYEITDQY----IYMVMECGN-IDLNSWLKKKKSIDPWERKSYWKNMLEAV 121

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H       G   I H D+K  N L+  +G   + DFG+A       +   +  + +V
Sbjct: 122 HTIHQ-----HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ--PDTTSVVKDSQV 170

Query: 307 GTKRYMSPEILDESINMDCFESF-----KKADIYALGLVLWE-VCRRTKANGIFEEYKAP 360
           GT  YM PE + +  +             K+D+++LG +L+     +T           P
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT-----------P 219

Query: 361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           +  +         +  +I  + +    P+        +    V+K C  ++   R+S 
Sbjct: 220 FQQI---INQISKLHAIIDPNHEIE-FPD-IPEKDLQD----VLKCCLKRDPKQRISI 268

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  107 bits (268), Expect = 4e-26
 Identities = 65/317 (20%), Positives = 123/317 (38%), Gaps = 78/317 (24%)

Query: 121 GSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSR 170
           G+   L  + + T   ++   + +G G +G V +GVW  E       V +K+       +
Sbjct: 1   GAMKVLARIFKET---ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ 57

Query: 171 DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--N 226
              + +       +  L H +I+  +G        C    L LVT Y   GSL DH+  +
Sbjct: 58  SFQAVTDHMLAIGS--LDHAHIVRLLGL-------CPGSSLQLVTQYLPLGSLLDHVRQH 108

Query: 227 RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG 286
           R  L    ++   + I  G+ +L              HR++ ++N+L+K+     +ADFG
Sbjct: 109 RGALGPQLLLNWGVQIAKGMYYLEEHGM--------VHRNLAARNVLLKSPSQVQVADFG 160

Query: 287 LAVSYSQLSNKMDIPPN----PRVGTK---RYMSPEILDESINMDCFESFKKADIYALGL 339
           +A           +PP+         K   ++M+     ESI+   +    ++D+++ G+
Sbjct: 161 VA---------DLLPPDDKQLLYSEAKTPIKWMAL----ESIHFGKYTH--QSDVWSYGV 205

Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ-QRPVLPNRWVSDSTLN 398
            +WE         +      PY  L       +       +++ +R   P          
Sbjct: 206 TVWE---------LMTFGAEPYAGL----RLAEVPDL---LEKGERLAQP-----QICTI 244

Query: 399 AMTKVMKECWHQNANVR 415
            +  VM +CW  + N+R
Sbjct: 245 DVYMVMVKCWMIDENIR 261

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  106 bits (267), Expect = 5e-26
 Identities = 62/309 (20%), Positives = 120/309 (38%), Gaps = 78/309 (25%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN------VAVKIFFSRDEASWSRETEIY 182
           +++ T   +    + +G G +G V++G+W  E       VA+K    R+  S     EI 
Sbjct: 11  ILKET---EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEIL 65

Query: 183 STVL----LRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQ 234
                   + + ++   +G        C    + L+T    FG L D++  ++  +    
Sbjct: 66  DEAYVMASVDNPHVCRLLGI-------CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------ 288
           ++  C+ I  G+ +L              HRD+ ++N+LVKT     I DFGLA      
Sbjct: 119 LLNWCVQIAKGMNYLEDRRL--------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170

Query: 289 -VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
              Y     K+ I         ++M+     ESI    +    ++D+++ G+ +WE    
Sbjct: 171 EKEYHAEGGKVPI---------KWMAL----ESILHRIYTH--QSDVWSYGVTVWE---- 211

Query: 348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKE 406
                +      PY  +    P+ +       +++ +R   P           +  +M +
Sbjct: 212 -----LMTFGSKPYDGI----PASEISSI---LEKGERLPQP-----PICTIDVYMIMVK 254

Query: 407 CWHQNANVR 415
           CW  +A+ R
Sbjct: 255 CWMIDADSR 263

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  105 bits (264), Expect = 6e-26
 Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 74/298 (24%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
           + + L E +G G++GEVW G ++G   VAVK     S    ++  E  +     L+H+ +
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ--LQHQRL 70

Query: 193 LGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLV 247
           +             TQ  ++++T Y   GSL D L   +   L  ++++ +   I  G+ 
Sbjct: 71  VRLYAV-------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN---P 304
            +    +         HRD+++ NILV    +C IADFGLA           I  N    
Sbjct: 124 FIEERNY--------IHRDLRAANILVSDTLSCKIADFGLA---------RLIEDNEYTA 166

Query: 305 RVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
           R G K   ++ +P    E+IN   F    K+D+++ G++L E         I    + PY
Sbjct: 167 REGAKFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTE---------IVTHGRIPY 211

Query: 362 HDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
             +     + + ++ +   ++     RP        D+    + ++M+ CW +    R
Sbjct: 212 PGM----TNPEVIQNL---ERGYRMVRP--------DNCPEELYQLMRLCWKERPEDR 254

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  105 bits (264), Expect = 8e-26
 Identities = 65/306 (21%), Positives = 111/306 (36%), Gaps = 69/306 (22%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRET---- 179
           LI       + L E +G G +G V RG W   +     VAVK    + +     E     
Sbjct: 14  LIGEK---DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL--KPDVLSQPEAMDDF 68

Query: 180 --EIYSTVLLRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHH 233
             E+ +   L H N++   G             + +VT     GSL D L  ++      
Sbjct: 69  IREVNAMHSLDHRNLIRLYGV-------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 121

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
            + +  + +  G+ +L ++ F         HRD+ ++N+L+ T     I DFGL  +  Q
Sbjct: 122 TLSRYAVQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173

Query: 294 LSNKMDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
             +        +   K    + +P    ES+    F     +D +  G+ LWE       
Sbjct: 174 NDDHY----VMQEHRKVPFAWCAP----ESLKTRTFSH--ASDTWMFGVTLWE------- 216

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQQRPVLPNRWVSDSTLNAMTKVMKECWH 409
             +F   + P+  L            ++  ID++   LP     +     +  VM +CW 
Sbjct: 217 --MFTYGQEPWIGLNGSQ--------ILHKIDKEGERLPR---PEDCPQDIYNVMVQCWA 263

Query: 410 QNANVR 415
                R
Sbjct: 264 HKPEDR 269

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  105 bits (264), Expect = 1e-25
 Identities = 60/334 (17%), Positives = 121/334 (36%), Gaps = 79/334 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVK-----IFFSRDEASWSRETEIYSTV 185
           +Q +L   +GKG +G V       E+     VAVK     I  S D   + RE       
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE- 81

Query: 186 LLRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHL-------NRTTLNHHQMM 236
              H ++   +G      ++       ++  +   G L+  L       N   L    ++
Sbjct: 82  -FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VS 290
           +  + I  G+ +L +  F         HRD+ ++N ++  + T  +ADFGL+        
Sbjct: 141 RFMVDIACGMEYLSSRNF--------IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192

Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
           Y Q      +P    V   ++++     ES+  + +     +D++A G+ +WE+   T+ 
Sbjct: 193 YRQGCASK-LP----V---KWLAL----ESLADNLYTV--HSDVWAFGVTMWEIM--TRG 236

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMK 405
                  + PY  +   +        +   +      ++P           +  +  +M 
Sbjct: 237 -------QTPYAGIENAE--------IYNYLIGGNRLKQP--------PECMEEVYDLMY 273

Query: 406 ECWHQNANVRLSALRVKKTLIKLACADMYIHCSD 439
           +CW  +   R S   ++  L  +      +  S 
Sbjct: 274 QCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  105 bits (263), Expect = 2e-25
 Identities = 50/298 (16%), Positives = 112/298 (37%), Gaps = 53/298 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGV-WHGENVAVKI--FFSRDEASWS---RETEIYSTVLLRH 189
           +  S+ + IG G   +V++ +    +  A+K       D  +      E    +   L+ 
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN--KLQQ 85

Query: 190 --ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGL 246
             + I+     ++T +     +++V    +   L   L  + +++  +      +++  +
Sbjct: 86  HSDKIIRLYDYEITDQY----IYMVMECGN-IDLNSWLKKKKSIDPWERKSYWKNMLEAV 140

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H       G   I H D+K  N L+  +G   + DFG+A       +   +  + +V
Sbjct: 141 HTIHQ-----HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ--PDTTSVVKDSQV 189

Query: 307 GTKRYMSPEILDESINMDCFESFK-----KADIYALGLVLWE-VCRRTKANGIFEEYKAP 360
           GT  YM PE + +  +       K     K+D+++LG +L+     +T           P
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT-----------P 238

Query: 361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           +  +         +  +I  + +    P+        +    V+K C  ++   R+S 
Sbjct: 239 FQQI---INQISKLHAIIDPNHEIE-FPD-IPEKDLQD----VLKCCLKRDPKQRISI 287

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  103 bits (260), Expect = 2e-25
 Identities = 66/306 (21%), Positives = 115/306 (37%), Gaps = 85/306 (27%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWS------RETEIYST 184
           + + L+  +G+G +GEV+ GV+         VAVK    + + +         E  I   
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMKN 69

Query: 185 VLLRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
             L H +I+  IG          +   W++   + +G L  +L  N+ +L    ++   L
Sbjct: 70  --LDHPHIVKLIGI-------IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQL 294
            I   + +L +            HRDI  +NILV +     + DFGL+        Y   
Sbjct: 121 QICKAMAYLESINC--------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172

Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
             ++ I         ++MSP    ESIN   F +   +D++   + +WE         I 
Sbjct: 173 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWE---------IL 208

Query: 355 EEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWH 409
              K P+  L   D        VI  +++     +P        D     +  +M  CW 
Sbjct: 209 SFGKQPFFWLENKD--------VIGVLEKGDRLPKP--------DLCPPVLYTLMTRCWD 252

Query: 410 QNANVR 415
            + + R
Sbjct: 253 YDPSDR 258

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  106 bits (265), Expect = 3e-25
 Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 39/232 (16%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYS 183
           Q T      LS+ +G+G    V+RG  H   G+  A+K+F    F R      RE E+  
Sbjct: 4   QSTSNHLWLLSDILGQGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62

Query: 184 TVLLRHENI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL----NRTTLNHHQMMK 237
              L H+NI  L  I  + T+R+      L+  +   GSLY  L    N   L   + + 
Sbjct: 63  --KLNHKNIVKLFAIEEETTTRH----KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQ 293
           +   +V G+ HL         +  I HR+IK  NI+            + DFG A     
Sbjct: 117 VLRDVVGGMNHLR--------ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF--KKADIYALGLVLWE 343
              +         GT+ Y+ P++ + ++     +       D++++G+  + 
Sbjct: 169 -DEQF----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  106 bits (267), Expect = 3e-25
 Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 68/295 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRE--TEIYSTVLLRHENI 192
           + + L + +G G++GEVW   ++    VAVK    +  +        E      L+H+ +
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKL 245

Query: 193 LGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLV 247
           +             T+  ++++T + + GSL D L     +     +++     I  G+ 
Sbjct: 246 VKLHAV-------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            +    +         HRD+++ NILV  +  C IADFGLA          D     R G
Sbjct: 299 FIEQRNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREG 344

Query: 308 TK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
            K   ++ +P    E+IN   F    K+D+++ G++L E         I    + PY  +
Sbjct: 345 AKFPIKWTAP----EAINFGSFTI--KSDVWSFGILLME---------IVTYGRIPYPGM 389

Query: 365 VPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                + + +R +   ++     RP        ++    +  +M  CW      R
Sbjct: 390 ----SNPEVIRAL---ERGYRMPRP--------ENCPEELYNIMMRCWKNRPEER 429

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  104 bits (261), Expect = 3e-25
 Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 39/232 (16%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYS 183
           Q T      LS+ +G+G    V+RG  H   G+  A+K+F    F R      RE E+  
Sbjct: 4   QSTSNHLWLLSDILGQGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62

Query: 184 TVLLRHENI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL----NRTTLNHHQMMK 237
              L H+NI  L  I  + T+R+      L+  +   GSLY  L    N   L   + + 
Sbjct: 63  --KLNHKNIVKLFAIEEETTTRH----KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQ 293
           +   +V G+ HL         +  I HR+IK  NI+            + DFG A     
Sbjct: 117 VLRDVVGGMNHLR--------ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF--KKADIYALGLVLWE 343
              +         GT+ Y+ P++ + ++     +       D++++G+  + 
Sbjct: 169 -DEQF----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  102 bits (257), Expect = 7e-25
 Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 71/299 (23%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKI----FFSRDEASWSRETEIYSTVL 186
           ++I L  CIG+G++G+V +G++         VA+K             + +E        
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-- 72

Query: 187 LRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSI 242
             H +I+  IG         T+  +W++    + G L   L   + +L+   ++     +
Sbjct: 73  FDHPHIVKLIGV-------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSN 296
              L +L ++ F         HRDI ++N+LV +N    + DFGL+        Y     
Sbjct: 126 STALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
           K+ I         ++M+P    ESIN   F S   +D++  G+ +WE+            
Sbjct: 178 KLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEIL--MHG------ 214

Query: 357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
              P+  +     + D + ++   + +R  +P      +    +  +M +CW  + + R
Sbjct: 215 -VKPFQGV----KNNDVIGRI--ENGERLPMP-----PNCPPTLYSLMTKCWAYDPSRR 261

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  104 bits (261), Expect = 8e-25
 Identities = 49/298 (16%), Positives = 111/298 (37%), Gaps = 53/298 (17%)

Query: 136 KQISLSECIGKGRYGEVWRGV-WHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRH 189
           +  S+ + IG G   +V++ +    +  A+K        ++   S+  E    +   L+ 
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLN--KLQQ 113

Query: 190 --ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGL 246
             + I+     ++T +     +++V    +   L   L  + +++  +      +++  +
Sbjct: 114 HSDKIIRLYDYEITDQY----IYMVMECGN-IDLNSWLKKKKSIDPWERKSYWKNMLEAV 168

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
             +H       G   I H D+K  N L+  +G   + DFG+A       +   +  + +V
Sbjct: 169 HTIHQ-----HG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ--PDTTSVVKDSQV 217

Query: 307 GTKRYMSPEILDESINMDCFESFK-----KADIYALGLVLWE-VCRRTKANGIFEEYKAP 360
           G   YM PE + +  +       K     K+D+++LG +L+     +T           P
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT-----------P 266

Query: 361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           +  +         +  +I         P+        +    V+K C  ++   R+S 
Sbjct: 267 FQQI---INQISKLHAIID-PNHEIEFPD-IPEKDLQD----VLKCCLKRDPKQRISI 315

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  106 bits (265), Expect = 9e-25
 Identities = 75/384 (19%), Positives = 144/384 (37%), Gaps = 75/384 (19%)

Query: 51  SMAILGPVIVLGMLAAVIVLFMRRNHRKKLLAARAIQSDPDCFLADADLLRATAAGDSTL 110
           +MA L       +  A     +R     +       +   +           + +     
Sbjct: 309 NMADLIDGYCRLVNGATQSFIIRPQKEGERALPSIPKLANN-EKQGVRSHTVSVSETDDY 367

Query: 111 REYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-----VAVK 165
            E +D   T    S     IQR   ++I L  CIG+G++G+V +G++         VA+K
Sbjct: 368 AEIIDEEDTYTMPSTRDYEIQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424

Query: 166 IFFSRDEASWSRETEIYSTVL----LRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFG 219
               ++  S S   +     L      H +I+  IG         T+  +W++    + G
Sbjct: 425 TC--KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-------ITENPVWIIMELCTLG 475

Query: 220 SLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
            L   L   + +L+   ++     +   L +L ++ F         HRDI ++N+LV +N
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF--------VHRDIAARNVLVSSN 527

Query: 278 GTCVIADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKK 331
               + DFGL+        Y     K+ I         ++M+P    ESIN   F S   
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPI---------KWMAP----ESINFRRFTS--A 572

Query: 332 ADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRW 391
           +D++  G+ +WE+               P+  +     + D + ++   + +R  +P   
Sbjct: 573 SDVWMFGVCMWEIL--MHG-------VKPFQGV----KNNDVIGRI--ENGERLPMP--- 614

Query: 392 VSDSTLNAMTKVMKECWHQNANVR 415
              +    +  +M +CW  + + R
Sbjct: 615 --PNCPPTLYSLMTKCWAYDPSRR 636

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  102 bits (257), Expect = 1e-24
 Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 75/303 (24%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN------VAVKIF----FSRDEASWSRETEIYSTV 185
             ++  + IG G +GEV++G+    +      VA+K        +    +  E  I    
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ- 102

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
              H NI+   G         ++   + ++T Y   G+L   L       +  Q++ +  
Sbjct: 103 -FSHHNIIRLEGV-------ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 154

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            I  G+ +L    +         HRD+ ++NILV +N  C ++DFGL    S++      
Sbjct: 155 GIAAGMKYLANMNY--------VHRDLAARNILVNSNLVCKVSDFGL----SRVLEDDPE 202

Query: 301 PPNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY 357
                 G K   R+ +P    E+I+   F S   +D+++ G+V+WEV   T         
Sbjct: 203 ATYTTSGGKIPIRWTAP----EAISYRKFTS--ASDVWSFGIVMWEVM--TYG------- 247

Query: 358 KAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
           + PY +L           +V+  I+       P            +A+ ++M +CW Q  
Sbjct: 248 ERPYWEL--------SNHEVMKAINDGFRLPTP--------MDCPSAIYQLMMQCWQQER 291

Query: 413 NVR 415
             R
Sbjct: 292 ARR 294

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  101 bits (255), Expect = 1e-24
 Identities = 62/305 (20%), Positives = 117/305 (38%), Gaps = 78/305 (25%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVK----IFFSRDEASWSRETEIYSTVL 186
             +  +E IG+G +G V+ G     +      AVK    I    + + +  E  I     
Sbjct: 25  LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-- 82

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
             H N+L  +G       S     +V  Y   G L + +           ++   L +  
Sbjct: 83  FSHPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA---------VSYSQLS 295
           G+ +L ++ F         HRD+ ++N ++    T  +ADFGLA           +++  
Sbjct: 140 GMKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 191

Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE 355
            K+ +         ++M+     ES+    F +  K+D+++ G++LWE+   T+      
Sbjct: 192 AKLPV---------KWMAL----ESLQTQKFTT--KSDVWSFGVLLWELM--TRG----- 229

Query: 356 EYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
               PY D+   D        +   + Q     +P        +   + + +VM +CWH 
Sbjct: 230 --APPYPDVNTFD--------ITVYLLQGRRLLQP--------EYCPDPLYEVMLKCWHP 271

Query: 411 NANVR 415
            A +R
Sbjct: 272 KAEMR 276

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  101 bits (255), Expect = 2e-24
 Identities = 58/304 (19%), Positives = 113/304 (37%), Gaps = 78/304 (25%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-----VAVK----IFFSRDEASWSRETEIYSTVLL 187
                  IGKG +G V+ G +  +       A+K    I   +   ++ RE  +     L
Sbjct: 22  VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG--L 79

Query: 188 RHENILGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLS 241
            H N+L  IG                 ++  Y   G L   +   +       ++   L 
Sbjct: 80  NHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQ 132

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-VSYSQLSNKMDI 300
           +  G+ +L  + F         HRD+ ++N ++  + T  +ADFGLA     +     + 
Sbjct: 133 VARGMEYLAEQKF--------VHRDLAARNCMLDESFTVKVADFGLARDILDR-----EY 179

Query: 301 -PPNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
                    +   ++ +     ES+    F +  K+D+++ G++LWE+   T+       
Sbjct: 180 YSVQQHRHARLPVKWTAL----ESLQTYRFTT--KSDVWSFGVLLWELL--TRG------ 225

Query: 357 YKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQN 411
              PY  + P D        +   + Q     +P        +   +++ +VM++CW  +
Sbjct: 226 -APPYRHIDPFD--------LTHFLAQGRRLPQP--------EYCPDSLYQVMQQCWEAD 268

Query: 412 ANVR 415
             VR
Sbjct: 269 PAVR 272

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  100 bits (252), Expect = 6e-24
 Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 74/302 (24%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIF----FSRDEASWSRETEIYSTVL 186
            +I + + IG G  GEV  G           VA+K        R    +  E  I     
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ-- 106

Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLS 241
             H NI+   G         T+     +VT Y   GSL   L  +       Q++ +   
Sbjct: 107 FDHPNIIRLEGV-------VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           +  G+ +L    +         HRD+ ++N+LV +N  C ++DFGL    S++       
Sbjct: 160 VGAGMRYLSDLGY--------VHRDLAARNVLVDSNLVCKVSDFGL----SRVLEDDPDA 207

Query: 302 PNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK 358
                G K   R+ +P    E+I    F S   +D+++ G+V+WEV             +
Sbjct: 208 AYTTTGGKIPIRWTAP----EAIAFRTFSS--ASDVWSFGVVMWEVL--AYG-------E 252

Query: 359 APYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
            PY ++          R VI  +++      P            +A+ ++M +CWH++  
Sbjct: 253 RPYWNM--------TNRDVISSVEEGYRLPAP--------MGCPHALHQLMLDCWHKDRA 296

Query: 414 VR 415
            R
Sbjct: 297 QR 298

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  100 bits (252), Expect = 1e-23
 Identities = 64/304 (21%), Positives = 115/304 (37%), Gaps = 76/304 (25%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVK----IFFSRDEASWSRETEIYSTVL 186
             +  +E IG+G +G V+ G     +      AVK    I    + + +  E  I     
Sbjct: 89  LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-- 146

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
             H N+L  +G       S     +V  Y   G L + +           ++   L +  
Sbjct: 147 FSHPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSN 296
           G+  L ++ F         HRD+ ++N ++    T  +ADFGLA         S    + 
Sbjct: 204 GMKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 255

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
              +P    V   ++M+     ES+    F +  K+D+++ G++LWE+   T+       
Sbjct: 256 AK-LP----V---KWMAL----ESLQTQKFTT--KSDVWSFGVLLWELM--TRG------ 293

Query: 357 YKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQN 411
              PY D+   D        +   + Q     +P        +   + + +VM +CWH  
Sbjct: 294 -APPYPDVNTFD--------ITVYLLQGRRLLQP--------EYCPDPLYEVMLKCWHPK 336

Query: 412 ANVR 415
           A +R
Sbjct: 337 AEMR 340

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  100 bits (252), Expect = 1e-23
 Identities = 72/330 (21%), Positives = 125/330 (37%), Gaps = 74/330 (22%)

Query: 108 STLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-----V 162
             LR ++D          +    +   A  IS+ + +G G +GEV  G     +     V
Sbjct: 17  PGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76

Query: 163 AVKIF----FSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHY 215
           A+K        +    +  E  I       H NI+   G         T+   + +VT Y
Sbjct: 77  AIKTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGV-------VTKSKPVMIVTEY 127

Query: 216 HSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL 273
              GSL   L  +       Q++ +   I +G+ +L    +         HRD+ ++NIL
Sbjct: 128 MENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNIL 179

Query: 274 VKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK---RYMSPEILDESINMDCFESFK 330
           + +N  C ++DFGL     ++            G K   R+ SP    E+I    F S  
Sbjct: 180 INSNLVCKVSDFGL----GRVLEDDPEAAYTTRGGKIPIRWTSP----EAIAYRKFTS-- 229

Query: 331 KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRP 385
            +D+++ G+VLWE         +    + PY ++          + VI  +D+      P
Sbjct: 230 ASDVWSYGIVLWE---------VMSYGERPYWEM--------SNQDVIKAVDEGYRLPPP 272

Query: 386 VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                        A+ ++M +CW ++ N R
Sbjct: 273 --------MDCPAALYQLMLDCWQKDRNNR 294

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 96.9 bits (242), Expect = 7e-23
 Identities = 63/298 (21%), Positives = 111/298 (37%), Gaps = 67/298 (22%)

Query: 136 KQISLSEC-IGKGRYGEVWRGVWHGEN----VAVKI----FFSRDEASWSRETEIYSTVL 186
             + +++  +G G +G V +GV+        VA+K+        D     RE +I     
Sbjct: 9   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ-- 66

Query: 187 LRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSI 242
           L +  I+  IG        C    L LV      G L+  L   R  +    + ++   +
Sbjct: 67  LDNPYIVRLIGV-------CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 119

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
             G+ +L  + F         HRD+ ++N+L+       I+DFGL    S+     D   
Sbjct: 120 SMGMKYLEEKNF--------VHRDLAARNVLLVNRHYAKISDFGL----SKALGADDSYY 167

Query: 303 NPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
             R   K   ++ +P    E IN   F S  ++D+++ G+ +WE              + 
Sbjct: 168 TARSAGKWPLKWYAP----ECINFRKFSS--RSDVWSYGVTMWE---------ALSYGQK 212

Query: 360 PYHDLVPMDPSFDDMRKVI-CIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           PY  +           +V+  I+Q +R   P           +  +M +CW      R
Sbjct: 213 PYKKM--------KGPEVMAFIEQGKRMECP-----PECPPELYALMSDCWIYKWEDR 257

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 97.3 bits (243), Expect = 1e-22
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 38/214 (17%)

Query: 144 IGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRE--TEIYSTVLLRHENILGYIGSDM 200
           +G+G +G+V++G    G  VAVK            +  TE+    +  H N+L   G  M
Sbjct: 38  LGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97

Query: 201 TSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           T     T+  LV  Y + GS+   L     ++  L+  +  +I L    GL +LH     
Sbjct: 98  TP----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-- 151

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV-GTKRYMSP 314
               P I HRD+K+ NIL+      V+ DFGLA    +L +  D      V GT  +++P
Sbjct: 152 ---DPKIIHRDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAP 204

Query: 315 E-----ILDESINMDCFESFKKADIYALGLVLWE 343
           E        E           K D++  G++L E
Sbjct: 205 EYLSTGKSSE-----------KTDVFGYGVMLLE 227

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 96.6 bits (241), Expect = 2e-22
 Identities = 66/326 (20%), Positives = 128/326 (39%), Gaps = 86/326 (26%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWS------RETEIY 182
           ++I++S  +G+G +G V+ GV  G         VA+K     + AS         E  + 
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 82

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-----------NRT 228
                   +++  +G         +Q     ++    + G L  +L              
Sbjct: 83  KE--FNCHHVVRLLGV-------VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133

Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
             +  +M+++   I +G+ +L+   F         HRD+ ++N +V  + T  I DFG+ 
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMT 185

Query: 289 ------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
                   Y +    + +P    V   R+MSP    ES+    F +   +D+++ G+VLW
Sbjct: 186 RDIYETDYYRKGGKGL-LP----V---RWMSP----ESLKDGVFTT--YSDVWSFGVVLW 231

Query: 343 EVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK 402
           E         I    + PY  L     +   +R V  ++      P     D+  + + +
Sbjct: 232 E---------IATLAEQPYQGL----SNEQVLRFV--MEGGLLDKP-----DNCPDMLFE 271

Query: 403 VMKECWHQNANVRLSALRVKKTLIKL 428
           +M+ CW  N  +R S L +  ++ + 
Sbjct: 272 LMRMCWQYNPKMRPSFLEIISSIKEE 297

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 96.2 bits (240), Expect = 2e-22
 Identities = 60/322 (18%), Positives = 120/322 (37%), Gaps = 78/322 (24%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVK-----IFFSRDEASWSRETEIYSTV 185
             + L + +G+G +G V  G    E+     VAVK         R+   +  E       
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD- 92

Query: 186 LLRHENILGYIG-SDMTSRNSCTQLWLVTHYHSFGSLYDHL-------NRTTLNHHQMMK 237
              H N++  +G     S     +  ++  +  +G L+ +L           +    ++K
Sbjct: 93  -FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK 151

Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSY 291
             + I  G+ +L    F         HRD+ ++N +++ + T  +ADFGL+        Y
Sbjct: 152 FMVDIALGMEYLSNRNF--------LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203

Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
            Q      +P    V   ++++     ES+    + S  K+D++A G+ +WE        
Sbjct: 204 RQGRIAK-MP----V---KWIAI----ESLADRVYTS--KSDVWAFGVTMWE-------- 241

Query: 352 GIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVSDSTLNAMTKVMKE 406
            I      PY  +   +        +   +      ++P        +  L+ + ++M  
Sbjct: 242 -IATRGMTPYPGVQNHE--------MYDYLLHGHRLKQP--------EDCLDELYEIMYS 284

Query: 407 CWHQNANVRLSALRVKKTLIKL 428
           CW  +   R +   ++  L KL
Sbjct: 285 CWRTDPLDRPTFSVLRLQLEKL 306

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 97.9 bits (244), Expect = 2e-22
 Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 37/235 (15%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVW-RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR 188
            +++L   +   + +G G  G V  +G + G  VAVK            E ++ +     
Sbjct: 9   FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE-SDD 67

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD--------HLNRTTLNHHQMMKICL 240
           H N++ Y  S+ T R     L++     +  +L D          N      +  + +  
Sbjct: 68  HPNVIRYYCSETTDRF----LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLR 122

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIADFGL 287
            I +G+ HLH+          I HRD+K +NILV T             N   +I+DFGL
Sbjct: 123 QIASGVAHLHS-----LK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174

Query: 288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVL 341
                   +      N   GT  + +PE+L+ES N+       +  DI+++G V 
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 71/300 (23%)

Query: 136 KQISLSE-CIGKGRYGEVWRGVWHGEN----VAVKIFFSRDEASWS-------RETEIYS 183
           K ++L +  +G G +G V +G +  +     VAVKI   ++EA+          E  +  
Sbjct: 16  KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL--KNEANDPALKDELLAEANVMQ 73

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
              L +  I+  IG        C      LV      G L  +L     +    ++++  
Sbjct: 74  Q--LDNPYIVRMIGI-------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVH 124

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
            +  G+ +L    F         HRD+ ++N+L+ T     I+DFGL    S+     + 
Sbjct: 125 QVSMGMKYLEESNF--------VHRDLAARNVLLVTQHYAKISDFGL----SKALRADEN 172

Query: 301 PPNPRVGTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY 357
               +   K   ++ +P    E IN   F S  K+D+++ G+++WE          F   
Sbjct: 173 YYKAQTHGKWPVKWYAP----ECINYYKFSS--KSDVWSFGVLMWE---------AFSYG 217

Query: 358 KAPYHDLVPMDPSFDDMRKVI-CIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           + PY  +           +V   +++ +R   P           M  +M  CW  +   R
Sbjct: 218 QKPYRGM--------KGSEVTAMLEKGERMGCP-----AGCPREMYDLMNLCWTYDVENR 264

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 79/335 (23%), Positives = 125/335 (37%), Gaps = 97/335 (28%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIF---FSRDEASWSRETEIYSTV 185
           + I L   +G+G +G+V+    +  +       VAVK            + RE E+ +  
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN- 73

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----------------- 225
            L+HE+I+ + G        C     L +V  Y   G L   L                 
Sbjct: 74  -LQHEHIVKFYGV-------CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125

Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
            +  L   QM+ I   I +G+V+L ++ F         HRD+ ++N LV  N    I DF
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHF--------VHRDLATRNCLVGANLLVKIGDF 177

Query: 286 GLAVSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALG 338
           G++          D+      RVG       R+M P    ESI    F +  ++D+++ G
Sbjct: 178 GMS---------RDVYSTDYYRVGGHTMLPIRWMPP----ESIMYRKFTT--ESDVWSFG 222

Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSD 394
           ++LWE         IF   K P+           +   + CI Q    +RP         
Sbjct: 223 VILWE---------IFTYGKQPW-------FQLSNTEVIECITQGRVLERP--------R 258

Query: 395 STLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
                +  VM  CW +    RL+   + K L  L 
Sbjct: 259 VCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALG 293

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 98.6 bits (245), Expect = 3e-22
 Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 40/238 (16%)

Query: 123 GSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASW 175
           G G    +         + E +G G +G V R + H   GE VA+K        ++   W
Sbjct: 1   GGGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWI-HQDTGEQVAIKQCRQELSPKNRERW 59

Query: 176 SRETEIYSTVLLRHENI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----TT 229
             E +I     L H N+     +   +          L   Y   G L  +LN+      
Sbjct: 60  CLEIQIMK--KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG 117

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV---IADFG 286
           L    +  +   I + L +LH        +  I HRD+K +NI+++     +   I D G
Sbjct: 118 LKEGPIRTLLSDISSALRYLH--------ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169

Query: 287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWE 343
            A    Q            VGT +Y++PE+L++       + +    D ++ G + +E
Sbjct: 170 YAKELDQ-GELCT----EFVGTLQYLAPELLEQ-------KKYTVTVDYWSFGTLAFE 215

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 95.0 bits (237), Expect = 4e-22
 Identities = 52/331 (15%), Positives = 107/331 (32%), Gaps = 93/331 (28%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN---------VAVKIFFSRDEASWS------RETE 180
           + +  +E +G+G + ++++GV              V +K+    D+A  +          
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL---DKAHRNYSESFFEAAS 64

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--NRTTLNHHQM 235
           + S   L H++++   G        C       LV  +  FGSL  +L  N+  +N    
Sbjct: 65  MMSK--LSHKHLVLNYG-------VCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK 115

Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--------NGTCVIADFGL 287
           +++   +   +  L              H ++ +KNIL+               ++D G+
Sbjct: 116 LEVAKQLAAAMHFLEENTL--------IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167

Query: 288 A-VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           +     +   +  I          ++ PE +    N          D ++ G  LWE+C 
Sbjct: 168 SITVLPKDILQERI---------PWVPPECI---ENPKNLNL--ATDKWSFGTTLWEIC- 212

Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTK 402
            +           P         + D  RK+   +       P              +  
Sbjct: 213 -SGG-------DKPL-------SALDSQRKLQFYEDRHQLPAPKAAE----------LAN 247

Query: 403 VMKECWHQNANVRLSALRVKKTLIKLACADM 433
           ++  C     + R S   + + L  L   D+
Sbjct: 248 LINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 95.5 bits (238), Expect = 5e-22
 Identities = 71/335 (21%), Positives = 113/335 (33%), Gaps = 92/335 (27%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVK----IFFSRDEASWSRETEIYSTV 185
            I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S  
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK- 89

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------NRTTLNHHQ 234
              H+NI+  IG          Q    +++    + G L   L          ++L    
Sbjct: 90  -FNHQNIVRCIG-------VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 141

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLAVSY 291
           ++ +   I  G  +L    F         HRDI ++N L+   G      I DFG+A   
Sbjct: 142 LLHVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMA--- 190

Query: 292 SQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
                  DI      R G       ++M P    E+     F S  K D ++ G++LWE 
Sbjct: 191 ------RDIYRASYYRKGGCAMLPVKWMPP----EAFMEGIFTS--KTDTWSFGVLLWE- 237

Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAM 400
                   IF     PY       PS  +   +  +        P         +    +
Sbjct: 238 --------IFSLGYMPY-------PSKSNQEVLEFVTSGGRMDPP--------KNCPGPV 274

Query: 401 TKVMKECWHQNANVRLSALRVKKTLIKLACADMYI 435
            ++M +CW      R +   + + +         I
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 95.5 bits (237), Expect = 9e-22
 Identities = 36/284 (12%), Positives = 72/284 (25%), Gaps = 62/284 (21%)

Query: 136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRET----EIYSTVLLRH 189
           +++ L E +  G    V+        E+ A+K+F    E S S         ++   L  
Sbjct: 62  RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121

Query: 190 ENILGYIG----------------------SDMTSRNSCTQLWLVTHY-----HSFGSLY 222
           E+                            S      +     L+            S  
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 223 DHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC 280
           D +   R       +  +   ++    +L +     +G   + H      N+ +  +G  
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQS-----KG---LVHGHFTPDNLFIMPDGRL 233

Query: 281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGL 339
           ++ D                          Y   E L+  +            + + LGL
Sbjct: 234 MLGDVSALWKVGTRGPAS-------SVPVTYAPREFLNASTATFT-----HALNAWQLGL 281

Query: 340 VLWE-VCRRT----KANGIFEEYKAPY-HDLVPMDPSFDDMRKV 377
            ++   C          GI   +K P          +F     +
Sbjct: 282 SIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL 325

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 75/263 (28%)

Query: 119 TSGSGSGLPLLIQRTLAKQISLSE------------CIGKGRYGEVWRGVWH-GENVAVK 165
            S + +     +    + ++ L +             IG G +G+V++GV   G  VA+K
Sbjct: 10  NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69

Query: 166 IFFSRDEASWSRE--TEIYSTVLLRHENI---LGYIGSDMTSRNSCT---QLWLVTHYHS 217
              + + +    E  TEI +    RH ++   +G+          C    ++ L+  Y  
Sbjct: 70  RR-TPESSQGIEEFETEIETLSFCRHPHLVSLIGF----------CDERNEMILIYKYME 118

Query: 218 FGSLYDHLNRTTLNHHQM-----MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
            G+L  HL  + L    M     ++IC+    GL +LHT         AI HRD+KS NI
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--------RAIIHRDVKSINI 170

Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP-----RV-GTKRYMSPE-----ILDESI 321
           L+  N    I DFG++        K     +       V GT  Y+ PE      L E  
Sbjct: 171 LLDENFVPKITDFGIS--------KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTE-- 220

Query: 322 NMDCFESFKKADIYALGLVLWEV 344
                    K+D+Y+ G+VL+EV
Sbjct: 221 ---------KSDVYSFGVVLFEV 234

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 94.8 bits (236), Expect = 1e-21
 Identities = 70/336 (20%), Positives = 114/336 (33%), Gaps = 92/336 (27%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVK----IFFSRDEASWSRETEIYST 184
           K I+L   +G G +GEV+ G   G         VAVK    +   +DE  +  E  I S 
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 185 VLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------NRTTLNHH 233
               H+NI+  IG          Q    +++    + G L   L          ++L   
Sbjct: 131 --FNHQNIVRCIG-------VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLAVS 290
            ++ +   I  G  +L    F         HRDI ++N L+   G      I DFG+A  
Sbjct: 182 DLLHVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMA-- 231

Query: 291 YSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
                   DI      R G       ++M P    E+     F S  K D ++ G++LWE
Sbjct: 232 -------RDIYRAGYYRKGGCAMLPVKWMPP----EAFMEGIFTS--KTDTWSFGVLLWE 278

Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNA 399
           +   +           PY       PS  +   +  +        P         +    
Sbjct: 279 IF--SLG-------YMPY-------PSKSNQEVLEFVTSGGRMDPP--------KNCPGP 314

Query: 400 MTKVMKECWHQNANVRLSALRVKKTLIKLACADMYI 435
           + ++M +CW      R +   + + +         I
Sbjct: 315 VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 350

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 93.5 bits (233), Expect = 2e-21
 Identities = 66/310 (21%), Positives = 119/310 (38%), Gaps = 81/310 (26%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN----VAVKI----FFSRDEASWSRETEIYSTVLLR 188
            I   + IG+G +G+V +     +      A+K         D   ++ E E+    L  
Sbjct: 26  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGH 84

Query: 189 HENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-----------------NRT 228
           H NI+  +G+       C     L+L   Y   G+L D L                   +
Sbjct: 85  HPNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137

Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
           TL+  Q++     +  G+ +L  + F         HRD+ ++NILV  N    IADFGL+
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFGLS 189

Query: 289 VS---YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
                Y + +    +P    V   R+M+     ES+N   + +   +D+++ G++LWE+ 
Sbjct: 190 RGQEVYVKKTMGR-LP----V---RWMAI----ESLNYSVYTT--NSDVWSYGVLLWEIV 235

Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
             +           PY  +       +   K+     Q   L       +  + +  +M+
Sbjct: 236 --SLG-------GTPYCGM----TCAELYEKL----PQGYRLEK---PLNCDDEVYDLMR 275

Query: 406 ECWHQNANVR 415
           +CW +    R
Sbjct: 276 QCWREKPYER 285

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 93.5 bits (233), Expect = 2e-21
 Identities = 77/334 (23%), Positives = 123/334 (36%), Gaps = 96/334 (28%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIF---FSRDEASWSRETEIYSTV 185
           + I L   +G+G +G+V+    H          VAVK            + RE E+ +  
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM- 99

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----------------N 226
            L+H++I+ + G        CT+   L +V  Y   G L   L                 
Sbjct: 100 -LQHQHIVRFFGV-------CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151

Query: 227 RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG 286
              L   Q++ +   +  G+V+L    F         HRD+ ++N LV       I DFG
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFG 203

Query: 287 LAVSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALGL 339
           ++          DI      RVG +     R+M P    ESI    F +  ++D+++ G+
Sbjct: 204 MS---------RDIYSTDYYRVGGRTMLPIRWMPP----ESILYRKFTT--ESDVWSFGV 248

Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVSDS 395
           VLWE+   T         K P+           +   + CI Q    +RP         +
Sbjct: 249 VLWEIF--TYG-------KQPW-------YQLSNTEAIDCITQGRELERP--------RA 284

Query: 396 TLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
               +  +M+ CW +    R S   V   L  LA
Sbjct: 285 CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 93.4 bits (232), Expect = 3e-21
 Identities = 53/274 (19%), Positives = 88/274 (32%), Gaps = 85/274 (31%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGYI 196
           +C+G+G +G V+    +     N A+K     +      +       L  L H  I+ Y 
Sbjct: 12  QCMGRGGFGVVFE-AKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 70

Query: 197 GS--------------------------------------DMTSRNSCTQLWLVTHYHSF 218
            +                                       +   +  +    V      
Sbjct: 71  NAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPS 130

Query: 219 ---------------GSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
                           +L D +NR        H   + I + I   +  LH     ++G 
Sbjct: 131 SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH-----SKG- 184

Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP--------RVGTKRY 311
             + HRD+K  NI    +    + DFGL  +  Q   +  +            +VGTK Y
Sbjct: 185 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
           MSPE +    N        K DI++LGL+L+E+ 
Sbjct: 243 MSPEQI-HGNNYS-----HKVDIFSLGLILFELL 270

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 92/321 (28%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWS------RETEIY 182
             +   E +G+ R+G+V++G   G         VA+K    +D+A          E  + 
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLR 66

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-------------- 225
           +   L+H N++  +G         T+   L ++  Y S G L++ L              
Sbjct: 67  AR--LQHPNVVCLLGV-------VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117

Query: 226 ---NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI 282
               ++ L     + +   I  G+ +L +            H+D+ ++N+LV       I
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV--------VHKDLATRNVLVYDKLNVKI 169

Query: 283 ADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYA 336
           +D GL         Y  L N + +P    +   R+M+P    E+I    F     +DI++
Sbjct: 170 SDLGLFREVYAADYYKLLGNSL-LP----I---RWMAP----EAIMYGKFSI--DSDIWS 215

Query: 337 LGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDST 396
            G+VLWEV   +           PY        + D +  +   ++Q    P     D  
Sbjct: 216 YGVVLWEVF--SYG-------LQPYCGY----SNQDVVEMI--RNRQVLPCP-----DDC 255

Query: 397 LNAMTKVMKECWHQNANVRLS 417
              +  +M ECW++  + R  
Sbjct: 256 PAWVYALMIECWNEFPSRRPR 276

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 95.0 bits (236), Expect = 5e-21
 Identities = 62/289 (21%), Positives = 107/289 (37%), Gaps = 66/289 (22%)

Query: 144 IGKGRYGEVWRGVWHGEN----VAVKI----FFSRDEASWSRETEIYSTVLLRHENILGY 195
           +G G +G V +GV+        VA+K+        D     RE +I     L +  I+  
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ--LDNPYIVRL 401

Query: 196 IGSDMTSRNSCTQ--LWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
           IG        C    L LV      G L+  L   R  +    + ++   +  G+ +L  
Sbjct: 402 IGV-------CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE 454

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
           + F         HR++ ++N+L+       I+DFGL    S+     D     R   K  
Sbjct: 455 KNF--------VHRNLAARNVLLVNRHYAKISDFGL----SKALGADDSYYTARSAGKWP 502

Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            ++ +P    E IN   F S  ++D+++ G+ +WE              + PY  +    
Sbjct: 503 LKWYAP----ECINFRKFSS--RSDVWSYGVTMWE---------ALSYGQKPYKKM---- 543

Query: 369 PSFDDMRKVI-CIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
                  +V+  I+Q +R   P           +  +M +CW      R
Sbjct: 544 ----KGPEVMAFIEQGKRMECP-----PECPPELYALMSDCWIYKWEDR 583

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 91.5 bits (228), Expect = 7e-21
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 28/229 (12%)

Query: 125 GLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSR-E 178
           G  +     L+ +  L E +G G   EV          +VAVK+     +RD + + R  
Sbjct: 1   GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60

Query: 179 TEIYSTVLLRHENILG-Y-IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQM 235
            E  +   L H  I+  Y  G   T        ++V  Y    +L D ++    +   + 
Sbjct: 61  REAQNAAALNHPAIVAVYDTGEAETPAGPLP--YIVMEYVDGVTLRDIVHTEGPMTPKRA 118

Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
           +++       L   H       G   I HRD+K  NI++       + DFG+A + +   
Sbjct: 119 IEVIADACQALNFSHQ-----NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170

Query: 296 NKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWE 343
           N +       +GT +Y+SPE    +S++        ++D+Y+LG VL+E
Sbjct: 171 NSVTQ-TAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYE 211

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 92.8 bits (230), Expect = 1e-20
 Identities = 35/310 (11%), Positives = 80/310 (25%), Gaps = 54/310 (17%)

Query: 107 DSTLREYLDASLTSGSGSGLPLLIQRTLA---KQISLSECIGKGRYGEVWRGVWH--GEN 161
           +           TS   +G P  ++  L    + +     +G+              GE+
Sbjct: 46  EYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGES 105

Query: 162 VAVKIFFSRDEASWS------RETEIYSTV--------------------LLRHENILGY 195
             V + +  +    +       E      +                    L++       
Sbjct: 106 FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKM 165

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--------NRTTLNHHQMMKICLSIVNGLV 247
           I   +  R+         +     +L               +L HH  +++ L ++  L 
Sbjct: 166 IRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLA 225

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
            LH       G   + H  ++  +I++   G   +  F   V           P      
Sbjct: 226 SLH-----HYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVR---DGASAVSPIGRGFA 274

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRRT--KANGIFEEYKAPYHDL 364
                +  +L    +     +F   D + LGL ++   C       +      +  +   
Sbjct: 275 PPETTAERMLPFGQHHPTLMTF-AFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSC 333

Query: 365 VPMDPSFDDM 374
             +      +
Sbjct: 334 KNIPQPVRAL 343

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 63/335 (18%), Positives = 124/335 (37%), Gaps = 97/335 (28%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKI----FFSRDEASWSRETEIYSTV 185
           ++ L + +G+G +G+V      G +       VAVK+        +  +   E +I    
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH- 86

Query: 186 LLRHENILGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHL---------------- 225
           +  H N++  +G+       CT+    L ++  +  FG+L  +L                
Sbjct: 87  IGHHLNVVNLLGA-------CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139

Query: 226 -NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
             +  L    ++     +  G+  L         K    HRD+ ++NIL+       I D
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFL------ASRK--CIHRDLAARNILLSEKNVVKICD 191

Query: 285 FGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
           FGLA        Y +  +   +P    +   ++M+P    E+I    +    ++D+++ G
Sbjct: 192 FGLARDIYKDPDYVRKGDAR-LP----L---KWMAP----ETIFDRVYTI--QSDVWSFG 237

Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVS 393
           ++LWE+   +          +PY       P      +    + +    + P        
Sbjct: 238 VLLWEIF--SLG-------ASPY-------PGVKIDEEFCRRLKEGTRMRAP-------- 273

Query: 394 DSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           D T   M + M +CWH   + R +   + + L  L
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 102/325 (31%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWS------RETEIYS 183
           ++S  + +G G +G+V     +G         VAVK+   +  A  +       E ++ S
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKVLS 81

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------- 225
             L  H NI+  +G+       CT      ++T Y  +G L + L               
Sbjct: 82  Y-LGNHMNIVNLLGA-------CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133

Query: 226 ----NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV 281
               +   L+   ++     +  G+  L ++         I HRD+ ++NIL+       
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-------I-HRDLAARNILLTHGRITK 185

Query: 282 IADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIY 335
           I DFGLA       +Y    N   +P    V   ++M+P    ESI    +    ++D++
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNAR-LP----V---KWMAP----ESIFNCVYTF--ESDVW 231

Query: 336 ALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNR 390
           + G+ LWE+   +          +PY       P      K    I +      P     
Sbjct: 232 SYGIFLWELF--SLG-------SSPY-------PGMPVDSKFYKMIKEGFRMLSP----- 270

Query: 391 WVSDSTLNAMTKVMKECWHQNANVR 415
              +     M  +MK CW  +   R
Sbjct: 271 ---EHAPAEMYDIMKTCWDADPLKR 292

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 90.1 bits (223), Expect = 6e-20
 Identities = 37/287 (12%), Positives = 73/287 (25%), Gaps = 67/287 (23%)

Query: 101 RATAAGDSTLREYL---DASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVW 157
              +A DS +   L          S  G          + +     +G+           
Sbjct: 42  YMQSAADSLVSTSLWNTGQPFRVESELGER-------PRTLVRGTVLGQEDPYAYLEATD 94

Query: 158 H--GENVAVKIFFSRDEASWSRET----EIYSTVLLRHENILGYIGSDMTSRNSCTQLWL 211
              GE+  V + +  +    +       E+    LLR           +        +  
Sbjct: 95  QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154

Query: 212 VTH-----------------------------YHSFGSLYDHL-NRTTLNHHQMMKICLS 241
                                                 L  H     +L HH  +++ L 
Sbjct: 155 PQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 214

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           ++  L  LH       G   + H  ++  +I++   G   +  F   V            
Sbjct: 215 VIRLLASLH-----HYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSS--- 263

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFK-----KADIYALGLVLWE 343
                 ++ +  PE+      +      +       D +ALGLV++ 
Sbjct: 264 -----VSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 91.5 bits (227), Expect = 6e-20
 Identities = 50/260 (19%), Positives = 90/260 (34%), Gaps = 37/260 (14%)

Query: 127 PLLIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI-FFSRDEASWSR-ETEI 181
            L     +A Q  +  CI  G  G ++       +G  V +K    S D  + +    E 
Sbjct: 71  QLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAER 130

Query: 182 YSTVLLRHENILG-Y-IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC 239
                + H +I+  +      T R+     ++V  Y    SL     +  L   + +   
Sbjct: 131 QFLAEVVHPSIVQIFNFVEH-TDRHGDPVGYIVMEYVGGQSLKRSKGQK-LPVAEAIAYL 188

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
           L I+  L +LH+      G   + + D+K +NI++ T     + D G     +       
Sbjct: 189 LEILPALSYLHS-----IG---LVYNDLKPENIML-TEEQLKLIDLGAVSRINS------ 233

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRRTKANGIFEEYK 358
                  GT  + +PEI+               DIY +G  L          NG    Y 
Sbjct: 234 --FGYLYGTPGFQAPEIVRT-------GPTVATDIYTVGRTLAALTLDLPTRNG---RYV 281

Query: 359 APYHDLVPMDPSFDDMRKVI 378
               +  P+  ++D   +++
Sbjct: 282 DGLPEDDPVLKTYDSYGRLL 301

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 88.0 bits (219), Expect = 9e-20
 Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 49/216 (22%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFF------SRDEASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R       +A+K+ F      +  E    RE EI S   LRH NIL  
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS--HLRHPNILRL 74

Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHT 251
            GY           T+++L+  Y   G++Y  L + +  +  +       + N L + H+
Sbjct: 75  YGYFHDA-------TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----G 307
           +         + HRDIK +N+L+ + G   IADFG +V            P+ R     G
Sbjct: 128 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSRRTDLCG 169

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           T  Y+ PE+++           +K D+++LG++ +E
Sbjct: 170 TLDYLPPEMIEGR------MHDEKVDLWSLGVLCYE 199

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 65/322 (20%), Positives = 112/322 (34%), Gaps = 100/322 (31%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWS------RETEIYS 183
            +   + +G G +G+V      G         VAVK+   +  A          E +I S
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEALMSELKIMS 104

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------- 225
             L +HENI+  +G+       CT    + ++T Y  +G L + L               
Sbjct: 105 H-LGQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156

Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
             +T +   ++     +  G+  L ++         I HRD+ ++N+L+       I DF
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNC-------I-HRDVAARNVLLTNGHVAKIGDF 208

Query: 286 GLAVSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFKKADIYALG 338
           GLA          DI  +    V        ++M+P    ESI    +    ++D+++ G
Sbjct: 209 GLA---------RDIMNDSNYIVKGNARLPVKWMAP----ESIFDCVYTV--QSDVWSYG 253

Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QRPVLPNRWVS 393
           ++LWE         IF     PY       P      K    +       +P        
Sbjct: 254 ILLWE---------IFSLGLNPY-------PGILVNSKFYKLVKDGYQMAQP-------- 289

Query: 394 DSTLNAMTKVMKECWHQNANVR 415
                 +  +M+ CW      R
Sbjct: 290 AFAPKNIYSIMQACWALEPTHR 311

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 65/336 (19%), Positives = 136/336 (40%), Gaps = 97/336 (28%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN---------VAVKI----FFSRDEASWSRETEIY 182
            +++L + +G+G +G+V      G +         VAVK+       +D +    E E+ 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-------------- 225
              + +H+NI+  +G+       CTQ   L+++  Y S G+L ++L              
Sbjct: 95  KM-IGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146

Query: 226 ---NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI 282
                  +    ++     +  G+ +L ++           HRD+ ++N+LV  N    I
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVTENNVMKI 198

Query: 283 ADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYA 336
           ADFGLA        Y + +N   +P    V   ++M+P    E++    +    ++D+++
Sbjct: 199 ADFGLARDINNIDYYKKTTNGR-LP----V---KWMAP----EALFDRVYTH--QSDVWS 244

Query: 337 LGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWV 392
            G+++WE+   T          +PY       P          + +     +P       
Sbjct: 245 FGVLMWEIF--TLG-------GSPY-------PGIPVEELFKLLKEGHRMDKP------- 281

Query: 393 SDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
             +  N +  +M++CWH   + R +  ++ + L ++
Sbjct: 282 -ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 68/341 (19%), Positives = 122/341 (35%), Gaps = 102/341 (29%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWS------RETEIY 182
             I     IG+G +G V++    G         VAVK+   ++EAS        RE  + 
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALM 104

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-------------- 225
           +     + NI+  +G        C     + L+  Y ++G L + L              
Sbjct: 105 AE--FDNPNIVKLLGV-------CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155

Query: 226 -----------NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
                          L+  + + I   +  G+ +L    F         HRD+ ++N LV
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF--------VHRDLATRNCLV 207

Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFE 327
             N    IADFGL+          +I      +         R+M P    ESI  + + 
Sbjct: 208 GENMVVKIADFGLS---------RNIYSADYYKADGNDAIPIRWMPP----ESIFYNRYT 254

Query: 328 SFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVL 387
           +  ++D++A G+VLWE+   +           PY+ +       + +  V   D      
Sbjct: 255 T--ESDVWAYGVVLWEIF--SYG-------LQPYYGM----AHEEVIYYV--RDGNILAC 297

Query: 388 PNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           P     ++    +  +M+ CW +    R S   + + L ++
Sbjct: 298 P-----ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 87.8 bits (218), Expect = 3e-19
 Identities = 67/338 (19%), Positives = 139/338 (41%), Gaps = 101/338 (29%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN---------VAVKIFFSRDEASWS------RETE 180
            +++L + +G+G +G+V      G +         VAVK+   +D+A+         E E
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEME 138

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL------------ 225
           +    + +H+NI+  +G+       CTQ   L+++  Y S G+L ++L            
Sbjct: 139 MMKM-IGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190

Query: 226 -----NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC 280
                    +    ++     +  G+ +L ++         I HRD+ ++N+LV  N   
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-------I-HRDLAARNVLVTENNVM 242

Query: 281 VIADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
            IADFGLA        Y + +N   +P    V   ++M+P    E++    +    ++D+
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGR-LP----V---KWMAP----EALFDRVYTH--QSDV 288

Query: 335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNR 390
           ++ G+++WE+   T          +PY       P          + +     +P     
Sbjct: 289 WSFGVLMWEIF--TLG-------GSPY-------PGIPVEELFKLLKEGHRMDKP----- 327

Query: 391 WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
               +  N +  +M++CWH   + R +  ++ + L ++
Sbjct: 328 ---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 87.8 bits (218), Expect = 3e-19
 Identities = 66/338 (19%), Positives = 137/338 (40%), Gaps = 101/338 (29%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN---------VAVKIFFSRDEASWS------RETE 180
            ++ L + +G+G +G+V      G +         VAVK+   + +A+         E E
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEME 126

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL------------ 225
           +    + +H+NI+  +G+       CTQ   L+++  Y S G+L ++L            
Sbjct: 127 MMKM-IGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178

Query: 226 -----NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC 280
                    L+   ++     +  G+ +L ++           HRD+ ++N+LV  +   
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC--------IHRDLAARNVLVTEDNVM 230

Query: 281 VIADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
            IADFGLA        Y + +N   +P    V   ++M+P    E++    +    ++D+
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGR-LP----V---KWMAP----EALFDRIYTH--QSDV 276

Query: 335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNR 390
           ++ G++LWE+   T          +PY       P          + +     +P     
Sbjct: 277 WSFGVLLWEIF--TLG-------GSPY-------PGVPVEELFKLLKEGHRMDKP----- 315

Query: 391 WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
               +  N +  +M++CWH   + R +  ++ + L ++
Sbjct: 316 ---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 86.5 bits (215), Expect = 5e-19
 Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 58/223 (26%)

Query: 144 IGKGRYGEVWRGVWHGENVAVKIFFSRDEAS-------WSRETEIYSTVLLRHEN---IL 193
           +G+G +G V++G  +   VAVK   +  + +       + +E ++ +    +HEN   +L
Sbjct: 39  MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA--KCQHENLVELL 96

Query: 194 GYIGSDMTSRNSCT---QLWLVTHYHSFGSLYDHL----NRTTLNHHQMMKICLSIVNGL 246
           G+           +    L LV  Y   GSL D L        L+ H   KI     NG+
Sbjct: 97  GF----------SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VSYSQLSNKMDIP 301
             LH             HRDIKS NIL+    T  I+DFGLA      + + +++     
Sbjct: 147 NFLHEN--------HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTS----- 193

Query: 302 PNPRV-GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
              R+ GT  YM+PE L   I         K+DIY+ G+VL E
Sbjct: 194 ---RIVGTTAYMAPEALRGEIT-------PKSDIYSFGVVLLE 226

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 42/229 (18%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSR-ETEIY 182
           +I + + ++  + + +G G    V+          VA+K         E +  R E E++
Sbjct: 4   MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63

Query: 183 STVLLRHENILG-Y-IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKIC 239
           ++  L H+NI+    +  +          +LV  Y    +L +++     L+    +   
Sbjct: 64  NSSQLSHQNIVSMIDVDEEDDCY------YLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
             I++G+ H H           I HRDIK +NIL+ +N T  I DFG+A + S+ S    
Sbjct: 118 NQILDGIKHAHD-----MR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ- 168

Query: 300 IPPNPRVGTKRYMSPE-----ILDESINMDCFESFKKADIYALGLVLWE 343
              N  +GT +Y SPE       DE             DIY++G+VL+E
Sbjct: 169 --TNHVLGTVQYFSPEQAKGEATDE-----------CTDIYSIGIVLYE 204

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 85.7 bits (213), Expect = 5e-19
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 49/216 (22%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFF------SRDEASWSRETEIYSTVLLRHENIL-- 193
           +GKG++G V+  R   +   +A+K+ F         E    RE EI S   LRH NIL  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS--HLRHPNILRM 79

Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHT 251
             Y            +++L+  +   G LY  L +    +  +       + + L + H 
Sbjct: 80  YNYFHDR-------KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----G 307
                     + HRDIK +N+L+   G   IADFG +V            P+ R     G
Sbjct: 133 R--------KVIHRDIKPENLLMGYKGELKIADFGWSV----------HAPSLRRRTMCG 174

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           T  Y+ PE++ E    D     +K D++  G++ +E
Sbjct: 175 TLDYLPPEMI-EGKTHD-----EKVDLWCAGVLCYE 204

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 87.8 bits (218), Expect = 6e-19
 Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 39/215 (18%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHE 190
           ++   +GKG +GEV +        +  AVK+       ++D ++  RE E+     L H 
Sbjct: 25  NIVCMLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILREVELLKK--LDHP 81

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHL 249
           NI+        S +     ++V   ++ G L+D  + R   + H   +I   + +G+ ++
Sbjct: 82  NIMKLFEILEDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
           H           I HRD+K +NIL+++   +    I DFGL+  + Q + KM      R+
Sbjct: 138 HK-----HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKM----KDRI 184

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           GT  Y++PE+L  + +       +K D+++ G++L
Sbjct: 185 GTAYYIAPEVLRGTYD-------EKCDVWSAGVIL 212

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 87.8 bits (218), Expect = 6e-19
 Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 39/215 (18%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHE 190
              + +G G YGEV             A+KI       +   +    E  +     L H 
Sbjct: 40  QRVKKLGSGAYGEVLLCR-DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL--LDHP 96

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHL 249
           NI+         RN     +LV   +  G L+D + +R   N      I   +++G+ +L
Sbjct: 97  NIMKLYDFFEDKRN----YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
           H           I HRD+K +N+L+++   +    I DFGL+  +       +      +
Sbjct: 153 HK-----HN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-----L 199

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           GT  Y++PE+L +  +       +K D++++G++L
Sbjct: 200 GTAYYIAPEVLRKKYD-------EKCDVWSIGVIL 227

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 85.4 bits (212), Expect = 7e-19
 Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 37/213 (17%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENI 192
           +   +GKG +GEV +       +  AVK+       ++D ++  RE E+     L H NI
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK--LDHPNI 83

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHT 251
           +        S +     ++V   ++ G L+D  + R   + H   +I   + +G+ ++H 
Sbjct: 84  MKLFEILEDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
                     I HRD+K +NIL+++   +    I DFGL+  + Q +   D      +GT
Sbjct: 140 -----HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-----IGT 186

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L  + +       +K D+++ G++L
Sbjct: 187 AYYIAPEVLRGTYD-------EKCDVWSAGVIL 212

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 85.8 bits (213), Expect = 7e-19
 Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 35/218 (16%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF------------FSRDEASWSRETEIYST 184
             E +G+G    V R + H    +  AVKI                   +  +E +I   
Sbjct: 21  PKEILGRGVSSVVRRCI-HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 79

Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIV 243
            +  H NI+    +  T+       +LV      G L+D+L  + TL+  +  KI  +++
Sbjct: 80  -VSGHPNIIQLKDTYETNTF----FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
             +  LH           I HRD+K +NIL+  +    + DFG +          ++   
Sbjct: 135 EVICALHK-----LN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--- 183

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
              GT  Y++PEI++ S+N +     K+ D+++ G+++
Sbjct: 184 --CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 37/310 (11%), Positives = 97/310 (31%), Gaps = 49/310 (15%)

Query: 136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEASWSRETEIYSTVL-L 187
           K + +   +G+G + +V+             +   +K+    +   +   T++   +   
Sbjct: 65  KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPS 124

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT------TLNHHQMMKICLS 241
                + +  + +    S     LV   +S+G+L + +N         +    ++   + 
Sbjct: 125 MQHMFMKFYSAHLFQNGSV----LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-----------NGTCVIADFGLAVS 290
           ++  +  +H           I H DIK  N ++             +    + D G ++ 
Sbjct: 181 MLYMIEQVH--------DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID 232

Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
                         +  T  +   E+L             + D + +   ++ +   T  
Sbjct: 233 MKLFPKGTIF--TAKCETSGFQCVEMLSNK------PWNYQIDYFGVAATVYCMLFGTYM 284

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
               E  +     L    P  D   +         +         +L+ + + +K+ + Q
Sbjct: 285 KVKNEGGECKPEGLFRRLPHLDMWNEFF----HVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340

Query: 411 NANVRLSALR 420
           +   ++ ALR
Sbjct: 341 HYTNKIRALR 350

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 86.7 bits (215), Expect = 2e-18
 Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 50/226 (22%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKI----------------FFSRDEASWSRET 179
                +G G YGEV             A+K+                   +       E 
Sbjct: 39  FKVRKLGSGAYGEVLLCK-EKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97

Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKI 238
            +  +  L H NI+         +      +LVT ++  G L++ + NR   +      I
Sbjct: 98  SLLKS--LDHPNIIKLFDVFEDKKY----FYLVTEFYEGGELFEQIINRHKFDECDAANI 151

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLS 295
              I++G+ +LH           I HRDIK +NIL++         I DFGL+  +    
Sbjct: 152 MKQILSGICYLHK-----HN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---- 199

Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
              D     R+GT  Y++PE+L +  N       +K D+++ G+++
Sbjct: 200 -SKDYKLRDRLGTAYYIAPEVLKKKYN-------EKCDVWSCGVIM 237

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 63/331 (19%), Positives = 117/331 (35%), Gaps = 107/331 (32%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWS------RETEIY 182
           + +   + +G G +G+V     +G +       VAVK+   +++A  S       E ++ 
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKMM 102

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL-------------- 225
           +  L  HENI+  +G+       CT    ++L+  Y  +G L ++L              
Sbjct: 103 TQ-LGSHENIVNLLGA-------CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEY 154

Query: 226 ----------NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK 275
                     +   L    ++     +  G+  L              HRD+ ++N+LV 
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL------EFKS--CVHRDLAARNVLVT 206

Query: 276 TNGTCVIADFGLA------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
                 I DFGLA       +Y    N   +P    V   ++M+P    ES+    +   
Sbjct: 207 HGKVVKICDFGLARDIMSDSNYVVRGNAR-LP----V---KWMAP----ESLFEGIYTI- 253

Query: 330 KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI-CIDQ----QR 384
            K+D+++ G++LWE+   +           PY       P           I       +
Sbjct: 254 -KSDVWSYGILLWEIF--SLG-------VNPY-------PGIPVDANFYKLIQNGFKMDQ 296

Query: 385 PVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
           P              +  +M+ CW  ++  R
Sbjct: 297 P--------FYATEEIYIIMQSCWAFDSRKR 319

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 85.9 bits (213), Expect = 3e-18
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 40/216 (18%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF------FSRDEASWSRETEIYSTVLLRH 189
                +GKG +GEV         G+  AVK+          D+ S  RE ++     L H
Sbjct: 29  KGQRVLGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDH 85

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVH 248
            NI+                +LV   ++ G L+D + +R   +     +I   +++G+ +
Sbjct: 86  PNIMKLYEFFEDKGY----FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +H           I HRD+K +N+L+++   +    I DFGL+  +   S KM      +
Sbjct: 142 MHK-----NK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKM----KDK 188

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           +GT  Y++PE+L  + +       +K D+++ G++L
Sbjct: 189 IGTAYYIAPEVLHGTYD-------EKCDVWSTGVIL 217

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 84.7 bits (210), Expect = 3e-18
 Identities = 57/313 (18%), Positives = 114/313 (36%), Gaps = 63/313 (20%)

Query: 122 SGSGLPLLIQRTLAKQISLS-------ECIGKGRYGEVWRGVWH---GENVAVKIFFSRD 171
             SGL +L Q    K+ +++       + +G G  G+V     H   G+  A+K+    D
Sbjct: 8   HSSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECF-HRRTGQKCALKLL--YD 64

Query: 172 EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN 231
                +E + +        +I+  +       +    L ++      G L+  +      
Sbjct: 65  SPKARQEVDHHWQ-ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ 123

Query: 232 H---HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV---IADF 285
                +  +I   I   +  LH+          IAHRD+K +N+L  +        + DF
Sbjct: 124 AFTEREAAEIMRDIGTAIQFLHS-----HN---IAHRDVKPENLLYTSKEKDAVLKLTDF 175

Query: 286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL---- 341
           G A   +Q  N +  P      T  Y++PE+L      D     K  D+++LG+++    
Sbjct: 176 GFAKETTQ--NALQTP----CYTPYYVAPEVLGPE-KYD-----KSCDMWSLGVIMYILL 223

Query: 342 ------WEVCRRTKANGIFE-------EYKAPYHDLVPMDPSFDDMRKVICID-QQRP-- 385
                 +    +  + G+          +  P    V  + +   +R ++  D  +R   
Sbjct: 224 CGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS-EDAKQLIRLLLKTDPTERLTI 282

Query: 386 --VLPNRWVSDST 396
              + + W++ S 
Sbjct: 283 TQFMNHPWINQSM 295

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 83.8 bits (208), Expect = 4e-18
 Identities = 64/342 (18%), Positives = 120/342 (35%), Gaps = 106/342 (30%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKI----FFSRDEASWSRETEIYSTV 185
            + L + +G+G +G+V +              VAVK+        +      E  +    
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ- 82

Query: 186 LLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL----------------- 225
            + H +++   G+       C+Q   L L+  Y  +GSL   L                 
Sbjct: 83  -VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134

Query: 226 --------NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
                   +   L    ++     I  G+ +L       + K  + HRD+ ++NILV   
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYL------AEMK--LVHRDLAARNILVAEG 186

Query: 278 GTCVIADFGLAVSYSQLSNKMDIPPNP--RVGTK-----RYMSPEILDESINMDCFESFK 330
               I+DFGL+          D+         ++     ++M+     ES+    + +  
Sbjct: 187 RKMKISDFGLS---------RDVYEEDSYVKRSQGRIPVKWMAI----ESLFDHIYTT-- 231

Query: 331 KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPV 386
           ++D+++ G++LWE+   T           PY       P     R    +      +RP 
Sbjct: 232 QSDVWSFGVLLWEIV--TLG-------GNPY-------PGIPPERLFNLLKTGHRMERP- 274

Query: 387 LPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
                  D+    M ++M +CW Q  + R     + K L K+
Sbjct: 275 -------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 84.4 bits (209), Expect = 4e-18
 Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF-----------FSRDEASWSRETEIYSTV 185
             + IG+G    V R V H   G   AVKI                  +  RET I    
Sbjct: 98  PKDVIGRGVSSVVRRCV-HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ- 155

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
           +  H +I+  I S  +S      ++LV      G L+D+L  +  L+  +   I  S++ 
Sbjct: 156 VAGHPHIITLIDSYESSSF----MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
            +  LH           I HRD+K +NIL+  N    ++DFG +          ++    
Sbjct: 212 AVSFLHA-----NN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL---- 259

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             GT  Y++PEIL  S++       K+ D++A G++L
Sbjct: 260 -CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 31/210 (14%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
              + +G+G +    + V H    +  AVKI   R EA+  +E          H NI+  
Sbjct: 14  LKDKPLGEGSFSICRKCV-HKKSNQAFAVKIISKRMEANTQKEITALKL-CEGHPNIVKL 71

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
                   +     +LV    + G L++    +   +  +   I   +V+ + H+H    
Sbjct: 72  HEVFHDQLH----TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD--- 124

Query: 255 GTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
              G   + HRD+K +N+L      N    I DFG A      +  +  P      T  Y
Sbjct: 125 --VG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP----CFTLHY 175

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVL 341
            +PE+L+++   D     +  D+++LG++L
Sbjct: 176 AAPELLNQN-GYD-----ESCDLWSLGVIL 199

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 83.5 bits (207), Expect = 6e-18
 Identities = 68/321 (21%), Positives = 112/321 (34%), Gaps = 61/321 (19%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
           + E IG G Y    R + H       AVKI   + +   + E EI      +H NI+   
Sbjct: 26  VKEDIGVGSYSVCKRCI-HKATNMEFAVKII-DKSKRDPTEEIEILLR-YGQHPNIITLK 82

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                 +     +++VT     G L D  L +   +  +   +  +I   + +LH     
Sbjct: 83  DVYDDGKY----VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA---- 134

Query: 256 TQGKPAIAHRDIKSKNILVKT---NGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
            QG   + HRD+K  NIL      N   + I DFG A      +  +  P      T  +
Sbjct: 135 -QG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP----CYTANF 186

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVL----------WEVCRRTKANGIFE------ 355
           ++PE+L+     D        DI++LG++L                T    I        
Sbjct: 187 VAPEVLERQ-GYD-----AACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILARIGSGK 239

Query: 356 -EYKAPYHDLVPMDPSFDDMRKVICID-QQRP----VLPNRWVSD----STLNAMTKVMK 405
                 Y + V  D + D + K++ +D  QR     VL + W+             +   
Sbjct: 240 FSLSGGYWNSVS-DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298

Query: 406 ECWHQNANVRLSALRVKKTLI 426
                      SAL   ++ +
Sbjct: 299 HLVKGAMAATYSALNRNQSPV 319

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 83.6 bits (207), Expect = 6e-18
 Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 66/236 (27%)

Query: 144 IGKGRYGEVWRGVWHGENVAVKIFF--------------------SRDEASWSRETEIYS 183
           + +G++ ++       +  A+K +                           +  E +I +
Sbjct: 39  LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98

Query: 184 TVLLRHENIL---GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---------NRTTLN 231
              +++E  L   G I +         +++++  Y    S+                 + 
Sbjct: 99  --DIKNEYCLTCEGIITNY-------DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149

Query: 232 HHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY 291
              +  I  S++N   ++H        +  I HRD+K  NIL+  NG   ++DFG +   
Sbjct: 150 IQVIKCIIKSVLNSFSYIHN-------EKNICHRDVKPSNILMDKNGRVKLSDFGESE-- 200

Query: 292 SQLSNKMDIPPNPRV----GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
                      + ++    GT  +M PE      + +      K DI++LG+ L+ 
Sbjct: 201 --------YMVDKKIKGSRGTYEFMPPEFFSNESSYNG----AKVDIWSLGICLYV 244

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 38/214 (17%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF-----FSRDEASWSRETEIYSTVLLRHEN 191
           + E +GKG +  V R V H   G   A KI       +RD     RE  I     L+H N
Sbjct: 10  VKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARDFQKLEREARICR--KLQHPN 66

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
           I+    S           +LV    + G L++ +  R   +          I+  + + H
Sbjct: 67  IVRLHDSIQEESF----HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122

Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG 307
           +      G   I HR++K +N+L+  K  G  V +ADFGLA+  +              G
Sbjct: 123 S-----NG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AG 169

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           T  Y+SPE+L +          K  DI+A G++L
Sbjct: 170 TPGYLSPEVLKKDPYS------KPVDIWACGVIL 197

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 82.6 bits (204), Expect = 2e-17
 Identities = 56/256 (21%), Positives = 82/256 (32%), Gaps = 73/256 (28%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF--------FSRDEASWSRETEIYSTVLLR 188
           L   IG+G YG V   +         A+KI           +D      E  +     L 
Sbjct: 30  LKGAIGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK--KLH 86

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMM------------ 236
           H NI          +     + LV      G L D LN    +                 
Sbjct: 87  HPNIARLYEVYEDEQY----ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142

Query: 237 -----------------------------KICLSIVNGLVHLHTEIFGTQGKPAIAHRDI 267
                                         I   I + L +LH      QG   I HRDI
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-----QG---ICHRDI 194

Query: 268 KSKNILVKTNGTCV--IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
           K +N L  TN +    + DFGL+  + +L+N        + GT  +++PE+L    N   
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL----NTTN 250

Query: 326 FESFKKADIYALGLVL 341
                K D ++ G++L
Sbjct: 251 ESYGPKCDAWSAGVLL 266

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 66/331 (19%), Positives = 121/331 (36%), Gaps = 66/331 (19%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            S+ +G G  G+V +   +    E  A+K+   +D     RE E++     +  +I+  +
Sbjct: 66  TSQVLGLGINGKVLQIF-NKRTQEKFALKML--QDCPKARREVELHWR-ASQCPHIVRIV 121

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVHLHTEI 253
                       L +V      G L+  +           +  +I  SI   + +LH+  
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS-- 179

Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   IAHRD+K +N+L  +   N    + DFG A   +   N +  P      T  
Sbjct: 180 ---IN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPY 228

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVL----------WEVCRRTKANGIFE----- 355
           Y++PE+L      D     K  D+++LG+++          +       + G+       
Sbjct: 229 YVAPEVLGPE-KYD-----KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282

Query: 356 --EYKAPYHDLVPMDPSFDDMRKVICID-QQRP----VLPNRWVSDSTLNA--------M 400
             E+  P    V  +     +R ++  +  QR      + + W+  ST           +
Sbjct: 283 QYEFPNPEWSEVS-EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 341

Query: 401 TKVMKECWH---QNANVRLSALRVKKTLIKL 428
            K  KE W    +     L+ +RV    IK+
Sbjct: 342 LKEDKERWEDVKEEMTSALATMRVDYEQIKI 372

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 82.4 bits (204), Expect = 2e-17
 Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 40/241 (16%)

Query: 116 ASLTSGSGSGLPLLIQRTLAKQIS----LSECIGKGRYGEVWRGVWH--GENVAVKI--- 166
           AS+T G   G         + + S    + E +GKG +  V R V    G   A KI   
Sbjct: 5   ASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT 64

Query: 167 --FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH 224
               +RD     RE  I     L+H NI+    S           +LV    + G L++ 
Sbjct: 65  KKLSARDFQKLEREARICR--KLQHPNIVRLHDSIQEESF----HYLVFDLVTGGELFED 118

Query: 225 L-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV 281
           +  R   +          I+  + + H+      G   I HR++K +N+L+  K  G  V
Sbjct: 119 IVAREFYSEADASHCIQQILESIAYCHS-----NG---IVHRNLKPENLLLASKAKGAAV 170

Query: 282 -IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV 340
            +ADFGLA+  +  S       +   GT  Y+SPE+L +          K  DI+A G++
Sbjct: 171 KLADFGLAIEVND-SEAW----HGFAGTPGYLSPEVLKKDPYS------KPVDIWACGVI 219

Query: 341 L 341
           L
Sbjct: 220 L 220

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 81.1 bits (201), Expect = 3e-17
 Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 40/217 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSR-ETEIYSTVLLRHENIL 193
           L   +G+G  G+V+          VA+K+     S D    +R + E  +   L+  +++
Sbjct: 38  LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV 97

Query: 194 -----GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLV 247
                G I           QL++     +   L   L R   L   + + I   I + L 
Sbjct: 98  PIHDFGEIDG---------QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALD 148

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
             H       G     HRD+K +NILV  +    + DFG+A + +             VG
Sbjct: 149 AAHA-----AG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ---LGNTVG 197

Query: 308 TKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWE 343
           T  YM+PE   +            +ADIYAL  VL+E
Sbjct: 198 TLYYMAPERFSESHAT-------YRADIYALTCVLYE 227

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 37/212 (17%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILG 194
             E +G G + EV+       G+  A+K      +  ++S   E  +     ++HENI+ 
Sbjct: 13  FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK--IKHENIVT 70

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                 ++ +     +LV    S G L+D  L R          +   +++ + +LH   
Sbjct: 71  LEDIYESTTH----YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE-- 124

Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
               G   I HRD+K +N+L  T   N   +I DFGL+         M    +   GT  
Sbjct: 125 ---NG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN--GIM----STACGTPG 172

Query: 311 YMSPEILDESINMDCFESF-KKADIYALGLVL 341
           Y++PE+L +       + + K  D +++G++ 
Sbjct: 173 YVAPEVLAQ-------KPYSKAVDCWSIGVIT 197

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 82.0 bits (203), Expect = 4e-17
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 35/214 (16%)

Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIF-----FSRDEASWSRETEIYSTVLLRHEN 191
            L E +GKG +  V R V    G+  A  I       +RD     RE  I    LL+H N
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR--LLKHPN 71

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLH 250
           I+    S     +     +L+    + G L++  + R   +          I+  ++H H
Sbjct: 72  IVRLHDSISEEGH----HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
                  G   + HR++K +N+L+ +        +ADFGLA+                 G
Sbjct: 128 Q-----MG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW----FGFAG 175

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           T  Y+SPE+L +          K  D++A G++L
Sbjct: 176 TPGYLSPEVLRKDPYG------KPVDLWACGVIL 203

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 80.4 bits (199), Expect = 6e-17
 Identities = 49/213 (23%), Positives = 81/213 (38%), Gaps = 28/213 (13%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKI---FFSRDEASWSRETEIYSTVLLRHENILGY 195
           + +G+G +  V   + +    +  AVKI         +   RE E+       H N+L  
Sbjct: 19  DVLGEGAHARVQTCI-NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ-CQGHRNVLEL 76

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
           I             +LV      GS+  H   R   N  +   +   + + L  LH    
Sbjct: 77  IEFFEEEDR----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN--- 129

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPPNP---RVGT 308
             +G   IAHRD+K +NIL +         I DF L        +   I         G+
Sbjct: 130 --KG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             YM+PE+++           K+ D+++LG++L
Sbjct: 185 AEYMAPEVVEAFSEEASIYD-KRCDLWSLGVIL 216

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 35/211 (16%)

Query: 140 LSECIGKGRYGEVWRGV--WHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILG 194
           L   IG+G +GEV   V        A K     F  D   + +E EI     L H NI+ 
Sbjct: 13  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK--SLDHPNIIR 70

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
              +   + +    ++LV    + G L++  +++         +I   +++ + + H   
Sbjct: 71  LYETFEDNTD----IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK-- 124

Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   +AHRD+K +N L  T   +    + DFGLA  +      M      +VGT  
Sbjct: 125 ---LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP-GKMM----RTKVGTPY 173

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVL 341
           Y+SP++L+            + D ++ G+++
Sbjct: 174 YVSPQVLEGLYG-------PECDEWSAGVMM 197

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 54/220 (24%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFF------SRDEASWSRETEIYSTVLLRHENIL-- 193
           +GKG +  V+    +  G  VA+K+        +        E +I+    L+H +IL  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC--QLKHPSILEL 76

Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLH 250
             Y             ++LV      G +  +L       + ++       I+ G+++LH
Sbjct: 77  YNYFEDS-------NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV---G 307
           +          I HRD+   N+L+  N    IADFG       L+ ++ +P        G
Sbjct: 130 SH--------GILHRDLTLSNLLLTRNMNIKIADFG-------LATQLKMPHEKHYTLCG 174

Query: 308 TKRYMSPEILDESINMDCFESFK----KADIYALGLVLWE 343
           T  Y+SPEI                  ++D+++LG + + 
Sbjct: 175 TPNYISPEIATR----------SAHGLESDVWSLGCMFYT 204

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 43/217 (19%), Positives = 77/217 (35%), Gaps = 40/217 (18%)

Query: 139 SLSECIGKGRYGEVWRGV--WHGENVAVKIF----FSRDEASWSRETEIYSTVLLRHENI 192
                +G G +G+V        G    +K                E E+  +  L H NI
Sbjct: 25  IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS--LDHPNI 82

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHH----QMMKICLSIVNGLV 247
           +          N    +++V      G L +  ++            + ++   ++N L 
Sbjct: 83  IKIFEVFEDYHN----MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           + H+     Q    + H+D+K +NIL +    +    I DFGLA  +             
Sbjct: 139 YFHS-----QH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHS----TN 185

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             GT  YM+PE+    +         K DI++ G+V+
Sbjct: 186 AAGTALYMAPEVFKRDVT-------FKCDIWSAGVVM 215

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 44/221 (19%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF-----------FSRDEASWSRETEIYSTV 185
           +S+ +G G  GEV          + VA++I             +    +   E EI    
Sbjct: 139 MSKTLGSGACGEVKLAF-ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK-- 195

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
            L H  I+                ++V      G L+D +     L           ++ 
Sbjct: 196 KLNHPCIIKIKNFFDAE-----DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
            + +LH       G   I HRD+K +N+L+ +   +    I DFG +    + S    + 
Sbjct: 251 AVQYLHE-----NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL- 301

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVL 341
                GT  Y++PE+L           + +  D ++LG++L
Sbjct: 302 ----CGTPTYLAPEVLVSVGT----AGYNRAVDCWSLGVIL 334

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 77.4 bits (191), Expect = 9e-16
 Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 32/209 (15%)

Query: 140 LSECIGKGRYGEVWRGVW--HGENVAVKIFF-SRDEASWSRETEIYSTVLLRHENILGYI 196
           +   +G+G    V+R       +  A+K+   + D+     E  +     L H NI+   
Sbjct: 57  VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLR--LSHPNIIKLK 114

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
               T       + LV    + G L+D  + +   +          I+  + +LH     
Sbjct: 115 EIFETPTE----ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---- 166

Query: 256 TQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
             G   I HRD+K +N+L  T   +    IADFGL+           +      GT  Y 
Sbjct: 167 -NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV-----CGTPGYC 217

Query: 313 SPEILDESINMDCFESFKKADIYALGLVL 341
           +PEIL             + D++++G++ 
Sbjct: 218 APEILRGC-AYG-----PEVDMWSVGIIT 240

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 55/246 (22%), Positives = 93/246 (37%), Gaps = 45/246 (18%)

Query: 116 ASLTSGSGSGLPLLIQRTLAKQI-SLSECIGKGRYGEVWRGVWH---GENVAVKI----- 166
             ++ G G  L +     L + +  L E IGKG +  V R + +   G+  AVKI     
Sbjct: 3   PGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCI-NRETGQQFAVKIVDVAK 61

Query: 167 FFSRDEASWS---RETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD 223
           F S    S     RE  I    +L+H +I+  + +  +       L++V  +     L  
Sbjct: 62  FTSSPGLSTEDLKREASICH--MLKHPHIVELLETYSSDGM----LYMVFEFMDGADLCF 115

Query: 224 HL-----NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KT 276
            +          +          I+  L + H           I HRD+K   +L+  K 
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHD-----NN---IIHRDVKPHCVLLASKE 167

Query: 277 NGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIY 335
           N   V +  FG+A+   +           RVGT  +M+PE++            K  D++
Sbjct: 168 NSAPVKLGGFGVAIQLGESGLVA----GGRVGTPHFMAPEVVKREPYG------KPVDVW 217

Query: 336 ALGLVL 341
             G++L
Sbjct: 218 GCGVIL 223

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 46/220 (20%), Positives = 79/220 (35%), Gaps = 42/220 (19%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF-----------FSRDEASWSRETEIYSTV 185
           +S+ +G G  GEV          + VA+KI             +    +   E EI    
Sbjct: 14  MSKTLGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK-- 70

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
            L H  I+                ++V      G L+D +     L           ++ 
Sbjct: 71  KLNHPCIIKIKNFFDA-----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
            + +LH       G   I HRD+K +N+L+ +   +    I DFG +    + S    + 
Sbjct: 126 AVQYLHE-----NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL- 176

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
                GT  Y++PE+L            +  D ++LG++L
Sbjct: 177 ----CGTPTYLAPEVLVSVGTA---GYNRAVDCWSLGVIL 209

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 45/215 (20%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFF------SRDEASWSRETEIYSTVLLRHENIL-- 193
           +GKG + + +        E  A KI               S E  I+    L H++++  
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR--SLAHQHVVGF 106

Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
            G+   +         +++V       SL +    R  L   +       IV G  +LH 
Sbjct: 107 HGFFEDN-------DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV---GT 308
                     + HRD+K  N+ +  +    I DFG       L+ K++     +    GT
Sbjct: 160 N--------RVIHRDLKLGNLFLNEDLEVKIGDFG-------LATKVEYDGERKKVLCGT 204

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
             Y++PE+L +           + D++++G +++ 
Sbjct: 205 PNYIAPEVLSKK-GHSF-----EVDVWSIGCIMYT 233

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 38/214 (17%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIFFSR---DEASWSRETEIYSTVLLRHENI 192
            + E +G G +G V R V     G     K   +    D+ +   E  I +   L H  +
Sbjct: 54  DILEELGSGAFGVVHRCV-EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ--LHHPKL 110

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLH 250
           +    +          + L+  + S G L+D +      ++  +++        GL H+H
Sbjct: 111 INLHDAFEDKYE----MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166

Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
                      I H DIK +NI+   K   +  I DFGLA   +               T
Sbjct: 167 E-----HS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT-----TAT 213

Query: 309 KRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
             + +PEI+D E +           D++A+G++ 
Sbjct: 214 AEFAAPEIVDREPVG-------FYTDMWAIGVLG 240

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 77.2 bits (190), Expect = 3e-15
 Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 38/214 (17%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIFFSR---DEASWSRETEIYSTVLLRHENI 192
            + E +G G +G V R       G N A K   +    D+ +  +E +  S   LRH  +
Sbjct: 160 DIHEELGTGAFGVVHRVT-ERATGNNFAAKFVMTPHESDKETVRKEIQTMSV--LRHPTL 216

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLH 250
           +    +          + ++  + S G L++ +      ++  + ++    +  GL H+H
Sbjct: 217 VNLHDAFEDDNE----MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI--ADFGLAVSYSQLSNKMDIPPNPRVGT 308
                        H D+K +NI+  T  +  +   DFGL          + +      GT
Sbjct: 273 E-----NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKV----TTGT 319

Query: 309 KRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
             + +PE+ + + +           D++++G++ 
Sbjct: 320 AEFAAPEVAEGKPVG-------YYTDMWSVGVLS 346

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 28/191 (14%)

Query: 142 ECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASW----SRETEIYSTVL--LRHENI 192
             IG+G +GEV++      G+ VA+K +    ++  +     RE +I    L  L+HEN+
Sbjct: 23  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI----LQLLKHENV 78

Query: 193 ---LGYIGSDMTSRNSC-TQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
              +    +  +  N C   ++LV  +  H    L  ++        ++ ++   ++NGL
Sbjct: 79  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGL 137

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            ++H           I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV
Sbjct: 138 YYIHRN--------KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 189

Query: 307 GTKRYMSPEIL 317
            T  Y  PE+L
Sbjct: 190 VTLWYRPPELL 200

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 75.5 bits (186), Expect = 3e-15
 Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 47/221 (21%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKI---------FFSRDEASWSRETEIYSTVLL 187
               +G G +G VW  V      + V VK           +  D        EI     +
Sbjct: 28  TMSPLGSGAFGFVWTAV-DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86

Query: 188 RHENI---LGYIGSDMTSRNSCTQLWLVTHYHSFGS-LYDHL-NRTTLNHHQMMKICLSI 242
            H NI   L    +            LV   H  G  L+  +     L+      I   +
Sbjct: 87  EHANIIKVLDIFENQ-------GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
           V+ + +L  +         I HRDIK +NI++  + T  + DFG A +Y +         
Sbjct: 140 VSAVGYLRLK--------DIIHRDIKDENIVIAEDFTIKLIDFGSA-AYLERGKLFYTF- 189

Query: 303 NPRVGTKRYMSPEILDESINMDCFESF--KKADIYALGLVL 341
               GT  Y +PE+L           +   + ++++LG+ L
Sbjct: 190 ---CGTIEYCAPEVLMG-------NPYRGPELEMWSLGVTL 220

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 38/212 (17%)

Query: 138 ISLSECIGKGRYGEVWRGVWH---GENVAVKIFFSR---DEASWSRETEIYSTVLLRHEN 191
           +S +E +G GR+G+V +       G  +A KI  +R   D+     E  + +   L H N
Sbjct: 91  VSKTEILGGGRFGQVHKCE-ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ--LDHAN 147

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHL 249
           ++    +  +  +    + LV  Y   G L+D +      L     +     I  G+ H+
Sbjct: 148 LIQLYDAFESKND----IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           H           I H D+K +NIL   +      I DFGLA  Y     K+ +      G
Sbjct: 204 HQ-----MY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP-REKLKV----NFG 250

Query: 308 TKRYMSPEILD-ESINMDCFESFKKADIYALG 338
           T  +++PE+++ + ++          D++++G
Sbjct: 251 TPEFLAPEVVNYDFVS-------FPTDMWSVG 275

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 46/213 (21%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILG- 194
           IGKG + +V     H   G  VA+KI               RE  I    +L H NI+  
Sbjct: 23  IGKGNFAKVKLAR-HILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK--ILNHPNIVKL 79

Query: 195 Y--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
           +  I ++         L+L+  Y S G ++D+L     +   +       IV+ + + H 
Sbjct: 80  FEVIETE-------KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH- 131

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGT 308
                  +  I HRD+K++N+L+  +    IADFG        SN+            G 
Sbjct: 132 -------QKRIVHRDLKAENLLLDADMNIKIADFG-------FSNEFT-VGGKLDAFCGA 176

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y +PE+         ++   + D+++LG++L
Sbjct: 177 PPYAAPEL----FQGKKYDG-PEVDVWSLGVIL 204

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 73.8 bits (182), Expect = 8e-15
 Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 45/213 (21%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFF------SRDEASWSRETEIYSTVLLRHENIL-- 193
           +GKG + + +        E  A KI               S E  I+    L H++++  
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR--SLAHQHVVGF 80

Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
            G+   +         +++V       SL +    R  L   +       IV G  +LH 
Sbjct: 81  HGFFEDN-------DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV---GT 308
                     + HRD+K  N+ +  +    I DFG       L+ K++     +    GT
Sbjct: 134 N--------RVIHRDLKLGNLFLNEDLEVKIGDFG-------LATKVEYDGERKKVLCGT 178

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
             Y++PE+L +           + D++++G ++
Sbjct: 179 PNYIAPEVLSKK-GHSF-----EVDVWSIGCIM 205

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 35/212 (16%)

Query: 139 SLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR--DEASWSRETEIYSTVLLRHENILG 194
            ++E +G+G +G V R V     +    K    +  D+    +E  I +  + RH NIL 
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN--IARHRNILH 65

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTE 252
              S  +       L ++  + S   +++ +  +   LN  +++     +   L  LH+ 
Sbjct: 66  LHESFESMEE----LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS- 120

Query: 253 IFGTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                    I H DI+ +NI+   + + T  I +FG A       N   +          
Sbjct: 121 ----HN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL-----FTAPE 168

Query: 311 YMSPEILD-ESINMDCFESFKKADIYALGLVL 341
           Y +PE+   + ++          D+++LG ++
Sbjct: 169 YYAPEVHQHDVVS-------TATDMWSLGTLV 193

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 45/221 (20%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKI---------FFSRDEASWSRETEIYSTVL 186
              E +G G++  V +       G   A K                    RE  I     
Sbjct: 14  DTGEELGSGQFAVVKKCR-EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK--E 70

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
           ++H N++          +    + L+    + G L+D L  + +L   +  +    I+NG
Sbjct: 71  IQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQLSNKMDIP 301
           + +LH+          IAH D+K +NI++           I DFGLA      +   +I 
Sbjct: 127 VYYLHS-----LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI- 177

Query: 302 PNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
                GT  +++PEI++ E +         +AD++++G++ 
Sbjct: 178 ----FGTPEFVAPEIVNYEPLG-------LEADMWSIGVIT 207

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 45/221 (20%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF---------FSRDEASWSRETEIYSTVL 186
            + E +G G++  V +       G+  A K                    RE  I     
Sbjct: 8   EMGEELGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR--E 64

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
           +RH NI+          +    + L+    S G L+D L  + +L   +  +    I++G
Sbjct: 65  IRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQLSNKMDIP 301
           + +LH+     +    IAH D+K +NI++      N    + DFG+A      +   +I 
Sbjct: 121 VHYLHS-----KR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI- 171

Query: 302 PNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
                GT  +++PEI++ E +         +AD++++G++ 
Sbjct: 172 ----FGTPEFVAPEIVNYEPLG-------LEADMWSIGVIT 201

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)

Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRE---TEIYSTVLLR 188
            + E +G G++  V +       G   A K              SRE    E+     + 
Sbjct: 15  DIGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
           H N++          +    + L+    S G L+D L  + +L+  +       I++G+ 
Sbjct: 74  HHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQLSNKMDIPPN 303
           +LHT     +    IAH D+K +NI++           + DFGLA          +I   
Sbjct: 130 YLHT-----KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI--- 178

Query: 304 PRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
              GT  +++PEI++ E +         +AD++++G++ 
Sbjct: 179 --FGTPEFVAPEIVNYEPLG-------LEADMWSIGVIT 208

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 37/214 (17%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           +G+G YG+V   +         AVKI       R     +  + EI     LRH+N++  
Sbjct: 13  LGEGSYGKVKEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGS--LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           +  D+       ++++V  Y   G   + D +        Q       +++GL +LH+  
Sbjct: 72  V--DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS-- 127

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV-----GT 308
              QG   I H+DIK  N+L+ T GT  I+  G       ++  +             G+
Sbjct: 128 ---QG---IVHKDIKPGNLLLTTGGTLKISALG-------VAEALHPFAADDTCRTSQGS 174

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
             +  PEI +       F    K DI++ G+ L+
Sbjct: 175 PAFQPPEIANGLDTFSGF----KVDIWSAGVTLY 204

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 72.4 bits (178), Expect = 3e-14
 Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 45/235 (19%)

Query: 125 GLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH---GENVAVKIF---------FSRDE 172
           G+    Q+ +     + E +G G++  V +       G   A K                
Sbjct: 1   GMETFKQQKVEDFYDIGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVCR 59

Query: 173 ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLN 231
               RE  I     + H NI+          +    + L+    S G L+D L  + +L+
Sbjct: 60  EEIEREVSILR--QVLHPNIITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLS 113

Query: 232 HHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGL 287
             +       I++G+ +LHT     +    IAH D+K +NI++           + DFGL
Sbjct: 114 EEEATSFIKQILDGVNYLHT-----KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165

Query: 288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
           A          +I      GT  +++PEI++ E +         +AD++++G++ 
Sbjct: 166 AHEIEDGVEFKNI-----FGTPEFVAPEIVNYEPLG-------LEADMWSIGVIT 208

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 30/186 (16%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
             IG+G YG V++      G+ VA+K F   ++    ++    EI     L+H N++  +
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68

Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
             ++  R    +L LV  Y  H+     D   R  +  H +  I    +  +   H    
Sbjct: 69  --EVFRRKR--RLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCH---- 119

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
               K    HRD+K +NIL+  +    + DFG A   +        P +     V T+ Y
Sbjct: 120 ----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT-------GPSDYYDDEVATRWY 168

Query: 312 MSPEIL 317
            SPE+L
Sbjct: 169 RSPELL 174

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 40/211 (18%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +G+G YGEV   V +    E VAVKI           +  +E  I    +L HEN++ + 
Sbjct: 15  LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINK--MLNHENVVKFY 71

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           G            +L   Y S G L+D +     +      +    ++ G+V+LH     
Sbjct: 72  GH-RREG---NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--- 124

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRDIK +N+L+       I+DFGLA  +    N  +   N   GT  Y++PE
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPE 177

Query: 316 ILDESINMDCFESFK-----KADIYALGLVL 341
           +L            +       D+++ G+VL
Sbjct: 178 LL----------KRREFHAEPVDVWSCGIVL 198

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 71.5 bits (175), Expect = 2e-13
 Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 45/216 (20%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           IG+G +GEV+  R    G+  A+K         +   + +   E           +L  +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-NE---------RIMLSLV 246

Query: 197 GSD----MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLV 247
            +     +   +        L  +    + G L+ HL++  +     M+   + I+ GL 
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           H+H           + +RD+K  NIL+  +G   I+D GLA  +          P+  VG
Sbjct: 307 HMHNR--------FVVYRDLKPANILLDEHGHVRISDLGLACDF------SKKKPHASVG 352

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           T  YM+PE+L + +  D       AD ++LG +L++
Sbjct: 353 THGYMAPEVLQKGVAYD-----SSADWFSLGCMLFK 383

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 30/184 (16%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
           +G+G YG V +      G  VA+K F   D+    ++    EI     LRHEN++  +  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL-- 90

Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           ++  +    + +LV  +  H+     +      L++  + K    I+NG+   H      
Sbjct: 91  EVCKKKK--RWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCH------ 141

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRYMS 313
                I HRDIK +NILV  +G   + DFG A + +        P       V T+ Y +
Sbjct: 142 --SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA-------APGEVYDDEVATRWYRA 192

Query: 314 PEIL 317
           PE+L
Sbjct: 193 PELL 196

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 41/217 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHEN 191
            S+ +G+G++  V + +     G+  A K            A    E  +          
Sbjct: 33  TSKELGRGKFAVVRQCI-SKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLEL-AKSCPR 90

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVH 248
           ++        +      + L+  Y + G ++          ++ + ++++   I+ G+ +
Sbjct: 91  VINLHEVYENTSE----IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           LH           I H D+K +NIL+ +    G   I DFG++          +I     
Sbjct: 147 LHQ-----NN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI----- 193

Query: 306 VGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVL 341
           +GT  Y++PEIL+ + I           D++ +G++ 
Sbjct: 194 MGTPEYLAPEILNYDPIT-------TATDMWNIGIIA 223

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 48/228 (21%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF----------FSRDEASWSRETEIYSTV----- 185
           IGKG YG V     +       A+K+           F R              +     
Sbjct: 21  IGKGSYGVVKLAY-NENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGP 79

Query: 186 ------------LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH 233
                        L H N++  +  ++    +   L++V    + G + +      L+  
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLV--EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
           Q       ++ G+ +LH      Q    I HRDIK  N+LV  +G   IADFG+    S 
Sbjct: 138 QARFYFQDLIKGIEYLHY-----QK---IIHRDIKPSNLLVGEDGHIKIADFGV----SN 185

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
                D   +  VGT  +M+PE L  S     F   K  D++A+G+ L
Sbjct: 186 EFKGSDALLSNTVGTPAFMAPESL--SETRKIFSG-KALDVWAMGVTL 230

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 68.9 bits (169), Expect = 4e-13
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 40/211 (18%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +G+G YGEV   V +    E VAVKI           +  +E  I    +L HEN++ + 
Sbjct: 15  LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINK--MLNHENVVKFY 71

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           G            +L   Y S G L+D +     +      +    ++ G+V+LH     
Sbjct: 72  GH-RREG---NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--- 124

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRDIK +N+L+       I+DFGLA  +    N  +   N   GT  Y++PE
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPE 177

Query: 316 ILDESINMDCFESFK-----KADIYALGLVL 341
           +L            +       D+++ G+VL
Sbjct: 178 LL----------KRREFHAEPVDVWSCGIVL 198

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 68.9 bits (169), Expect = 6e-13
 Identities = 58/225 (25%), Positives = 86/225 (38%), Gaps = 41/225 (18%)

Query: 142 ECIGKGRYGEVWRGV-WHGENVAVK-IFFSRDEASWSR--ETEIYSTVLLR--------- 188
             I  G YG V  GV   G  VA+K +F +  +               +LR         
Sbjct: 28  RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87

Query: 189 HENILGYIGSDM---TSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIV 243
           H NILG    D+       +  +L+LVT       L    H  R  ++   +      I+
Sbjct: 88  HPNILGLR--DIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHIL 144

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
            GL  LH           + HRD+   NIL+  N    I DF LA   +  +NK      
Sbjct: 145 LGLHVLHEA--------GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH---- 192

Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRR 347
             V  + Y +PE+      +  F+ F K  D+++ G V+ E+  R
Sbjct: 193 -YVTHRWYRAPEL------VMQFKGFTKLVDMWSAGCVMAEMFNR 230

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 68.0 bits (167), Expect = 7e-13
 Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 31/190 (16%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK--IFFSRDEASWS------RETEIYSTV-LLRHENI 192
           IG G YG V++      G  VA+K     +             RE  +   +    H N+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 193 LGYIGSDMTSRNSC-TQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           +  +    TSR     ++ LV  +      +  D      L    +  +    + GL  L
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN--PRVG 307
           H           I HRD+K +NILV + GT  +ADFGLA  YS             P V 
Sbjct: 137 HAN--------CIVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALTPVVV 181

Query: 308 TKRYMSPEIL 317
           T  Y +PE+L
Sbjct: 182 TLWYRAPEVL 191

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 68.0 bits (165), Expect = 9e-13
 Identities = 30/199 (15%), Positives = 54/199 (27%), Gaps = 51/199 (25%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASW-----SRETEIYSTVLL---- 187
           ++   E IG+G +GEV++ +     VA+KI                  EI   +++    
Sbjct: 21  KLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKEL 80

Query: 188 ---------RHENILGYIG--------------------------SDMTSRNSCTQLWLV 212
                    R E  +G                             +D        QL++V
Sbjct: 81  SLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIV 140

Query: 213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
             +   G   + +     +      I   +   L                 HRD+   N+
Sbjct: 141 LEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA-------SLRFEHRDLHWGNV 193

Query: 273 LVKTNGTCVIADFGLAVSY 291
           L+K      +       S 
Sbjct: 194 LLKKTSLKKLHYTLNGKSS 212

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGY---IG 197
           IG G +G     R     E VAVK    R  A     + EI +   LRH NI+ +   I 
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYI-ERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
           +        T L ++  Y S G LY+ + N    +  +       +++G+ + H      
Sbjct: 87  TP-------THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH------ 133

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCV--IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                I HRD+K +N L+  +      I DFG + S           P   VGT  Y++P
Sbjct: 134 --SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-----HSQPKSTVGTPAYIAP 186

Query: 315 EILDESINMDCFESFKKADIYALGLVL 341
           E+L      D     K AD+++ G+ L
Sbjct: 187 EVL-LRQEYDG----KIADVWSCGVTL 208

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 57/223 (25%), Positives = 86/223 (38%), Gaps = 60/223 (26%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +GEV   +    G+  A K         R   + +   E         + IL  +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL-NE---------KQILEKV 241

Query: 197 GSD-MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS---------- 241
            S  + S     +    L LV    + G L  H+       + M +              
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI-------YHMGQAGFPEARAVFYAAE 294

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I  GL  LH E         I +RD+K +NIL+  +G   I+D GLAV   +        
Sbjct: 295 ICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-----GQT 341

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
              RVGT  YM+PE++         E +  + D +ALG +L+E
Sbjct: 342 IKGRVGTVGYMAPEVVKN-------ERYTFSPDWWALGCLLYE 377

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 54/219 (24%), Positives = 80/219 (36%), Gaps = 44/219 (20%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           IG+G + EV   +    G+  A+KI        R E S  R E ++          I   
Sbjct: 69  IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG--DRRWITQL 126

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS----------IVNG 245
             +          L+LV  Y+  G L   L++            +           IV  
Sbjct: 127 HFAFQDENY----LYLVMEYYVGGDLLTLLSK--------FGERIPAEMARFYLAEIVMA 174

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           +  +H        +    HRDIK  NIL+   G   +ADFG  +   +L     +     
Sbjct: 175 IDSVH--------RLGYVHRDIKPDNILLDRCGHIRLADFGSCL---KLRADGTVRSLVA 223

Query: 306 VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           VGT  Y+SPEIL          S+    D +ALG+  +E
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE 262

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 66.8 bits (164), Expect = 2e-12
 Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 41/190 (21%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETE-IYSTVL--------LRHENI 192
           IG+G YG V++      GE VA+K      +     ETE + ST +        L H NI
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALK------KIRLDTETEGVPSTAIREISLLKELNHPNI 64

Query: 193 LGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           +  +  D+    +  +L+LV  +         D    T +    +      ++ GL   H
Sbjct: 65  VKLL--DVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVG 307
           +          + HRD+K +N+L+ T G   +ADFGLA ++        +P       V 
Sbjct: 121 SH--------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYTHEVV 165

Query: 308 TKRYMSPEIL 317
           T  Y +PEIL
Sbjct: 166 TLWYRAPEIL 175

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 29/191 (15%)

Query: 144 IGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
           +G+G YG V++         ++ A+K        S S   EI     L+H N++      
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSACREIALLRELKHPNVISLQ--K 85

Query: 200 MTSRNSCTQLWLVTHY---------HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           +   ++  ++WL+  Y             +   +     L    +  +   I++G+ +LH
Sbjct: 86  VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKT----NGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
                      + HRD+K  NILV       G   IAD G A  ++     +    +P V
Sbjct: 146 AN--------WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA-DLDPVV 196

Query: 307 GTKRYMSPEIL 317
            T  Y +PE+L
Sbjct: 197 VTFWYRAPELL 207

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 39/224 (17%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVK---IFFSRDEASWS-RETEIYSTVLLRHENILGY 195
             +G+G YG V        GE VA+K    F     A  + RE +I      +HENI+  
Sbjct: 17  SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILK--HFKHENIITI 74

Query: 196 IGSDM---TSRNSCTQLWLVTHYHSFGS-LYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
              ++    S  +  +++++       + L+  ++   L+   +       +  +  LH 
Sbjct: 75  F--NIQRPDSFENFNEVYIIQEL--MQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130

Query: 252 EIFGTQGKPA-IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----- 305
                    + + HRD+K  N+L+ +N    + DFGLA    + +     P   +     
Sbjct: 131 ---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181

Query: 306 -VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRR 347
            V T+ Y +PE+      M     + +A D+++ G +L E+  R
Sbjct: 182 FVATRWYRAPEV------MLTSAKYSRAMDVWSCGCILAELFLR 219

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 47/218 (21%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +G+G +GEV+  +    G+  A K         R     +   E         + IL  +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAM-VE---------KKILAKV 242

Query: 197 GSD-MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHH----QMMKICLS-IVNGL 246
            S  + S     +    L LV    + G +  H+     ++            + IV+GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            HLH           I +RD+K +N+L+  +G   I+D GLAV       K         
Sbjct: 303 EHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK----TKGYA 350

Query: 307 GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           GT  +M+PE+L         E +  + D +ALG+ L+E
Sbjct: 351 GTPGFMAPELLLG-------EEYDFSVDYFALGVTLYE 381

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 67.2 bits (164), Expect = 3e-12
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 32/213 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG-- 194
           IG G  G V          NVA+K     F ++  A  + RE  +     + H+NI+   
Sbjct: 70  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK--CVNHKNIISLL 127

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            + +   +      ++LV       +    + +  L+H +M  +   ++ G+ HLH+   
Sbjct: 128 NVFTPQKTLEEFQDVYLVMEL--MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-- 183

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRD+K  NI+VK++ T  I DFGLA +    S  M     P V T+ Y +P
Sbjct: 184 ------GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMM----TPYVVTRYYRAP 232

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           E+      +      +  DI+++G ++ E+ R 
Sbjct: 233 EV------ILGMGYKENVDIWSVGCIMGEMVRH 259

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 32/213 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG-- 194
           IG G  G V          NVA+K     F ++  A  + RE  +     + H+NI+G  
Sbjct: 33  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK--CVNHKNIIGLL 90

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            + +   S      +++V       +L   + +  L+H +M  +   ++ G+ HLH+   
Sbjct: 91  NVFTPQKSLEEFQDVYIVMELMDA-NLCQVI-QMELDHERMSYLLYQMLCGIKHLHSA-- 146

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRD+K  NI+VK++ T  I DFGLA +               V T+ Y +P
Sbjct: 147 ------GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP-----YVVTRYYRAP 195

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           E+      +      +  DI+++G ++ E+ + 
Sbjct: 196 EV------ILGMGYKENVDIWSVGCIMGEMIKG 222

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 66.2 bits (162), Expect = 4e-12
 Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 33/213 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG-- 194
           +G G YG V   +    GE VA+K     F S   A  + RE  +     ++HEN++G  
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK--HMQHENVIGLL 89

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            + +  +S  +    +LV  +    +    +     +  ++  +   ++ GL ++H+   
Sbjct: 90  DVFTPASSLRNFYDFYLVMPF--MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA-- 145

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + HRD+K  N+ V  +    I DFGLA        +M       V T+ Y +P
Sbjct: 146 ------GVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEM----TGYVVTRWYRAP 192

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           E++     +      +  DI+++G ++ E+   
Sbjct: 193 EVI-----LSWMHYNQTVDIWSVGCIMAEMLTG 220

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 24/212 (11%), Positives = 48/212 (22%), Gaps = 60/212 (28%)

Query: 140 LSECIGKGRYGEVWRGV--WHGENVAVKIF---FSRDEASWSR-ETEIYSTVLLRHENIL 193
           L    G     + W+ +       VA+          +       +       +    + 
Sbjct: 35  LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94

Query: 194 G-Y-IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
               +              +V  +   GSL +    T+ +    ++   S+       H 
Sbjct: 95  RVLDVVHTRA------GGLVVAEWIRGGSLQEVA-DTSPSPVGAIRAMQSLAAAADAAHR 147

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                 G   +A        + V  +G  V+A                   NP+      
Sbjct: 148 -----AG---VALSIDHPSRVRVSIDGDVVLAYPATMP-----------DANPQ------ 182

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
                                DI  +G  L+ 
Sbjct: 183 --------------------DDIRGIGASLYA 194

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 50/240 (20%), Positives = 82/240 (34%), Gaps = 50/240 (20%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWSRE-TEIYSTV 185
             R    +  +    G+G +G V  G     G +VA+K +       +  RE   +    
Sbjct: 17  RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN--RELQIMQDLA 74

Query: 186 LLRHENILG---YIGSDMTSRNSCTQLWLVTHY-----HSFGSLYDHLNRT-TLNH---- 232
           +L H NI+    Y  +          L +V  Y     H     Y               
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134

Query: 233 -HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVS 290
             Q+++        +  LH           + HRDIK  N+LV + +GT  + DFG A  
Sbjct: 135 LFQLIR-------SIGCLHLPSVN------VCHRDIKPHNVLVNEADGTLKLCDFGSA-- 179

Query: 291 YSQLSNKMDIPPNPRVG---TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
                 K   P  P V    ++ Y +PE++               DI+++G +  E+   
Sbjct: 180 ------KKLSPSEPNVAYICSRYYRAPELI-----FGNQHYTTAVDIWSVGCIFAEMMLG 228

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 65.9 bits (161), Expect = 7e-12
 Identities = 44/210 (20%), Positives = 90/210 (42%), Gaps = 31/210 (14%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           IG+G +GEV   R     +  A+K+        R ++++   E +I +        ++  
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA--NSPWVVQL 134

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIF 254
             +    R     L++V  Y   G L + ++   +      +   + +V  L  +H    
Sbjct: 135 FYAFQDDRY----LYMVMEYMPGGDLVNLMSNYDVPEK-WARFYTAEVVLALDAIH---- 185

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                    HRD+K  N+L+  +G   +ADFG  +   +++ +  +  +  VGT  Y+SP
Sbjct: 186 ----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISP 238

Query: 315 EILDESINMDCFESFKKA-DIYALGLVLWE 343
           E+L    +      + +  D +++G+ L+E
Sbjct: 239 EVLK---SQGGDGYYGRECDWWSVGVFLYE 265

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 65.9 bits (161), Expect = 7e-12
 Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 47/207 (22%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWSRETEIYSTVLL 187
            R      + ++ IG G +G V++      GE VA+K +   +D+   +RE +I     L
Sbjct: 49  DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMR--KL 104

Query: 188 RHENI--LGYIGSDMTSRNSCTQLWLVTHY-----HSFGSLYDHLNRT-TLNH-----HQ 234
            H NI  L Y       +     L LV  Y     +     Y    +T  + +     +Q
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164

Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGLAVSYSQ 293
           + +        L ++H+      G   I HRDIK +N+L+  +     + DFG A     
Sbjct: 165 LFR-------SLAYIHS-----FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA----- 204

Query: 294 LSNKMDIPPNPRVG---TKRYMSPEIL 317
              K  +   P V    ++ Y +PE++
Sbjct: 205 ---KQLVRGEPNVSYICSRYYRAPELI 228

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 65.4 bits (160), Expect = 8e-12
 Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 32/213 (15%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG-- 194
           +G G YG V   V    G  VA+K     F S   A  + RE  +     +RHEN++G  
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLK--HMRHENVIGLL 90

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            + +   + +  T  +LV  +     L   +    L   ++  +   ++ GL ++H    
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-- 147

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRD+K  N+ V  +    I DFGLA       ++M       V T+ Y +P
Sbjct: 148 ------GIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEM----TGYVVTRWYRAP 194

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           E++     ++     +  DI+++G ++ E+   
Sbjct: 195 EVI-----LNWMRYTQTVDIWSVGCIMAEMITG 222

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 64.9 bits (159), Expect = 8e-12
 Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 43/195 (22%)

Query: 144 IGKGRYGEVWRGV---WHGENVAVK-IFFSRDE----ASWSRETEIYSTVLLR------H 189
           IG+G YG+V++       G  VA+K +     E     S  RE       +LR      H
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA-----VLRHLETFEH 73

Query: 190 ENILGYIGSDM---TSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
            N++     D+   +  +  T+L LV  +      +  D +    +    +  +   ++ 
Sbjct: 74  PNVVRLF--DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN- 303
           GL  LH+          + HRD+K +NILV ++G   +ADFGLA  YS            
Sbjct: 132 GLDFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-------FQMAL 176

Query: 304 -PRVGTKRYMSPEIL 317
              V T  Y +PE+L
Sbjct: 177 TSVVVTLWYRAPEVL 191

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 65.0 bits (159), Expect = 9e-12
 Identities = 47/226 (20%), Positives = 80/226 (35%), Gaps = 41/226 (18%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK--IFFSRDEASWS-RETEIYSTVLLRHENILGYI 196
           + +G G  G V+  V     + VA+K  +         + RE +I     L H+NI+   
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIR--RLDHDNIVKVF 74

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLY--------D-----HLNRTTLNHHQMMKICLSIV 243
             ++   +       V       S+Y        D             H ++      ++
Sbjct: 75  --EILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL--FMYQLL 130

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV--IADFGLAVSYSQLSNKMDIP 301
            GL ++H+          + HRD+K  N+ + T    V  I DFGLA       +     
Sbjct: 131 RGLKYIHSA--------NVLHRDLKPANLFINTE-DLVLKIGDFGLARIMDPHYSHKGHL 181

Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
               + TK Y SP +L     +      K  D++A G +  E+   
Sbjct: 182 S-EGLVTKWYRSPRLL-----LSPNNYTKAIDMWAAGCIFAEMLTG 221

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 37/187 (19%)

Query: 144 IGKGRYGEVWRGVWH--GENVAVK-IFFSRDE---ASWSRETEIYSTVL--LRHENILGY 195
           +G+G Y  V++G        VA+K I    +E    +  RE  +    L  L+H NI+  
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSL----LKDLKHANIVTL 65

Query: 196 IGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
                T ++    L LV  Y         D      +N H +      ++ GL + H   
Sbjct: 66  HDIIHTEKS----LTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCH--- 117

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR 310
                +  + HRD+K +N+L+   G   +ADFGLA + S       IP       V T  
Sbjct: 118 -----RQKVLHRDLKPQNLLINERGELKLADFGLARAKS-------IPTKTYDNEVVTLW 165

Query: 311 YMSPEIL 317
           Y  P+IL
Sbjct: 166 YRPPDIL 172

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 21/158 (13%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
            S+ +G G  G+V +   +    E  A+K+   +D     RE E++     +  +I+  +
Sbjct: 22  TSQVLGLGINGKVLQIF-NKRTQEKFALKML--QDCPKARREVELHWR-ASQCPHIVRIV 77

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGLVHLHTEI 253
                       L +V      G L+  +           +  +I  SI   + +LH+  
Sbjct: 78  DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS-- 135

Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLA 288
                   IAHRD+K +N+L  +   N    + DFG A
Sbjct: 136 ---IN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 57/226 (25%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASWSR-------ETEIYSTVLLRH 189
           +   +G G +G V+ G+        VA+K       + W           E+     +  
Sbjct: 47  VGPLLGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105

Query: 190 E--NILG---YIGSDMTSRNSCTQLWLVTHYHS-FGSLYDHL-NRTTLNHHQMMKICLSI 242
               ++    +               L+         L+D +  R  L           +
Sbjct: 106 GFSGVIRLLDWFERP-------DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKM-DI 300
           +  + H H           + HRDIK +NIL+  N   + + DFG           + D 
Sbjct: 159 LEAVRHCHNC--------GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDT 203

Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFK-----KADIYALGLVL 341
                 GT+ Y  PE +           +       A +++LG++L
Sbjct: 204 VYTDFDGTRVYSPPEWI----------RYHRYHGRSAAVWSLGILL 239

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 42/215 (19%)

Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILG 194
            +GKG +G+V   +    G   A+KI       ++DE + +  E  +      RH  +  
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTA 212

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEI 253
              S  T      +L  V  Y + G L+ HL+R  +      +     IV+ L +LH+E 
Sbjct: 213 LKYSFQTH----DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTK 309
                   + +RD+K +N+++  +G   I DFGL         K  I     +    GT 
Sbjct: 269 -------NVVYRDLKLENLMLDKDGHIKITDFGLC--------KEGIKDGATMKTFCGTP 313

Query: 310 RYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            Y++PE+L++         + +A D + LG+V++E
Sbjct: 314 EYLAPEVLED-------NDYGRAVDWWGLGVVMYE 341

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 32/215 (14%)

Query: 142 ECIGKGRYGEVW--RGVWHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG 194
             +G G YG V        G  VAVK     F S   A  + RE  +     ++HEN++G
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK--HMKHENVIG 92

Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
              + +   S      ++LVTH      L + +    L    +  +   I+ GL ++H+ 
Sbjct: 93  LLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K  N+ V  +    I DFGLA      +++M       V T+ Y 
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMT----GYVATRWYR 196

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
           +PEI+     ++     +  DI+++G ++ E+   
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAELLTG 226

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 38/215 (17%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           IG+G +GEV   +     +  A+KI        R E +  R E ++        + I   
Sbjct: 82  IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG--DSKWITTL 139

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-HHQMMKICLS-IVNGLVHLHTEI 253
             +     N    L+LV  Y+  G L   L++       +M +  L+ +V  +  +H   
Sbjct: 140 HYAFQDDNN----LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH--- 192

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-----VGT 308
                +    HRDIK  NIL+  NG   +ADFG             +          VGT
Sbjct: 193 -----QLHYVHRDIKPDNILMDMNGHIRLADFGSC--------LKLMEDGTVQSSVAVGT 239

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
             Y+SPEIL             + D ++LG+ ++E
Sbjct: 240 PDYISPEILQAMEGGKGRYG-PECDWWSLGVCMYE 273

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 52/253 (20%)

Query: 114 LDASLTSGSGSGLPLLIQRTLAKQISLS-------ECIGKGRYGEVW--RGVWHGENVAV 164
           +D +          L   +   +            + +G+G +  V   R +      A+
Sbjct: 1   MDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAI 60

Query: 165 KIFFSRDEASWSRETEIYST-----VL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHS 217
           KI    ++    +E ++        V+  L H   +    +          L+    Y  
Sbjct: 61  KIL---EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK----LYFGLSYAK 113

Query: 218 FGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT 276
            G L  ++ +         +   + IV+ L +LH      +G   I HRD+K +NIL+  
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-----KG---IIHRDLKPENILLNE 165

Query: 277 NGTCVIADFGLAVSYSQLSNK--MDIPPNPR----VGTKRYMSPEILDESINMDCFESFK 330
           +    I DFG A        K         R    VGT +Y+SPE+L E        + K
Sbjct: 166 DMHIQITDFGTA--------KVLSPESKQARANSFVGTAQYVSPELLTEK------SACK 211

Query: 331 KADIYALGLVLWE 343
            +D++ALG ++++
Sbjct: 212 SSDLWALGCIIYQ 224

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 62.6 bits (153), Expect = 5e-11
 Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 41/189 (21%)

Query: 144 IGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETE-IYSTVL--------LRHENIL 193
           +G+G YG V++     G  VA+K            E E I ST +        L H NI+
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALK------RIRLDAEDEGIPSTAIREISLLKELHHPNIV 82

Query: 194 GYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             I  D+        L LV  +       + D  N+T L   Q+      ++ G+ H H 
Sbjct: 83  SLI--DVIHSER--CLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQ 137

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGT 308
                     I HRD+K +N+L+ ++G   +ADFGLA ++        IP       V T
Sbjct: 138 H--------RILHRDLKPQNLLINSDGALKLADFGLARAFG-------IPVRSYTHEVVT 182

Query: 309 KRYMSPEIL 317
             Y +P++L
Sbjct: 183 LWYRAPDVL 191

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 46/195 (23%)

Query: 142 ECIGKGRYGEVWRGV-WHGENVAVK-IFFSRDEASWSRETEIYSTVLLRHENI--LGYIG 197
           + IG G +G V++      + VA+K +   +D+   +RE +I    +++H N+  L    
Sbjct: 46  KVIGNGSFGVVFQAKLVESDEVAIKKVL--QDKRFKNRELQIMR--IVKHPNVVDLKAFF 101

Query: 198 SDMTSRNSCTQLWLVTHY-----HSFGSLYDHLNRT-TLNH-----HQMMKICLSIVNGL 246
                +     L LV  Y     +     Y  L +T  +       +Q+++        L
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR-------SL 154

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
            ++H+      G   I HRDIK +N+L+   +G   + DFG A        K+ I   P 
Sbjct: 155 AYIHS-----IG---ICHRDIKPQNLLLDPPSGVLKLIDFGSA--------KILIAGEPN 198

Query: 306 VG---TKRYMSPEIL 317
           V    ++ Y +PE++
Sbjct: 199 VSYICSRYYRAPELI 213

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 62.1 bits (152), Expect = 6e-11
 Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 41/189 (21%)

Query: 144 IGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETE-IYSTVL--------LRHENIL 193
           IG+G YG V++   + GE  A+K      +    +E E I ST +        L+H NI+
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELKHSNIV 63

Query: 194 GYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
                D+       +L LV  +       L D      L         L ++NG+ + H 
Sbjct: 64  KLY--DVIHTKK--RLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD 118

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGT 308
                     + HRD+K +N+L+   G   IADFGLA ++        IP       + T
Sbjct: 119 R--------RVLHRDLKPQNLLINREGELKIADFGLARAFG-------IPVRKYTHEIVT 163

Query: 309 KRYMSPEIL 317
             Y +P++L
Sbjct: 164 LWYRAPDVL 172

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 61.8 bits (151), Expect = 6e-11
 Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 55/218 (25%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF------FSRDEASWSRETEIYSTVLLRHENILG 194
           +G G +G+V  G  H   G  VAVKI                RE +     L RH +I+ 
Sbjct: 19  LGVGTFGKVKIGE-HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK--LFRHPHIIK 75

Query: 195 -Y--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
            Y  I +        T  ++V  Y S G L+D++     +   +  ++   I++ + + H
Sbjct: 76  LYQVISTP-------TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM--DIPPNPRVGT 308
                   +  + HRD+K +N+L+  +    IADFG       LSN M          G+
Sbjct: 129 --------RHMVVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRTSCGS 173

Query: 309 KRYMSPEILDESINMDCFESFK-----KADIYALGLVL 341
             Y +PE++          S +     + DI++ G++L
Sbjct: 174 PNYAAPEVI----------SGRLYAGPEVDIWSCGVIL 201

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 61.8 bits (151), Expect = 7e-11
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 42/190 (22%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETE-IYSTVL--------LRHENI 192
           IG+G YG V++       E VA+K            + E + S+ L        L+H+NI
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALK------RVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 193 LGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           +     D+   +   +L LV  +        +D  N   L+   +      ++ GL   H
Sbjct: 64  VRLH--DVLHSDK--KLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCH 118

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVG 307
           +          + HRD+K +N+L+  NG   +A+FGLA ++        IP       V 
Sbjct: 119 SR--------NVLHRDLKPQNLLINRNGELKLANFGLARAFG-------IPVRCYSAEVV 163

Query: 308 TKRYMSPEIL 317
           T  Y  P++L
Sbjct: 164 TLWYRPPDVL 173

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 61.8 bits (151), Expect = 7e-11
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 40/191 (20%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK-IFFSRDE---ASWSRETEIYSTVL--LRHENILGY 195
           +G G Y  V++G     G  VA+K +    +E   ++  RE  +    +  L+HENI+  
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISL----MKELKHENIVRL 68

Query: 196 IGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHL 249
                T       L LV  +  +      D          L  + +      ++ GL   
Sbjct: 69  YDVIHTENK----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RV 306
           H           I HRD+K +N+L+   G   + DFGLA ++        IP N     V
Sbjct: 125 HENK--------ILHRDLKPQNLLINKRGQLKLGDFGLARAFG-------IPVNTFSSEV 169

Query: 307 GTKRYMSPEIL 317
            T  Y +P++L
Sbjct: 170 VTLWYRAPDVL 180

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 43/197 (21%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-M 200
           +G+G+Y EV+  +   + E V VKI     +    RE +I    L    NI+     D +
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNIITLA--DIV 100

Query: 201 TSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNH-----HQMMKICLSIVNGLVHLHTEI 253
               S T   +  H ++  F  LY  L   T        ++++K        L + H+  
Sbjct: 101 KDPVSRTPALVFEHVNNTDFKQLYQTL---TDYDIRFYMYEILK-------ALDYCHSM- 149

Query: 254 FGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                   I HRD+K  N+++   +    + D+GLA  Y     +     N RV ++ + 
Sbjct: 150 -------GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP-GQEY----NVRVASRYFK 197

Query: 313 SPEIL------DESINM 323
            PE+L      D S++M
Sbjct: 198 GPELLVDYQMYDYSLDM 214

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 61.9 bits (151), Expect = 9e-11
 Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 52/219 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILGYI 196
           IG+G Y +V   R        A+K+         ++  W + TE         +++    
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ-TE---------KHVFEQA 66

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
            +   +   +SC Q    L+ V  Y + G L  H+ R      +  +     I   L +L
Sbjct: 67  SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---- 305
           H      +G   I +RD+K  N+L+ + G   + D+G+         K  + P       
Sbjct: 127 HE-----RG---IIYRDLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSTF 170

Query: 306 VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            GT  Y++PEIL         E +  + D +ALG++++E
Sbjct: 171 CGTPNYIAPEILRG-------EDYGFSVDWWALGVLMFE 202

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 61.9 bits (151), Expect = 9e-11
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 32/215 (14%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK---IFFSRDEASWS-RETEIYSTVLLRHENILGYIG 197
           IG+G YG V       +   VA+K    F  +     + RE +I      RHENI+G   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL--RFRHENIIGIN- 91

Query: 198 SDM---TSRNSCTQLWLVTHYHSFGS-LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
            D+    +      +++V       + LY  L    L++  +      I+ GL ++H+  
Sbjct: 92  -DIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +
Sbjct: 148 -------NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE-YVATRWYRA 199

Query: 314 PEILDESINMDCFESFKKA-DIYALGLVLWEVCRR 347
           PEI      M   + + K+ DI+++G +L E+   
Sbjct: 200 PEI------MLNSKGYTKSIDIWSVGCILAEMLSN 228

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 52/219 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G+V   R    G+  AVK+         D+   +  TE         + IL   
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM-TE---------KRILSLA 80

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
            +   +T    C Q    L+ V  + + G L  H+ ++        +     I++ L+ L
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---- 305
           H +         I +RD+K  N+L+   G C +ADFG+         K  I         
Sbjct: 141 HDK--------GIIYRDLKLDNVLLDHEGHCKLADFGMC--------KEGICNGVTTATF 184

Query: 306 VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            GT  Y++PEIL E         +  A D +A+G++L+E
Sbjct: 185 CGTPDYIAPEILQE-------MLYGPAVDWWAMGVLLYE 216

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 51/218 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G+V   R    G   A+KI       ++DE + +  TE           +L   
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TE---------SRVLQNT 62

Query: 197 GSD-MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLH 250
               +T+     Q    L  V  Y + G L+ HL+R  +   +  +     IV+ L +LH
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV---- 306
                      + +RDIK +N+++  +G   I DFGL         K  I     +    
Sbjct: 123 --------SRDVVYRDIKLENLMLDKDGHIKITDFGLC--------KEGISDGATMKTFC 166

Query: 307 GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
           GT  Y++PE+L++         + +A D + LG+V++E
Sbjct: 167 GTPEYLAPEVLED-------NDYGRAVDWWGLGVVMYE 197

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 59/228 (25%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKI-------FFSRDEASWSRETEIYSTVLLR- 188
           L   +GKG +G V+ G         VA+K+        +S    S +   E+     +  
Sbjct: 35  LGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93

Query: 189 ---HENI---LGYIGSDMTSRNSCTQLWLVTHYH-SFGSLYDHL-NRTTLNHHQMMKICL 240
              H  +   L +  +            LV         L+D++  +  L          
Sbjct: 94  GGGHPGVIRLLDWFETQ-------EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKM- 298
            +V  + H H+          + HRDIK +NIL+     C  + DFG           + 
Sbjct: 147 QVVAAIQHCHSR--------GVVHRDIKDENILIDLRRGCAKLIDFG-------SGALLH 191

Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFK-----KADIYALGLVL 341
           D P     GT+ Y  PE +          S        A +++LG++L
Sbjct: 192 DEPYTDFDGTRVYSPPEWI----------SRHQYHALPATVWSLGILL 229

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 52/219 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILGYI 196
           IG+G Y +V   R        A+++         ++  W + TE         +++    
Sbjct: 60  IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQ-TE---------KHVFEQA 109

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHL 249
            +   +   +SC Q    L+ V  Y + G L  H+ R      +  +   + I   L +L
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--- 306
           H      +G   I +RD+K  N+L+ + G   + D+G+         K  + P       
Sbjct: 170 HE-----RG---IIYRDLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSTF 213

Query: 307 -GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            GT  Y++PEIL         E +  + D +ALG++++E
Sbjct: 214 CGTPNYIAPEILRG-------EDYGFSVDWWALGVLMFE 245

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 61.4 bits (150), Expect = 1e-10
 Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 41/191 (21%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVK--IFFSRDEASWS------RETEIYSTVL--LRHEN 191
           +G+G++  V++       + VA+K      R EA         RE ++    L  L H N
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL----LQELSHPN 73

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           I+G +  D     S   + LV  +       +    N   L    +    L  + GL +L
Sbjct: 74  IIGLL--DAFGHKS--NISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYL 128

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RV 306
           H           I HRD+K  N+L+  NG   +ADFGLA S+         P      +V
Sbjct: 129 HQH--------WILHRDLKPNNLLLDENGVLKLADFGLAKSFG-------SPNRAYTHQV 173

Query: 307 GTKRYMSPEIL 317
            T+ Y +PE+L
Sbjct: 174 VTRWYRAPELL 184

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 47/259 (18%), Positives = 93/259 (35%), Gaps = 69/259 (26%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWSRET--EIYSTVLLRHENIL 193
             IG+G YG V+        +NVA+K    +F    +    +    EI     L+ + I+
Sbjct: 32  HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC---KRILREITILNRLKSDYII 88

Query: 194 GYIGSDM---TSRNSCTQLWLVTHY---------HSFGSLYDHLNRTTLNHHQMMKICLS 241
                D+          +L++V             +   L +        H +   I  +
Sbjct: 89  RLY--DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTE-------EHIKT--ILYN 137

Query: 242 IVNGLVHLHTEIFGTQGKPA-IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
           ++ G   +H          + I HRD+K  N L+  + +  + DFGLA + +   +   +
Sbjct: 138 LLLGENFIHE---------SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188

Query: 301 PPNPR------------------VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVL 341
                                  V T+ Y +PE+      +   E++ K+ DI++ G + 
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL------ILLQENYTKSIDIWSTGCIF 242

Query: 342 WEVCRRTKANGIFEEYKAP 360
            E+    +++      + P
Sbjct: 243 AELLNMLQSHINDPTNRFP 261

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 55/218 (25%)

Query: 144 IGKGRYGEVWRGVWH---GENVAVKIF------FSRDEASWSRETEIYSTVLLRHENILG 194
           +G G +G+V  G  H   G  VAVKI                RE +     L RH +I+ 
Sbjct: 24  LGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK--LFRHPHIIK 80

Query: 195 -Y--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
            Y  I +        + +++V  Y S G L+D++     L+  +  ++   I++G+ + H
Sbjct: 81  LYQVISTP-------SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 133

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM--DIPPNPRVGT 308
                   +  + HRD+K +N+L+  +    IADFG       LSN M          G+
Sbjct: 134 --------RHMVVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRTSCGS 178

Query: 309 KRYMSPEILDESINMDCFESFK-----KADIYALGLVL 341
             Y +PE++          S +     + DI++ G++L
Sbjct: 179 PNYAAPEVI----------SGRLYAGPEVDIWSSGVIL 206

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 40/200 (20%)

Query: 142 ECIGKGRYGEVWRGV--WHGENVAVK----IFFSRDEASWS-RETEIYSTVLLRHENILG 194
             IG G YG V           VA+K    +F    +     RE  I +   L H++++ 
Sbjct: 59  HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILN--RLNHDHVVK 116

Query: 195 YIGSDM---TSRNSCTQLWLVTHY---------HSFGSLYDHLNRTTLNHHQMMKICLSI 242
            +  D+          +L++V             +   L       T  H +   +  ++
Sbjct: 117 VL--DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYL-------TELHIKT--LLYNL 165

Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
           + G+ ++H+          I HRD+K  N LV  + +  + DFGLA +     N     P
Sbjct: 166 LVGVKYVHSA--------GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP 217

Query: 303 NPRVGTKRYMSPEILDESIN 322
                    +      +++ 
Sbjct: 218 ISPREDDMNLVTFPHTKNLK 237

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 52/219 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G+V         E  AVKI         D+   +   E         + +L   
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VE---------KRVLALP 77

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHL 249
           G    +T  +SC Q    L+ V  Y + G L  H+ +             + I  GL  L
Sbjct: 78  GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--- 306
            ++         I +RD+K  N+++ + G   IADFG+         K +I         
Sbjct: 138 QSK--------GIIYRDLKLDNVMLDSEGHIKIADFGMC--------KENIWDGVTTKTF 181

Query: 307 -GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            GT  Y++PEI+         + + K+ D +A G++L+E
Sbjct: 182 CGTPDYIAPEIIAY-------QPYGKSVDWWAFGVLLYE 213

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 41/216 (18%)

Query: 143 CIGKGRYGEV-----WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
            +GKG YG+V       G   G+  A+K+   +         +   T   R  NIL  + 
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVL--KKAMIVRNAKDTAHTKAER--NILEEVK 79

Query: 198 SD-MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
              +       Q    L+L+  Y S G L+  L R  +         L+ I   L HLH 
Sbjct: 80  HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VG 307
                +G   I +RD+K +NI++   G   + DFGL         K  I          G
Sbjct: 140 -----KG---IIYRDLKPENIMLNHQGHVKLTDFGLC--------KESIHDGTVTHTFCG 183

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
           T  YM+PEIL  S         +  D ++LG ++++
Sbjct: 184 TIEYMAPEILMRS------GHNRAVDWWSLGALMYD 213

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 17/139 (12%)

Query: 209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRDI 267
           +++V      G L  HL +      + +K+ +  +V  L +L       Q    I HRD+
Sbjct: 90  MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN-----QR---IIHRDM 141

Query: 268 KSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFE 327
           K  NIL+  +G   I DF +A    +     +       GTK YM+PE+           
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPR-----ETQITTMAGTKPYMAPEMFSSRKGAGY-- 194

Query: 328 SFKKADIYALGLVLWEVCR 346
                D ++LG+  +E+ R
Sbjct: 195 -SFAVDWWSLGVTAYELLR 212

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 52/221 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G+V         E  AVKI         D+   +   E         + +L   
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VE---------KRVLALP 398

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
           G    +T  +SC Q    L+ V  Y + G L  H+ +               I  GL  L
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--- 306
            ++         I +RD+K  N+++ + G   IADFG+         K +I         
Sbjct: 459 QSK--------GIIYRDLKLDNVMLDSEGHIKIADFGMC--------KENIWDGVTTKTF 502

Query: 307 -GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVC 345
            GT  Y++PEI+         + + K+ D +A G++L+E+ 
Sbjct: 503 CGTPDYIAPEIIAY-------QPYGKSVDWWAFGVLLYEML 536

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 60/224 (26%)

Query: 140 LSECIGKGRYGEVWRGVWH---GENVAVKIF------FSRDEASWSRETEIYSTVLLRHE 190
           + E +G+G +G+V     H    + VA+K         S       RE       LLRH 
Sbjct: 13  IRETLGEGSFGKVKLAT-HYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK--LLRHP 69

Query: 191 NILG-Y--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGL 246
           +I+  Y  I +        T + +V  Y   G L+D++  +  +   +  +    I+  +
Sbjct: 70  HIIKLYDVITTP-------TDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAI 121

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            + H        +  I HRD+K +N+L+  N    IADFG       LSN M       +
Sbjct: 122 EYCH--------RHKIVHRDLKPENLLLDDNLNVKIADFG-------LSNIM--TDGNFL 164

Query: 307 ----GTKRYMSPEILDESINMDCFESFK-----KADIYALGLVL 341
               G+  Y +PE++          + K     + D+++ G+VL
Sbjct: 165 KTSCGSPNYAAPEVI----------NGKLYAGPEVDVWSCGIVL 198

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 47/218 (21%)

Query: 143 CIGKGRYGEV-----WRGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLL--RHE 190
            +G+G +G+V       G    +  A+K+        RD       T++   +L+   H 
Sbjct: 31  VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV----RTKMERDILVEVNHP 86

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHL 249
            I+    +  T      +L+L+  +   G L+  L++  +   + +K  L+ +   L HL
Sbjct: 87  FIVKLHYAFQTE----GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---- 305
           H           I +RD+K +NIL+   G   + DFGL+        K  I    +    
Sbjct: 143 H--------SLGIIYRDLKPENILLDEEGHIKLTDFGLS--------KESIDHEKKAYSF 186

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
            GT  YM+PE+++           + AD ++ G++++E
Sbjct: 187 CGTVEYMAPEVVNRR------GHTQSADWWSFGVLMFE 218

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 48/195 (24%)

Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETE-IYSTVL--------LRHENI 192
           +G+G YGEV++       E VA+K            E E +  T +        L+H NI
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIK------RIRLEHEEEGVPGTAIREVSLLKELQHRNI 95

Query: 193 LGYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
           +      +   N   +L L+  Y  +      D      ++   +      ++NG+   H
Sbjct: 96  IELK--SVIHHNH--RLHLIFEYAENDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCH 149

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-----IADFGLAVSYSQLSNKMDIPPNP- 304
                        HRD+K +N+L+  +         I DFGLA ++        IP    
Sbjct: 150 --------SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-------IPIRQF 194

Query: 305 --RVGTKRYMSPEIL 317
              + T  Y  PEIL
Sbjct: 195 THEIITLWYRPPEIL 209

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 67/241 (27%)

Query: 144 IGKGRYGEVWRGV--WHGENVAVK-IFFSRDEASWSRET--EIYSTVLLR----HENILG 194
           +GKG YG VW+ +    GE VAVK IF +   ++ ++ T  EI   ++L     HENI+ 
Sbjct: 17  LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI---MILTELSGHENIVN 73

Query: 195 YIGSDMTSRNSCTQLWLVTHY---------HSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
            +  ++   ++   ++LV  Y          +        N     H Q   +   ++  
Sbjct: 74  LL--NVLRADNDRDVYLVFDYMETDLHAVIRA--------NILEPVHKQY--VVYQLIKV 121

Query: 246 LVHLHTEIFGTQGKPA-IAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           + +LH+           + HRD+K  NIL+       +ADFGL+ S+  +    +  P  
Sbjct: 122 IKYLHS---------GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS 172

Query: 305 R-----------------VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCR 346
                             V T+ Y +PEI      +     + K  D+++LG +L E+  
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEI------LLGSTKYTKGIDMWSLGCILGEILC 226

Query: 347 R 347
            
Sbjct: 227 G 227

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 52/219 (23%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENILGYI 196
           +GKG +G+V+        +  A+K          D+   +   E         + +L   
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM-VE---------KRVLSLA 74

Query: 197 GSD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
                +T      Q    L+ V  Y + G L  H+      +  +       I+ GL  L
Sbjct: 75  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 134

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--- 306
           H++         I +RD+K  NIL+  +G   IADFG+         K ++  + +    
Sbjct: 135 HSK--------GIVYRDLKLDNILLDKDGHIKIADFGMC--------KENMLGDAKTNTF 178

Query: 307 -GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            GT  Y++PEIL         + +  + D ++ G++L+E
Sbjct: 179 CGTPDYIAPEILLG-------QKYNHSVDWWSFGVLLYE 210

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 28/107 (26%)

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
           I + L +LH           I +RD+K +NIL+ + G  V+ DFGL         K +I 
Sbjct: 148 IASALGYLH--------SLNIVYRDLKPENILLDSQGHIVLTDFGLC--------KENIE 191

Query: 302 PNPR----VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
            N       GT  Y++PE+L +       + + +  D + LG VL+E
Sbjct: 192 HNSTTSTFCGTPEYLAPEVLHK-------QPYDRTVDWWCLGAVLYE 231

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 57.2 bits (138), Expect = 3e-09
 Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 49/230 (21%)

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
           L  I S  +S +S                 + L +  L    ++     +  G+  L + 
Sbjct: 153 LDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 212

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSN-KMDIPPNPR 305
                      HRD+ ++NIL+       I DFGLA        Y +  + ++ +     
Sbjct: 213 KC--------IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL----- 259

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
               ++M+P    E+I    +    ++D+++ G++LWE         IF    +PY   V
Sbjct: 260 ----KWMAP----ETIFDRVYTI--QSDVWSFGVLLWE---------IFSLGASPYPG-V 299

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
            +D  F    K    +  R   P     D T   M + M +CWH   + R
Sbjct: 300 KIDEEFCRRLK----EGTRMRAP-----DYTTPEMYQTMLDCWHGEPSQR 340

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 34/184 (18%)

Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVK----IFFSRDEASWSRETEIYSTV 185
           ++ L + +G+G +G+V      G         VAVK         +  +   E +I    
Sbjct: 23  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH- 81

Query: 186 LLRHENILGYIGSDMTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS 241
           +  H N++  +G       +CT+    L ++  +  FG+L  +L                
Sbjct: 82  IGHHLNVVNLLG-------ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGAR 134

Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
              G           +        D+K +   + ++ +   + F    S S +  +    
Sbjct: 135 FRQG-----------KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE 183

Query: 302 PNPR 305
              +
Sbjct: 184 DLYK 187

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 52/266 (19%), Positives = 94/266 (35%), Gaps = 78/266 (29%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR 188
             T +K+ SL + +G G +G V        G+  A+K    +D    +RE +I    +L 
Sbjct: 2   LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL-QDPRYKNRELDIMK--VLD 58

Query: 189 HENILG----------------------------------YIGSDMTSRNSCTQLWLVTH 214
           H NI+                                   +  S + + +    L ++  
Sbjct: 59  HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118

Query: 215 Y-----HSFGSLYDHLNRT-TLNHHQ--MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
           Y     H     +    R+  +N     + ++       +  +H+          I HRD
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFR----AVGFIHSL--------GICHRD 166

Query: 267 IKSKNILVKTNGTCV--IADFGLAVSYSQLSNKMDIPPNPRVG---TKRYMSPEILDESI 321
           IK +N+LV +       + DFG A        K  IP  P V    ++ Y +PE++    
Sbjct: 167 IKPQNLLVNSK-DNTLKLCDFGSA--------KKLIPSEPSVAYICSRFYRAPELM---- 213

Query: 322 NMDCFESFKKADIYALGLVLWEVCRR 347
            +   E     D++++G V  E+   
Sbjct: 214 -LGATEYTPSIDLWSIGCVFGELILG 238

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 56.6 bits (137), Expect = 6e-09
 Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 61/231 (26%)

Query: 144 IGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
           +G G +  VW       +  +VA+KI       + + E EI    LL+  N       D 
Sbjct: 27  LGWGHFSTVWL-AKDMVNNTHVAMKIVRGDKVYTEAAEDEI---KLLQRVNDADNTKEDS 82

Query: 201 TSRNSCTQLWLVTHYHSF------------------GSLYDHLNRTT---LNHHQMMKIC 239
              N   +L        F                   +L   + +     +    + +I 
Sbjct: 83  MGANHILKL-----LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137

Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV------IADFGLAVSYSQ 293
             ++ GL ++H           I H DIK +N+L++   +        IAD G A  Y +
Sbjct: 138 KQLLLGLDYMHRRC-------GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190

Query: 294 LSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWE 343
                       + T+ Y SPE +L              ADI++   +++E
Sbjct: 191 -------HYTNSIQTREYRSPEVLLGAPWGC-------GADIWSTACLIFE 227

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 41/218 (18%)

Query: 143 CIGKGRYGEVW-----RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
            +G G YG+V+      G   G+  A+K+   +      +      T   R   +L +I 
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVL--KKATIVQKAKTTEHTRTER--QVLEHIR 116

Query: 198 SD--MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLH 250
               + + +   Q    L L+  Y + G L+ HL++        ++I +  IV  L HLH
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV---- 306
                  G   I +RDIK +NIL+ +NG  V+ DFGL+        K  +          
Sbjct: 177 K-----LG---IIYRDIKLENILLDSNGHVVLTDFGLS--------KEFVADETERAYDF 220

Query: 307 -GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
            GT  YM+P+I+            K  D ++LG++++E
Sbjct: 221 CGTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYE 254

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 66/481 (13%), Positives = 144/481 (29%), Gaps = 130/481 (27%)

Query: 20  DFCNNGSFPILPPSY------RELPEYAQR------YDYILKLSMAILGPVIVLGML--- 64
            +       +   ++      +++ +  +        D+I+    A+ G + +   L   
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK 74

Query: 65  -AAVIVLFMRRNHRK--KLLAARAIQSDPDCFLADADLLRATAAGDSTLREYLDASLTSG 121
              ++  F+    R   K L +  I+++           R  +       E  D  L + 
Sbjct: 75  QEEMVQKFVEEVLRINYKFLMSP-IKTEQ----------RQPSMMTRMYIEQRD-RLYND 122

Query: 122 SGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHG--------------ENVAVKIF 167
           +       + R L   + L + + + R  +    +  G               +  V+  
Sbjct: 123 NQVFAKYNVSR-LQPYLKLRQALLELRPAK-NVLI-DGVLGSGKTWVALDVCLSYKVQCK 179

Query: 168 FSRDEASW--SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL 225
               +  W   +      TVL   + +L  I  + TSR+  +            S+   L
Sbjct: 180 MD-FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS----NIKLRIHSIQAEL 234

Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
            R  L   +  + CL ++  +          Q   A    ++  K IL+ T    V  DF
Sbjct: 235 RR--LLKSKPYENCLLVLLNV----------QNAKAWNAFNLSCK-ILLTTRFKQV-TDF 280

Query: 286 GLAVSYSQLSNKM-----------------------DIPP-----NPRVGTKRYMSPEIL 317
             A + + +S                          D+P      NPR  +   +  E +
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---IIAESI 337

Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKV 377
            + +    ++++K  +   L  ++ E            EY+  +  L    PS      +
Sbjct: 338 RDGLAT--WDNWKHVNCDKLTTII-ESSLNVLE---PAEYRKMFDRLSVFPPSAHIPTIL 391

Query: 378 ICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM--YI 435
           + +      +   W      + M  V+ +               K +L++    +    I
Sbjct: 392 LSL------I---WFDVIKSDVM-VVVNKL-------------HKYSLVEKQPKESTISI 428

Query: 436 H 436
            
Sbjct: 429 P 429

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 53.2 bits (128), Expect = 7e-08
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 44/213 (20%)

Query: 130 IQRTLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKI--FFSRDEASWSRETEIYSTV 185
           +      Q  L + IG G +G ++        E  A  +     ++      E + Y   
Sbjct: 31  LDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFY--- 87

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFG-------------------SLYDHLN 226
               + +                   +  ++  G                    L     
Sbjct: 88  ----QRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISG 143

Query: 227 RT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVIA 283
           +  T     ++++ + +++ L ++H   +         H DIK+ N+L+  K      +A
Sbjct: 144 QNGTFKKSTVLQLGIRMLDVLEYIHENEY--------VHGDIKAANLLLGYKNPDQVYLA 195

Query: 284 DFGLAVSYSQLSNKMDIPPNPR---VGTKRYMS 313
           D+GL+  Y    N      NPR    GT  + S
Sbjct: 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS 228

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 36/209 (17%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           +G G +G V   +    G + A+KI          +   +  E  I   V      ++  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKL 106

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIF 254
             S   + N    L++V  Y + G ++ HL R         +   + IV    +LH+   
Sbjct: 107 EFSFKDNSN----LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + +RD+K +N+L+   G   + DFG A      +  +        GT   ++P
Sbjct: 161 ------DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-------CGTPEALAP 207

Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           EI+            K  D +ALG++++E
Sbjct: 208 EIILSK------GYNKAVDWWALGVLIYE 230

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 33/195 (16%)

Query: 144 IGKGRYGEVWRGVWH-GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           IG+G +G ++    +  E+V             D      E + Y       +       
Sbjct: 43  IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102

Query: 198 SDMTSRNSCTQLWLVTHYHSFG------------SLYDHLNRT--TLNHHQMMKICLSIV 243
             +             H  +               L           +   ++++ L I+
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRIL 162

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIP 301
           + L ++H   +         H DIK+ N+L+  K      + D+GLA  Y          
Sbjct: 163 DILEYIHEHEY--------VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYA 214

Query: 302 PNPR---VGTKRYMS 313
            +P+    GT  + S
Sbjct: 215 ADPKRCHDGTIEFTS 229

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 45/204 (22%), Positives = 71/204 (34%), Gaps = 61/204 (29%)

Query: 140 LSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
           + + IG G +GE+  G  ++  E VA+K+   +  A     E   Y         +    
Sbjct: 13  VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQ-------LGSGD 65

Query: 197 GSDMTSRNSCTQLWLVTHYHSFG---------------SLYDHLNRTTLNHHQMMKICLS 241
           G              +   + FG               SL D  +    +    +K  L 
Sbjct: 66  G--------------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDL--CDRTFSLKTVLM 109

Query: 242 I----VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-----KTNGTCVIADFGLAVSYS 292
           I    ++ + ++H++           +RD+K +N L+     KT     I DF LA  Y 
Sbjct: 110 IAIQLISRMEYVHSKNL--------IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161

Query: 293 QLSNKMDIPPNPR---VGTKRYMS 313
               K  IP        GT RYMS
Sbjct: 162 DPETKKHIPYREHKSLTGTARYMS 185

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 48/206 (23%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGYI- 196
             IGKG +G+V +       E VA+KI   +++ ++    + E+          +L  + 
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLNQAQIEV---------RLLELMN 108

Query: 197 GSDMTSRNSCTQL--WLVTHYH---SF----GSLYDHLNRTT---LNHHQMMKICLSIVN 244
             D   +     L    +   H    F     +LYD L  T    ++ +   K    +  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI--ADFGLAVSYSQLSNKMDIPP 302
            L+ L T       + +I H D+K +NIL+       I   DFG   S  QL  ++    
Sbjct: 169 ALLFLATP------ELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRI---- 215

Query: 303 NPRVGTKRYMSPEIL-----DESINM 323
              + ++ Y SPE+L     D +I+M
Sbjct: 216 YQYIQSRFYRSPEVLLGMPYDLAIDM 241

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 36/209 (17%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSR-ETEIYSTVLLRHENILGY 195
           +G G +G V   R   +G   A+K+          +   +  E  + S V   H  I+  
Sbjct: 14  LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV--THPFIIRM 71

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIF 254
            G+   ++     ++++  Y   G L+  L ++    + + K   + +   L +LH++  
Sbjct: 72  WGTFQDAQQ----IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK-- 125

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I +RD+K +NIL+  NG   I DFG A     ++  +        GT  Y++P
Sbjct: 126 ------DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-------CGTPDYIAP 172

Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
           E++            K  D ++ G++++E
Sbjct: 173 EVVSTK------PYNKSIDWWSFGILIYE 195

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 63/229 (27%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGYI- 196
           + IGKG +G+V +   H   ++VA+K+   R+E  + R    EI          IL ++ 
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMV--RNEKRFHRQAAEEI---------RILEHLR 151

Query: 197 GSDMTSRNSCTQLW----------LVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIV 243
             D  +  +   +           +     S  +LY+ + +      +   + K   SI+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSIL 210

Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI--ADFGLAVSYSQLSNKMDIP 301
             L  LH        K  I H D+K +NIL+K  G   I   DFG +    Q        
Sbjct: 211 QCLDALH--------KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-------R 255

Query: 302 PNPRVGTKRYMSPEIL-----DESINMDCFESFKKADIYALGLVLWEVC 345
               + ++ Y +PE++        I           D+++LG +L E+ 
Sbjct: 256 VYTYIQSRFYRAPEVILGARYGMPI-----------DMWSLGCILAELL 293

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 23/214 (10%), Positives = 55/214 (25%), Gaps = 71/214 (33%)

Query: 144 IGKGRYGEVWRGV----------WHGENVAVKIFFSRDEASWSR---ETEIYSTVLLRHE 190
             +   G ++                +  ++K+     +A   R   E   +       +
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKL-----DAKDGRLFNEQNFFQRAAKPLQ 104

Query: 191 -------NILGYIGSDMTSRNSCTQLWLVTHYHSFGS-------------------LYDH 224
                       +               +     FG                      D 
Sbjct: 105 VNKWKKLYSTPLLA--------------IPTCMGFGVHQDKYRFLVLPSLGRSLQSALDV 150

Query: 225 LNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVI 282
             +  L+   ++++   +++ L  LH   +         H ++ ++NI V  +      +
Sbjct: 151 SPKHVLSERSVLQVACRLLDALEFLHENEY--------VHGNVTAENIFVDPEDQSQVTL 202

Query: 283 ADFGLAVSYSQLSNKMDIPPNPR---VGTKRYMS 313
           A +G A  Y      +      R    G   ++S
Sbjct: 203 AGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS 236

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 21/183 (11%)

Query: 140 LSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
           L   IG G +GE++ G  +   E VA+K+   + +      E++IY   L     I    
Sbjct: 11  LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRI-LQGGTGIPNVR 69

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
              +    +   + L+    S   L++  +R  L+   ++ +   ++N +  +H++ F  
Sbjct: 70  WFGVEGDYNVLVMDLLGP--SLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF-- 124

Query: 257 QGKPAIAHRDIKSKNILVKTNGTC---VIADFGLAVSYSQLSNKMDIPPNPR---VGTKR 310
                  HRDIK  N L+          I DFGLA  Y   S    IP        GT R
Sbjct: 125 ------LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178

Query: 311 YMS 313
           Y S
Sbjct: 179 YAS 181

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 21/183 (11%)

Query: 140 LSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
           L   IG G +G+++ G  +  GE VA+K+   + +      E++IY   +     I    
Sbjct: 13  LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKM-MQGGVGIPTIR 71

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                   +   + L+    S   L++  +R   +   ++ +   +++ + ++H++ F  
Sbjct: 72  WCGAEGDYNVMVMELLGP--SLEDLFNFCSRK-FSLKTVLLLADQMISRIEYIHSKNF-- 126

Query: 257 QGKPAIAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTKR 310
                  HRD+K  N L+   K      I DFGLA  Y        IP        GT R
Sbjct: 127 ------IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 180

Query: 311 YMS 313
           Y S
Sbjct: 181 YAS 183

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 44/209 (21%), Positives = 69/209 (33%), Gaps = 71/209 (33%)

Query: 140 LSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
           +   IG+G +G ++ G  + + + VA+K    R +A     E   Y         + G  
Sbjct: 14  VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKL-------LAGCT 66

Query: 197 GSDMTSRNSCTQLWLVTHYHSFG---------------SLYDHLN--------RTTLN-H 232
           G              + + + FG               SL D L+        +T     
Sbjct: 67  G--------------IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAA 112

Query: 233 HQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-----KTNGTCVIADFGL 287
            QM+         +  +H +           +RDIK  N L+     K      + DFG+
Sbjct: 113 KQMLAR-------VQSIHEKSL--------VYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157

Query: 288 AVSYSQLSNKMDIPPNPR---VGTKRYMS 313
              Y     K  IP   +    GT RYMS
Sbjct: 158 VKFYRDPVTKQHIPYREKKNLSGTARYMS 186

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 81/261 (31%)

Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
           +G G +  VW    +   + VA+K+  S   A    ET +    LL+    +     +  
Sbjct: 45  LGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKS---VRNSDPNDP 98

Query: 202 SRNSCTQLW--------------LVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
           +R    QL               +V     H         N   L    + KI   ++ G
Sbjct: 99  NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG 158

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM------- 298
           L +LHT+         I H DIK +NIL+  N   +      A  + +            
Sbjct: 159 LDYLHTKC-------RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVS 211

Query: 299 -----------------------------------DIPPNPRVGTKRYMSPE-ILDESIN 322
                                                     + T++Y S E ++    N
Sbjct: 212 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271

Query: 323 MDCFESFKKADIYALGLVLWE 343
                    ADI++   + +E
Sbjct: 272 T-------PADIWSTACMAFE 285

>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B Length = 129

 Score = 41.3 bits (96), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 4   CHSVNVGQFTIQCCDGDFCNNGSFPILPPS 33
                  + TI+CC  + CN    P LPP 
Sbjct: 89  DSPKAQLRRTIECCRTNLCNQYLQPTLPPV 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	443
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.94
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.9
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.83
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.7
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.14
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.06
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.78
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.58
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.44
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.35
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.33
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.26
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.18
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.92
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.86
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.8
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.77
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.62
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.5
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.47
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.23
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.16
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.06
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.05
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	96.97
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.96
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	96.95
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.52
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.45
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.37
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	96.13
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.61
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.16
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	92.78
4fao_E	124	Activin receptor type-2B; TGF-beta, CTK, cystine k	92.33
1iij_A	35	ERBB-2 receptor protein-tyrosine kinase; alpha-hel	92.27
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	90.32
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	89.72
1bte_A	97	Protein (activin receptor type II); serine kinase,	89.3
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	86.48
2klu_A	70	T-cell surface glycoprotein CD4; cell membrane, di	85.94
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	85.65
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	85.17
4fao_C	106	Serine/threonine-protein kinase receptor R3; TGF-b	80.45
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	80.18

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.2e-65  Score=488.31  Aligned_cols=298  Identities=62%  Similarity=1.061  Sum_probs=254.8

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .++|.+.+.||+|+||+||+|+++|+.||||++.......+.+|.|+..+..++|||||+++|++.+.......++||||
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            36789999999999999999999999999999987776677778888888789999999999999877655457899999


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      ||++|||.+++++..+++..+.+++.|+|+||+|||++.......++||||||||+||||+.++++||+|||+|+.....
T Consensus        82 y~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  161 (303)
T 3hmm_A           82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence            99999999999999999999999999999999999987544445679999999999999999999999999999877654


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ...........+||+.|||||++.+........++.++|||||||+||||+||+++++.....+.||.+..+..+..+.+
T Consensus       162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~  241 (303)
T 3hmm_A          162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM  241 (303)
T ss_dssp             TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred             CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence            44333334456899999999999765332222456799999999999999999999888888899999988888888888


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      .+.+.....+|.+|..+.+.+++..+.+||.+||+.||++||||.||++.|+++.+..
T Consensus       242 ~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~  299 (303)
T 3hmm_A          242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence            8887777788888877777778889999999999999999999999999999998653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-58  Score=439.14  Aligned_cols=266  Identities=29%  Similarity=0.428  Sum_probs=208.3

Q ss_pred             hhccccccceeeeecCeEEEEEEECCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..+++.+.+.||+|+||+||+|++++ .||||+++.....   ......|+..+..++|||||+++|++..+     .++
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-----~~~  107 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-----NLA  107 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----SCE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC-----eEE
Confidence            34688999999999999999999865 5999998643322   22335677777789999999999988543     268


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||||++|||.++|+.  ..+++.+++.|+.|||+||+|||++        +||||||||+||||++++.+||+|||+|
T Consensus       108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~--------~IiHRDlKp~NILl~~~~~~Ki~DFGla  179 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK--------NIIHRDMKSNNIFLHEGLTVKIGDFGLA  179 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred             EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccCCccCHHHEEECCCCcEEEeeccCc
Confidence            99999999999999954  5799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.........  .....+||+.|||||++.+....   .|+.++|||||||+||||+||          +.||.+..   
T Consensus       180 ~~~~~~~~~~--~~~~~~GT~~ymAPE~l~~~~~~---~y~~ksDVwS~Gvvl~Elltg----------~~Pf~~~~---  241 (307)
T 3omv_A          180 TVKSRWSGSQ--QVEQPTGSVLWMAPEVIRMQDNN---PFSFQSDVYSYGIVLYELMTG----------ELPYSHIN---  241 (307)
T ss_dssp             BC--------------CCCCTTSCCHHHHHCCSSC---CCCHHHHHHHHHHHHHHHHHS----------SCTTTTCC---
T ss_pred             eecccCCcce--eecccccCCCccCHHHhhccCCC---CCCcHHHhHhHHHHHHHHHHC----------CCCCCCCC---
Confidence            8765432221  12446899999999999754221   577899999999999999999          77886642   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                       ....+...+......|.++.  ....+++++.+||.+||+.||++|||+.||++.|+.+....+.
T Consensus       242 -~~~~~~~~~~~~~~~p~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          242 -NRDQIIFMVGRGYASPDLSK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             -CHHHHHHHHHTTCCCCCSTT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             -hHHHHHHHHhcCCCCCCccc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence             23344444443333343332  2345788999999999999999999999999999998876554

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.6e-59  Score=441.91  Aligned_cols=258  Identities=26%  Similarity=0.389  Sum_probs=210.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|.+.+.||+|+||+||+|++.       +..||||+++..... ......|+..+.+++|||||+++|++.+..   
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---   88 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---   88 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC---
Confidence            468999999999999999999873       578999998654332 223456777777799999999999998764   


Q ss_pred             cEEEeeecccCcccHHHHhcc--------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI  272 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~Ni  272 (443)
                       .++||||||++|||.++|+.              ..++|.+++.++.|||+||+|||++        +||||||||+||
T Consensus        89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--------~iiHRDlKp~NI  159 (299)
T 4asz_A           89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ--------HFVHRDLATRNC  159 (299)
T ss_dssp             -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGE
T ss_pred             -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCccCHhhE
Confidence             47999999999999999964              3599999999999999999999998        999999999999


Q ss_pred             EEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCC
Q psy14889        273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKAN  351 (443)
Q Consensus       273 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~  351 (443)
                      ||++++.+||+|||+|+.........  ......||+.|||||++.+.      .++.++|||||||+||||+| |    
T Consensus       160 Ll~~~~~~Ki~DFGla~~~~~~~~~~--~~~~~~gt~~ymAPE~~~~~------~~~~k~DVwS~Gvvl~Ellt~G----  227 (299)
T 4asz_A          160 LVGENLLVKIGDFGMSRDVYSTDYYR--VGGHTMLPIRWMPPESIMYR------KFTTESDVWSLGVVLWEIFTYG----  227 (299)
T ss_dssp             EECGGGCEEECCCSCHHHHTGGGCEE--ETTTEEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTT----
T ss_pred             EECCCCcEEECCcccceecCCCCcee--ecCceecChhhcCHHHHcCC------CCCchhhHHHHHHHHHHHHcCC----
Confidence            99999999999999998665432211  12345799999999999887      78899999999999999999 7    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                            +.||.+.     ...++...+.. ..++..|     ..+++++.+||.+||+.||++|||+.||++.|+++.+.
T Consensus       228 ------~~Pf~~~-----~~~~~~~~i~~-~~~~~~p-----~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          228 ------KQPWYQL-----SNNEVIECITQ-GRVLQRP-----RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             ------CCTTTTS-----CHHHHHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCC-----CHHHHHHHHHc-CCCCCCC-----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                  7788764     33444444433 3334444     34778899999999999999999999999999999876


Q ss_pred             cc
Q psy14889        432 DM  433 (443)
Q Consensus       432 ~~  433 (443)
                      .+
T Consensus       291 ~p  292 (299)
T 4asz_A          291 SP  292 (299)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.7e-58  Score=442.13  Aligned_cols=252  Identities=24%  Similarity=0.370  Sum_probs=206.2

Q ss_pred             ccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      +++++.+.||+|+||+||+|.+       +++.||||+++.....  ......|+..+.+++|||||+++|+|.+...  
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~--  103 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP--  103 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE--
Confidence            5788899999999999999987       3578999998654322  2234456666677999999999999987643  


Q ss_pred             cEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS  269 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~  269 (443)
                        ++||||||++|||.++|..                 ..++|.+++.|+.|||+||+|||++        +||||||||
T Consensus       104 --~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--------~iiHRDLK~  173 (308)
T 4gt4_A          104 --LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH--------HVVHKDLAT  173 (308)
T ss_dssp             --CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSG
T ss_pred             --EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--------CCCCCCccc
Confidence              6999999999999999942                 3589999999999999999999999        999999999


Q ss_pred             CCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cc
Q psy14889        270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RT  348 (443)
Q Consensus       270 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~  348 (443)
                      +||||++++.+||+|||+|+.+......  .......||+.|||||++.++      .++.++|||||||+||||+| | 
T Consensus       174 ~NILl~~~~~~Ki~DFGlar~~~~~~~~--~~~~~~~gt~~ymAPE~l~~~------~~s~ksDVwSfGvvl~El~t~g-  244 (308)
T 4gt4_A          174 RNVLVYDKLNVKISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG-  244 (308)
T ss_dssp             GGEEECGGGCEEECCSCCBCGGGGGGCB--CSSSSSCBCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTT-
T ss_pred             cceEECCCCCEEECCcccceeccCCCce--eEecccccCCcccCHHHHhCC------CCCccchhhhHHHHHHHHHhCC-
Confidence            9999999999999999999876543222  122456799999999999887      78899999999999999998 6 


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                               ..||.+.     ...++...+.. ..++..|     +.++.++.+||.+||+.||++|||+.||++.|+.+
T Consensus       245 ---------~~Pf~~~-----~~~~~~~~i~~-~~~~~~p-----~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          245 ---------LQPYCGY-----SNQDVVEMIRN-RQVLPCP-----DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             ---------CCTTTTC-----CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ---------CCCCCCC-----CHHHHHHHHHc-CCCCCCc-----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                     6788764     33444444433 3333344     45778999999999999999999999999999865

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5e-58  Score=442.81  Aligned_cols=258  Identities=25%  Similarity=0.378  Sum_probs=204.9

Q ss_pred             hccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|.+.++||+|+||+||+|++.       ++.||||+++..... ......|+..+..++|||||+++|+|.+..   
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---  116 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---  116 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC---
Confidence            367889999999999999999873       678999998654332 223456777777799999999999998764   


Q ss_pred             cEEEeeecccCcccHHHHhcc----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSK  270 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~  270 (443)
                       .++||||||++|||.+++++                ..++|.+++.|+.|||+||+|||+.        +||||||||+
T Consensus       117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--------~iiHRDLKp~  187 (329)
T 4aoj_A          117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--------HFVHRDLATR  187 (329)
T ss_dssp             -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGG
T ss_pred             -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC--------CeecccccHh
Confidence             47999999999999999853                3589999999999999999999998        9999999999


Q ss_pred             CEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-ccc
Q psy14889        271 NILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTK  349 (443)
Q Consensus       271 NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~  349 (443)
                      ||||++++.+||+|||+|+.+......  .......||+.|||||++.+.      .++.++|||||||+||||+| |  
T Consensus       188 NILl~~~~~~Ki~DFGla~~~~~~~~~--~~~~~~~gt~~ymAPE~~~~~------~~~~~sDvwS~Gvvl~Ellt~G--  257 (329)
T 4aoj_A          188 NCLVGQGLVVKIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYR------KFTTESDVWSFGVVLWEIFTYG--  257 (329)
T ss_dssp             GEEEETTTEEEECCCC------------------CCCCGGGCCHHHHTTC------CCCHHHHHHHHHHHHHHHHTTS--
T ss_pred             hEEECCCCcEEEcccccceeccCCCcc--eecCcccccccccChhhhcCC------CCCccccccchHHHHHHHHcCC--
Confidence            999999999999999999876543221  112345799999999999877      78899999999999999999 7  


Q ss_pred             CCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        350 ANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       350 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                              +.||.+.     ...++...+.. ..++..|     ..+++++.+||.+||+.||++|||+.||++.|+.+.
T Consensus       258 --------~~Pf~~~-----~~~~~~~~i~~-g~~~~~p-----~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          258 --------KQPWYQL-----SNTEAIDCITQ-GRELERP-----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             --------CCTTCSS-----CHHHHHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             --------CCCCCCC-----CHHHHHHHHHc-CCCCCCc-----ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence                    7788764     23344443332 3344444     347788999999999999999999999999999998


Q ss_pred             hccc
Q psy14889        430 CADM  433 (443)
Q Consensus       430 ~~~~  433 (443)
                      +..+
T Consensus       319 ~~pp  322 (329)
T 4aoj_A          319 QAPP  322 (329)
T ss_dssp             HSCC
T ss_pred             hCCc
Confidence            8754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.9e-56  Score=431.86  Aligned_cols=247  Identities=26%  Similarity=0.383  Sum_probs=203.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.|++.+.||+|+||+||+|++  +|+.||||++...... ......|+..+..++|||||++++++.+.    ..+|||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----~~~~iv  149 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DELWVV  149 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET----TEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEEEEE
Confidence            5799999999999999999998  5899999998654322 22234556666669999999999999877    468999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      ||||++|+|.+++.+..+++.++..++.||+.||+|||++        +||||||||+||||+.++.+||+|||+|+.+.
T Consensus       150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~--------~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  221 (346)
T 4fih_A          150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS  221 (346)
T ss_dssp             ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence            9999999999999989999999999999999999999999        99999999999999999999999999998775


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    ....+||+.|||||++.+.      .|+.++|||||||++|||++|          ..||.+.     ...
T Consensus       222 ~~~~~----~~~~~GTp~YmAPEvl~~~------~y~~~~DiWSlGvilyeml~G----------~~PF~~~-----~~~  276 (346)
T 4fih_A          222 KEVPR----RKSLVGTPYWMAPELISRL------PYGPEVDIWSLGIMVIEMVDG----------EPPYFNE-----PPL  276 (346)
T ss_dssp             SSSCC----BCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTS-----CHH
T ss_pred             CCCCc----ccccccCcCcCCHHHHCCC------CCCcHHHHHHHHHHHHHHHHC----------CCCCCCc-----CHH
Confidence            43322    2456899999999999876      778999999999999999999          7788653     223


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +....+.. ...+.++.   ...+++++.+||.+||+.||++|||+.|+++
T Consensus       277 ~~~~~i~~-~~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          277 KAMKMIRD-NLPPRLKN---LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHH-SSCCCCSC---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHc-CCCCCCCc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            33333322 22222221   2346788999999999999999999999876

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.1e-56  Score=436.86  Aligned_cols=262  Identities=22%  Similarity=0.393  Sum_probs=210.1

Q ss_pred             hhhhccccccceeeeecCeEEEEEEECC-------ceeEEEEeeccCccc--hHHHHHHHHHHhccC-CCceeeeeeccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEAS--WSRETEIYSTVLLRH-ENILGYIGSDMT  201 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-------~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H-~nIv~l~g~~~~  201 (443)
                      +...++|++.+.||+|+||+||+|.+.+       +.||||++.......  .....|+..+..++| ||||+++|+|..
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            4456789999999999999999998742       579999986543322  223456666655755 899999999876


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEE
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAH  264 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiH  264 (443)
                      ..   ..++||||||++|+|.++|+.                 ..+++.+++.++.|||+||+|||++        +|||
T Consensus       140 ~~---~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--------~iiH  208 (353)
T 4ase_A          140 PG---GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--------KCIH  208 (353)
T ss_dssp             TT---SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--------TCCC
T ss_pred             cC---CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--------Ceec
Confidence            53   247999999999999999953                 2389999999999999999999999        9999


Q ss_pred             eCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHH
Q psy14889        265 RDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV  344 (443)
Q Consensus       265 rDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~el  344 (443)
                      |||||+|||+++++.+||+|||+|+.+.......  ......||+.|||||++.+.      .|+.++|||||||+||||
T Consensus       209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~--~~~~~~gt~~ymAPE~l~~~------~y~~ksDVwS~Gv~l~El  280 (353)
T 4ase_A          209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDR------VYTIQSDVWSFGVLLWEI  280 (353)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSE--EETTEEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHH
T ss_pred             CccCccceeeCCCCCEEECcchhhhhcccCCCce--eeccccccccccCHHHHhcC------CCCCcccEeehHHHHHHH
Confidence            9999999999999999999999998765432211  12345799999999999887      788999999999999999


Q ss_pred             Hh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        345 CR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       345 lt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +| |          ..||.+..    ..+.+.+.+. ...++..|     +.+++++.++|.+||+.||++|||+.||++
T Consensus       281 ~t~G----------~~Pf~~~~----~~~~~~~~i~-~g~~~~~p-----~~~~~~~~~li~~c~~~dP~~RPt~~eil~  340 (353)
T 4ase_A          281 FSLG----------ASPYPGVK----IDEEFCRRLK-EGTRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVE  340 (353)
T ss_dssp             TTTS----------CCSSTTCC----CSHHHHHHHH-HTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCC----------CCCCCCCC----HHHHHHHHHH-cCCCCCCC-----ccCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            98 7          77887642    2233444433 33455555     346778999999999999999999999999


Q ss_pred             HHHHHhhcc
Q psy14889        424 TLIKLACAD  432 (443)
Q Consensus       424 ~L~~l~~~~  432 (443)
                      .|+++.++.
T Consensus       341 ~L~~llq~~  349 (353)
T 4ase_A          341 HLGNLLQAN  349 (353)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999998764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=8e-56  Score=426.18  Aligned_cols=257  Identities=19%  Similarity=0.204  Sum_probs=203.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +.|.+.++||+|+||+||+|++  +|+.||||++.....  .  ..|+..+..++|||||++++++.+.    ..+||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~--~~E~~il~~l~HpnIV~l~~~~~~~----~~~~ivm  129 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--R--VEELVACAGLSSPRIVPLYGAVREG----PWVNIFM  129 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--C--THHHHTTTTCCCTTBCCEEEEEEET----TEEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--H--HHHHHHHHhCCCCCCCcEEEEEEEC----CEEEEEE
Confidence            5688899999999999999998  589999999865322  2  2355566669999999999999876    4689999


Q ss_pred             cccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~  291 (443)
                      |||++|+|.+++++ +.+++.++..++.||+.||+|||++        +||||||||+||||+.++ .+||+|||+|+.+
T Consensus       130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~--------~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--------RILHGDVKADNVLLSSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT--------TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence            99999999999965 6799999999999999999999998        999999999999999987 6999999999877


Q ss_pred             cccCCcCC-CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMD-IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ........ ......+||+.|||||++.+.      .|+.++|||||||++|||+||          ..||.+.....  
T Consensus       202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~------~y~~~~DiwSlGvilyemltG----------~~Pf~~~~~~~--  263 (336)
T 4g3f_A          202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGK------PCDAKVDIWSSCCMMLHMLNG----------CHPWTQYFRGP--  263 (336)
T ss_dssp             ------------CCCCCCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCSSTTTCCSC--
T ss_pred             cCCCcccceecCCccccCccccCHHHHCCC------CCCcHHHHHHHHHHHHHHHHC----------cCCCCCCCHHH--
Confidence            64322211 122345799999999999876      778899999999999999999          77776643221  


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                        .+.++.........+     +..+++++.+||.+||+.||++|||+.|+++.|.++.+...
T Consensus       264 --~~~~i~~~~~~~~~~-----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          264 --LCLKIASEPPPIREI-----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             --CHHHHHHSCCGGGGS-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             --HHHHHHcCCCCchhc-----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence              122222111111112     23467889999999999999999999999999988776543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.7e-56  Score=429.73  Aligned_cols=245  Identities=25%  Similarity=0.386  Sum_probs=195.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++......   ......|+..+..++|||||++++++.+.    ..+|
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~----~~~y   99 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN----GSLY   99 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC----CEEE
Confidence            6899999999999999999998  5899999998654322   22334677777779999999999999876    4689


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ||||||++|+|.+++..   ..+++.+++.++.||+.||+|||++        +||||||||+||||+.++.+||+|||+
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~--------~IiHRDlKp~NILl~~~g~vKl~DFGl  171 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR--------KILHRDIKSQNIFLTKDGTVQLGDFGI  171 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCCHHHEEECCCCCEEEccccc
Confidence            99999999999999953   3478999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+......    ....+||+.|||||++.+.      .|+.++|||||||+||||+||          ..||.+.   
T Consensus       172 a~~~~~~~~~----~~~~~GT~~YmAPE~l~~~------~y~~~~DiwSlGvilyemltG----------~~PF~~~---  228 (350)
T 4b9d_A          172 ARVLNSTVEL----ARACIGTPYYLSPEICENK------PYNNKSDIWALGCVLYELCTL----------KHAFEAG---  228 (350)
T ss_dssp             ESCCCHHHHH----HHHHHSCCTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCSCCCS---
T ss_pred             ceeecCCccc----ccccCCCccccCHHHHCCC------CCCcHHHHHHHHHHHHHHHHC----------CCCCCCc---
Confidence            9876543211    1235799999999999876      778899999999999999999          7788653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        +..++...+... ..+..+     ..++.++.+||.+||+.||++|||+.|+++
T Consensus       229 --~~~~~~~~i~~~-~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          229 --SMKNLVLKIISG-SFPPVS-----LHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             --SHHHHHHHHHHT-CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CHHHHHHHHHcC-CCCCCC-----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              233333333222 222232     346678999999999999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-55  Score=416.11  Aligned_cols=248  Identities=24%  Similarity=0.390  Sum_probs=195.6

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |.+.+.||+|+||+||+|.+  ++..||||++......   ......|+..+..++|||||++++++.+.......++||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            46778899999999999998  5889999998654322   222346777777799999999999987643333568999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla~~  290 (443)
                      ||||++|+|.+++++ ..+++..+..++.||+.||+|||++      .++||||||||+||||+. ++.+||+|||+|+.
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~------~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR------TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS------SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC------CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence            999999999999965 6799999999999999999999998      224999999999999985 78999999999975


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .....      ..+.+||+.|||||++.+       .|+.++|||||||++|||+||          ..||.+..    .
T Consensus       182 ~~~~~------~~~~~GTp~YmAPE~~~~-------~y~~~~DiwSlGvilyelltg----------~~Pf~~~~----~  234 (290)
T 3fpq_A          182 KRASF------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATS----------EYPYSECQ----N  234 (290)
T ss_dssp             CCTTS------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHS----------SCTTTTCS----S
T ss_pred             CCCCc------cCCcccCccccCHHHcCC-------CCCcHHHHHHHHHHHHHHHHC----------CCCCCCCC----c
Confidence            43221      234589999999998864       567899999999999999999          77886531    2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+...+......+.++     ...++++.+||.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~i~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          235 AAQIYRRVTSGVKPASFD-----KVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHTTTCCCGGGG-----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCCCCCCC-----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            333444333222111121     234567999999999999999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.6e-55  Score=433.01  Aligned_cols=248  Identities=26%  Similarity=0.383  Sum_probs=204.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .+.|++.+.||+|+||.||+|++  +|+.||||++...... ......|+..+..++|||||++++++.+.    ..+||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----~~~~i  225 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DELWV  225 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET----TEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC----CEEEE
Confidence            36799999999999999999998  5899999998654332 22334566666669999999999999876    46899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||||++|+|.++++...+++.++..++.||+.||+|||++        +||||||||+||||+.++.+||+|||+|+.+
T Consensus       226 VmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~--------~IiHRDiKp~NILl~~~g~vKl~DFGla~~~  297 (423)
T 4fie_A          226 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV  297 (423)
T ss_dssp             EEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC--------CeecccCCHHHEEEcCCCCEEEecCccceEC
Confidence            99999999999999988999999999999999999999999        9999999999999999999999999999877


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    ....+||+.|||||++.+.      .|+.++|||||||++|||++|          ..||.+.     ..
T Consensus       298 ~~~~~~----~~~~~GTp~YmAPEvl~~~------~y~~~~DiWSlGvilyeml~G----------~~PF~~~-----~~  352 (423)
T 4fie_A          298 SKEVPR----RKSLVGTPYWMAPELISRL------PYGPEVDIWSLGIMVIEMVDG----------EPPYFNE-----PP  352 (423)
T ss_dssp             CSSCCC----BCCCEECTTTCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTS-----CH
T ss_pred             CCCCcc----ccccccCcCcCCHHHHCCC------CCCcHHHHHHHHHHHHHHHHC----------CCCCCCc-----CH
Confidence            543322    2456899999999999876      778999999999999999999          7788653     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......+... ..+.++.   ...++.++.+||.+||+.||++|||+.|+++
T Consensus       353 ~~~~~~i~~~-~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          353 LKAMKMIRDN-LPPRLKN---LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHHHS-CCCCCSC---TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHcC-CCCCCcc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            3333333222 2222221   2346678999999999999999999999886

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.9e-55  Score=418.75  Aligned_cols=246  Identities=22%  Similarity=0.294  Sum_probs=202.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++....    ........|+..+..++|||||++++++.+.    ..+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~~  107 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----EKL  107 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----CEE
Confidence            6799999999999999999998  68999999986432    2222334566667779999999999999876    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |||||||++|+|.+++.+ +.+++.++..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|
T Consensus       108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~--------~IiHRDlKPeNILl~~~g~vKl~DFGla  179 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK--------GIIHRDLKPENILLNEDMHIQITDFGTA  179 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCHHHeEEcCCCCEEEEEcCCc
Confidence            999999999999999965 6899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+......  ....+.+||+.|||||++.+.      .|+.++||||+||++|||+||          ..||.+.    
T Consensus       180 ~~~~~~~~~--~~~~~~~GTp~YmAPEvl~~~------~y~~~~DiWSlGvilyeml~G----------~~PF~~~----  237 (311)
T 4aw0_A          180 KVLSPESKQ--ARANSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAG----------LPPFRAG----  237 (311)
T ss_dssp             EECCTTTTC--CCBCCCCSCGGGCCHHHHHHS------CBCHHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             eecCCCCCc--ccccCcccCcccCCHHHHcCC------CCCcHHHHHHHHHHHHHHHhC----------CCCCCCC----
Confidence            877543221  123456899999999999876      677899999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       +..++...+...  ...+|.     ..++++++|+.+||+.||++|||++|++.
T Consensus       238 -~~~~~~~~i~~~--~~~~p~-----~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          238 -NEGLIFAKIIKL--EYDFPE-----KFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             -SHHHHHHHHHHT--CCCCCT-----TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             -CHHHHHHHHHcC--CCCCCc-----ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence             333333333222  233442     35678999999999999999999998743

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=5.3e-54  Score=403.20  Aligned_cols=243  Identities=23%  Similarity=0.356  Sum_probs=186.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++....    ......+.|+..+..++|||||++++++.+.    ..+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~~   88 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK----DEI   88 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----CEE
Confidence            6899999999999999999997  58999999986532    1122335666677779999999999998876    468


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||||+ +|+|.+++. +..+++.++..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~--------~IiHRDiKP~NILl~~~~~vkl~DFGla  159 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH--------KIVHRDLKPENLLLDEHLNVKIADFGLS  159 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred             EEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCChHHeEECCCCCEEEeecCCC
Confidence            9999999 579999885 46899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......     ..+.+||+.|||||++.+..     .++.++||||+||++|||+||          ..||.+.    
T Consensus       160 ~~~~~~~~-----~~~~~GT~~Y~APE~~~~~~-----y~~~~~DiwSlGvily~lltg----------~~PF~~~----  215 (275)
T 3hyh_A          160 NIMTDGNF-----LKTSCGSPNYAAPEVISGKL-----YAGPEVDVWSCGVILYVMLCR----------RLPFDDE----  215 (275)
T ss_dssp             --------------------CTTSCHHHHSSSS-----CCCTHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             eecCCCCc-----cCCeeECcccCChhhhcCCC-----CCCChhhhHHHHHHHHHHHHC----------CCCCCCC----
Confidence            76654221     23468999999999998762     124799999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ....+.+.+..  ..+.+|     ..+++++.+|+.+||+.||++|||++|+++
T Consensus       216 -~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          216 -SIPVLFKNISN--GVYTLP-----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -SHHHHHHHHHH--TCCCCC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -CHHHHHHHHHc--CCCCCC-----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence             33444443332  223333     235678999999999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.7e-54  Score=412.02  Aligned_cols=244  Identities=22%  Similarity=0.344  Sum_probs=193.7

Q ss_pred             ccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||+||+|+.     +++.||||++....   ......+.|+..+..++|||||++++++.+.    .
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~   99 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE----G   99 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET----T
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----C
Confidence            6899999999999999999986     36789999986432   1222334566666669999999999999876    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|||||||++|+|.+++.+ ..+++.++..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~--------~IiHRDlKp~NILl~~~g~vKl~DFG  171 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL--------GIIYRDLKPENILLDEEGHIKLTDFG  171 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSSCCGGGEEECTTSCEEEESSE
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcCCCCCHHHeEEcCCCCEEecccc
Confidence            68999999999999999965 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +|+........    ..+.+||+.|||||++.+.      .|+.++|||||||++|||+||          ..||.+.  
T Consensus       172 la~~~~~~~~~----~~~~~GT~~YmAPE~~~~~------~y~~~~DiwSlGvilyemltG----------~~PF~~~--  229 (304)
T 3ubd_A          172 LSKESIDHEKK----AYSFCGTVEYMAPEVVNRR------GHTQSADWWSFGVLMFEMLTG----------TLPFQGK--  229 (304)
T ss_dssp             EEEC-----CC----CCSCCCCGGGCCHHHHHTS------CCCTHHHHHHHHHHHHHHHHS----------SCSSCCS--
T ss_pred             cceeccCCCcc----ccccccCcccCCHHHhccC------CCCCCCcccchHHHHHHHHhC----------CCCCCCc--
Confidence            99865432221    2456899999999999876      777899999999999999999          7788653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH-----HHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA-----LRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~  423 (443)
                         +..++...+..  ..+.+|     ..+++++.+|+.+||+.||++|||+     +|+++
T Consensus       230 ---~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          230 ---DRKETMTMILK--AKLGMP-----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             ---SHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             ---CHHHHHHHHHc--CCCCCC-----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence               23333333322  223333     2366789999999999999999984     56654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.5e-53  Score=404.54  Aligned_cols=297  Identities=69%  Similarity=1.189  Sum_probs=250.1

Q ss_pred             hhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.+.++|++.+.||+|+||.||+|.++++.||||++..........|.++.....++||||+++++++.........+++
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            34558999999999999999999999999999999977766667778888877778999999999998765544467899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++|+|.++++...+++..++.++.|++.||+|||+..++.....+|+||||||+|||++.++.+||+|||+++..
T Consensus        84 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH  163 (301)
T ss_dssp             EECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             ehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence            99999999999999988999999999999999999999932111111239999999999999999999999999999876


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ...............||+.|+|||++.+......+.++.++|||||||++|||+||..+.+....+..||.+..+.....
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~  243 (301)
T 3q4u_A          164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF  243 (301)
T ss_dssp             ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence            65444333333455899999999999876332222344689999999999999999888888888899999888777778


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ..+.........++..+..+....++..+.+|+.+||+.||++|||+.+|++.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            888887777777888887777778899999999999999999999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-52  Score=406.25  Aligned_cols=319  Identities=63%  Similarity=1.077  Sum_probs=264.0

Q ss_pred             hhcccCCCCCCCchHHHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCcee
Q psy14889        115 DASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG  194 (443)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~  194 (443)
                      ..+..+.+....+......+.++|++.+.||+|+||.||+|+++++.||||++..........|.++.....++||||++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~   95 (337)
T 3mdy_A           16 EQSQSSGSGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG   95 (337)
T ss_dssp             HHHHHHCSCSSSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred             cccccCCCCCCCCcccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeee
Confidence            33334445566777888888899999999999999999999999999999999776666667777777776679999999


Q ss_pred             eeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       195 l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      +++++.........+++||||+++|+|.++++...+++..++.++.|++.||.|||+..+...++++|+||||||+|||+
T Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill  175 (337)
T 3mdy_A           96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV  175 (337)
T ss_dssp             EEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred             EEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence            99998876554457899999999999999999889999999999999999999999875555556699999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcc
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF  354 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~  354 (443)
                      +.++.+||+|||+++.+...............||+.|+|||++.+.........+.++|||||||++|||+||+.+++..
T Consensus       176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~  255 (337)
T 3mdy_A          176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV  255 (337)
T ss_dssp             CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence            99999999999999776654443333334568999999999998763321111122499999999999999999988888


Q ss_pred             cccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       355 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      .....||....+.................++..+..+....++.++.+|+.+||+.||++|||+.++++.|+++.++..
T Consensus       256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             ccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            8889999998887778888888777777777777777677899999999999999999999999999999999998653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.2e-52  Score=400.26  Aligned_cols=251  Identities=22%  Similarity=0.361  Sum_probs=182.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCc------
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNS------  205 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~------  205 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++.......  .....|+..+..++|||||++++++.+....      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4699999999999999999998  58999999986543322  2335677777789999999999998765421      


Q ss_pred             --ccEEEeeecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc
Q psy14889        206 --CTQLWLVTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT  279 (443)
Q Consensus       206 --~~~~~lv~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~  279 (443)
                        ...+|+|||||++|+|.++++..    ..++..++.++.||+.||+|||++        +|+||||||+|||++.++.
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~--------~IiHRDlKp~NILl~~~~~  156 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK--------GLMHRDLKPSNIFFTMDDV  156 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC--------cCccccCcHHHeEECCCCc
Confidence              13579999999999999999753    345667889999999999999999        9999999999999999999


Q ss_pred             EEEEecCCcccccccCCcCC--------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMD--------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +||+|||+|+.+........        ...++.+||+.|||||++.+.      .|+.++|||||||++|||++     
T Consensus       157 vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~------~y~~~~DiwSlGvilyell~-----  225 (299)
T 4g31_A          157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN------SYSHKVDIFSLGLILFELLY-----  225 (299)
T ss_dssp             EEECCCCCC--------------------------CCCTTSCHHHHTTC------CCCTHHHHHHHHHHHHHHHS-----
T ss_pred             EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC------CCCCHHHHHHHHHHHHHHcc-----
Confidence            99999999987765332211        112345799999999999876      77899999999999999985     


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                              ||...      .+..........  ...|..  ....++.+.+|+.+||+.||++|||+.|+++
T Consensus       226 --------Pf~~~------~~~~~~~~~~~~--~~~p~~--~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          226 --------PFSTQ------MERVRTLTDVRN--LKFPPL--FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             --------CCSSH------HHHHHHHHHHHT--TCCCHH--HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------CCCCc------cHHHHHHHHHhc--CCCCCC--CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                    44321      111211111111  112211  1223456789999999999999999999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=4.9e-51  Score=397.63  Aligned_cols=324  Identities=62%  Similarity=1.052  Sum_probs=263.9

Q ss_pred             hhHHhhhhcccCCCCCCCchHHHhhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhcc
Q psy14889        109 TLREYLDASLTSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR  188 (443)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~  188 (443)
                      ++.........+++....+......+.++|.+.+.||+|+||.||+|+++|+.||||++..........|.++.....++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~   94 (342)
T 1b6c_B           15 TLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR   94 (342)
T ss_dssp             CHHHHHHHTCCTTCCSSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCC
T ss_pred             chhheeeeccccCCCCCCceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcC
Confidence            44555666666777788899999999999999999999999999999999999999999776666666677777766689


Q ss_pred             CCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCC
Q psy14889        189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIK  268 (443)
Q Consensus       189 H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk  268 (443)
                      ||||+++++++.........+++||||+++|+|.+++.+..+++..++.++.|++.||.|||+......+..+|+|||||
T Consensus        95 h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  174 (342)
T 1b6c_B           95 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  174 (342)
T ss_dssp             CTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred             CCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence            99999999998877543346899999999999999999889999999999999999999999321111112299999999


Q ss_pred             CCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcc
Q psy14889        269 SKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT  348 (443)
Q Consensus       269 ~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~  348 (443)
                      |+|||++.++.+||+|||++..................||+.|+|||++.+......+.++.++||||||+++|||+||+
T Consensus       175 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~  254 (342)
T 1b6c_B          175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  254 (342)
T ss_dssp             GGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             HHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhcc
Confidence            99999999999999999999776544322221234557999999999997653322112336899999999999999998


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      .+.+.......||............+...+.....++.++..+....++..+.+|+.+||+.||++|||+.+|++.|+++
T Consensus       255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            77766667788998877666677777777666666777776666677889999999999999999999999999999999


Q ss_pred             hhcc
Q psy14889        429 ACAD  432 (443)
Q Consensus       429 ~~~~  432 (443)
                      .+..
T Consensus       335 ~~~~  338 (342)
T 1b6c_B          335 SQQE  338 (342)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            8754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-50  Score=400.28  Aligned_cols=261  Identities=20%  Similarity=0.296  Sum_probs=195.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccC--Cccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSR--NSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~--~~~~  207 (443)
                      .++|++.+.||+|+||+||+|++  +|+.||||++.......   ....+|+..+..++|||||++++++....  ....
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            36799999999999999999998  69999999986543221   12235666677799999999999876532  1224


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|||||||+ |+|.+++.+ +.+++.++..++.||+.||.|||++        +||||||||+|||++.++.+||+|||
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~--------~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA--------QVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------cCcCCCcCccccccCCCCCEEEeecc
Confidence            6899999996 689999864 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +|+.+............+.+||+.|||||++.+..     .++.++||||+||++|||++|          ..||.+.. 
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~-----~~~~~~DiWSlG~il~ell~G----------~~pF~g~~-  267 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH-----EYTQAIDLWSVGCIFGEMLAR----------RQLFPGKN-  267 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTCS-----CCCTHHHHHHHHHHHHHHHHT----------SCSSCCSS-
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCCC-----CCCChhheehhHHHHHHHHHC----------CCCCCCCC-
Confidence            99877544333333345678999999999987652     456899999999999999999          56665421 


Q ss_pred             CCCChHHHHhhhhhcCC---------------------CCCCCCCC--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQ---------------------RPVLPNRW--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ..+.+..+......                     .+..+..|  .....+.++.+||.+||..||++|||+.|+++
T Consensus       268 ---~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          268 ---YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             ---HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence               11222222111110                     00001000  01124567999999999999999999999886

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=3.4e-50  Score=389.05  Aligned_cols=293  Identities=38%  Similarity=0.690  Sum_probs=232.6

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||+|++.++.||||++..........+.|+..+..++||||+++++++.........+++||||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             hhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence            68999999999999999999999999999999776666666677888887899999999999998765544668999999


Q ss_pred             cCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh--cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        216 HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF--GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       216 ~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~--~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      +++|+|.++++...+++..+..++.|++.||.|||+...  ...+.++|+||||||+|||++.++.+||+|||+++.+..
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~  183 (322)
T 3soc_A          104 HEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA  183 (322)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECT
T ss_pred             CCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccccc
Confidence            999999999998889999999999999999999996510  011133899999999999999999999999999987654


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc-ccccCCCCCCCCCCCCChH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI-FEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~-~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....  .......||+.|+|||++.+..... ..++.++|||||||++|||+||+.|+.. ......||.......+...
T Consensus       184 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  260 (322)
T 3soc_A          184 GKSA--GDTHGQVGTRRYMAPEVLEGAINFQ-RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE  260 (322)
T ss_dssp             TSCC--CCCTTCCCCGGGCCHHHHTTCCCCC-HHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHH
T ss_pred             ccCc--cccccCccCccccCHhhcccccccC-cCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchh
Confidence            3322  1223457999999999997642211 1345688999999999999999665431 1122333333223344555


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      .+...+.....++.++..+....++.++.+|+.+||+.||++|||+.||++.|+++.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            66666666666777776666677888899999999999999999999999999998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.9e-49  Score=384.22  Aligned_cols=196  Identities=21%  Similarity=0.374  Sum_probs=158.0

Q ss_pred             hhccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.+.|++.+.||+|+||+||+|+.     +++.||||++..... ......|+..+..+ +|||||++++++.+.    .
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~----~   93 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-PIRIAAELQCLTVAGGQDNVMGVKYCFRKN----D   93 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-HHHHHHHHHHHHHTCSBTTBCCCSEEEEET----T
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-HHHHHHHHHHHHHhcCCCCCceEEEEEEEC----C
Confidence            457899999999999999999986     257899998865432 22233455544445 799999999998876    4


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~DfG  286 (443)
                      .+++||||+++|+|.++++  .+++.++..++.||+.||+|||++        +|+||||||+|||++.+ +.+||+|||
T Consensus        94 ~~~lvmE~~~g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH~~--------gIiHRDiKPeNiLl~~~~~~~kl~DFG  163 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILN--SLSFQEVREYMLNLFKALKRIHQF--------GIVHRDVKPSNFLYNRRLKKYALVDFG  163 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             EEEEEEeCCCcccHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence            6899999999999999985  599999999999999999999999        99999999999999887 799999999


Q ss_pred             CcccccccCCcC------------------------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHH
Q psy14889        287 LAVSYSQLSNKM------------------------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW  342 (443)
Q Consensus       287 la~~~~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~  342 (443)
                      +|+.........                        .......+||+.|||||++.+..     .++.++||||+||++|
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~y~~~~DiWSlG~il~  238 (361)
T 4f9c_A          164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCP-----NQTTAIDMWSAGVIFL  238 (361)
T ss_dssp             TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCS-----CCCTHHHHHHHHHHHH
T ss_pred             CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC-----CCCCccchhhhHHHHH
Confidence            997654321100                        01123457999999999997652     4668999999999999


Q ss_pred             HHHhccc
Q psy14889        343 EVCRRTK  349 (443)
Q Consensus       343 elltg~~  349 (443)
                      ||+||+.
T Consensus       239 ell~G~~  245 (361)
T 4f9c_A          239 SLLSGRY  245 (361)
T ss_dssp             HHHHTCS
T ss_pred             HHHHCCC
Confidence            9999943

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.7e-48  Score=403.57  Aligned_cols=248  Identities=17%  Similarity=0.314  Sum_probs=200.8

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|+.  +|+.||+|++...... ......|+..+..++|||||++++++.+.    ..++|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----~~~~i  231 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD----NEMVM  231 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS----SEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----CEEEE
Confidence            36899999999999999999998  6899999998664432 22234566666779999999999999876    56899


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC--CcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN--GTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGl  287 (443)
                      |||||++|+|.+++.+  ..+++.++..++.||+.||.|||++        +|+||||||+|||++.+  +.+||+|||+
T Consensus       232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~--------~iiHRDlKp~Nill~~~~~~~vKl~DFG~  303 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN--------NYVHLDLKPENIMFTTKRSNELKLIDFGL  303 (573)
T ss_dssp             EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred             EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeccCChhhccccCCCCCCEEEeeccc
Confidence            9999999999999853  5799999999999999999999999        99999999999999865  7999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+......     ...+||+.|||||++.+.      .|+.++|||||||++|||++|          ..||.+.   
T Consensus       304 a~~~~~~~~~-----~~~~GT~~y~APEv~~~~------~y~~~~DiWSlGvilyeml~G----------~~Pf~~~---  359 (573)
T 3uto_A          304 TAHLDPKQSV-----KVTTGTAEFAAPEVAEGK------PVGYYTDMWSVGVLSYILLSG----------LSPFGGE---  359 (573)
T ss_dssp             CEECCTTSEE-----EEECSSGGGCCHHHHTTC------CBCHHHHHHHHHHHHHHHHHS----------CCSSCCS---
T ss_pred             eeEccCCCce-----eeeEECccccCHHHhCCC------CCCcHHHHHHHHHHHHHHHHC----------CCCCCCc---
Confidence            9877543221     335799999999999886      777899999999999999999          7788653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ...+....+...  ...++.. ....+++++.+||.+||+.||++|||+.|+++
T Consensus       360 --~~~~~~~~i~~~--~~~~~~~-~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          360 --NDDETLRNVKSC--DWNMDDS-AFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             --SHHHHHHHHHTT--CCCCCSG-GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHhC--CCCCCcc-cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              223333333221  1122211 11235678999999999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.5e-48  Score=401.01  Aligned_cols=246  Identities=26%  Similarity=0.385  Sum_probs=197.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHH-HHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEI-YSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei-~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++.+..      ......|..+ ..+..++|||||++++++.+.    
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~----  264 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP----  264 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS----
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC----
Confidence            5799999999999999999998  68999999986432      1222334333 344457999999999999887    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+|||||||++|+|.++|.+ +.+++..+..++.||+.||+|||++        +||||||||+||||+.+|++||+||
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~--------gIiHRDLKPeNILld~~G~vKL~DF  336 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR--------FVVYRDLKPANILLDEHGHVRISDL  336 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCchHHeEEeCCCCEEeccc
Confidence            468999999999999999965 6799999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|+.+....      ..+.+||+.|||||++..+.     .|+.++|||||||++|||++|          ..||.+..
T Consensus       337 GlA~~~~~~~------~~t~~GTp~YmAPEvl~~~~-----~y~~~vDiWSLGvilYEmLtG----------~~PF~~~~  395 (689)
T 3v5w_A          337 GLACDFSKKK------PHASVGTHGYMAPEVLQKGV-----AYDSSADWFSLGCMLFKLLRG----------HSPFRQHK  395 (689)
T ss_dssp             TTCEECSSCC------CCSCCSCGGGCCHHHHSTTC-----CCCTHHHHHHHHHHHHHHHHS----------SCTTCGGG
T ss_pred             ceeeecCCCC------CCCccCCcCccCHHHHhCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            9998765422      24568999999999997541     567899999999999999999          77886532


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                      ..  ....+...+..  ....+|     ..++.++.+||.+||+.||++|++     ++||++
T Consensus       396 ~~--~~~~i~~~i~~--~~~~~p-----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          396 TK--DKHEIDRMTLT--MAVELP-----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CC--CHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             hH--HHHHHHHhhcC--CCCCCC-----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            21  22233332222  223333     335678999999999999999998     677765

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=5.2e-47  Score=364.57  Aligned_cols=257  Identities=29%  Similarity=0.505  Sum_probs=199.7

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|+++|+.||||++.......   .....|+..+..++||||+++++++.+..    .+++
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~l  111 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP----NLSI  111 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT----CCEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----ceEE
Confidence            4789999999999999999999999999999986543221   12245666666799999999999987764    4699


Q ss_pred             eecccCcccHHHHhcccC----CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC--eEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        212 VTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA--IAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~----l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~--iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ||||+++|+|.+++....    +++..++.++.|++.||+|||+.        +  |+||||||+|||++.++.+||+||
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~~~ivH~Dikp~NIll~~~~~~kL~Df  183 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR--------NPPIVHRNLKSPNLLVDKKYTVKVCDF  183 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS--------SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCCEECCCCChhhEEEeCCCcEEECCC
Confidence            999999999999997543    99999999999999999999998        7  999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.......    ......||+.|+|||++.+.      .++.++||||||+++|||++|          ..||... 
T Consensus       184 g~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~elltg----------~~Pf~~~-  242 (309)
T 3p86_A          184 GLSRLKASTFL----SSKSAAGTPEWMAPEVLRDE------PSNEKSDVYSFGVILWELATL----------QQPWGNL-  242 (309)
T ss_dssp             C---------------------CCTTSCHHHHTTC------CCCTTHHHHHHHHHHHHHHHC----------CCTTTTS-
T ss_pred             CCCcccccccc----ccccCCCCccccChhhhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC-
Confidence            99975443221    12345799999999999876      667899999999999999999          7777654 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                          ........+.........+     ..++.++.+|+.+||+.||++|||+.++++.|+.+.+...
T Consensus       243 ----~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          243 ----NPAQVVAAVGFKCKRLEIP-----RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             ----CHHHHHHHHHHSCCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             ----CHHHHHHHHHhcCCCCCCC-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence                2233333333333444444     3366789999999999999999999999999999987543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=8.1e-47  Score=367.05  Aligned_cols=301  Identities=34%  Similarity=0.599  Sum_probs=223.1

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeecccc-CCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTS-RNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~-~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||.||+|+++++.||||++..........|.++..+..++||||+++++.+... ......+++|||
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   92 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME   92 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred             HHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEe
Confidence            7899999999999999999999999999999987766667777888777678999999999865421 111245789999


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh-cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF-GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~-~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.....++..+..++.||+.||.|||+... +....++|+||||||+|||++.++.+||+|||+++.+..
T Consensus        93 ~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~  172 (336)
T 3g2f_A           93 YYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG  172 (336)
T ss_dssp             CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeeccc
Confidence            9999999999988888999999999999999999997521 011234899999999999999999999999999987654


Q ss_pred             cCCc----CCCCCCCcccccCcccccccccccccC-cCCCCCccchHHHHHHHHHHHhcccCCCccc---ccCCCCCCCC
Q psy14889        294 LSNK----MDIPPNPRVGTKRYMSPEILDESINMD-CFESFKKADIYALGLVLWEVCRRTKANGIFE---EYKAPYHDLV  365 (443)
Q Consensus       294 ~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~---~~~~P~~~~~  365 (443)
                      ....    .........||+.|+|||++.+..... ...++.++|||||||++|||++|+.|+....   .....+....
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~  252 (336)
T 3g2f_A          173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV  252 (336)
T ss_dssp             SSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHH
T ss_pred             ccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhccc
Confidence            3211    111123457999999999997632110 0144578999999999999999954421110   0000000001


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCC-chhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVS-DSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                      ...+....+...+.....++.++..+.. ..++..+.+||.+||+.||++|||+.|+++.|+++...-.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             CCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence            1223344555555556666777665543 3467789999999999999999999999999999997665543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.7e-46  Score=357.50  Aligned_cols=248  Identities=26%  Similarity=0.427  Sum_probs=201.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||||++...... ......|+..+..++||||+++++++...    ..+++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~l   94 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWV   94 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC----CEEEE
Confidence            36899999999999999999986  6899999998654332 22334566666679999999999998876    45899


Q ss_pred             eecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        212 VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||||+++|+|.+++.+..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++...
T Consensus        95 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            99999999999999988999999999999999999999999        9999999999999999999999999999776


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....    ..
T Consensus       167 ~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~pf~~~~----~~  222 (297)
T 3fxz_A          167 TPEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEG----------EPPYLNEN----PL  222 (297)
T ss_dssp             CSTTCC----BCCCCSCGGGCCHHHHHCS------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTSC----HH
T ss_pred             CCcccc----cCCccCCcCccChhhhcCC------CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC----HH
Confidence            543322    2345799999999999876      677899999999999999999          77776531    11


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..........  .+...   .+..++..+.+++.+||+.||++|||+.|+++
T Consensus       223 ~~~~~~~~~~--~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          223 RALYLIATNG--TPELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHC--SCCCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHhCC--CCCCC---CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            2222222211  11111   12446778999999999999999999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.8e-46  Score=357.71  Aligned_cols=259  Identities=25%  Similarity=0.374  Sum_probs=201.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|.+.+.||+|+||.||+|.+  +++.||+|++...... ......|+..+..++||||+++++++.+.    ...++|
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~lv   85 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD----KRLNFI   85 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET----TEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC----CeeEEE
Confidence            6899999999999999999998  5889999987553322 22335667777779999999999998876    458999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++|+|.+++..  ..+++.++..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+++.
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  157 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM--------NIIHRDLNSHNCLVRENKNVVVADFGLARL  157 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCCcCeEEECCCCCEEEeeccccee
Confidence            999999999999975  6799999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCC----------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        291 YSQLSNKMD----------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       291 ~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      .........          .......||+.|+|||++.+.      .++.++||||||+++|||++|          ..|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~g----------~~~  221 (310)
T 3s95_A          158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR------SYDEKVDVFSFGIVLCEIIGR----------VNA  221 (310)
T ss_dssp             CC--------------------CCCCSCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHT----------CCS
T ss_pred             cccccccccccccccccccccccccCCCcceeCHHHhcCC------CCCcHHHHHHHHHHHHHHhcC----------CCC
Confidence            654322110          011245799999999999876      677899999999999999999          444


Q ss_pred             CCCCCCCCCChHH-HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        361 YHDLVPMDPSFDD-MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       361 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      |............ ...... ...    +     ..++..+.+++.+||+.||++|||+.++++.|+++....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~-~~~----~-----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          222 DPDYLPRTMDFGLNVRGFLD-RYC----P-----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             STTTSCBCTTSSBCHHHHHH-HTC----C-----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CcchhhhHHHHhhhhhcccc-ccC----C-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            4433221111111 111111 111    1     224456999999999999999999999999999987643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.5e-46  Score=362.42  Aligned_cols=266  Identities=23%  Similarity=0.337  Sum_probs=206.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ...++|.+.+.||+|+||.||+|.+.     +..||||++......  ......|+..+..++||||+++++++.+.   
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---  122 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG---  122 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG---
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence            34478999999999999999999982     345999998654322  22334567777779999999999998766   


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                       ...++||||+++|+|.++++.  ..+++.+++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+
T Consensus       123 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~  193 (325)
T 3kul_A          123 -RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL--------GYVHRDLAARNVLVDSNLVCKVS  193 (325)
T ss_dssp             -GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEEC
T ss_pred             -CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CeeCCCCCcceEEECCCCCEEEC
Confidence             347999999999999999954  5799999999999999999999999        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYH  362 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~  362 (443)
                      |||+++......... .......+|+.|+|||++.+.      .++.++||||||+++|||++ |          ..||.
T Consensus       194 Dfg~a~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~~g----------~~p~~  256 (325)
T 3kul_A          194 DFGLSRVLEDDPDAA-YTTTGGKIPIRWTAPEAIAFR------TFSSASDVWSFGVVMWEVLAYG----------ERPYW  256 (325)
T ss_dssp             CCSSCEECC----CC-EECC---CCGGGSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS----------CCTTT
T ss_pred             CCCcccccccCccce-eeccCCCCcccccCHhHhcCC------CCCcHHHHHHHHHHHHHHHcCC----------CCCcc
Confidence            999998765432211 112233567889999999766      56689999999999999999 7          77776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccccccCC
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIHCS  438 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~~~  438 (443)
                      ..     ........+... .....+     ..++..+.+|+.+||+.||++|||+.+|++.|+.+.......+.+
T Consensus       257 ~~-----~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~~  321 (325)
T 3kul_A          257 NM-----TNRDVISSVEEG-YRLPAP-----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRAT  321 (325)
T ss_dssp             TS-----CHHHHHHHHHTT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-----
T ss_pred             cC-----CHHHHHHHHHcC-CCCCCC-----CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccccc
Confidence            54     233333333222 222222     346678999999999999999999999999999999887665543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.8e-46  Score=366.22  Aligned_cols=256  Identities=22%  Similarity=0.423  Sum_probs=203.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      .++|.+.+.||+|+||.||+|.+.         +..||||++.......  .....|+..+..+ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            478999999999999999999862         3469999986543221  1234556666668 899999999998776


Q ss_pred             CCcccEEEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      .    .+++||||+++|+|.+++...                 .+++.+++.++.||+.||.|||+.        +|+||
T Consensus       160 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHr  227 (370)
T 2psq_A          160 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHR  227 (370)
T ss_dssp             S----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECS
T ss_pred             C----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--------Ceecc
Confidence            3    479999999999999999642                 478999999999999999999999        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......+|+.|+|||++.+.      .++.++|||||||++|||+
T Consensus       228 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslG~il~ell  299 (370)
T 2psq_A          228 DLAARNVLVTENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKWMAPEALFDR------VYTHQSDVWSFGVLMWEIF  299 (370)
T ss_dssp             CCCGGGEEECTTCCEEECCCSSCEETTCCCTTC--TTTTTTSCGGGCCHHHHHTC------CCCHHHHHHHHHHHHHHHH
T ss_pred             ccchhhEEECCCCCEEEccccCCcccCccccee--cccCCCcccceECHhHhcCC------CCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999998665432211  12334678899999999876      6778999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      | |          ..||.+.     ....+...+.. ..++..+     ..++.++.++|.+||+.||++|||+.|+++.
T Consensus       300 t~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          300 TLG----------GSPYPGI-----PVEELFKLLKE-GHRMDKP-----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TTS----------CCSSTTC-----CGGGHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCC----------CCCCCCC-----CHHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9 7          6677653     22333333322 2233333     3466789999999999999999999999999


Q ss_pred             HHHHhhc
Q psy14889        425 LIKLACA  431 (443)
Q Consensus       425 L~~l~~~  431 (443)
                      |+++...
T Consensus       359 L~~il~~  365 (370)
T 2psq_A          359 LDRILTL  365 (370)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.1e-46  Score=348.77  Aligned_cols=254  Identities=23%  Similarity=0.411  Sum_probs=207.7

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||.||+|.+ +++.||+|++............|+..+..++||||+++++++.+..    ..++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e   85 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFE   85 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEEEE
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----ceEEEEE
Confidence            6899999999999999999998 6788999999766544445566777777799999999999987763    4799999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||+++...
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA--------CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC--------CeecCCcchheEEEcCCCCEEecccccccccc
Confidence            9999999999964  4589999999999999999999999        99999999999999999999999999997664


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......   .....+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     ..
T Consensus       158 ~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~ll~~g----------~~p~~~~-----~~  213 (269)
T 4hcu_A          158 DDQYTS---STGTKFPVKWASPEVFSFS------RYSSKSDVWSFGVLMWEVFSEG----------KIPYENR-----SN  213 (269)
T ss_dssp             CHHHHS---TTSTTCCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTC-----CH
T ss_pred             cccccc---ccCcccccccCCHHHhcCC------CCCchhhhHHHHHHHHHHhcCC----------CCCCCCC-----CH
Confidence            432111   2334578889999999766      67789999999999999999 7          6677653     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ......+.. ...+..+     ...+..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       214 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          214 SEVVEDIST-GFRLYKP-----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-CccCCCC-----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            333333322 2222222     23567899999999999999999999999999999865

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.1e-45  Score=373.45  Aligned_cols=252  Identities=28%  Similarity=0.498  Sum_probs=204.4

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .++|++.+.||+|+||.||+|.++|+.||||+++... .......|+..+..++||||+++++++.....   .+++|||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv~e  267 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTE  267 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEEEE
Confidence            4689999999999999999999999999999986543 23334456666667999999999999876542   4799999


Q ss_pred             ccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        215 YHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       215 ~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |+++|+|.+++...   .+++..++.++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+++..
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--------NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence            99999999999753   379999999999999999999999        9999999999999999999999999999754


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ....       ....+|..|+|||++.+.      .++.++|||||||++|||+| |          ..||.....    
T Consensus       340 ~~~~-------~~~~~~~~y~aPE~~~~~------~~~~~sDvwslG~~l~el~t~g----------~~P~~~~~~----  392 (450)
T 1k9a_A          340 SSTQ-------DTGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFG----------RVPYPRIPL----  392 (450)
T ss_dssp             C-------------CCCTTTSCHHHHHSS------CCCHHHHHHHHHHHHHHHHTTT----------CCSSTTSCT----
T ss_pred             cccc-------cCCCCCcceeCHHHhcCC------CCCcHHHHHHHHHHHHHHHhCC----------CCCCCCCCH----
Confidence            3211       123578899999999876      67789999999999999998 7          677766422    


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                       .++...+. ...++..|     ..++..+.+||.+||+.||++|||+.++++.|+.+....
T Consensus       393 -~~~~~~i~-~~~~~~~p-----~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          393 -KDVVPRVE-KGYKMDAP-----DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             -TTHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             -HHHHHHHH-cCCCCCCC-----CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence             22222222 22333333     346788999999999999999999999999999988654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=4.3e-46  Score=368.10  Aligned_cols=256  Identities=23%  Similarity=0.363  Sum_probs=204.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++.......  .....|+..+..++||||+++++++....    .++
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~  188 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIY  188 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS----SCE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC----CcE
Confidence            46899999999999999999998  58899999886542211  12234555666699999999999997764    369


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+++|+|.++++.  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivHrDlkp~Nil~~~~~~~kl~DfG~s  260 (377)
T 3cbl_A          189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK--------CCIHRDLAARNCLVTEKNVLKISDFGMS  260 (377)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence            99999999999999965  4599999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........  .......++..|+|||.+.+.      .++.++|||||||++|||+| |          ..||...   
T Consensus       261 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~el~t~g----------~~p~~~~---  319 (377)
T 3cbl_A          261 REEADGVYA--ASGGLRQVPVKWTAPEALNYG------RYSSESDVWSFGILLWETFSLG----------ASPYPNL---  319 (377)
T ss_dssp             EECTTSEEE--CCSSCCEEEGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTS----------CCSSTTS---
T ss_pred             eecCCCcee--ecCCCCCCCcCcCCHhHhccC------CCCchhhHHHHHHHHHHHHhCC----------CCCCCCC---
Confidence            765432111  111223467789999999866      56689999999999999998 7          6777664   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                        ........+.. ..+...|     ..++..+.+||.+||+.||++|||+.++++.|+++...
T Consensus       320 --~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          320 --SNQQTREFVEK-GGRLPCP-----ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             --CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence              23344444332 2333333     33667899999999999999999999999999998753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.8e-45  Score=355.56  Aligned_cols=271  Identities=27%  Similarity=0.358  Sum_probs=208.8

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +...++|++.+.||+|+||.||+|.+ +|+.||||++....... ...+.|+..+..++||||+++++++....    ..
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~  110 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN----EM  110 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT----CC
T ss_pred             HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC----eE
Confidence            34568999999999999999999998 58999999876543322 23356677777799999999999987663    47


Q ss_pred             EeeecccCcccHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~-----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||+++|+|.+++...     .+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~kl~D  182 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--------AIIHRDVKSINILLDENFVPKITD  182 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCSTTEEECTTCCEEECC
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC--------CeecCCCCHHHEEECCCCCEEEee
Confidence            9999999999999999643     489999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++........  .......||+.|+|||++.+.      .++.++||||||+++|||++|          ..||...
T Consensus       183 fg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~g----------~~p~~~~  244 (321)
T 2qkw_B          183 FGISKKGTELDQT--HLSTVVKGTLGYIDPEYFIKG------RLTEKSDVYSFGVVLFEVLCA----------RSAIVQS  244 (321)
T ss_dssp             CTTCEECSSSSCC--CCBCCCEEETTTCCHHHHHHC------BCCTHHHHHHHHHHHHHHHHC----------CTTCSCS
T ss_pred             ccccccccccccc--ccccccCCCccccCHHHhcCC------CCCcccchHhHHHHHHHHHhC----------CCccccc
Confidence            9999765432211  112344689999999999776      667899999999999999999          5555543


Q ss_pred             CCCCCCh-HH-HHhhhhhcC----CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        365 VPMDPSF-DD-MRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       365 ~~~~~~~-~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      .+..... .. .........    ..+... ......++..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~  318 (321)
T 2qkw_B          245 LPREMVNLAEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE  318 (321)
T ss_dssp             SSSSCCCHHHHTHHHHTTTCCCSSSSSSCT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred             CcHHHHHHHHHhhhccccccHHHhcChhhc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence            3221111 11 001110000    011111 12235678899999999999999999999999999999886543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.3e-45  Score=347.54  Aligned_cols=249  Identities=27%  Similarity=0.495  Sum_probs=192.7

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccc-----hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS-----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~-----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+.++.||||++.......     .....|+..+..++||||+++++++.+..    ..+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~   82 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP----NLC   82 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC------CE
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----ceE
Confidence            689999999999999999999999999999886432211     22345556666699999999999988763    479


Q ss_pred             eeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC---eEEeCCCCCCEEEcC--------CCc
Q psy14889        211 LVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA---IAHRDIKSKNILVKT--------NGT  279 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~---iiHrDlk~~NiLl~~--------~~~  279 (443)
                      +||||+++|+|.++++...+++..+..++.|++.||.|||+.        +   |+||||||+|||++.        ++.
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~--------~~~~i~H~dikp~Nil~~~~~~~~~~~~~~  154 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE--------AIVPIIHRDLKSSNILILQKVENGDLSNKI  154 (271)
T ss_dssp             EEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHS--------SSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred             EEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CCCceeecCCchHHEEEecccccccccCcc
Confidence            999999999999999988999999999999999999999998        6   999999999999986        678


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||++........      ....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..
T Consensus       155 ~kl~Dfg~~~~~~~~~~------~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~~g----------~~  212 (271)
T 3dtc_A          155 LKITDFGLAREWHRTTK------MSAAGAYAWMAPEVIRAS------MFSKGSDVWSYGVLLWELLTG----------EV  212 (271)
T ss_dssp             EEECCCCC-------------------CCGGGSCHHHHHHC------CCSHHHHHHHHHHHHHHHHHC----------CC
T ss_pred             eEEccCCcccccccccc------cCCCCccceeCHHHhccC------CCCchhhHHHHHHHHHHHHhC----------CC
Confidence            99999999976543221      234689999999999876      667899999999999999999          77


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      ||...     ..................+     ..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus       213 p~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          213 PFRGI-----DGLAVAYGVAMNKLALPIP-----STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TTTTS-----CHHHHHHHHHTSCCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCC-----CHHHHHHhhhcCCCCCCCC-----cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            77653     2222222222222223333     34667899999999999999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.1e-45  Score=356.22  Aligned_cols=245  Identities=22%  Similarity=0.341  Sum_probs=199.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++.......   .....|+..+..++||||+++++++.+.    ..+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----~~~   89 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE----KTL   89 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC----CEE
Confidence            36899999999999999999998  68999999986543221   1223566666679999999999998766    458


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~--------~ivHrDlkp~NIll~~~~~~kl~DFG~a  161 (328)
T 3fe3_A           90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK--------RIVHRDLKAENLLLDADMNIKIADFGFS  161 (328)
T ss_dssp             EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECSTTCC
T ss_pred             EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeccCCCHHHEEEcCCCCEEEeeccCc
Confidence            99999999999999985 46799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCC-CCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFES-FKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ........     .....||+.|+|||++.+.      .+ +.++|||||||++|||++|          ..||.+.   
T Consensus       162 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~ell~g----------~~pf~~~---  217 (328)
T 3fe3_A          162 NEFTVGGK-----LDAFCGAPPYAAPELFQGK------KYDGPEVDVWSLGVILYTLVSG----------SLPFDGQ---  217 (328)
T ss_dssp             GGGSSSCG-----GGTTSSSGGGCCHHHHHTC------CCCSHHHHHHHHHHHHHHHHHS----------SCSSCCS---
T ss_pred             eecCCCCc-----cccccCCcceeCcccccCC------CcCCchhhhhhhHHHHHHHHhC----------CCCCCCC---
Confidence            76654322     2345799999999999876      33 3789999999999999999          7777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ....+...+....  ...|     ...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus       218 --~~~~~~~~i~~~~--~~~p-----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          218 --NLKELRERVLRGK--YRIP-----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             --SHHHHHHHHHHCC--CCCC-----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             --CHHHHHHHHHhCC--CCCC-----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              3344444433322  2223     2255679999999999999999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-45  Score=373.98  Aligned_cols=259  Identities=21%  Similarity=0.380  Sum_probs=209.9

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +...++|++.+.||+|+||.||+|.+ ++..||||++............|+..+..++||||+++++++...     .++
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~-----~~~  258 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIY  258 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----SCE
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC-----ccE
Confidence            34457899999999999999999999 477899999876554444455667777779999999999998632     368


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +||||+++|+|.++++.   ..+++..++.++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivHrDlkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--------NYIHRDLRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence            99999999999999974   3689999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.........   .....+|..|+|||++...      .++.++|||||||++|||+| |          ..||.+.  
T Consensus       331 a~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~t~g----------~~P~~~~--  389 (454)
T 1qcf_A          331 ARVIEDNEYTA---REGAKFPIKWTAPEAINFG------SFTIKSDVWSFGILLMEIVTYG----------RIPYPGM--  389 (454)
T ss_dssp             GGGBCCHHHHT---TCSSSSCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCSSTTC--
T ss_pred             ceEcCCCceec---cCCCcccccccCHHHhccC------CCCcHHHHHhHHHHHHHHHhCC----------CCCCCCC--
Confidence            98765322111   1233567899999999876      67789999999999999999 7          7787654  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                         ...++...+... .+...+     ..++.++.+||.+||+.||++|||+.+|++.|+.+.....
T Consensus       390 ---~~~~~~~~i~~~-~~~~~~-----~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~  447 (454)
T 1qcf_A          390 ---SNPEVIRALERG-YRMPRP-----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE  447 (454)
T ss_dssp             ---CHHHHHHHHHHT-CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred             ---CHHHHHHHHHcC-CCCCCC-----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence               233444433322 233233     3467889999999999999999999999999999876543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=8.7e-46  Score=353.29  Aligned_cols=271  Identities=26%  Similarity=0.393  Sum_probs=199.8

Q ss_pred             hccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|++.+.||+|+||.||+|++      +++.||||++....... ...+.|+..+..++||||+++++++.....  .
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~   86 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--R   86 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH--T
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC--C
Confidence            47899999999999999999985      47899999986544332 233567777777999999999999865432  2


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dikp~Nil~~~~~~~kl~Df  158 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--------RYIHRDLATRNILVENENRVKIGDF  158 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCHhhEEEcCCCeEEEccC
Confidence            46899999999999999965  3599999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++......... .......+|..|+|||.+.+.      .++.++||||||+++|||+||..++......   +....
T Consensus       159 g~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~  228 (295)
T 3ugc_A          159 GLTKVLPQDKEFF-KVKEPGESPIFWYAPESLTES------KFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMI  228 (295)
T ss_dssp             CSCC--------------CTTCGGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHH
T ss_pred             cccccccCCccee-eeccCCCCccceeCcHHhcCC------CCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhh
Confidence            9998765432211 112334577889999999876      6778999999999999999994433211000   00000


Q ss_pred             CCCCC-h---HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        366 PMDPS-F---DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       366 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ..... .   ......+. ...+...+     ..++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          229 GNDKQGQMIVFHLIELLK-NNGRLPRP-----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             CTTCCTHHHHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCccccchhHHHHHHHHh-ccCcCCCC-----cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            00000 0   01111221 12222222     34678899999999999999999999999999999865

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=2.7e-45  Score=344.90  Aligned_cols=255  Identities=22%  Similarity=0.401  Sum_probs=204.6

Q ss_pred             hccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.+. +..||||++............|+..+..++||||+++++++.+..    ..++||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~   82 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY----PIYIVT   82 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----ceEEEE
Confidence            478999999999999999999984 568999998765544444556666677799999999999987663    479999


Q ss_pred             cccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        214 HYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       214 e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      ||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++...
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH--------QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT--------TEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCcCcceEEECCCCCEEEccCccceec
Confidence            99999999999965  4599999999999999999999999        9999999999999999999999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCC
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......   .....+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     .
T Consensus       155 ~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~~~-----~  210 (268)
T 3sxs_A          155 LDDQYVS---SVGTKFPVKWSAPEVFHYF------KYSSKSDVWAFGILMWEVFSLG----------KMPYDLY-----T  210 (268)
T ss_dssp             CTTCEEE---CCSCCCCGGGCCHHHHHHS------EEETTHHHHHHHHHHHHHHTTT----------CCTTTTS-----C
T ss_pred             chhhhhc---ccCCCcCcccCCHHHHhcc------CCchhhhhHHHHHHHHHHHcCC----------CCCcccc-----C
Confidence            5432221   1234567889999999775      56689999999999999999 7          6677653     2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      .......+.. ......+     ...++.+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       211 ~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          211 NSEVVLKVSQ-GHRLYRP-----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             hHHHHHHHHc-CCCCCCC-----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            2222222221 2222222     23456799999999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.5e-45  Score=349.43  Aligned_cols=257  Identities=23%  Similarity=0.417  Sum_probs=205.3

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..++|++.+.||+|+||.||+|.+. +..||||++............|+..+..++||||+++++++.+..    ..++|
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv   97 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR----PIFII   97 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCC----CeEEE
Confidence            3478999999999999999999984 568999999765544444556777777799999999999987663    47999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  169 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--------QFLHRDLAARNCLVNDQGVVKVSDFGLSRY  169 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC--------CccCCCCccceEEEcCCCCEEEcccccccc
Confidence            999999999999965  6799999999999999999999999        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   .....+|+.|+|||.+.+.      .++.++||||||+++|||+| |          ..||...     
T Consensus       170 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~~l~t~g----------~~p~~~~-----  225 (283)
T 3gen_A          170 VLDDEYTS---SVGSKFPVRWSPPEVLMYS------KFSSKSDIWAFGVLMWEIYSLG----------KMPYERF-----  225 (283)
T ss_dssp             BCCHHHHS---TTSTTSCGGGCCHHHHHHC------CCSHHHHHHHHHHHHHHHHTTT----------CCTTTTS-----
T ss_pred             cccccccc---ccCCccCcccCCHHHhccC------CCCchhhHHHHHHHHHHHHhCC----------CCCcccc-----
Confidence            64432111   1234577889999999876      66789999999999999998 7          6777654     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ........+.. ......+     ...++.+.+++.+||+.||++|||+.++++.|+++.+.+
T Consensus       226 ~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e  282 (283)
T 3gen_A          226 TNSETAEHIAQ-GLRLYRP-----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE  282 (283)
T ss_dssp             CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ChhHHHHHHhc-ccCCCCC-----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence            22333333322 2222222     234578999999999999999999999999999998653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.3e-46  Score=365.84  Aligned_cols=261  Identities=26%  Similarity=0.376  Sum_probs=195.4

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..++|++.+.||+|+||.||+|++.     +..||||++......  ......|+..+..++||||+++++++....   
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---  119 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---  119 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC---
Confidence            3468999999999999999999863     567999998654322  223346677777799999999999987763   


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       .+++||||+++|+|.+++++  ..+++.+++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus       120 -~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~D  190 (373)
T 2qol_A          120 -PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM--------GYVHRDLAARNILINSNLVCKVSD  190 (373)
T ss_dssp             -SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECC
T ss_pred             -ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeCCCCCcceEEEcCCCCEEECc
Confidence             46999999999999999975  3699999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHD  363 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~  363 (443)
                      ||+++......... .......+|+.|+|||++.+.      .++.++||||||+++|||++ |          ..||..
T Consensus       191 fg~a~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~SlG~il~ellt~g----------~~P~~~  253 (373)
T 2qol_A          191 FGLGRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR------KFTSASDVWSYGIVLWEVMSYG----------ERPYWE  253 (373)
T ss_dssp             C-----------------------CTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTC-----------CTTTT
T ss_pred             CccccccccCCccc-eeccCCCcCCCccChhhhccC------CcCchhcHHHHHHHHHHHHhCC----------CCCCCC
Confidence            99998765432211 111223457789999999876      67789999999999999998 7          677765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      .     ....+...+... .+...+     ..++..+.+++.+||+.||++|||+.+|++.|+++......
T Consensus       254 ~-----~~~~~~~~i~~~-~~~~~~-----~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~  313 (373)
T 2qol_A          254 M-----SNQDVIKAVDEG-YRLPPP-----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS  313 (373)
T ss_dssp             C-----CHHHHHHHHHTT-EECCCC-----TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGG
T ss_pred             C-----CHHHHHHHHHcC-CCCCCC-----ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccc
Confidence            4     233333333222 222222     33667899999999999999999999999999999876543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-44  Score=349.94  Aligned_cols=272  Identities=19%  Similarity=0.279  Sum_probs=206.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|.+.+.||+|+||.||+|.+  +++.||||++......  ......|+..+..++||||+++++++.....  ...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~   85 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT--RHKV   85 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT--CCEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC--ceEE
Confidence            47899999999999999999998  4899999998653322  1223456666666999999999999876543  3579


Q ss_pred             eeecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----cCCCcEEE
Q psy14889        211 LVTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVI  282 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----~~~~~~kl  282 (443)
                      +||||+++|+|.+++...    .+++.++..++.||+.||.|||+.        +|+||||||+|||+    +.++.+||
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--------GIVHRNIKPGNIMRVIGEDGQSVYKL  157 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEEECTTSCEEEEE
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCCHHHEEEeccCCCCceEEE
Confidence            999999999999999653    399999999999999999999999        99999999999999    77888999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCccccccccccccc--CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM--DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      +|||+++........     ....||+.|+|||++......  ....++.++|||||||++|||++|          ..|
T Consensus       158 ~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g----------~~p  222 (319)
T 4euu_A          158 TDFGAARELEDDEQF-----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG----------SLP  222 (319)
T ss_dssp             CCCTTCEECCTTCCB-----CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS----------SCS
T ss_pred             ccCCCceecCCCCce-----eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhC----------CCC
Confidence            999999876543221     335799999999998632100  011677899999999999999999          666


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCC----------------CCCC-CCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQR----------------PVLP-NRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |..........+.+.+........                ..++ ........+..+.+++.+||+.||++|||++|+++
T Consensus       223 f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~  302 (319)
T 4euu_A          223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (319)
T ss_dssp             EECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhh
Confidence            654432222333333333221100                0111 11233567888999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy14889        424 TLIKLACA  431 (443)
Q Consensus       424 ~L~~l~~~  431 (443)
                      ..++-...
T Consensus       303 h~~d~~~~  310 (319)
T 4euu_A          303 ETSDILHR  310 (319)
T ss_dssp             HHHHHTC-
T ss_pred             ccHHHhhc
Confidence            98876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.6e-45  Score=346.36  Aligned_cols=253  Identities=25%  Similarity=0.474  Sum_probs=204.2

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||.||+|+++++.||||++......   ......|+..+..++||||+++++++.+...  ...++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA--PHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS--SSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC--CCeEee
Confidence            68999999999999999999999999999998654322   1223456666667899999999999877633  347999


Q ss_pred             ecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC--eEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        213 THYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA--IAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~--iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      |||+++|+|.+++...   .+++..+..++.|++.||.|||+.        +  |+||||||+|||++.++.++|+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~~i~H~dikp~Nil~~~~~~~~l~~~~~  159 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL--------EPLIPRHALNSRSVMIDEDMTARISMADV  159 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS--------SSCCTTCCCSGGGEEECTTSCEEEEGGGS
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceecCCCccceEEEcCCcceeEEeccc
Confidence            9999999999999764   489999999999999999999988        6  99999999999999999999999998


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.....         ....||+.|+|||.+.+....   .++.++||||||+++|||++|          ..||.+.   
T Consensus       160 ~~~~~~---------~~~~~t~~y~aPE~~~~~~~~---~~~~~~Di~slG~il~el~~g----------~~p~~~~---  214 (271)
T 3kmu_A          160 KFSFQS---------PGRMYAPAWVAPEALQKKPED---TNRRSADMWSFAVLLWELVTR----------EVPFADL---  214 (271)
T ss_dssp             CCTTSC---------TTCBSCGGGSCHHHHHSCGGG---SCHHHHHHHHHHHHHHHHHHC----------SCTTTTS---
T ss_pred             eeeecc---------cCccCCccccChhhhccCCCC---CCCchhhHHHHHHHHHHHHhC----------CCCcccc---
Confidence            754221         234789999999999865221   333479999999999999999          7777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                        ...............+..+     ..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       215 --~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          215 --SNMEIGMKVALEGLRPTIP-----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             --CHHHHHHHHHHSCCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             --ChHHHHHHHHhcCCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence              2233333333344444444     3366789999999999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.5e-45  Score=361.32  Aligned_cols=262  Identities=22%  Similarity=0.380  Sum_probs=205.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeeccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMT  201 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~  201 (443)
                      +...++|++.+.||+|+||.||+|.+       +++.||||++.......  .....|+..+..+ +||||+++++++..
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~   97 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   97 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec
Confidence            34457899999999999999999985       24789999986543222  2234555555557 89999999999877


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcccC----------------------------------------------------
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNRTT----------------------------------------------------  229 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------  229 (443)
                      ...   .+++||||+++|+|.+++....                                                    
T Consensus        98 ~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           98 PGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             TTS---CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             CCC---ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            543   3689999999999999996422                                                    


Q ss_pred             ---------------CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        230 ---------------LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       230 ---------------l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                                     +++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++.+...
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~--------~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--------KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                           89999999999999999999999        9999999999999999999999999999766443


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ....  ......||+.|+|||++.+.      .++.++||||||+++|||+| |          ..||.....    ...
T Consensus       247 ~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g----------~~p~~~~~~----~~~  304 (359)
T 3vhe_A          247 PDYV--RKGDARLPLKWMAPETIFDR------VYTIQSDVWSFGVLLWEIFSLG----------ASPYPGVKI----DEE  304 (359)
T ss_dssp             TTCE--EC--CEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHTTTS----------CCSSTTCCC----SHH
T ss_pred             ccch--hccccCCCceeEChhhhcCC------CCCchhhhhhHHHHHHHHHhcC----------CCCCCccch----hHH
Confidence            2211  12345788999999999876      67789999999999999998 8          677765321    223


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      +...+.. ......+     ..++.++.+++.+||+.||++|||+.|+++.|+++.+++
T Consensus       305 ~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          305 FCRRLKE-GTRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            3333322 2233333     235678999999999999999999999999999998754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=8.8e-45  Score=352.93  Aligned_cols=244  Identities=23%  Similarity=0.338  Sum_probs=198.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||+|++....    ........|+..+..++||||+++++++.+.    ..+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----~~~   80 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----DRL   80 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS----SEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC----CEE
Confidence            6899999999999999999998  58999999986532    1222334555666669999999999999876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        81 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~g~vkL~DFG~a  152 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--------DVVYRDIKLENLMLDKDGHIKITDFGLC  152 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCcCCHHHEEECCCCCEEEeeccch
Confidence            999999999999999965 5799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...    
T Consensus       153 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~Pf~~~----  208 (337)
T 1o6l_A          153 KEGISDGA----TMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ----  208 (337)
T ss_dssp             BCSCCTTC----CBCCCEECGGGCCGGGGSSS------CBCTTHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             hhcccCCC----cccccccChhhCChhhhcCC------CCCchhhcccchhHHHHHhcC----------CCCCCCC----
Confidence            75432221    12456899999999999876      677899999999999999999          7777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                       ....+...+...  ...+|     ...+.++.+|+.+||+.||++||     ++.|+++
T Consensus       209 -~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          209 -DHERLFELILME--EIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CHHHHHHHHHcC--CCCCC-----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence             233343333322  22233     23567899999999999999999     8999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-45  Score=360.95  Aligned_cols=262  Identities=22%  Similarity=0.406  Sum_probs=208.0

Q ss_pred             hhhhccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeec
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSD  199 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~  199 (443)
                      +...++|.+.+.||+|+||.||+|.+.         +..||||++.......  .....|+..+..+ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            344578999999999999999999863         2479999986543322  2233555555557 999999999999


Q ss_pred             cccCCcccEEEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCe
Q psy14889        200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAI  262 (443)
Q Consensus       200 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~i  262 (443)
                      ....    .+++||||+++|+|.+++...                 .+++..++.++.||+.||.|||+.        +|
T Consensus       145 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~i  212 (382)
T 3tt0_A          145 TQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--------KC  212 (382)
T ss_dssp             CSSS----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--------TC
T ss_pred             ccCC----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--------CE
Confidence            8764    369999999999999999653                 389999999999999999999999        99


Q ss_pred             EEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHH
Q psy14889        263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW  342 (443)
Q Consensus       263 iHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~  342 (443)
                      +||||||+|||++.++.+||+|||+++........  .......||+.|+|||++.+.      .++.++|||||||++|
T Consensus       213 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~  284 (382)
T 3tt0_A          213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDR------IYTHQSDVWSFGVLLW  284 (382)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT--CCCTTCCCGGGGSCHHHHHSC------CCCHHHHHHHHHHHHH
T ss_pred             ecCCCCcceEEEcCCCcEEEcccCccccccccccc--ccccCCCCCcceeCHHHhcCC------CCCchhHHHHHHHHHH
Confidence            99999999999999999999999999866543221  112344678899999999876      6778999999999999


Q ss_pred             HHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        343 EVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       343 ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      ||++ |          ..||...     ....+...+.. ..++..+     ..++.++.+|+.+||+.||++|||+.||
T Consensus       285 ellt~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~el  343 (382)
T 3tt0_A          285 EIFTLG----------GSPYPGV-----PVEELFKLLKE-GHRMDKP-----SNCTNELYMMMRDCWHAVPSQRPTFKQL  343 (382)
T ss_dssp             HHHTTS----------CCSSTTC-----CHHHHHHHHHT-TCCCCCC-----SSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHhCC----------CCCCCCC-----CHHHHHHHHHc-CCCCCCC-----ccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            9999 7          6677653     33444444332 2233333     3466789999999999999999999999


Q ss_pred             HHHHHHHhhcccc
Q psy14889        422 KKTLIKLACADMY  434 (443)
Q Consensus       422 l~~L~~l~~~~~~  434 (443)
                      ++.|+++......
T Consensus       344 l~~L~~~~~~~~~  356 (382)
T 3tt0_A          344 VEDLDRIVALTSN  356 (382)
T ss_dssp             HHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999865433

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=9.8e-46  Score=363.84  Aligned_cols=273  Identities=16%  Similarity=0.210  Sum_probs=203.6

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccchHHH-------------HHHHHHHhccCCCce
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEASWSRE-------------TEIYSTVLLRHENIL  193 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~~~~e-------------~ei~~~~~l~H~nIv  193 (443)
                      ..++|++.+.||+|+||.||+|.+.       ++.||||++..... ....|             .++..+..++||||+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            3468999999999999999999883       47899999865432 12222             233344557899999


Q ss_pred             eeeeeccccCCcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       194 ~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      ++++++..........++||||+ +|+|.+++..  ..+++..++.++.||+.||+|||+.        +|+||||||+|
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~iiHrDlkp~N  182 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH--------EYVHGDIKASN  182 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGG
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEEecCCHHH
Confidence            99999887655446689999999 9999999965  5699999999999999999999999        99999999999


Q ss_pred             EEEc--CCCcEEEEecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        272 ILVK--TNGTCVIADFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       272 iLl~--~~~~~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      ||++  .++.+||+|||+++.+........   .......||+.|+|||++.+.      .++.++|||||||++|||+|
T Consensus       183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~  256 (364)
T 3op5_A          183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV------APSRRGDLEILGYCMIQWLT  256 (364)
T ss_dssp             EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC------CCCchhhHHHHHHHHHHHHh
Confidence            9999  889999999999987654332211   112345699999999999876      67789999999999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      |          ..||.+................ ......+...+....++.++.+++..||+.||++||++.+|++.|+
T Consensus       257 g----------~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~  325 (364)
T 3op5_A          257 G----------HLPWEDNLKDPKYVRDSKIRYR-ENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILL  325 (364)
T ss_dssp             S----------CCTTGGGTTCHHHHHHHHHHHH-HCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             C----------CCCccccccCHHHHHHHHHHhh-hhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            9          6777653221100000110000 0000000000001235678999999999999999999999999999


Q ss_pred             HHhhccc
Q psy14889        427 KLACADM  433 (443)
Q Consensus       427 ~l~~~~~  433 (443)
                      ++.+...
T Consensus       326 ~~~~~~~  332 (364)
T 3op5_A          326 QGLKAIG  332 (364)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            9887543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.3e-45  Score=348.45  Aligned_cols=251  Identities=24%  Similarity=0.333  Sum_probs=195.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---------------------------chHHHHHHHHHHh
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---------------------------SWSRETEIYSTVL  186 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---------------------------~~~~e~ei~~~~~  186 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||++......                           ......|+..+..
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            6899999999999999999987  5889999998654211                           1123456666677


Q ss_pred             ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       187 l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                      ++||||+++++++.+...  ..+++||||+++|+|.+++....+++..+..++.||+.||.|||+.        +|+|||
T Consensus        93 l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~D  162 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNE--DHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ--------KIIHRD  162 (298)
T ss_dssp             CCCTTBCCEEEEEECSSS--SEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCC
T ss_pred             CCCCCCCeEEEEEEcCCC--CEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccC
Confidence            999999999999876433  4689999999999999988888899999999999999999999999        999999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      |||+|||++.++.+||+|||+++........    .....||+.|+|||.+.+....   .++.++|||||||++|||++
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~---~~~~~~Di~slG~~l~~l~~  235 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDAL----LSNTVGTPAFMAPESLSETRKI---FSGKALDVWAMGVTLYCFVF  235 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSSSCE----ECCCCSCGGGCCGGGCCTTCCC---EESHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEECCCCCEEEecCCCcccccccccc----ccCCcCCccccChhhhccCCCC---CCCchhhhHhHHHHHHHHHH
Confidence            9999999999999999999999876543221    1345799999999999765210   13578999999999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |          ..||.+.     ........+....  ...+.   ...++..+.+++.+||+.||++|||+.|+++
T Consensus       236 g----------~~pf~~~-----~~~~~~~~~~~~~--~~~~~---~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          236 G----------QCPFMDE-----RIMCLHSKIKSQA--LEFPD---QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             S----------SCSSCCS-----SHHHHHHHHHHCC--CCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             C----------CCCCCCc-----cHHHHHHHHhccc--CCCCC---ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            9          6777653     2223333322221  11221   1235678999999999999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=4.4e-45  Score=369.31  Aligned_cols=260  Identities=23%  Similarity=0.362  Sum_probs=203.9

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ...++|++.+.||+|+||.||+|.+. +..||||++............|+..+..++||||+++++++...     ..++
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~i  255 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYI  255 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEE
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----ceEE
Confidence            44578999999999999999999995 46799999876543333345566666669999999999998653     2689


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++|+|.+++..   ..+++.+++.++.||+.||+|||++        +|+||||||+|||++.++.+||+|||++
T Consensus       256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~ivHrDlkp~Nill~~~~~~kl~DfG~a  327 (452)
T 1fmk_A          256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--------NYVHRDLRAANILVGENLVCKVADFGLA  327 (452)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred             EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCChhhEEECCCCCEEECCCccc
Confidence            9999999999999964   4599999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........   ......+|..|+|||.+...      .++.++||||||+++|||+| |          ..||.+.   
T Consensus       328 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~sDvwslG~~l~el~t~g----------~~P~~~~---  385 (452)
T 1fmk_A          328 RLIEDNEYT---ARQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELTTKG----------RVPYPGM---  385 (452)
T ss_dssp             C-----------------CCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTT----------CCSSTTC---
T ss_pred             eecCCCcee---cccCCcccccccCHhHHhcC------CCCccccHHhHHHHHHHHHhCC----------CCCCCCC---
Confidence            876532211   11234577899999999876      67789999999999999999 7          6777654   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccccc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYI  435 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~  435 (443)
                        ...++...+.. ..+...+     ..++..+.+||.+||+.||++|||+.++++.|+.+.......
T Consensus       386 --~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~  445 (452)
T 1fmk_A          386 --VNREVLDQVER-GYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  445 (452)
T ss_dssp             --CHHHHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             --CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence              22333333322 2233333     346778999999999999999999999999999988765543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.3e-45  Score=349.43  Aligned_cols=263  Identities=25%  Similarity=0.359  Sum_probs=202.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+.++|++.+.||+|+||.||+|..  +++.||+|++.......    ...+.|+..+..++||||+++++++.+.    
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----   83 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED----   83 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS----
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC----
Confidence            4457899999999999999999997  58899999885433221    2335677777779999999999998765    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~Dlkp~Nil~~~~~~~kl~Df  155 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM--------RIVHRDIKPQNILIDSNKTLKIFDF  155 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCCEEEEeC
Confidence            458999999999999999965 5799999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++........   ......||+.|+|||.+.+.      .++.++||||||+++|||+||          ..||....
T Consensus       156 g~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~~l~~ll~g----------~~pf~~~~  216 (294)
T 4eqm_A          156 GIAKALSETSLT---QTNHVLGTVQYFSPEQAKGE------ATDECTDIYSIGIVLYEMLVG----------EPPFNGET  216 (294)
T ss_dssp             SSSTTC----------------CCSSCCHHHHHTC------CCCTTHHHHHHHHHHHHHHHS----------SCSSCSSC
T ss_pred             CCcccccccccc---ccCccccCccccCHhHhcCC------CCCchHhHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            999766533211   12345799999999999876      667899999999999999999          77776531


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-cHHHHHHHHHHHhhccc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVKKTLIKLACADM  433 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~l~~~~~  433 (443)
                          ......+.+  ....+..+. .....++..+.+++.+||+.||++|| +++++.+.|+++.....
T Consensus       217 ----~~~~~~~~~--~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          217 ----AVSIAIKHI--QDSVPNVTT-DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             ----HHHHHHHHH--SSCCCCHHH-HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             ----hHHHHHHHh--hccCCCcch-hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence                111112221  111111110 01233667899999999999999999 89999999998876543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.7e-44  Score=348.92  Aligned_cols=247  Identities=25%  Similarity=0.368  Sum_probs=199.6

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .|...+.||+|+||.||+|..  +|+.||||++....... .....|+..+..++||||+++++++...    ...++||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~  121 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVG----EELWVLM  121 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEET----TEEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEEC----CEEEEEE
Confidence            477778999999999999998  58999999987554332 2334667777779999999999998876    4589999


Q ss_pred             cccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      ||+++|+|.+++.+..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++.....
T Consensus       122 e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          122 EFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ--------GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             CCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            999999999999988999999999999999999999998        999999999999999999999999999977654


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD  373 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~  373 (443)
                      ....    .....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||...     ....
T Consensus       194 ~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g----------~~pf~~~-----~~~~  248 (321)
T 2c30_A          194 DVPK----RKSLVGTPYWMAPEVISRS------LYATEVDIWSLGIMVIEMVDG----------EPPYFSD-----SPVQ  248 (321)
T ss_dssp             SSCC----BCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTS-----CHHH
T ss_pred             Cccc----cccccCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC-----CHHH
Confidence            3222    2345799999999999776      677899999999999999999          6677553     1222


Q ss_pred             HHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ....+.. ...+...   .....+..+.+++.+||+.||++|||+.|+++.
T Consensus       249 ~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          249 AMKRLRD-SPPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHHH-SSCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhc-CCCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2222221 1222221   123456789999999999999999999999873

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-45  Score=355.51  Aligned_cols=249  Identities=19%  Similarity=0.270  Sum_probs=199.5

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.++|.+.+.||+|+||.||+|..  +++.||+|.+............|+..+..++||||+++++++.+.    ..+++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----~~~~l   78 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM----EELVM   78 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET----TEEEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC----CEEEE
Confidence            457899999999999999999998  588999999876544444445566666679999999999998776    45899


Q ss_pred             eecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--CCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGl  287 (443)
                      ||||+++|+|.+++...  .+++.++..++.||+.||.|||+.        +|+||||||+|||++.  ++.+||+|||+
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------givH~Dlkp~NIl~~~~~~~~~kl~Dfg~  150 (321)
T 1tki_A           79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH--------NIGHFDIRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred             EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence            99999999999999753  699999999999999999999999        9999999999999987  78999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.+.....     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       151 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g----------~~pf~~~---  206 (321)
T 1tki_A          151 ARQLKPGDN-----FRLLFTAPEYYAPEVHQHD------VVSTATDMWSLGTLVYVLLSG----------INPFLAE---  206 (321)
T ss_dssp             CEECCTTCE-----EEEEESCGGGSCHHHHTTC------EECHHHHHHHHHHHHHHHHHS----------SCTTCCS---
T ss_pred             CeECCCCCc-----cccccCChhhcCcHHhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCcCC---
Confidence            987654221     1234689999999999875      456899999999999999999          6777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ........+......  .+.. .....+.++.+|+.+||+.||++|||+.|+++
T Consensus       207 --~~~~~~~~i~~~~~~--~~~~-~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          207 --TNQQIIENIMNAEYT--FDEE-AFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --SHHHHHHHHHHTCCC--CCHH-HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHcCCCC--CChh-hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              223333322222111  1100 00235678999999999999999999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=362.84  Aligned_cols=260  Identities=22%  Similarity=0.338  Sum_probs=205.0

Q ss_pred             hhhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ...++|++.+.||+|+||.||+|.+       +++.||||++.....  .......|+..+..++||||+++++++....
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            3347899999999999999999995       356899999854322  2223345666666799999999999988764


Q ss_pred             CcccEEEeeecccCcccHHHHhcc--------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR--------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~--------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                          ..++||||+++|+|.+++..        ..+++.+++.++.||+.||+|||+.        +|+||||||+|||++
T Consensus       148 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~  215 (367)
T 3l9p_A          148 ----PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--------HFIHRDIAARNCLLT  215 (367)
T ss_dssp             ----SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEES
T ss_pred             ----CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCChhhEEEe
Confidence                35899999999999999964        3489999999999999999999999        999999999999999


Q ss_pred             CCC---cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCC
Q psy14889        276 TNG---TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKAN  351 (443)
Q Consensus       276 ~~~---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~  351 (443)
                      .++   .+||+|||+++.+.......  ......||+.|+|||++.+.      .++.++|||||||++|||++ |    
T Consensus       216 ~~~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslG~il~ellt~g----  283 (367)
T 3l9p_A          216 CPGPGRVAKIGDFGMARDIYRAGYYR--KGGCAMLPVKWMPPEAFMEG------IFTSKTDTWSFGVLLWEIFSLG----  283 (367)
T ss_dssp             CSSTTCCEEECCCHHHHHHHHHSSCT--TCCGGGSCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----
T ss_pred             cCCCCceEEECCCccccccccccccc--cCCCcCCcccEECHHHhcCC------CCCcHHHHHHHHHHHHHHHhCC----
Confidence            555   59999999997654322211  12345688999999999876      67789999999999999998 7    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                            ..||...     ....+...+... ..+..+     ..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       284 ------~~pf~~~-----~~~~~~~~i~~~-~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          284 ------YMPYPSK-----SNQEVLEFVTSG-GRMDPP-----KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             ------CCSSTTC-----CHHHHHHHHHTT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ------CCCCCCC-----CHHHHHHHHHcC-CCCCCC-----ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence                  6777653     333444433322 222222     34667899999999999999999999999999998875


Q ss_pred             cc
Q psy14889        432 DM  433 (443)
Q Consensus       432 ~~  433 (443)
                      ..
T Consensus       347 ~~  348 (367)
T 3l9p_A          347 PD  348 (367)
T ss_dssp             HH
T ss_pred             hh
Confidence            43

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-45  Score=356.19  Aligned_cols=260  Identities=22%  Similarity=0.355  Sum_probs=206.5

Q ss_pred             hhhhccccccceeeeecCeEEEEEEECC-------ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-------~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      +...++|++.+.||+|+||.||+|.+.+       +.||||++......  ....+.|+..+..++||||+++++++.+.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            3445789999999999999999999853       78999998654322  22335667777779999999999998776


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-------------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-------------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQ  257 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~  257 (443)
                      .    ..++||||+++|+|.+++..                         ..+++.+++.++.||+.||.|||+.     
T Consensus       123 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-----  193 (343)
T 1luf_A          123 K----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-----  193 (343)
T ss_dssp             S----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             C----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----
Confidence            3    46999999999999999964                         4689999999999999999999999     


Q ss_pred             CCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHH
Q psy14889        258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL  337 (443)
Q Consensus       258 ~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~  337 (443)
                         +|+||||||+|||++.++.+||+|||+++........  .......||+.|+|||.+.+.      .++.++|||||
T Consensus       194 ---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~sl  262 (343)
T 1luf_A          194 ---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY--KADGNDAIPIRWMPPESIFYN------RYTTESDVWAY  262 (343)
T ss_dssp             ---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB--C----CCBCGGGCCHHHHHHC------CCCHHHHHHHH
T ss_pred             ---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccc--cccCCCcccceecChhhhccC------CcCcccccHHH
Confidence               9999999999999999999999999999766432211  112344688999999999876      67789999999


Q ss_pred             HHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC
Q psy14889        338 GLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL  416 (443)
Q Consensus       338 Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  416 (443)
                      |+++|||+| |          ..||.+.     ........+.. ...+..+     ..++..+.+++.+||+.||++||
T Consensus       263 G~il~el~t~g----------~~p~~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rp  321 (343)
T 1luf_A          263 GVVLWEIFSYG----------LQPYYGM-----AHEEVIYYVRD-GNILACP-----ENCPLELYNLMRLCWSKLPADRP  321 (343)
T ss_dssp             HHHHHHHHTTT----------CCTTTTS-----CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHhcC----------CCcCCCC-----ChHHHHHHHhC-CCcCCCC-----CCCCHHHHHHHHHHcccCcccCC
Confidence            999999999 7          6677653     23333333322 2222333     34667899999999999999999


Q ss_pred             cHHHHHHHHHHHhhcc
Q psy14889        417 SALRVKKTLIKLACAD  432 (443)
Q Consensus       417 s~~evl~~L~~l~~~~  432 (443)
                      |+.++++.|+++.+..
T Consensus       322 s~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          322 SFCSIHRILQRMCERA  337 (343)
T ss_dssp             CHHHHHHHHHHTTC--
T ss_pred             CHHHHHHHHHHHHhhh
Confidence            9999999999987643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.7e-45  Score=353.71  Aligned_cols=254  Identities=23%  Similarity=0.430  Sum_probs=196.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCce----eEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGEN----VAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~----vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+  +++.    ||+|.+.....  .......|+..+..++||||+++++++.+..    
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----   90 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST----   90 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS----
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----
Confidence            6899999999999999999997  4444    57777643322  2223345666666699999999999987653    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++|+||+.+|+|.+++..  ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivH~Dikp~NIll~~~~~~kl~Df  161 (327)
T 3poz_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--------RLVHRDLAARNVLVKTPQHVKITDF  161 (327)
T ss_dssp             -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred             -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC--------CeeCCCCChheEEECCCCCEEEccC
Confidence             5799999999999999964  5699999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.........  ......||+.|+|||++.+.      .++.++|||||||++|||+| |          ..||...
T Consensus       162 g~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g----------~~p~~~~  223 (327)
T 3poz_A          162 GLAKLLGAEEKEY--HAEGGKVPIKWMALESILHR------IYTHQSDVWSYGVTVWELMTFG----------SKPYDGI  223 (327)
T ss_dssp             THHHHHTTTCC---------CCCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTC
T ss_pred             cceeEccCCcccc--cccCCCccccccChHHhccC------CCCchhhhhhhHHHHHHHHhcC----------CCCccCC
Confidence            9998765433221  12334578899999999876      67789999999999999999 8          6677653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                           ....+...+... .....+     ..++..+.+++.+||+.||++|||+.++++.|+++...
T Consensus       224 -----~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          224 -----PASEISSILEKG-ERLPQP-----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             -----CGGGHHHHHHTT-CCCCCC-----TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             -----CHHHHHHHHHcC-CCCCCC-----ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence                 223333333322 222222     33667899999999999999999999999999998764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.2e-45  Score=375.53  Aligned_cols=257  Identities=22%  Similarity=0.400  Sum_probs=207.6

Q ss_pred             hhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..++|++.+.||+|+||.||+|.+.  +..||||++............|+..+..++||||+++++++....    .+++
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~l  293 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYI  293 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCC----cEEE
Confidence            4467999999999999999999984  789999998765444344455666666699999999999997764    3699


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++|+|.++++.   ..+++..++.++.||+.||+|||++        +|+||||||+|||++.++.+||+|||++
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DFG~a  365 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--------NFIHRNLAARNCLVGENHLVKVADFGLS  365 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCChhhEEECCCCcEEEeecccc
Confidence            9999999999999964   4589999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........   ......+|..|+|||++...      .++.++|||||||++|||+| |          ..||....  
T Consensus       366 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~sDvwSlG~~l~el~t~g----------~~p~~~~~--  424 (495)
T 1opk_A          366 RLMTGDTYT---AHAGAKFPIKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATYG----------MSPYPGID--  424 (495)
T ss_dssp             ECCTTCCEE---CCTTCCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS----------CCSSTTCC--
T ss_pred             eeccCCcee---ecCCCcCCcceeCHhHHhcC------CCCcHHhHHhHHHHHHHHHhCC----------CCCCCCCC--
Confidence            876543211   12234567899999999876      56789999999999999999 7          66776542  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                         ...+...+.. ..+...+     ..++..+.+||.+||+.||++|||+.+|++.|+.+.+..
T Consensus       425 ---~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~  480 (495)
T 1opk_A          425 ---LSQVYELLEK-DYRMERP-----EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  480 (495)
T ss_dssp             ---GGGHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred             ---HHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence               2333333322 2223333     346788999999999999999999999999999886543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-44  Score=347.32  Aligned_cols=254  Identities=27%  Similarity=0.482  Sum_probs=195.5

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||+|++.++.||||++.... .......|+..+..++||||+++++++.+.      .++||||
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~~lv~e~   80 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACLNP------VCLVMEY   80 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTT-HHHHHHHHHHHHHHCCCTTBCCEEEBCTTT------TEEEEEC
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChh-HHHHHHHHHHHHhcCCCCCcCeEEEEEcCC------cEEEEEc
Confidence            689999999999999999999999999999885432 223334566666679999999999998743      5899999


Q ss_pred             cCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-EEEEecCCccc
Q psy14889        216 HSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CVIADFGLAVS  290 (443)
Q Consensus       216 ~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-~kl~DfGla~~  290 (443)
                      +++|+|.+++...    .+++..++.++.|++.||+|||+..     ..+|+||||||+|||++.++. +||+|||++..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~  155 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ-----PKALIHRDLKPPNLLLVAGGTVLKICDFGTACD  155 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCS-----SSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence            9999999999753    3789999999999999999999830     128999999999999998886 79999999975


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .....       ....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||.....   .
T Consensus       156 ~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g----------~~p~~~~~~---~  209 (307)
T 2eva_A          156 IQTHM-------TNNKGSAAWMAPEVFEGS------NYSEKCDVFSWGIILWEVITR----------RKPFDEIGG---P  209 (307)
T ss_dssp             ----------------CCTTSSCHHHHTCC------CCCTHHHHHHHHHHHHHHHHT----------CCTTTTTCS---S
T ss_pred             ccccc-------ccCCCCCceEChhhhCCC------CCCcHHHHHHHHHHHHHHHHC----------CCCchhhCc---c
Confidence            54321       234689999999999876      677899999999999999999          667754321   1


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ........ .....+..+     ..++..+.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus       210 ~~~~~~~~-~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          210 AFRIMWAV-HNGTRPPLI-----KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHHHHHHH-HTTCCCCCB-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHH-hcCCCCCcc-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            11111111 122223222     3366789999999999999999999999999999886543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4.2e-45  Score=354.41  Aligned_cols=263  Identities=20%  Similarity=0.227  Sum_probs=203.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||||++..... .....|.++  +..+ +||||+++++++...    ...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~--l~~l~~h~~i~~~~~~~~~~----~~~~   81 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRF--YKQLGSGDGIPQVYYFGPCG----KYNA   81 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHH--HHHHCSCTTSCCEEEEEEET----TEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHH--HHHhhCCCCCCEEEEEEecC----CccE
Confidence            36899999999999999999996  689999998865432 334444444  4447 999999999998775    4579


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-----EEEE
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIA  283 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-----~kl~  283 (443)
                      +||||+ +|+|.+++.  ...+++..++.++.|++.||+|||+.        +|+||||||+|||++.++.     +||+
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~iiHrDlkp~Nill~~~~~~~~~~~kl~  152 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK--------NLIYRDVKPENFLIGRPGNKTQQVIHII  152 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred             EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence            999999 899999997  46799999999999999999999999        9999999999999998887     9999


Q ss_pred             ecCCcccccccCCcCCC---CCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        284 DFGLAVSYSQLSNKMDI---PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      |||+++.+.........   ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..|
T Consensus       153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~g----------~~P  216 (330)
T 2izr_A          153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGK------EQSRRDDLEALGHMFMYFLRG----------SLP  216 (330)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCT
T ss_pred             EcccceeeecCCCCccccccccCCcCCCccccChHHHcCC------CCCchhHHHHHHHHHHHHhcC----------CCC
Confidence            99999876543322111   12456899999999999876      677899999999999999999          777


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      |.+....  ........+.....  ..+........+ ++.+++..||+.||.+||++++|++.|+++.+...
T Consensus       217 f~~~~~~--~~~~~~~~i~~~~~--~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~  284 (330)
T 2izr_A          217 WQGLKAD--TLKERYQKIGDTKR--ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG  284 (330)
T ss_dssp             TTTCCCS--SHHHHHHHHHHHHH--HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ccccccc--cHHHHHHHHHhhhc--cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            7764221  22222221111100  011000112244 89999999999999999999999999999887543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=9.2e-45  Score=356.00  Aligned_cols=250  Identities=20%  Similarity=0.275  Sum_probs=200.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-------chHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-------SWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .+.+.|.+.+.||+|+||.||+|..  +|+.||+|++......       ....+.|+..+..++||||+++++++.+. 
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-   87 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR-   87 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC-
Confidence            4557899999999999999999998  5899999998654321       12345677777779999999999998776 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----  278 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----  278 (443)
                         ..+++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++    
T Consensus        88 ---~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~~~~~~  156 (361)
T 2yab_A           88 ---TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--------KIAHFDLKPENIMLLDKNIPIP  156 (361)
T ss_dssp             ---SEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESCTTSSSC
T ss_pred             ---CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEeCCCCCcc
Confidence               468999999999999999964 5799999999999999999999999        999999999999998877    


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          .
T Consensus       157 ~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~~ll~g----------~  215 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG----------A  215 (361)
T ss_dssp             CEEECCCSSCEECCTTCC-----CCCCCSCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------C
T ss_pred             CEEEEecCCceEcCCCCc-----cccCCCCccEECchHHcCC------CCCccccHHHHHHHHHHHHhC----------C
Confidence            799999999987654221     2345799999999999876      677899999999999999999          7


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .||.+.     ........+...  ...++... ....+..+.+||.+||..||++|||+.|+++
T Consensus       216 ~Pf~~~-----~~~~~~~~i~~~--~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          216 SPFLGD-----TKQETLANITAV--SYDFDEEF-FSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CSSCCS-----SHHHHHHHHHTT--CCCCCHHH-HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCC-----CHHHHHHHHHhc--CCCCCchh-ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            777653     223333322211  11121100 1235678999999999999999999999885

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.6e-44  Score=361.89  Aligned_cols=251  Identities=24%  Similarity=0.347  Sum_probs=199.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+.++|++.+.||+|+||.||+|..  +|+.||+|++......   ....+.|+..+..++||||+++++++.+.    .
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----~   83 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE----G   83 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS----S
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC----C
Confidence            3457899999999999999999987  6899999998654322   22234566666779999999999998766    4


Q ss_pred             EEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc---CCCcEEEE
Q psy14889        208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK---TNGTCVIA  283 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~---~~~~~kl~  283 (443)
                      ..++||||+.+|+|.+++. +..+++..+..++.||+.||.|||+.        +|+||||||+|||++   .++.+||+
T Consensus        84 ~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~--------givHrDlKp~NIll~~~~~~~~vkL~  155 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM--------GVVHRNLKPENLLLASKLKGAAVKLA  155 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCSSTTEEESBSSTTCCEEEC
T ss_pred             EEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEEeccCCCCcEEEc
Confidence            6899999999999999885 46799999999999999999999999        999999999999998   45789999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++.........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+
T Consensus       156 DFG~a~~~~~~~~~----~~~~~gt~~Y~APE~l~~~------~~~~~~DIwSlGvilyell~G----------~~Pf~~  215 (444)
T 3soa_A          156 DFGLAIEVEGEQQA----WFGFAGTPGYLSPEVLRKD------PYGKPVDLWACGVILYILLVG----------YPPFWD  215 (444)
T ss_dssp             CCSSCBCCCTTCCB----CCCSCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSCCC
T ss_pred             cCceeEEecCCCce----eecccCCcccCCHHHhcCC------CCCCccccHHHHHHHHHHHhC----------CCCCCC
Confidence            99999766543222    2345799999999999876      677899999999999999999          677765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .     ....+...+.........+ .|  ..+++++.+|+.+||+.||++|||+.|+++
T Consensus       216 ~-----~~~~~~~~i~~~~~~~~~~-~~--~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          216 E-----DQHRLYQQIKAGAYDFPSP-EW--DTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             S-----SHHHHHHHHHHTCCCCCTT-TT--TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             c-----cHHHHHHHHHhCCCCCCcc-cc--ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            3     2333333333322222111 11  236678999999999999999999999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.6e-44  Score=339.17  Aligned_cols=254  Identities=23%  Similarity=0.420  Sum_probs=206.3

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||.||+|.+ ++..||+|++............|+..+..++||||+++++++.+..    ..++|||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e   83 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVTE   83 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SCEEEEC
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CeEEEEe
Confidence            6899999999999999999998 6788999999766544444556677777799999999999987763    4699999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++....
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA--------CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCchheEEECCCCCEEEcccccccccc
Confidence            9999999999975  4589999999999999999999999        99999999999999999999999999997654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....   ......||..|+|||.+.+.      .++.++||||||+++|||++ |          ..||...     ..
T Consensus       156 ~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~~~-----~~  211 (267)
T 3t9t_A          156 DDQYT---SSTGTKFPVKWASPEVFSFS------RYSSKSDVWSFGVLMWEVFSEG----------KIPYENR-----SN  211 (267)
T ss_dssp             CHHHH---STTSTTCCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTC-----CH
T ss_pred             ccccc---ccccccccccccChhhhcCC------CccchhchhhhHHHHHHHhccC----------CCCCCCC-----CH
Confidence            32211   11234578899999999765      66789999999999999999 7          6677653     22


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ......+.. ......+     ...+..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       212 ~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          212 SEVVEDIST-GFRLYKP-----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-CCcCCCC-----ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            333333322 2222222     23557899999999999999999999999999999865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.1e-44  Score=344.12  Aligned_cols=251  Identities=24%  Similarity=0.419  Sum_probs=199.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--------hHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--------WSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--------~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+|.+  +++.||||++.......        ...+.|+..+..++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            47899999999999999999998  68899999885433211        23356677777799999999999986652 


Q ss_pred             cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC--eEEeCCCCCCEEEcCCCc-
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA--IAHRDIKSKNILVKTNGT-  279 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~--iiHrDlk~~NiLl~~~~~-  279 (443)
                           ++||||+++|+|.+++.+  ..+++..+..++.|++.||+|||+.        +  |+||||||+|||++.++. 
T Consensus        97 -----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--------~~~ivH~dikp~Nil~~~~~~~  163 (287)
T 4f0f_A           97 -----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ--------NPPIVHRDLRSPNIFLQSLDEN  163 (287)
T ss_dssp             -----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS--------SSCCBCSCCSGGGEEESCCCTT
T ss_pred             -----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC--------CCCeecCCCCcceEEEeccCCC
Confidence                 699999999999998843  5699999999999999999999998        7  999999999999988776 


Q ss_pred             ----EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc
Q psy14889        280 ----CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE  355 (443)
Q Consensus       280 ----~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~  355 (443)
                          +||+|||+++.....       .....||+.|+|||.+.....    .++.++||||||+++|||++|        
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~----~~~~~~Di~slG~~l~~l~~g--------  224 (287)
T 4f0f_A          164 APVCAKVADFGLSQQSVHS-------VSGLLGNFQWMAPETIGAEEE----SYTEKADTYSFAMILYTILTG--------  224 (287)
T ss_dssp             CSCCEEECCCTTCBCCSSC-------EECCCCCCTTSCGGGSSCSSC----EECHHHHHHHHHHHHHHHHHS--------
T ss_pred             CceeEEeCCCCcccccccc-------ccccCCCccccCchhhccCCC----CcCchhhHHHHHHHHHHHHcC--------
Confidence                999999999754332       123478999999999843211    456799999999999999999        


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                        ..||.....   ...............+..+     ..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       225 --~~pf~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          225 --EGPFDEYSY---GKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             --SCTTTTCCC---CHHHHHHHHHHSCCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             --CCCCccccc---cHHHHHHHHhccCCCCCCC-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence              677765421   2222233333333444444     34667899999999999999999999999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.2e-45  Score=355.06  Aligned_cols=244  Identities=25%  Similarity=0.365  Sum_probs=190.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||||++....    ........|...+..+ +||||+++++++.+.    ..
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~----~~   98 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP----DR   98 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SE
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC----CE
Confidence            7899999999999999999998  58899999986532    1111122333344335 799999999999876    45


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NILl~~~g~ikL~DFG~  170 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK--------GIIYRDLKLDNVLLDHEGHCKLADFGM  170 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCHHHEEECCCCCEEEccccc
Confidence            8999999999999999965 6799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.......    .....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       171 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~G----------~~Pf~~~---  227 (353)
T 3txo_A          171 CKEGICNGV----TTATFCGTPDYIAPEILQEM------LYGPAVDWWAMGVLLYEMLCG----------HAPFEAE---  227 (353)
T ss_dssp             CBCSCC-------------CCGGGCCHHHHHHH------HCTTHHHHHHHHHHHHHHHHS----------SCSSCCS---
T ss_pred             eeecccCCc----cccccCCCcCeEChhhcCCC------CcCCccCCCcchHHHHHHHhC----------CCCCCCC---
Confidence            975432211    22456899999999999876      667899999999999999999          7787653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH------HHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA------LRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~  423 (443)
                        ....+...+...  ...+|     ...+..+.+|+.+||+.||++||++      .|+++
T Consensus       228 --~~~~~~~~i~~~--~~~~p-----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          228 --NEDDLFEAILND--EVVYP-----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             --SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             --CHHHHHHHHHcC--CCCCC-----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence              233333333222  22233     2255679999999999999999998      66664

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=8.4e-45  Score=361.65  Aligned_cols=253  Identities=20%  Similarity=0.284  Sum_probs=199.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeecc------CccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~------~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|++.+.||+|+||.||+|++  +++.||+|++...      .......|.+++  ..++||||+++++++.+.    
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il--~~l~hp~Iv~l~~~~~~~----  141 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM--AFANSPWVVQLFYAFQDD----  141 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHH--HHCCCTTBCCEEEEEECS----
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHH--HhCCCCCCCeEEEEEEEC----
Confidence            47899999999999999999998  5889999998642      122334455554  448999999999999876    


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+++|+|.+++++..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~--------givHrDLKp~NILl~~~g~ikL~DFG  213 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM--------GFIHRDVKPDNMLLDKSGHLKLADFG  213 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCCHHHeeECCCCCEEEeccc
Confidence            4689999999999999999988999999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........   .....+||+.|+|||++.+.....  .++.++|||||||++|||++|          ..||...  
T Consensus       214 ~a~~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~--~~~~~~DiwSlGvilyell~G----------~~Pf~~~--  276 (410)
T 3v8s_A          214 TCMKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDG--YYGRECDWWSVGVFLYEMLVG----------DTPFYAD--  276 (410)
T ss_dssp             TCEECCTTSEE---ECCSCCSCGGGCCHHHHHTTTTTC--EEETHHHHHHHHHHHHHHHHS----------SCTTCCS--
T ss_pred             eeEeeccCCcc---cccCCcCCccccCHHHhhccCCCc--CCCCcceEecchHHHHHHHhC----------CCCCCCC--
Confidence            99776543211   123458999999999997652110  266899999999999999999          7777653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~  424 (443)
                         ........+........+|.   ...++.++.+||.+||..+|.+  ||+++||++.
T Consensus       277 ---~~~~~~~~i~~~~~~~~~p~---~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          277 ---SLVGTYSKIMNHKNSLTFPD---DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ---SHHHHHHHHHTHHHHCCCCT---TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ---ChhhHHHHHHhccccccCCC---cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence               22233222221111122222   1235678999999999999988  9999999863

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.4e-45  Score=353.46  Aligned_cols=276  Identities=25%  Similarity=0.317  Sum_probs=206.1

Q ss_pred             chHHHhhhhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        127 PLLIQRTLAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       127 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .........++|++.+.||+|+||.||+|.. +|+.||||++.....  .......|+..+..++||||+++++++.+..
T Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           21 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             CTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred             cHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCC
Confidence            3445556678999999999999999999987 689999999865332  1223455666666799999999999998764


Q ss_pred             CcccEEEeeecccCcccHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG  278 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~~-----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~  278 (443)
                          ..++||||+++|+|.+++...     .+++..+..++.|++.||.|||+.+     .++|+||||||+|||++.++
T Consensus       101 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A          101 ----ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-----DPKIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             ----CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-----SSCEECCCCSGGGEEECTTC
T ss_pred             ----ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeCCCchhhEEECCCC
Confidence                368999999999999999642     3999999999999999999999862     45899999999999999999


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+++.........   .....||+.|+|||++.+.      .++.++||||||+++|||++|          .
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~  232 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITG----------Q  232 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCE---ECCCCSCGGGCCHHHHHHS------EECHHHHHHHHHHHHHHHHHC----------C
T ss_pred             CEEeccCccccccCcccccc---cccccCCcCccCHHHhccC------CCCccccchhHHHHHHHHHhC----------C
Confidence            99999999998765332221   2334699999999999776      566899999999999999999          4


Q ss_pred             CCCCCCC---CCCCChH-HHHhhhhhcC----CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        359 APYHDLV---PMDPSFD-DMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       359 ~P~~~~~---~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      .||....   ....... .+........    ...... .......+..+.+++.+||+.||++|||+.||++.|+....
T Consensus       233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             CSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             CcccccccccccchhHHHHHHHHhhchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            5553110   0000001 1111110000    001111 11234567889999999999999999999999999987543


Q ss_pred             c
Q psy14889        431 A  431 (443)
Q Consensus       431 ~  431 (443)
                      .
T Consensus       312 ~  312 (326)
T 3uim_A          312 A  312 (326)
T ss_dssp             S
T ss_pred             h
Confidence            3

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.4e-44  Score=353.53  Aligned_cols=252  Identities=23%  Similarity=0.321  Sum_probs=199.8

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..+.++|++.+.||+|+||.||+|..  +|+.||+|++......   ....+.|+..+..++||||+++++++.+.    
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----  100 (362)
T 2bdw_A           25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----  100 (362)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred             CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----
Confidence            34557899999999999999999998  5889999998654322   12234566666679999999999998776    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC---cEEE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVI  282 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~---~~kl  282 (443)
                      ...++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++   .+||
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~Dlkp~NIll~~~~~~~~~kl  172 (362)
T 2bdw_A          101 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN--------GIVHRNLKPENLLLASKAKGAAVKL  172 (362)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred             CEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCchHHEEEecCCCCCCEEE
Confidence            457999999999999998864 5689999999999999999999999        999999999999998654   5999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||++........     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.
T Consensus       173 ~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g----------~~Pf~  231 (362)
T 2bdw_A          173 ADFGLAIEVNDSEA-----WHGFAGTPGYLSPEVLKKD------PYSKPVDIWACGVILYILLVG----------YPPFW  231 (362)
T ss_dssp             CCCTTCBCCTTCCS-----CCCSCSCTTTCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCSSC
T ss_pred             eecCcceEecCCcc-----cccCCCCccccCHHHHccC------CCCchhhHHHHHHHHHHHHHC----------CCCCC
Confidence            99999976653221     2345799999999999876      677899999999999999999          67776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      +.     ....+...+......  .+.. ....++.++.+|+.+||+.||++|||+.++++.
T Consensus       232 ~~-----~~~~~~~~i~~~~~~--~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          232 DE-----DQHRLYAQIKAGAYD--YPSP-EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CS-----SHHHHHHHHHHTCCC--CCTT-GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CC-----CHHHHHHHHHhCCCC--CCcc-cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            53     223333333222221  1111 113456789999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.4e-45  Score=354.34  Aligned_cols=264  Identities=24%  Similarity=0.346  Sum_probs=203.8

Q ss_pred             ccc-cccceeeeecCeEEEEEEE------CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQI-SLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~-~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++| ++.+.||+|+||.||++.+      +++.||||++......  ......|+..+..++||||+++++++.+...  
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--  107 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA--  107 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT--
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC--
Confidence            455 9999999999999999876      4788999998754322  2223456666667999999999999887543  


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+++|+|.+++.+..+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~--------~ivH~Dikp~Nil~~~~~~~kl~Dfg  179 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ--------HYIHRDLAARNVLLDNDRLVKIGDFG  179 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred             ceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCchheEEEcCCCCEEECCcc
Confidence            4689999999999999999988899999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.......... .......||..|+|||.+.+.      .++.++||||||+++|||+||+          .||.....
T Consensus       180 ~a~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~----------~p~~~~~~  242 (318)
T 3lxp_A          180 LAKAVPEGHEYY-RVREDGDSPVFWYAPECLKEY------KFYYASDVWSFGVTLYELLTHC----------DSSQSPPT  242 (318)
T ss_dssp             GCEECCTTCSEE-EC---CCCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTT----------CGGGSHHH
T ss_pred             cccccccccccc-ccccCCCCCceeeChHHhcCC------CCCcHHHHHHHHHHHHHHHhCC----------Ccccccch
Confidence            998765432211 112334688899999999876      5567999999999999999994          44432100


Q ss_pred             ----------CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        367 ----------MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       367 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                                .......+...+. .......+     ..++.++.+|+.+||+.||++|||+.|+++.|+++.+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          243 KFLELIGIAQGQMTVLRLTELLE-RGERLPRP-----DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHHHHHCSCCHHHHHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcccccchhHHHHHHHHh-cccCCCCC-----ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence                      0000111112221 12222222     346678999999999999999999999999999987654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-44  Score=355.74  Aligned_cols=251  Identities=24%  Similarity=0.337  Sum_probs=190.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .++|++.+.||+|+||.||+++.  +++.||||++............|+..+..++||||+++++++.+.    ..+++|
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~~~~lv   94 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP----THLAII   94 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS----SEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC----CEEEEE
Confidence            36899999999999999999998  688999999876554444555677777779999999999999876    458999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc--EEEEecCCcc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAV  289 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~  289 (443)
                      |||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.  +||+|||+++
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~--------~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM--------QICHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence            999999999999854 6799999999999999999999998        9999999999999987765  9999999987


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCC-CccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~-~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ......     ......||+.|+|||++.+.      .++ .++|||||||++|||++|          ..||.......
T Consensus       167 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~ell~g----------~~Pf~~~~~~~  225 (361)
T 3uc3_A          167 SSVLHS-----QPKSTVGTPAYIAPEVLLRQ------EYDGKIADVWSCGVTLYVMLVG----------AYPFEDPEEPR  225 (361)
T ss_dssp             -------------------CTTSCHHHHHCS------SCCHHHHHHHHHHHHHHHHHHS----------SCSCC----CC
T ss_pred             cccccC-----CCCCCcCCCCcCChhhhcCC------CCCCCeeeeehhHHHHHHHHhC----------CCCCCCCccHH
Confidence            433221     12345799999999999765      333 348999999999999999          67776543222


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .....+.....   .....+.   ....+.++.+|+.+||+.||++|||+.|+++.
T Consensus       226 ~~~~~~~~~~~---~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          226 DYRKTIQRILS---VKYSIPD---DIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CHHHHHHHHHT---TCCCCCT---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHhc---CCCCCCC---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            22222222222   1222222   12355789999999999999999999999874

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.1e-44  Score=343.44  Aligned_cols=256  Identities=21%  Similarity=0.403  Sum_probs=192.0

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ..++|++.+.||+|+||.||+|.+.     +..||+|++......  ......|+..+..++||||+++++++.+.    
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----   88 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS----
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC----
Confidence            3478999999999999999999873     346999987653322  12234566677779999999999997543    


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        89 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~kl~D  159 (281)
T 1mp8_A           89 -PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--------RFVHRDIAARNVLVSSNDCVKLGD  159 (281)
T ss_dssp             -SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEECC
T ss_pred             -ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecccccHHHEEECCCCCEEECc
Confidence             36899999999999999974  3699999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHD  363 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~  363 (443)
                      ||+++........   ......+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||..
T Consensus       160 fg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~ell~~g----------~~pf~~  220 (281)
T 1mp8_A          160 FGLSRYMEDSTYY---KASKGKLPIKWMAPESINFR------RFTSASDVWMFGVCMWEILMHG----------VKPFQG  220 (281)
T ss_dssp             ----------------------CCGGGCCHHHHHHC------CCSHHHHHHHHHHHHHHHHTTS----------CCTTTT
T ss_pred             cccccccCccccc---ccccCCCcccccChhhcccC------CCCCccCchHHHHHHHHHHhcC----------CCCCCc
Confidence            9999776543211   11233577899999999765      66789999999999999997 7          667765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ..     .......+.. ......+     ..++..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus       221 ~~-----~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          221 VK-----NNDVIGRIEN-GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             CC-----GGGHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CC-----HHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            32     1222222222 2222222     346678999999999999999999999999999998653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.7e-44  Score=339.13  Aligned_cols=255  Identities=24%  Similarity=0.412  Sum_probs=205.2

Q ss_pred             hccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.+. +..||||++............|+..+..++||||+++++++...     ..++||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~   86 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT   86 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC-----CcEEEE
Confidence            478999999999999999999985 56899999876544444445666666679999999999997643     268999


Q ss_pred             cccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++|+|.+++...   .+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++..
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--------NYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            999999999999753   699999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........   .....+|..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.+.     
T Consensus       159 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g----------~~p~~~~-----  214 (279)
T 1qpc_A          159 IEDNEYTA---REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTHG----------RIPYPGM-----  214 (279)
T ss_dssp             CSSSCEEC---CTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTT----------CCSSTTC-----
T ss_pred             ccCccccc---ccCCCCccCccChhhhccC------CCCchhhhHHHHHHHHHHHhCC----------CCCCccc-----
Confidence            65432211   2234577899999999765      56689999999999999999 7          6677653     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ........+.. ......+     ..++.++.+++.+||+.||++|||+.++++.|+++....
T Consensus       215 ~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          215 TNPEVIQNLER-GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHhc-ccCCCCc-----ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            22333333322 2222222     346678999999999999999999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.6e-44  Score=343.63  Aligned_cols=264  Identities=30%  Similarity=0.483  Sum_probs=195.8

Q ss_pred             hhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +...++|++.+.||+|+||.||+|++.+ .||||++......   ......|+..+..++||||++++++....     .
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~   93 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-----Q   93 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----S
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC-----c
Confidence            4445789999999999999999998765 5999988654322   12234667777779999999999976443     3


Q ss_pred             EEeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++++|.+++.  ...+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~--------~i~H~Dlkp~Nil~~~~~~~kl~Dfg  165 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK--------SIIHRDLKSNNIFLHEDNTVKIGDFG  165 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccccCccceEEECCCCCEEEccce
Confidence            689999999999999995  35699999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++..........  ......||+.|+|||.+.....   ..++.++||||||+++|||++|          ..||.... 
T Consensus       166 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g----------~~p~~~~~-  229 (289)
T 3og7_A          166 LATEKSRWSGSH--QFEQLSGSILWMAPEVIRMQDS---NPYSFQSDVYAFGIVLYELMTG----------QLPYSNIN-  229 (289)
T ss_dssp             --------------------CCCTTCCHHHHC-------CCSCHHHHHHHHHHHHHHHHHS----------SCTTSSCC-
T ss_pred             eccccccccccc--cccccCCCccccCchhhcccCC---CCCCcccchHHHHHHHHHHHHC----------CCCccccc-
Confidence            997654322111  1234578999999999863211   1567899999999999999999          77776532 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                         ....+...+......+..+.  ....++..+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       230 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          230 ---NRDQIIEMVGRGSLSPDLSK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             ---CHHHHHHHHHHTSCCCCTTS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ---hHHHHHHHhcccccCcchhh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence               23344444433333332221  224567889999999999999999999999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.1e-44  Score=350.50  Aligned_cols=252  Identities=25%  Similarity=0.372  Sum_probs=195.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||+|.+  +++.||||++......  ......|+..+..++||||+++++++.+.    ...+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----~~~~   81 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG----NIQY   81 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS----SEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC----CeEE
Confidence            47899999999999999999988  5889999998644321  12234455555669999999999998776    4579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------givH~Dlkp~NIll~~~~~~kl~Dfg~a~  153 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--------GITHRDIKPENLLLDERDNLKISDFGLAT  153 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccccchHHEEEeCCCCEEEEEeeccc
Confidence            99999999999999975 4799999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .+.......  ......||+.|+|||++.+..     ..+.++|||||||++|||++|          ..||.....   
T Consensus       154 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~ll~g----------~~pf~~~~~---  213 (323)
T 3tki_A          154 VFRYNNRER--LLNKMCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAG----------ELPWDQPSD---  213 (323)
T ss_dssp             ECEETTEEC--CBCSCCSCGGGSCHHHHHCSS-----BCHHHHHHHHHHHHHHHHHHS----------SCSCSSSCT---
T ss_pred             eeccCCccc--ccCCCccCcCccCcHHhccCC-----CCCCcccHHHHHHHHHHHHhC----------CCCCCCCch---
Confidence            664322211  123457999999999997652     124689999999999999999          677765422   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...........   ....+.   ...++..+.+|+.+||+.||++|||+.|+++.
T Consensus       214 ~~~~~~~~~~~---~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          214 SCQEYSDWKEK---KTYLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             TSHHHHHHHTT---CTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHHhcc---cccCCc---cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            11222222211   111111   13456789999999999999999999999763

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=8.1e-45  Score=351.72  Aligned_cols=255  Identities=23%  Similarity=0.440  Sum_probs=198.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCce----eEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGEN----VAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~----vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+  +++.    ||+|.+......  ......|+..+..++||||+++++++...     
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----   87 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS-----   87 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence            6899999999999999999998  4554    777776433211  11223455555668999999999998543     


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++||||+++|+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dikp~Nil~~~~~~~kl~Df  159 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--------GMVHRNLAARNVLLKSPSQVQVADF  159 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT--------TCCCSCCSSTTEEESSSSCEEECSC
T ss_pred             ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC--------CCCCCccchheEEECCCCeEEECCC
Confidence            36899999999999999965  4799999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.........  ......||..|+|||++.+.      .++.++||||||+++|||+| |          ..||...
T Consensus       160 g~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~~g----------~~p~~~~  221 (325)
T 3kex_A          160 GVADLLPPDDKQL--LYSEAKTPIKWMALESIHFG------KYTHQSDVWSYGVTVWELMTFG----------AEPYAGL  221 (325)
T ss_dssp             SGGGGSCCCTTCC--C-----CCTTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTS
T ss_pred             CcccccCcccccc--cccCCCCcccccChHHhccC------CCChhhHhHHhHHHHHHHHhCC----------CCCcccc
Confidence            9998765433221  12345688899999999876      67789999999999999999 8          6777654


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      .     ...+...+.. ......+.     .++..+.+++.+||+.||++|||+.++++.|+++....
T Consensus       222 ~-----~~~~~~~~~~-~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          222 R-----LAEVPDLLEK-GERLAQPQ-----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             C-----TTHHHHHHHT-TCBCCCCT-----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             C-----HHHHHHHHHc-CCCCCCCC-----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            2     2233333322 22233332     24456899999999999999999999999999997654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3.5e-44  Score=355.44  Aligned_cols=243  Identities=22%  Similarity=0.333  Sum_probs=191.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|+.  +++.||||++.....      .....|.+++... .+||||+++++++.+.    .
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~-~~hp~Iv~l~~~~~~~----~  126 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA-SNHPFLVGLHSCFQTE----S  126 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHH-TTCTTBCCEEEEEECS----S
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhc-CCCCCcCeeEEEEEEC----C
Confidence            6899999999999999999998  578999999875321      1233344444332 4899999999998876    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++||||+++|+|..++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDLKp~NILl~~~g~ikL~DFG  198 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYRDLKLDNVLLDSEGHIKLTDYG  198 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEeccCCHHHEEECCCCCEEEeecc
Confidence            68999999999999999865 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......    .....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.....
T Consensus       199 la~~~~~~~~----~~~~~~gt~~Y~aPE~l~~~------~~~~~~DiwslGvllyell~G----------~~Pf~~~~~  258 (396)
T 4dc2_A          199 MCKEGLRPGD----TTSTFCGTPNYIAPEILRGE------DYGFSVDWWALGVLMFEMMAG----------RSPFDIVGS  258 (396)
T ss_dssp             TCBCCCCTTC----CBCCCCBCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSTTTTC
T ss_pred             eeeecccCCC----ccccccCCcccCCchhhcCC------CCChHHHHHHHHHHHHHHHhC----------CCCCccccc
Confidence            9975332211    22456899999999999876      677899999999999999999          566643211


Q ss_pred             C----CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        367 M----DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       367 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      .    ......+...+..  ....+|     ...+.++.+||++||+.||++||++
T Consensus       259 ~~~~~~~~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          259 SDNPDQNTEDYLFQVILE--KQIRIP-----RSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ------CCHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ccccchhhHHHHHHHHhc--cccCCC-----CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            1    1122333333322  223333     2356789999999999999999985

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.4e-44  Score=343.45  Aligned_cols=265  Identities=20%  Similarity=0.210  Sum_probs=204.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||||++..... .....|.+  .+..+ +|+||+++++++...    ...
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~--~~~~l~~~~~i~~~~~~~~~~----~~~   81 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYR--TYKLLAGCTGIPNVYYFGQEG----LHN   81 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHH--HHHHTTTCTTCCCEEEEEEET----TEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHH--HHHHHhcCCCCCeEEeecCCC----cee
Confidence            447899999999999999999996  689999998865432 33444444  44446 899999999998665    457


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-----EEE
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----CVI  282 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-----~kl  282 (443)
                      ++||||+ +|+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.     +||
T Consensus        82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~NIl~~~~~~~~~~~~kl  152 (298)
T 1csn_A           82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK--------SLVYRDIKPDNFLIGRPNSKNANMIYV  152 (298)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred             EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence            9999999 8999999974  4699999999999999999999998        9999999999999987775     999


Q ss_pred             EecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        283 ADFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +|||+++..........   .......||+.|+|||.+.+.      .++.++||||||+++|||++|          ..
T Consensus       153 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g----------~~  216 (298)
T 1csn_A          153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR------EQSRRDDLEALGHVFMYFLRG----------SL  216 (298)
T ss_dssp             CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EECccccccccccccccccccCccCCCCCcccCCchhhcCC------CCChHHHHHHHHHHHHHHHcC----------CC
Confidence            99999987665432211   123455799999999999876      677899999999999999999          77


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ||......  ........+......+..+.  ....++.++.+++.+||+.||++|||+.+|++.|+++.+...
T Consensus       217 pf~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          217 PWQGLKAA--TNKQKYERIGEKKQSTPLRE--LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             TTSSCCSC--CHHHHHHHHHHHHHHSCHHH--HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             Ccchhhcc--ccHHHHHHHHhhccCccHHH--HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            77664221  11222111111111111110  012356789999999999999999999999999999987643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.9e-44  Score=346.70  Aligned_cols=256  Identities=23%  Similarity=0.398  Sum_probs=203.9

Q ss_pred             hccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|.+.+.||+|+||.||+|..       ++..||||++.......  .....|+..+..++||||+++++++.+..  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--   99 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--   99 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence            47899999999999999999986       24789999986543222  22345677777799999999999987763  


Q ss_pred             ccEEEeeecccCcccHHHHhccc-------------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCC
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNRT-------------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP  260 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~~-------------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~  260 (443)
                        ..++||||+++|+|.+++...                         .+++.+++.++.||+.||.|||+.        
T Consensus       100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------  169 (314)
T 2ivs_A          100 --PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM--------  169 (314)
T ss_dssp             --SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred             --ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC--------
Confidence              469999999999999999642                         388999999999999999999999        


Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHH
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV  340 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvv  340 (443)
                      +|+||||||+|||++.++.+||+|||+++.........  ......+|+.|+|||.+.+.      .++.++||||||++
T Consensus       170 ~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~i  241 (314)
T 2ivs_A          170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV--KRSQGRIPVKWMAIESLFDH------IYTTQSDVWSFGVL  241 (314)
T ss_dssp             TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE--CSSCCCSCGGGCCHHHHHHC------EECHHHHHHHHHHH
T ss_pred             CCcccccchheEEEcCCCCEEEccccccccccccccce--eccCCCCcccccChhhhcCC------CcCchhhHHHHHHH
Confidence            99999999999999999999999999997665432211  12334678899999999875      56689999999999


Q ss_pred             HHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        341 LWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       341 l~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +|||++ |          ..||....     ...+...+.. ...+..+     ..++..+.+++.+||+.||++|||+.
T Consensus       242 l~el~t~g----------~~p~~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~  300 (314)
T 2ivs_A          242 LWEIVTLG----------GNPYPGIP-----PERLFNLLKT-GHRMERP-----DNCSEEMYRLMLQCWKQEPDKRPVFA  300 (314)
T ss_dssp             HHHHHTTS----------CCSSTTCC-----GGGHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCC----------CCCCCCCC-----HHHHHHHhhc-CCcCCCC-----ccCCHHHHHHHHHHccCChhhCcCHH
Confidence            999999 7          66776542     2233333322 2222222     34667899999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q psy14889        420 RVKKTLIKLACA  431 (443)
Q Consensus       420 evl~~L~~l~~~  431 (443)
                      ++++.|+++...
T Consensus       301 ~l~~~l~~~~~~  312 (314)
T 2ivs_A          301 DISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhh
Confidence            999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-44  Score=351.87  Aligned_cols=260  Identities=23%  Similarity=0.372  Sum_probs=201.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSR  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~  203 (443)
                      ..++|.+.+.||+|+||.||+|.+       ++..||||++.....  .......|+..+..+ +||||+++++++....
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            347899999999999999999996       245799999864322  222334566666668 8999999999988764


Q ss_pred             CcccEEEeeecccCcccHHHHhccc------------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNRT------------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGK  259 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~~------------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~  259 (443)
                          .+++||||+++|+|.+++...                        .+++..++.++.||+.||.|||+.       
T Consensus       123 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-------  191 (344)
T 1rjb_A          123 ----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-------  191 (344)
T ss_dssp             ----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred             ----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-------
Confidence                469999999999999999642                        278999999999999999999999       


Q ss_pred             CCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHH
Q psy14889        260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL  339 (443)
Q Consensus       260 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gv  339 (443)
                       +|+||||||+|||++.++.+||+|||++..........  ......||+.|+|||.+.+.      .++.++||||||+
T Consensus       192 -~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~  262 (344)
T 1rjb_A          192 -SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV--VRGNARLPVKWMAPESLFEG------IYTIKSDVWSYGI  262 (344)
T ss_dssp             -TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE--EETTEEECGGGCCHHHHHHC------CCCHHHHHHHHHH
T ss_pred             -CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccce--eccCccCccCccCHHHhccC------CCChhHhHHHHHH
Confidence             99999999999999999999999999997665432211  12344678899999999776      6778999999999


Q ss_pred             HHHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        340 VLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       340 vl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      ++|||+| |          ..||.....    ...+...+. ....+..+     ..++.++.+|+.+||+.||.+|||+
T Consensus       263 il~el~t~g----------~~p~~~~~~----~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~  322 (344)
T 1rjb_A          263 LLWEIFSLG----------VNPYPGIPV----DANFYKLIQ-NGFKMDQP-----FYATEEIYIIMQSCWAFDSRKRPSF  322 (344)
T ss_dssp             HHHHHTTTS----------CCSSTTCCC----SHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHcCC----------CCCcccCCc----HHHHHHHHh-cCCCCCCC-----CCCCHHHHHHHHHHcCCCchhCcCH
Confidence            9999998 7          667765421    223333332 22223222     2356789999999999999999999


Q ss_pred             HHHHHHHHHHhhccc
Q psy14889        419 LRVKKTLIKLACADM  433 (443)
Q Consensus       419 ~evl~~L~~l~~~~~  433 (443)
                      .++++.|+.+.....
T Consensus       323 ~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          323 PNLTSFLGCQLADAE  337 (344)
T ss_dssp             HHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.8e-44  Score=356.74  Aligned_cols=253  Identities=19%  Similarity=0.270  Sum_probs=188.9

Q ss_pred             cccccc-ceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLS-ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~-~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|.+. +.||+|+||.||+|.+  +|+.||||++...  ....+|.++... ..+||||+++++++.........+++|
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~E~~~~~~-~~~hp~iv~l~~~~~~~~~~~~~~~lv  137 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWR-ASQCPHIVRIVDVYENLYAGRKCLLIV  137 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHH-HTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--hhHHHHHHHHHH-hcCCCCcceEeEEEeecccCCcEEEEE
Confidence            567766 7899999999999998  5889999998532  233445554433 368999999999986533223568999


Q ss_pred             ecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CCcEEEEecC
Q psy14889        213 THYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFG  286 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfG  286 (443)
                      |||+++|+|.+++...   .+++..+..++.||+.||.|||+.        +|+||||||+|||++.   ++.+||+|||
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--------NIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCcCcceEEEecCCCCccEEEEecc
Confidence            9999999999999753   599999999999999999999998        9999999999999998   7899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.....
T Consensus       210 ~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~pf~~~~~  268 (400)
T 1nxk_A          210 FAKETTSHNS-----LTTPCYTPYYVAPEVLGPE------KYDKSCDMWSLGVIMYILLCG----------YPPFYSNHG  268 (400)
T ss_dssp             TCEECC----------------CTTCCGGGSCCC------CSSSHHHHHHHHHHHHHHHHS----------SCSCCCCTT
T ss_pred             cccccCCCCc-----cccCCCCCCccCHhhcCCC------CCCCcccHHHHHHHHHHHHhC----------CCCCCCCcc
Confidence            9976543221     2345789999999999765      677899999999999999999          666655432


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...... +...+.........+ .  ...++.++.+||.+||+.||++|||+.|+++.
T Consensus       269 ~~~~~~-~~~~i~~~~~~~~~~-~--~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          269 LAISPG-MKTRIRMGQYEFPNP-E--WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CSSCCS-HHHHHHHTCCCCCTT-T--TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccccHH-HHHHHHcCcccCCCc-c--cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            221111 222222222211111 1  12366789999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.5e-44  Score=353.62  Aligned_cols=249  Identities=19%  Similarity=0.314  Sum_probs=195.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc------cchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      +.+.|++.+.||+|+||.||+|..  +|+.||||++.....      .......|+..+..++||||+++++++.+.   
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---   98 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD---   98 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence            457899999999999999999988  589999999854211      122234556666669999999999998776   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-  279 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-  279 (443)
                       ..+++||||+++|+|.+++..     ..+++..+..++.||+.||.|||++        +|+||||||+|||++.++. 
T Consensus        99 -~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivHrDlkp~NIl~~~~~~~  169 (351)
T 3c0i_A           99 -GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN--------NIIHRDVKPHCVLLASKENS  169 (351)
T ss_dssp             -TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECSSSTT
T ss_pred             -CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCChHHeEEecCCCC
Confidence             468999999999999888753     2489999999999999999999999        9999999999999987654 


Q ss_pred             --EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        280 --CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       280 --~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                        +||+|||+++........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          
T Consensus       170 ~~vkl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g----------  229 (351)
T 3c0i_A          170 APVKLGGFGVAIQLGESGLV----AGGRVGTPHFMAPEVVKRE------PYGKPVDVWGCGVILFILLSG----------  229 (351)
T ss_dssp             CCEEECCCTTCEECCTTSCB----CCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------
T ss_pred             CcEEEecCcceeEecCCCee----ecCCcCCcCccCHHHHcCC------CCCchHhhHHHHHHHHHHHHC----------
Confidence              999999999876543221    2345799999999999876      667899999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..||...      .......+....... .+..|  ..++.++.+|+.+||+.||++|||+.|+++
T Consensus       230 ~~pf~~~------~~~~~~~i~~~~~~~-~~~~~--~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          230 CLPFYGT------KERLFEGIIKGKYKM-NPRQW--SHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             SCSSCSS------HHHHHHHHHHTCCCC-CHHHH--TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCc------HHHHHHHHHcCCCCC-Ccccc--ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6777652      222322222211111 11000  235678999999999999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.7e-44  Score=351.88  Aligned_cols=243  Identities=23%  Similarity=0.374  Sum_probs=195.2

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|.+.+.||+|+||.||+|++  +|+.||||++....      ......|.+++... .+||||+++++++.+.    
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~hp~iv~l~~~~~~~----   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHMFCTFQTK----   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH-TTCTTBCCEEEEEECS----
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhc-CCCCCCCcEEEEEEeC----
Confidence            37899999999999999999998  58899999986532      12223344444332 4999999999999876    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+||
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~g~vkL~DF  162 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--------GIVYRDLKLDNILLDKDGHIKIADF  162 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCCCChhhEEECCCCCEEEeEC
Confidence            458999999999999999975 6799999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.......    .....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||... 
T Consensus       163 G~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~Pf~~~-  221 (345)
T 1xjd_A          163 GMCKENMLGDA----KTNTFCGTPDYIAPEILLGQ------KYNHSVDWWSFGVLLYEMLIG----------QSPFHGQ-  221 (345)
T ss_dssp             TTCBCCCCTTC----CBCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCS-
T ss_pred             hhhhhcccCCC----cccCCCCCcccCChhhhcCC------CCCChhhhHHHHHHHHHHhcC----------CCCCCCC-
Confidence            99975432211    12456899999999999876      677899999999999999999          7777653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH-HHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL-RVK  422 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl  422 (443)
                          ....+...+...  .+.+|     ...+.++.+|+.+||+.||++||++. +++
T Consensus       222 ----~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          222 ----DEEELFHSIRMD--NPFYP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             ----SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             ----CHHHHHHHHHhC--CCCCC-----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                233333333222  23333     23567899999999999999999987 654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.2e-44  Score=346.13  Aligned_cols=259  Identities=23%  Similarity=0.392  Sum_probs=204.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeeccccC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTSR  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~  203 (443)
                      ..++|++.+.||+|+||.||+|.+       +++.||||++......  ......|+..+..+ +||||+++++++....
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            347899999999999999999985       3578999998654322  12234566666668 9999999999998764


Q ss_pred             CcccEEEeeecccCcccHHHHhccc-------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEE
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNRT-------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAH  264 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~~-------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiH  264 (443)
                          ..++||||+++|+|.+++...                   .+++..++.++.|++.||.|||+.        +|+|
T Consensus       101 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H  168 (313)
T 1t46_A          101 ----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK--------NCIH  168 (313)
T ss_dssp             ----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--------TCCC
T ss_pred             ----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC--------Ceec
Confidence                369999999999999999643                   389999999999999999999999        9999


Q ss_pred             eCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHH
Q psy14889        265 RDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV  344 (443)
Q Consensus       265 rDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~el  344 (443)
                      |||||+|||++.++.+||+|||+++.........  ......||+.|+|||.+.+.      .++.++||||||+++|||
T Consensus       169 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el  240 (313)
T 1t46_A          169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMAPESIFNC------VYTFESDVWSYGIFLWEL  240 (313)
T ss_dssp             SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSE--ECSSSEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCCEEEccccccccccccccce--eccCCCCcceeeChHHhcCC------CCChHHHHHHHHHHHHHH
Confidence            9999999999999999999999997765432211  12334678899999998776      677899999999999999


Q ss_pred             Hh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        345 CR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       345 lt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +| |          ..||....    ........+.. ...+..+     ...+..+.+++.+||+.||.+|||+.|+++
T Consensus       241 lt~g----------~~p~~~~~----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          241 FSLG----------SSPYPGMP----VDSKFYKMIKE-GFRMLSP-----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             HTTT----------CCSSTTCC----SSHHHHHHHHH-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCC----------CCCCCccc----chhHHHHHhcc-CCCCCCc-----ccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            99 7          66776532    11223333322 2222222     335678999999999999999999999999


Q ss_pred             HHHHHhhcc
Q psy14889        424 TLIKLACAD  432 (443)
Q Consensus       424 ~L~~l~~~~  432 (443)
                      .|+++....
T Consensus       301 ~L~~~~~~~  309 (313)
T 1t46_A          301 LIEKQISES  309 (313)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999988653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.6e-44  Score=347.38  Aligned_cols=250  Identities=19%  Similarity=0.261  Sum_probs=198.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-------chHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-------SWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .+.+.|.+.+.||+|+||.||+|..  +|+.||+|++......       ....+.|+..+..++||||+++++++.+. 
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-   86 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-   86 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-
Confidence            3457899999999999999999998  5899999988654321       22334566666679999999999998765 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----  278 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----  278 (443)
                         ..+++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++    
T Consensus        87 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dlkp~NIll~~~~~~~~  155 (326)
T 2y0a_A           87 ---TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL--------QIAHFDLKPENIMLLDRNVPKP  155 (326)
T ss_dssp             ---SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESCSSSSSC
T ss_pred             ---CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC--------CeEcCCCCHHHEEEecCCCCCC
Confidence               458999999999999999964 5699999999999999999999998        999999999999999887    


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          .
T Consensus       156 ~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g----------~  214 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNE-----FKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG----------A  214 (326)
T ss_dssp             CEEECCCTTCEECCTTSC-----CCCCCSCTTTCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------C
T ss_pred             CEEEEECCCCeECCCCCc-----cccccCCcCcCCceeecCC------CCCcHHHHHHHHHHHHHHHHC----------c
Confidence            899999999987653221     2345799999999999765      677899999999999999999          6


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .||...     ........+....  ...+.. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       215 ~pf~~~-----~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          215 SPFLGD-----TKQETLANVSAVN--YEFEDE-YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CSSCCS-----SHHHHHHHHHHTC--CCCCHH-HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCC-----CHHHHHHHHHhcC--CCcCcc-ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            777553     2222222222111  111110 01234577999999999999999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=7.8e-45  Score=347.65  Aligned_cols=269  Identities=22%  Similarity=0.337  Sum_probs=201.1

Q ss_pred             hccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+.|++.+.||+|+||.||+|++      +++.||||++......  ....+.|+..+..++||||+++++++.....  
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--   97 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG--   97 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC--
Confidence            36799999999999999999985      5789999998654322  2333566777777999999999999876543  


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..+++||||+++|+|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~kl~D  169 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--------QYVHRDLAARNVLVESEHQVKIGD  169 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEEETTEEEECC
T ss_pred             ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC--------CcccCCCchheEEEcCCCCEEECc
Confidence            347899999999999999943  5699999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc----ccCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE----EYKAP  360 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~----~~~~P  360 (443)
                      ||++.......... .......||..|+|||.+.+.      .++.++||||||+++|||+||+.|+....    ....|
T Consensus       170 fg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  242 (302)
T 4e5w_A          170 FGLTKAIETDKEYY-TVKDDRDSPVFWYAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGP  242 (302)
T ss_dssp             CTTCEECCTTCCEE-ECCCCTTCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred             ccccccccCCCcce-eccCCCCCCccccCCeeecCC------CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCC
Confidence            99998765433211 112345688899999999776      55679999999999999999954421100    00011


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      +..    ..........+. ...+...+     ..++..+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       243 ~~~----~~~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          243 THG----QMTVTRLVNTLK-EGKRLPCP-----PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             CCG----GGHHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             ccc----ccCHHHHHHHHh-ccCCCCCC-----CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            111    111122222222 12222222     3466789999999999999999999999999998863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-44  Score=348.67  Aligned_cols=263  Identities=24%  Similarity=0.362  Sum_probs=200.8

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC------CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      ...++|++.+.||+|+||.||+|.+.      +..||||++......  ......|+..+..++||||+++++++...  
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  118 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY--  118 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC--
Confidence            34478999999999999999999873      235999998654322  22234566677779999999999998765  


Q ss_pred             cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                        ...++||||+++|+|.+++..  ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||
T Consensus       119 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dikp~NIl~~~~~~~kl  188 (333)
T 1mqb_A          119 --KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM--------NYVHRDLAARNILVNSNLVCKV  188 (333)
T ss_dssp             --SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEE
T ss_pred             --CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCChheEEECCCCcEEE
Confidence              347999999999999999964  5699999999999999999999999        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPY  361 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~  361 (443)
                      +|||+++......... .......+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||
T Consensus       189 ~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g----------~~pf  251 (333)
T 1mqb_A          189 SDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAISYR------KFTSASDVWSFGIVMWEVMTYG----------ERPY  251 (333)
T ss_dssp             CCCCC------------------CCCGGGSCHHHHHSC------CCCHHHHHHHHHHHHHHHHTTS----------CCTT
T ss_pred             CCCCcchhhccccccc-cccCCCCccccccCchhcccC------CCCchhhhHHHHHHHHHHHcCC----------CCCc
Confidence            9999998765432211 111233567889999999765      67789999999999999999 8          6777


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccccc
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYI  435 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~  435 (443)
                      .+.     ....+...+.. ..+...+     ..++..+.+++.+||+.||++|||+.++++.|+++.......
T Consensus       252 ~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~  314 (333)
T 1mqb_A          252 WEL-----SNHEVMKAIND-GFRLPTP-----MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL  314 (333)
T ss_dssp             TTC-----CHHHHHHHHHT-TCCCCCC-----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred             ccC-----CHHHHHHHHHC-CCcCCCc-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence            653     22333333322 2222222     336678999999999999999999999999999988765544

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.6e-44  Score=349.00  Aligned_cols=265  Identities=19%  Similarity=0.311  Sum_probs=191.0

Q ss_pred             hccccccceeeeecCeEEEEEEEC--C---ceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCc-
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH--G---ENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNS-  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~-  205 (443)
                      .++|++.+.||+|+||.||+|.+.  +   ..||||++....   ........|+..+..++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            468999999999999999999873  2   279999886532   1222334666677779999999999998765432 


Q ss_pred             -ccEEEeeecccCcccHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        206 -CTQLWLVTHYHSFGSLYDHLNRT-------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       206 -~~~~~lv~e~~~~gsL~~~l~~~-------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                       ....++||||+.+|+|.+++...       .+++..+..++.|++.||.|||+.        +|+||||||+|||++.+
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR--------NFIHRDLAARNCMLAED  173 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTT
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC--------CcccCCCCcceEEEcCC
Confidence             11248999999999999998532       589999999999999999999999        99999999999999999


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEE  356 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~  356 (443)
                      +.+||+|||+++.........  ......+|+.|+|||.+.+.      .++.++|||||||++|||++ |         
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~~g---------  236 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYR--QGCASKLPVKWLALESLADN------LYTVHSDVWAFGVTMWEIMTRG---------  236 (323)
T ss_dssp             SCEEECCCCC-------------------CCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS---------
T ss_pred             CCEEEeecccccccccccccc--ccccccCcccccCchhhcCC------CCCCccchhhHHHHHHHHHhCC---------
Confidence            999999999997665432211  12234577899999999876      67789999999999999999 7         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                       ..||.+..     .......+.. ......+     ..++.++.+++.+||+.||++|||+.++++.|+++.....-..
T Consensus       237 -~~p~~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          237 -QTPYAGIE-----NAEIYNYLIG-GNRLKQP-----PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             -CCTTTTCC-----GGGHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             -CCCccccC-----hHHHHHHHhc-CCCCCCC-----CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence             66776532     2223332222 2222222     3356789999999999999999999999999999987664443

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.8e-44  Score=372.06  Aligned_cols=259  Identities=24%  Similarity=0.365  Sum_probs=207.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ...++|++.+.||+|+||.||+|.+. +..||||++............|+..+..++||||+++++++.+.     .+++
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~l  338 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYI  338 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEE
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeec-----cceE
Confidence            34567999999999999999999995 46799999876544333445566666669999999999998653     3689


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+.+|+|.+++..   ..+++.+++.++.||+.||+|||++        +|+||||||+|||++.++.+||+|||++
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DFG~a  410 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--------NYVHRDLRAANILVGENLVCKVADFGLA  410 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence            9999999999999964   4599999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........   .....++..|+|||++...      .++.++|||||||+||||++ |          ..||.+.   
T Consensus       411 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~sDvwSlGv~l~el~t~g----------~~P~~~~---  468 (535)
T 2h8h_A          411 RLIEDNEYTA---RQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELTTKG----------RVPYPGM---  468 (535)
T ss_dssp             TTCCCHHHHT---TCSTTSCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHTTTT----------CCSSTTC---
T ss_pred             eecCCCceec---ccCCcCcccccCHHHhccC------CCCchhhHHHHHHHHHHHHhCC----------CCCCCCC---
Confidence            8765322111   1233577899999999876      67789999999999999999 7          6777654   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                        ...++...+.. ..+...+     ..++..+.+||.+||+.||++|||+.+|++.|+.+......
T Consensus       469 --~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          469 --VNREVLDQVER-GYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             --CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             --CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence              23334333322 2233333     34677899999999999999999999999999998765543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=8.1e-44  Score=343.55  Aligned_cols=241  Identities=21%  Similarity=0.318  Sum_probs=195.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||+|++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----~~~   81 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA----QQI   81 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS----SEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC----CEE
Confidence            6899999999999999999998  589999999865321    112223455556669999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~g~~kL~Dfg~a  153 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK--------DIIYRDLKPENILLDKNGHIKITDFGFA  153 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCChheEEEcCCCCEEEeecCcc
Confidence            999999999999999965 6799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.....       .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.    
T Consensus       154 ~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~pf~~~----  206 (318)
T 1fot_A          154 KYVPDV-------TYTLCGTPDYIAPEVVSTK------PYNKSIDWWSFGILIYEMLAG----------YTPFYDS----  206 (318)
T ss_dssp             EECSSC-------BCCCCSCTTTCCHHHHTTC------CBCTTHHHHHHHHHHHHHHHS----------SCTTCCS----
T ss_pred             eecCCc-------cccccCCccccCHhHhcCC------CCCcccchhhhHHHHHHHHhC----------CCCCCCC----
Confidence            765432       1345799999999999876      677899999999999999999          7777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                       ........+...  ...+|     ...+.++.+++.+||+.||++||     +++++++
T Consensus       207 -~~~~~~~~i~~~--~~~~p-----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          207 -NTMKTYEKILNA--ELRFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CHHHHHHHHHhC--CCCCC-----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence             222222222221  22233     23557899999999999999999     8888874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.3e-44  Score=355.48  Aligned_cols=273  Identities=19%  Similarity=0.274  Sum_probs=208.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++......  ......|+..+..++||||+++++++.....  ...+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~~~   85 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT--RHKV   85 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT--CCEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCC--CeeE
Confidence            47899999999999999999998  4899999998653321  1222356666666999999999999876543  3579


Q ss_pred             eeecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----cCCCcEEE
Q psy14889        211 LVTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVI  282 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----~~~~~~kl  282 (443)
                      +||||+++|+|.+++...    .+++..++.++.||+.||+|||+.        +|+||||||+|||+    +.++.+||
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--------GIVHRNIKPGNIMRVIGEDGQSVYKL  157 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEEEECTTSCEEEEE
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CEEECCcCHHHEEEeecCCCceeEEE
Confidence            999999999999999753    299999999999999999999999        99999999999999    77788999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccC--cCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMD--CFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      +|||+++........     ....||+.|+|||++.+.....  ...++.++|||||||++|||++|          ..|
T Consensus       158 ~DFG~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg----------~~P  222 (396)
T 4eut_A          158 TDFGAARELEDDEQF-----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG----------SLP  222 (396)
T ss_dssp             CCGGGCEECCCGGGS-----SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHS----------SCS
T ss_pred             ecCCCceEccCCCcc-----ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHC----------CCC
Confidence            999999876543321     2357999999999986521000  00445789999999999999999          666


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCC----------------CCCC-CCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQR----------------PVLP-NRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |..........+.+.+........                ..++ ........+..+.+++.+||+.||++|||+.++++
T Consensus       223 f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             EECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            665433333344444433211100                0011 11123567788999999999999999999999999


Q ss_pred             HHHHHhhcc
Q psy14889        424 TLIKLACAD  432 (443)
Q Consensus       424 ~L~~l~~~~  432 (443)
                      .++++.+..
T Consensus       303 ~l~~il~~~  311 (396)
T 4eut_A          303 ETSDILHRM  311 (396)
T ss_dssp             HHHHHHTCE
T ss_pred             HHHHHhhce
Confidence            999988653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.8e-44  Score=339.85  Aligned_cols=251  Identities=28%  Similarity=0.508  Sum_probs=196.5

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||+|.++|+.||||++.... .......|+..+..++||||+++++++....   ...++||||
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~lv~e~   96 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK---GGLYIVTEY   96 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECC
T ss_pred             hhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC---CceEEEEec
Confidence            689999999999999999999999999999886543 2223345666667799999999999876543   246999999


Q ss_pred             cCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++|+|.+++...   .+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++....
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--------NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            9999999999653   389999999999999999999999        99999999999999999999999999987554


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ...       ....+++.|+|||.+.+.      .++.++||||||+++|||+| |          ..||...     ..
T Consensus       169 ~~~-------~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~t~g----------~~p~~~~-----~~  220 (278)
T 1byg_A          169 STQ-------DTGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFG----------RVPYPRI-----PL  220 (278)
T ss_dssp             --------------CCTTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCSCTTS-----CG
T ss_pred             ccc-------cCCCccccccCHHHhCCC------CCCchhcHHHHHHHHHHHHhCC----------CCCCCCC-----CH
Confidence            321       223578899999999765      67789999999999999998 7          6666553     12


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      ......+.. ...+..+     ..++..+.+++.+||+.||++|||+.++++.|+++....
T Consensus       221 ~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          221 KDVVPRVEK-GYKMDAP-----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             GGHHHHHTT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-CCCCCCc-----ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            222222221 1222222     346678999999999999999999999999999987654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.9e-44  Score=349.43  Aligned_cols=258  Identities=25%  Similarity=0.322  Sum_probs=194.9

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ..+.++|++.+.||+|+||.||+|..  +++.||+|++....      ........|+..+..++||||+++++++.+. 
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-  100 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE-  100 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC-
Confidence            34568899999999999999999998  57899999986432      1122334566666679999999999999776 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-----------------------------------------cCCCHHHHHHHHHHH
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-----------------------------------------TTLNHHQMMKICLSI  242 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-----------------------------------------~~l~~~~~~~i~~qi  242 (443)
                         ...++||||+++|+|.+++..                                         ..+++..+..++.||
T Consensus       101 ---~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A          101 ---QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ---SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ---CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence               458999999999999999851                                         123567788999999


Q ss_pred             HHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC--cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccc
Q psy14889        243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG--TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDES  320 (443)
Q Consensus       243 a~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  320 (443)
                      +.||+|||+.        +|+||||||+|||++.++  .+||+|||+++.+...............||+.|+|||++.+.
T Consensus       178 ~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  249 (345)
T 3hko_A          178 FSALHYLHNQ--------GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT  249 (345)
T ss_dssp             HHHHHHHHHT--------TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS
T ss_pred             HHHHHHHHHC--------CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC
Confidence            9999999999        999999999999998776  899999999987654333222223455799999999998753


Q ss_pred             cccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHH
Q psy14889        321 INMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAM  400 (443)
Q Consensus       321 ~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  400 (443)
                      ..    .++.++||||||+++|||++|          ..||....    ..+...... ........+.   ....+..+
T Consensus       250 ~~----~~~~~~DiwslG~il~el~~g----------~~pf~~~~----~~~~~~~~~-~~~~~~~~~~---~~~~~~~~  307 (345)
T 3hko_A          250 NE----SYGPKCDAWSAGVLLHLLLMG----------AVPFPGVN----DADTISQVL-NKKLCFENPN---YNVLSPLA  307 (345)
T ss_dssp             SS----CCCTHHHHHHHHHHHHHHHHS----------SCSSCCSS----HHHHHHHHH-HCCCCTTSGG---GGGSCHHH
T ss_pred             CC----CCCcHHHHHHHHHHHHHHHHC----------CCCCCCCC----hHHHHHHHH-hcccccCCcc---cccCCHHH
Confidence            11    567899999999999999999          77776531    122222322 2222111111   12356789


Q ss_pred             HHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        401 TKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       401 ~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+|+.+||+.||.+|||+.++++
T Consensus       308 ~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          308 RDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.1e-44  Score=347.97  Aligned_cols=244  Identities=22%  Similarity=0.364  Sum_probs=194.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|.+  +++.||||++....    ......+.|+..+..++||||+++++++.+.    ..+
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----~~~   84 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP----TDI   84 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----CEE
Confidence            6899999999999999999998  68999999986431    2223445677777779999999999998876    458


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+ +|+|.+++. ...+++.++..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        85 ~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givH~Dlkp~NIll~~~~~~kl~DFG~s  155 (336)
T 3h4j_B           85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH--------KIVHRDLKPENLLLDDNLNVKIADFGLS  155 (336)
T ss_dssp             EEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH--------TCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred             EEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCchhhEEEcCCCCEEEEEeccc
Confidence            9999999 679988875 46799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........     .....||+.|+|||++.+...     .+.++|||||||++|||++|          ..||.+.... 
T Consensus       156 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-----~~~~~DiwslG~il~~ll~g----------~~Pf~~~~~~-  214 (336)
T 3h4j_B          156 NIMTDGNF-----LKTSCGSPNYAAPEVINGKLY-----AGPEVDVWSCGIVLYVMLVG----------RLPFDDEFIP-  214 (336)
T ss_dssp             BTTTTSBT-----TCCCTTSTTTSCGGGSCCSGG-----GCHHHHHHHHHHHHHHHHHS----------SCSSBCSSST-
T ss_pred             eeccCCcc-----cccccCCcCcCCHHHHcCCCC-----CCCccchhHHHHHHHHHHhC----------CCCCCCccHH-
Confidence            76654321     234579999999999986521     24789999999999999999          6666543211 


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                          .+...+  .......|     ...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus       215 ----~~~~~i--~~~~~~~p-----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          215 ----NLFKKV--NSCVYVMP-----DFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             ----TCBCCC--CSSCCCCC-----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             ----HHHHHH--HcCCCCCc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                111111  01111222     3356789999999999999999999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=4.1e-44  Score=344.70  Aligned_cols=256  Identities=25%  Similarity=0.325  Sum_probs=191.9

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.+.++|++.+.||+|+||.||+|.. +|+.||||++.......   .....|+..+..++||||+++++++.+.    .
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~   92 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE----R   92 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS----S
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC----C
Confidence            44568999999999999999999998 68999999986443221   2234566666679999999999998766    3


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++||||+++ +|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        93 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivH~Dikp~NIl~~~~~~~kl~Df  163 (311)
T 3niz_A           93 CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH--------RILHRDLKPQNLLINSDGALKLADF  163 (311)
T ss_dssp             CEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCchHhEEECCCCCEEEccC
Confidence            57999999984 88888754  4599999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||....
T Consensus       164 g~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~ll~g----------~~pf~~~~  224 (311)
T 3niz_A          164 GLARAFGIPVRS----YTHEVVTLWYRAPDVLMGSK-----KYSTSVDIWSIGCIFAEMITG----------KPLFPGVT  224 (311)
T ss_dssp             TTCEETTSCCC-------CCCCCCTTCCHHHHTTCC-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS
T ss_pred             cCceecCCCccc----ccCCcccCCcCCHHHhcCCC-----CCCchHHhHHHHHHHHHHHhC----------CCCCCCCC
Confidence            999876532222    23457899999999987641     466899999999999999999          56665432


Q ss_pred             CCCCChHHHHhhhhhcCCCC-------------------CCCCC---CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRP-------------------VLPNR---WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..    +.+...........                   .....   ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       225 ~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          225 DD----DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TT----THHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hH----HHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            21    11111111000000                   00000   001224567899999999999999999999886

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=2.3e-44  Score=342.03  Aligned_cols=257  Identities=22%  Similarity=0.406  Sum_probs=207.7

Q ss_pred             hhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ..++|++.+.||+|+||.||+|.+.  +..||+|++............|+..+..++||||+++++++.+..    .+++
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~~   86 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYI   86 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CEEE
Confidence            4478999999999999999999984  889999998765544444456666777799999999999987663    4799


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~~l~Dfg~~  158 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--------NFIHRDLAARNCLVGENHLVKVADFGLS  158 (288)
T ss_dssp             EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH--------TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred             EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC--------CccCCCCCcceEEEcCCCCEEEccCccc
Confidence            9999999999999964   4599999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ..........   .....+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||...   
T Consensus       159 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~~g----------~~p~~~~---  216 (288)
T 3kfa_A          159 RLMTGDTYTA---HAGAKFPIKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATYG----------MSPYPGI---  216 (288)
T ss_dssp             GTSCSSSSEE---ETTEEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCSSTTC---
T ss_pred             eeccCCcccc---ccCCccccCcCChhhhccC------CCCchhhHHHHHHHHHHHHhCC----------CCCCCCC---
Confidence            7665432211   2334578899999999876      67789999999999999999 7          6677653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                        ........+.. ......+     ..++..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus       217 --~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          217 --DLSQVYELLEK-DYRMERP-----EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             --CGGGHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHhc-cCCCCCC-----CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence              22233333322 2222222     336678999999999999999999999999999987653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=7.5e-44  Score=346.18  Aligned_cols=258  Identities=22%  Similarity=0.423  Sum_probs=203.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      .++|++.+.||+|+||.||+|.+.         +..||||++.......  .....|+..+..+ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            478999999999999999999863         4679999986543221  2223555555557 899999999998776


Q ss_pred             CCcccEEEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      .    .+++||||+++|+|.+++...                 .+++..++.++.||+.||.|||+.        +|+||
T Consensus       114 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~  181 (334)
T 2pvf_A          114 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHR  181 (334)
T ss_dssp             S----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT--------TEECS
T ss_pred             C----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--------CeeCC
Confidence            3    479999999999999999643                 389999999999999999999999        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......+|+.|+|||++.+.      .++.++||||||+++|||+
T Consensus       182 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ell  253 (334)
T 2pvf_A          182 DLAARNVLVTENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKWMAPEALFDR------VYTHQSDVWSFGVLMWEIF  253 (334)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEECTTTSSEE--CCSCCCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHH
T ss_pred             CCccceEEEcCCCCEEEcccccccccccccccc--ccCCCCcccceeChHHhcCC------CcChHHHHHHHHHHHHHHH
Confidence            999999999999999999999998665432211  12334578899999999765      5668999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      + |          ..||...     ...++...+... ..+..+     ..++..+.+++.+||+.||.+|||+.++++.
T Consensus       254 t~g----------~~p~~~~-----~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          254 TLG----------GSPYPGI-----PVEELFKLLKEG-HRMDKP-----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             TTS----------CCSSTTC-----CHHHHHHHHHHT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCC----------CCCcCcC-----CHHHHHHHHhcC-CCCCCC-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9 7          6677653     233444333322 222222     3366789999999999999999999999999


Q ss_pred             HHHHhhccc
Q psy14889        425 LIKLACADM  433 (443)
Q Consensus       425 L~~l~~~~~  433 (443)
                      |+++.....
T Consensus       313 L~~l~~~~~  321 (334)
T 2pvf_A          313 LDRILTLTT  321 (334)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHhccc
Confidence            999986543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=7.8e-44  Score=339.38  Aligned_cols=253  Identities=23%  Similarity=0.289  Sum_probs=191.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||+||+|..  +++.||||++.......   .....|+..+..++||||+++++++.+.    ..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~   77 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD----KKLT   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET----TEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC----CEEE
Confidence            5799999999999999999998  58899999987543322   2334677777779999999999998776    4689


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+++ +|.+++.  ...+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        78 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~--------~ivH~dikp~Nil~~~~~~~kl~Dfg~~  148 (292)
T 3o0g_A           78 LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR--------NVLHRDLKPQNLLINRNGELKLANFGLA  148 (292)
T ss_dssp             EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence            99999986 6666553  46799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||....   
T Consensus       149 ~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~~----------~~p~~~~~---  206 (292)
T 3o0g_A          149 RAFGIPVRC----YSAEVVTLWYRPPDVLFGAK-----LYSTSIDMWSAGCIFAELANA----------GRPLFPGN---  206 (292)
T ss_dssp             EECCSCCSC----CCSCCSCGGGCCHHHHTTCS-----CCCTHHHHHHHHHHHHHHTTT----------SCCSCCCS---
T ss_pred             eecCCcccc----ccCCccccCCcChHHHcCCC-----CcCchHHHHHHHHHHHHHHHc----------CCCCcCCC---
Confidence            876532222    23457899999999987652     367899999999999999998          44433211   


Q ss_pred             CChHHHHhhhhhcCCC-----------------CCCCC----CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQR-----------------PVLPN----RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~-----------------~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+.+..........                 +..+.    .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       207 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          207 DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            1111112211110000                 00000    0011235678999999999999999999999885

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.2e-44  Score=348.87  Aligned_cols=276  Identities=23%  Similarity=0.308  Sum_probs=203.1

Q ss_pred             ccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|++      +++.||||++....... .....|+..+..++||||+++++++.....  ..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~  100 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR--QS  100 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS--CE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC--ce
Confidence            6899999999999999999985      47889999986554322 223566667777999999999999875443  46


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++||||+++|+|.+++..  ..+++..++.++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dikp~NIl~~~~~~~kl~Dfg  172 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR--------RCVHRDLAARNILVESEAHVKIADFG  172 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred             EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCChhhEEECCCCCEEEcccc
Confidence            8999999999999999964  5699999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++......... .......||..|+|||++.+.      .++.++||||||+++|||++|+.|+...............
T Consensus       173 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~  245 (327)
T 3lxl_A          173 LAKLLPLDKDYY-VVREPGQSPIFWYAPESLSDN------IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER  245 (327)
T ss_dssp             GCEECCTTCSEE-ECSSCCCSCGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC---
T ss_pred             cceecccCCccc-eeeccCCccccccCHHHhccC------CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc
Confidence            998765432211 112344688899999999776      5568999999999999999995443211000000000000


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      .......+...+.. ......+     ..++..+.+|+.+||+.||++|||+.++++.|+++......
T Consensus       246 ~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  307 (327)
T 3lxl_A          246 DVPALSRLLELLEE-GQRLPAP-----PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG  307 (327)
T ss_dssp             -CCHHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred             ccccHHHHHHHhhc-ccCCCCC-----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence            01111222222221 2222222     34667899999999999999999999999999998765443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.5e-44  Score=343.43  Aligned_cols=258  Identities=19%  Similarity=0.323  Sum_probs=195.6

Q ss_pred             hccccccceeeeecCeEEEEEEEC--C-------ceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH--G-------ENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~--~-------~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      .++|.+.+.||+|+||.||+|.+.  +       ..||+|++...... ......|+..+..++||||+++++++.+.. 
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-   85 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-   85 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence            478999999999999999999873  3       46999988654332 223345666777799999999999998764 


Q ss_pred             cccEEEeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc---
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---  279 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~---  279 (443)
                         ..++||||+++|+|.+++...  .+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.   
T Consensus        86 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~  154 (289)
T 4fvq_A           86 ---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN--------TLIHGNVCAKNILLIREEDRKT  154 (289)
T ss_dssp             ---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEEEECCBGGG
T ss_pred             ---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC--------CeECCCcCcceEEEecCCcccc
Confidence               368999999999999999753  399999999999999999999999        9999999999999999887   


Q ss_pred             -----EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcc
Q psy14889        280 -----CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF  354 (443)
Q Consensus       280 -----~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~  354 (443)
                           +||+|||++......        ....||+.|+|||++.+..     .++.++||||||+++|||++|.      
T Consensus       155 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g~------  215 (289)
T 4fvq_A          155 GNPPFIKLSDPGISITVLPK--------DILQERIPWVPPECIENPK-----NLNLATDKWSFGTTLWEICSGG------  215 (289)
T ss_dssp             TBCCEEEECCCCSCTTTSCH--------HHHHHTTTTSCHHHHHCGG-----GCCHHHHHHHHHHHHHHHHTTT------
T ss_pred             cccceeeeccCcccccccCc--------cccCCcCcccCHHHhCCCC-----CCCchhHHHHHHHHHHHHHcCC------
Confidence                 999999998654322        1235788999999998631     5668999999999999999972      


Q ss_pred             cccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       355 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                         ..||...     ..........   .....+..     .+.++.+++.+||+.||++|||+.++++.|+++......
T Consensus       216 ---~~~~~~~-----~~~~~~~~~~---~~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          216 ---DKPLSAL-----DSQRKLQFYE---DRHQLPAP-----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             ---CCTTTTS-----CHHHHHHHHH---TTCCCCCC-----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             ---CCCcccc-----chHHHHHHhh---ccCCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence               3344332     2222222221   12222221     234589999999999999999999999999999886655


Q ss_pred             ccCCC
Q psy14889        435 IHCSD  439 (443)
Q Consensus       435 ~~~~~  439 (443)
                      ...++
T Consensus       280 ~~~~~  284 (289)
T 4fvq_A          280 PRGSH  284 (289)
T ss_dssp             -----
T ss_pred             CCCcc
Confidence            54443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=6.3e-44  Score=338.01  Aligned_cols=256  Identities=23%  Similarity=0.349  Sum_probs=198.9

Q ss_pred             hccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|.+.+.||+|+||.||+|.+.     +..||||++......  ......|+..+..++||||+++++++.+..    
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----   86 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP----   86 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS----
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----
Confidence            378999999999999999999873     235999988654221  222345666666689999999999976542    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        87 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~kl~Df  157 (281)
T 3cc6_A           87 -TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--------NCVHRDIAVRNILVASPECVKLGDF  157 (281)
T ss_dssp             -CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEEEETTEEEECCC
T ss_pred             -CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCccceEEECCCCcEEeCcc
Confidence             4899999999999999964  4599999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |++.........   ......+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||...
T Consensus       158 g~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~llt~g----------~~p~~~~  218 (281)
T 3cc6_A          158 GLSRYIEDEDYY---KASVTRLPIKWMSPESINFR------RFTTASDVWMFAVCMWEILSFG----------KQPFFWL  218 (281)
T ss_dssp             CGGGCC------------CCCCCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTT----------CCTTTTS
T ss_pred             CCCccccccccc---ccccCCCCcceeCchhhccC------CCCchhccHHHHHHHHHHHhCC----------CCCcccC
Confidence            999766543211   12334578899999999765      66789999999999999998 8          6677543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      .     .......+... .....+     ..++..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus       219 ~-----~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          219 E-----NKDVIGVLEKG-DRLPKP-----DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             C-----GGGHHHHHHHT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             C-----hHHHHHHHhcC-CCCCCC-----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence            2     12222322222 222222     2356789999999999999999999999999999887543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.9e-43  Score=337.62  Aligned_cols=258  Identities=30%  Similarity=0.415  Sum_probs=197.2

Q ss_pred             cccceeeeecCeEEEEEEECCceeEEEEeeccC-----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        139 SLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD-----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      ...+.||+|+||.||+|.++++.||||++....     ........|+..+..++||||+++++++.+..    ..++||
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~  109 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD----DLCLVY  109 (307)
T ss_dssp             TTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEEEE
T ss_pred             ccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCC----ceEEEE
Confidence            344899999999999999999999999886432     11223345666666799999999999987764    469999


Q ss_pred             cccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        214 HYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       214 e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||+++|+|.+++..    ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--------HHIHRDIKSANILLDEAFTAKISDFGLAR  181 (307)
T ss_dssp             ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CeecCCCCHHHEEEcCCCcEEEeeccccc
Confidence            99999999999863    4599999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .........  ......||+.|+|||.+.+       .++.++||||||+++|||++|          ..||........
T Consensus       182 ~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-------~~~~~~Dv~slG~il~~l~~g----------~~p~~~~~~~~~  242 (307)
T 2nru_A          182 ASEKFAQTV--MTSRIVGTTAYMAPEALRG-------EITPKSDIYSFGVVLLEIITG----------LPAVDEHREPQL  242 (307)
T ss_dssp             ECCSCSSCE--ECSSCCSCGGGCCHHHHTT-------EECTHHHHHHHHHHHHHHHHC----------CCSBCTTBSSSB
T ss_pred             ccccccccc--cccccCCCcCcCChHHhcC-------CCCccchhHHHHHHHHHHHHC----------CCCcccCcchHH
Confidence            665422211  1233578999999998865       345799999999999999999          556654322111


Q ss_pred             ChHHHHhhhhhcC------CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        370 SFDDMRKVICIDQ------QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       370 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      . ..+........      ....++.  .....+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       243 ~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          243 L-LDIKEEIEDEEKTIEDYIDKKMND--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             T-THHHHHHHTTSCCHHHHSCSSCSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             H-HHHHHHhhhhhhhhhhhccccccc--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            1 11111111000      0011111  134567889999999999999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.1e-43  Score=339.25  Aligned_cols=261  Identities=23%  Similarity=0.360  Sum_probs=200.8

Q ss_pred             ccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+|++.+.||+|+||.||+|.+.     ...||+|.+......  ......|+..+..++||||+++++++.....   .
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~  101 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---S  101 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---C
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC---c
Confidence            57899999999999999999872     225899987653322  1223456667777999999999998765443   4


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~kl~Dfg  173 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK--------KFVHRDLAARNCMLDEKFTVKVADFG  173 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred             eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCchheEEECCCCCEEECccc
Confidence            6899999999999999964  4589999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.................||+.|+|||.+.+.      .++.++||||||+++|||++|.         ..||.....
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~~---------~~~~~~~~~  238 (298)
T 3f66_A          174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ------KFTTKSDVWSFGVLLWELMTRG---------APPYPDVNT  238 (298)
T ss_dssp             GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS---------CCSSTTSCT
T ss_pred             ccccccccchhccccccCCCCCccccChHHhcCC------CCChHHHHHHHHHHHHHHHhCC---------CCCCccCCH
Confidence            9987654433222233445688899999999776      6778999999999999999962         445544321


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                           ......+. .......+     ..++..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus       239 -----~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          239 -----FDITVYLL-QGRRLLQP-----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             -----TTHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             -----HHHHHHHh-cCCCCCCC-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence                 11112111 12222222     2356789999999999999999999999999999987643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=5.4e-44  Score=343.82  Aligned_cols=244  Identities=23%  Similarity=0.302  Sum_probs=186.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch---HHHHHHHHHHh-ccCCCceeeeeeccccCCc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW---SRETEIYSTVL-LRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~---~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~  205 (443)
                      ..+.++|++.+.||+|+||+||+|.+  +|+.||||++........   ....|+..+.. .+||||+++++++.+.   
T Consensus        53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~---  129 (311)
T 3p1a_A           53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG---  129 (311)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred             chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC---
Confidence            44557899999999999999999998  589999998755332221   22233333333 4899999999998765   


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                       ..+++||||+ +|+|.+++..  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+
T Consensus       130 -~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dikp~NIll~~~~~~kl~  199 (311)
T 3p1a_A          130 -GILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ--------GLVHLDVKPANIFLGPRGRCKLG  199 (311)
T ss_dssp             -TEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECGGGCEEEC
T ss_pred             -CEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCCCCHHHEEECCCCCEEEc
Confidence             4689999999 5699998864  4699999999999999999999998        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++........     .....||+.|+|||++.+       .++.++|||||||++|||++|          ..|+..
T Consensus       200 DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g----------~~~~~~  257 (311)
T 3p1a_A          200 DFGLLVELGTAGA-----GEVQEGDPRYMAPELLQG-------SYGTAADVFSLGLTILEVACN----------MELPHG  257 (311)
T ss_dssp             CCTTCEECC-----------CCCCCGGGCCGGGGGT-------CCSTHHHHHHHHHHHHHHHHT----------CCCCSS
T ss_pred             cceeeeecccCCC-----CcccCCCccccCHhHhcC-------CCCchhhHHHHHHHHHHHHhC----------CCCCCC
Confidence            9999976654322     233469999999998875       456899999999999999999          333322


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .       ....... .....+..     ....+.++.+++.+||+.||++|||+.|+++
T Consensus       258 ~-------~~~~~~~-~~~~~~~~-----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          258 G-------EGWQQLR-QGYLPPEF-----TAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             H-------HHHHHHT-TTCCCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             c-------cHHHHHh-ccCCCccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            1       1111111 11111111     1235678999999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.8e-44  Score=345.70  Aligned_cols=267  Identities=21%  Similarity=0.305  Sum_probs=197.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.++|++.+.||+|+||.||+|++  +++.||||++.......    .....|+..+..++||||+++++++........
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            457899999999999999999997  68899999986543222    122456666666899999999999877655445


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..++||||+++|+|.++++. ..+++.++..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~kl~Dfg  161 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN--------GIIHRDVKPANIMISATNAVKVMDFG  161 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred             ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence            67999999999999999964 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.+....... .......||+.|+|||++.+.      .++.++||||||+++|||++|          ..||...  
T Consensus       162 ~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~~l~~ll~g----------~~pf~~~--  222 (311)
T 3ork_A          162 IARAIADSGNSV-TQTAAVIGTAQYLSPEQARGD------SVDARSDVYSLGCVLYEVLTG----------EPPFTGD--  222 (311)
T ss_dssp             CC-------------------CCTTCCHHHHHTC------CCCHHHHHHHHHHHHHHHHHS----------SCSCCCS--
T ss_pred             Cccccccccccc-ccccccCcCcccCCHHHhcCC------CCCchHhHHHHHHHHHHHHhC----------CCCCCCC--
Confidence            997765432221 112345789999999999876      677899999999999999999          7777653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-HHHHHHHHHHHhhccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-ALRVKKTLIKLACADM  433 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~L~~l~~~~~  433 (443)
                         ...............+   .......++.++.+++.+||+.||++||+ ++++...+.++....+
T Consensus       223 ---~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  284 (311)
T 3ork_A          223 ---SPVSVAYQHVREDPIP---PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP  284 (311)
T ss_dssp             ---SHHHHHHHHHHCCCCC---HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCC
T ss_pred             ---ChHHHHHHHhcCCCCC---cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCC
Confidence               1222222111111111   10111235678999999999999999995 5556677777665443

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.3e-44  Score=345.82  Aligned_cols=255  Identities=23%  Similarity=0.433  Sum_probs=195.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCcee----EEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENV----AVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~v----AvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|++.+.||+|+||.||+|.+  +++.|    |+|.+.....  .......|+..+..++||||+++++++....    
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----   90 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST----   90 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS----
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC----
Confidence            6899999999999999999998  45554    6666543322  2233345666777799999999999987653    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++|+||+.+|+|.+++..  ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dikp~NIl~~~~~~~kL~Df  161 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--------RLVHRDLAARNVLVKTPQHVKITDF  161 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred             -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC--------CCcCCCCCHHHEEEcCCCCEEEccC
Confidence             5899999999999999964  5699999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+++.........  ......||+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||...
T Consensus       162 G~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~~g----------~~p~~~~  223 (327)
T 3lzb_A          162 GLAKLLGAEEKEY--HAEGGKVPIKWMALESILHR------IYTHQSDVWSYGVTVWELMTFG----------SKPYDGI  223 (327)
T ss_dssp             TC------------------CCCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTC
T ss_pred             cceeEccCccccc--cccCCCccccccCHHHHcCC------CCChHHHHHHHHHHHHHHHHCC----------CCCCCCC
Confidence            9998765433221  12334578899999999876      67789999999999999999 8          6777654


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ....+...+... .....+     ..++.++.+++.+||+.||.+|||+.|+++.|+++....
T Consensus       224 -----~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          224 -----PASEISSILEKG-ERLPQP-----PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             -----CGGGHHHHHHTT-CCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             -----CHHHHHHHHHcC-CCCCCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence                 223333333322 222222     336678999999999999999999999999999998654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.4e-43  Score=345.73  Aligned_cols=244  Identities=23%  Similarity=0.306  Sum_probs=190.5

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|+.  +++.||+|++.......    .....|+..+..+ +||||+++++++.+.    ..
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----~~   84 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----SR   84 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC----CE
Confidence            6899999999999999999998  58899999987543211    1122344444445 899999999998776    46


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        85 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~g~~kL~DFG~  156 (345)
T 3a8x_A           85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYRDLKLDNVLLDSEGHIKLTDYGM  156 (345)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCHHHEEECCCCCEEEEeccc
Confidence            8999999999999999965 6799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||......
T Consensus       157 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~pf~~~~~~  216 (345)
T 3a8x_A          157 CKEGLRPGD----TTSTFCGTPNYIAPEILRGE------DYGFSVDWWALGVLMFEMMAG----------RSPFDIVGSS  216 (345)
T ss_dssp             CBCSCCTTC----CBCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTTTC-
T ss_pred             cccccCCCC----cccccCCCccccCccccCCC------CCChHHhHHHHHHHHHHHHhC----------CCCcCCcccc
Confidence            975432211    12445899999999999876      677899999999999999999          5566432111


Q ss_pred             ----CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        368 ----DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       368 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                          ......+...+..  ....+|     ...+.++.+|+.+||+.||++||++
T Consensus       217 ~~~~~~~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          217 DNPDQNTEDYLFQVILE--KQIRIP-----RSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ------CHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cccccccHHHHHHHHHc--CCCCCC-----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                1122233333322  223333     2356789999999999999999995

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.3e-44  Score=360.08  Aligned_cols=255  Identities=22%  Similarity=0.274  Sum_probs=197.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ..++|++.+.||+|+||+||+|++  +++.||||++....      ......|.+++  ..++||||+++++++.+.   
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il--~~~~hp~Iv~l~~~~~~~---  146 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VNGDSKWITTLHYAFQDD---  146 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHH--HHSCTTTBCCEEEEEECS---
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHH--HhCCCCCEEEEEEEEeeC---
Confidence            347899999999999999999998  47899999986421      12234455444  458999999999999876   


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                       ..+++||||+++|+|.+++.+  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+
T Consensus       147 -~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~--------giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          147 -NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL--------HYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             -SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEEC
T ss_pred             -CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEecccCHHHeeEcCCCCEEEc
Confidence             458999999999999999975  6799999999999999999999998        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+|+.........   ....+||+.|+|||++...... ...++.++|||||||++|||++|          ..||..
T Consensus       218 DFGla~~~~~~~~~~---~~~~~GT~~Y~APE~l~~~~~~-~~~~~~~~DvwSlGvil~elltG----------~~Pf~~  283 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQ---SSVAVGTPDYISPEILQAMEGG-KGRYGPECDWWSLGVCMYEMLYG----------ETPFYA  283 (437)
T ss_dssp             CCTTCEECCTTSCEE---CCSCCSCGGGCCHHHHHHHHTS-CCEECTHHHHHHHHHHHHHHHHS----------SCTTCC
T ss_pred             chhhhhhcccCCCcc---cccccCCcCeeChHHHhhcccC-CCCCCCcCeeHHHHHHHHHHHhC----------CCCCCC
Confidence            999997665432221   2345799999999998731100 01567899999999999999999          778765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC--CCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV--RLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~  423 (443)
                      .     ...+....+........+|..+  ...+.++.+||++||..+|++  ||+++|+++
T Consensus       284 ~-----~~~~~~~~i~~~~~~~~~p~~~--~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          284 E-----SLVETYGKIMNHKERFQFPTQV--TDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             S-----SHHHHHHHHHTHHHHCCCCSSC--CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             C-----ChhHHHHhhhhccccccCCccc--ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            3     2223322222111122333221  235678999999999998888  999999876

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.4e-43  Score=343.36  Aligned_cols=245  Identities=25%  Similarity=0.339  Sum_probs=189.2

Q ss_pred             hccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCc-----cchHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDE-----ASWSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~-----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||.||+++.     +|+.||+|++.....     .......|+..+..++||||+++++++...  
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--   93 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG--   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence            47899999999999999999987     578999999865321     112223455556669999999999998776  


Q ss_pred             cccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                        ..+++||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+
T Consensus        94 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~ivH~Dlkp~Nill~~~~~~kl~  163 (327)
T 3a62_A           94 --GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK--------GIIYRDLKPENIMLNHQGHVKLT  163 (327)
T ss_dssp             --SCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCTTTEEECTTSCEEEC
T ss_pred             --CEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEcccCCHHHeEECCCCcEEEE
Confidence              357999999999999999964 5789999999999999999999999        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+++........    .....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||..
T Consensus       164 Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~pf~~  223 (327)
T 3a62_A          164 DFGLCKESIHDGTV----THTFCGTIEYMAPEILMRS------GHNRAVDWWSLGALMYDMLTG----------APPFTG  223 (327)
T ss_dssp             CCSCC--------------CTTSSCCTTSCHHHHTTS------CCCTHHHHHHHHHHHHHHHHS----------SCSCCC
T ss_pred             eCCcccccccCCcc----ccccCCCcCccCHhhCcCC------CCCCcccchhHHHHHHHHHHC----------CCCCCC
Confidence            99998754332211    2345799999999999776      667899999999999999999          777765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .     ........+..  ....++     ...+.++.+++.+||+.||++||     ++.|+++
T Consensus       224 ~-----~~~~~~~~i~~--~~~~~p-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          224 E-----NRKKTIDKILK--CKLNLP-----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             S-----SHHHHHHHHHH--TCCCCC-----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             C-----CHHHHHHHHHh--CCCCCC-----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            3     22222222221  122233     23567899999999999999999     7778765

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2e-43  Score=348.71  Aligned_cols=249  Identities=22%  Similarity=0.307  Sum_probs=197.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||++..  +++.||+|++....    ........|+..+..++||||+++++++.+.    ..+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----~~~   90 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE----EDM   90 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----CEE
Confidence            6899999999999999999998  57899999986432    1112233566666669999999999999876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+.+|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~g~vkL~DFG~a  162 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ--------RIIHRDMKPDNILLDEHGHVHITDFNIA  162 (384)
T ss_dssp             EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCcHHHeEECCCCCEEEecccee
Confidence            999999999999999975 4799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+.....     .....||+.|+|||++......   .++.++|||||||++|||++|          ..||.....  
T Consensus       163 ~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~il~elltG----------~~Pf~~~~~--  222 (384)
T 4fr4_A          163 AMLPRETQ-----ITTMAGTKPYMAPEMFSSRKGA---GYSFAVDWWSLGVTAYELLRG----------RRPYHIRSS--  222 (384)
T ss_dssp             EECCTTCC-----BCCCCSCGGGCCGGGTCCCSSC---CBCTTHHHHHHHHHHHHHHHS----------SCSSCCCTT--
T ss_pred             eeccCCCc-----eeccCCCccccCCeeeccCCCC---CCCccceeechHHHHHHHHhC----------CCCCCCCCC--
Confidence            87653321     2446899999999999753211   567899999999999999999          677764321  


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-HHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-ALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~  423 (443)
                      .....+...+..  .....|     ...+..+.+||.+||+.||.+||+ +.++++
T Consensus       223 ~~~~~~~~~~~~--~~~~~p-----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          223 TSSKEIVHTFET--TVVTYP-----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             SCHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ccHHHHHHHHhh--cccCCC-----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            122333333222  222233     235678999999999999999998 666654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.1e-43  Score=347.15  Aligned_cols=241  Identities=20%  Similarity=0.281  Sum_probs=197.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||||++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~  116 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN----SNL  116 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC----CEE
Confidence            6899999999999999999998  589999999865321    112233456666669999999999998876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus       117 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~g~~kL~DFg~a  188 (350)
T 1rdq_E          117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--------DLIYRDLKPENLLIDQQGYIQVTDFGFA  188 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCccceEEECCCCCEEEcccccc
Confidence            999999999999999975 6799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.....       .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...    
T Consensus       189 ~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~Pf~~~----  241 (350)
T 1rdq_E          189 KRVKGR-------TWTLCGTPEALAPEIILSK------GYNKAVDWWALGVLIYEMAAG----------YPPFFAD----  241 (350)
T ss_dssp             EECSSC-------BCCCEECGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             eeccCC-------cccccCCccccCHHHhcCC------CCCCcCCEecccHhHhHHhhC----------CCCCCCC----
Confidence            866432       1345799999999999876      677899999999999999999          7777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                       ....+...+...  ...+|     ...+.++.+++.+||+.||++||+     +.+|++
T Consensus       242 -~~~~~~~~i~~~--~~~~p-----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          242 -QPIQIYEKIVSG--KVRFP-----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CHHHHHHHHHcC--CCCCC-----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence             223333333222  22333     235678999999999999999998     788765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-44  Score=354.81  Aligned_cols=261  Identities=23%  Similarity=0.381  Sum_probs=191.4

Q ss_pred             ccccccceeeeecCeEEEEEEEC---C--ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---G--ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---~--~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ..|.+.+.||+|+||.||+|.+.   +  ..||||.+......  ......|+..+..++||||+++++++.....   .
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~  165 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---S  165 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS---C
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC---C
Confidence            35788899999999999999872   2  36899987643322  2233456666667999999999998765432   4


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~~~~kL~DFG  237 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK--------KFVHRDLAARNCMLDEKFTVKVADFG  237 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred             eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CEecCccchheEEECCCCCEEEeecc
Confidence            6899999999999999965  4589999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.................+|+.|+|||.+.+.      .++.++||||||+++|||+||.         ..||.....
T Consensus       238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlG~il~ellt~~---------~~p~~~~~~  302 (373)
T 3c1x_A          238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ------KFTTKSDVWSFGVLLWELMTRG---------APPYPDVNT  302 (373)
T ss_dssp             --------------------CCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS---------CCSCTTSCS
T ss_pred             ccccccccccccccccCCCCCcccccChHHhcCC------CCCcHHHHHHHHHHHHHHHhCc---------CCCCCCCCH
Confidence            9986644322211122344678899999999876      6778999999999999999952         456655321


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      .     +....+. ...++..+     ..++..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus       303 ~-----~~~~~~~-~~~~~~~p-----~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          303 F-----DITVYLL-QGRRLLQP-----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             S-----CHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             H-----HHHHHHH-cCCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            1     1112221 12222222     3366789999999999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=9.1e-44  Score=337.87  Aligned_cols=249  Identities=20%  Similarity=0.318  Sum_probs=193.6

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..+.++|.+.+.||+|+||.||++..  ++..||+|++......  ....+.|+..+..++||||+++++++.+.    .
T Consensus        18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~   93 (285)
T 3is5_A           18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY----H   93 (285)
T ss_dssp             SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----S
T ss_pred             CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC----C
Confidence            44567899999999999999999998  5889999998654322  23345677777779999999999998765    4


Q ss_pred             EEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCc
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGT  279 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~  279 (443)
                      ..++||||+++|+|.+++..     ..+++..+..++.|++.||+|||+.        +|+||||||+|||+   +.++.
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~dikp~NIl~~~~~~~~~  165 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ--------HVVHKDLKPENILFQDTSPHSP  165 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEESSSSTTCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CEEECCCCHHHEEEecCCCCCC
Confidence            58999999999999998843     5699999999999999999999999        99999999999999   45578


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||++........     .....||+.|+|||++.+       .++.++||||||+++|||++|          ..
T Consensus       166 ~kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~il~~ll~g----------~~  223 (285)
T 3is5_A          166 IKIIDFGLAELFKSDEH-----STNAAGTALYMAPEVFKR-------DVTFKCDIWSAGVVMYFLLTG----------CL  223 (285)
T ss_dssp             EEECCCCCCCC---------------CTTGGGCCHHHHTT-------CCCHHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EEEEeeecceecCCccc-----CcCcccccCcCChHHhcc-------CCCcccCeehHHHHHHHHHhC----------CC
Confidence            99999999976554221     234578999999999864       456899999999999999999          67


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ||.+.     ...................    ....++++.+|+.+||+.||++|||+.|+++
T Consensus       224 pf~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          224 PFTGT-----SLEEVQQKATYKEPNYAVE----CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             SSCCS-----SHHHHHHHHHHCCCCCCC------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CCCCC-----CHHHHHhhhccCCcccccc----cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            77653     2333333332222211111    1224578999999999999999999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.2e-43  Score=346.96  Aligned_cols=244  Identities=23%  Similarity=0.314  Sum_probs=194.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||||++....    ........|...+..+ +||||+++++++.+.    ..
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----~~   95 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----DR   95 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS----SE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC----CE
Confidence            6899999999999999999998  47889999986532    1112223344444434 899999999998776    46


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        96 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~g~vkL~DFG~  167 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK--------GIIYRDLKLDNVMLDSEGHIKIADFGM  167 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence            8999999999999999975 6799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.......    .....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       168 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~G----------~~Pf~~~---  224 (353)
T 2i0e_A          168 CKENIWDGV----TTKTFCGTPDYIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAG----------QAPFEGE---  224 (353)
T ss_dssp             CBCCCCTTC----CBCCCCSCGGGCCHHHHTTC------CBSTHHHHHHHHHHHHHHHHS----------SCSSCCS---
T ss_pred             ccccccCCc----ccccccCCccccChhhhcCC------CcCCcccccchHHHHHHHHcC----------CCCCCCC---
Confidence            975432211    12456899999999999876      677899999999999999999          7777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                        ....+...+...  ...+|     ...+.++.+|+.+||+.||++||+     +.++++
T Consensus       225 --~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          225 --DEDELFQSIMEH--NVAYP-----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             --SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             --CHHHHHHHHHhC--CCCCC-----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence              233333333222  22333     235678999999999999999995     567664

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.4e-43  Score=337.72  Aligned_cols=266  Identities=19%  Similarity=0.254  Sum_probs=199.8

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.++|++.+.||+|+||.||+|..  +++.||||++..... .....|.++  +..++|+|++..++.+....   ...+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~--l~~l~~~~~i~~~~~~~~~~---~~~~   81 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI--YKMMQGGVGIPTIRWCGAEG---DYNV   81 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHH--HHHHTTSTTCCCEEEEEEET---TEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHH--HHHhcCCCCCCeeeeecCCC---CceE
Confidence            447899999999999999999996  688999998654432 334444444  44488998888877765443   4579


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl~Df  285 (443)
                      +||||+ +|+|.+++.  ...+++..+..++.||+.||.|||+.        +|+||||||+|||+   +.++.+||+||
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIl~~~~~~~~~~kL~Df  152 (296)
T 4hgt_A           82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK--------NFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred             EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence            999999 899999997  46799999999999999999999999        99999999999999   78899999999


Q ss_pred             CCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        286 GLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       286 Gla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |+++..........   .......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||.
T Consensus       153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~  216 (296)
T 4hgt_A          153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI------EQSRRDDLESLGYVLMYFNLG----------SLPWQ  216 (296)
T ss_dssp             TTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCTTS
T ss_pred             ccceeccCcccCccCCCCcccccCCCccccchHHhcCC------CCCchhHHHHHHHHHHHHhcC----------CCCCc
Confidence            99987665432211   122345799999999999876      677899999999999999999          66776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ........ ..+..........+ .+  .....++.++.+++.+||+.||++|||+.++++.|+++.+...
T Consensus       217 ~~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          217 GLKAATKR-QKYERISEKKMSTP-IE--VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             SCCCSSSS-SHHHHHHHHHHHSC-HH--HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ccchhhhh-hhhhhhhcccccch-hh--hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            54322211 11111111100000 00  0012245789999999999999999999999999999987654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-43  Score=335.93  Aligned_cols=260  Identities=21%  Similarity=0.350  Sum_probs=202.6

Q ss_pred             cccccceeeeecCeEEEEEEE--CCc---eeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGE---NVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~---~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .|...+.||+|+||.||+|.+  ++.   .||+|++.......  .....|+..+..++||||+++++++.+...   ..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~   98 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG---LP   98 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---CC
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC---Cc
Confidence            567779999999999999987  332   69999886533322  223456666777999999999999876643   24


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+.+|+|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dikp~Nili~~~~~~kl~Dfg~  170 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ--------KFVHRDLAARNCMLDESFTVKVADFGL  170 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred             EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCcceEEEcCCCcEEeCcCCC
Confidence            899999999999999975  5689999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++.................+|+.|+|||.+.+.      .++.++||||||+++|||++|.         ..||...   
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~---------~~~~~~~---  232 (298)
T 3pls_A          171 ARDILDREYYSVQQHRHARLPVKWTALESLQTY------RFTTKSDVWSFGVLLWELLTRG---------APPYRHI---  232 (298)
T ss_dssp             SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTC------CCCHHHHHHHHHHHHHHHHHTS---------CCTTTTS---
T ss_pred             cccccCCcccccccCcCCCCCccccChhhhccC------CCChhhchhhHHHHHHHHhhCC---------CCCCccC---
Confidence            986654332222233445788999999999876      6778999999999999999972         2333332   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                        ........+... .....+     ..++..+.+++.+||+.||.+|||+.++++.|+++.....
T Consensus       233 --~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          233 --DPFDLTHFLAQG-RRLPQP-----EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             --CGGGHHHHHHTT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             --CHHHHHHHhhcC-CCCCCC-----ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence              222333333222 222222     3356789999999999999999999999999999987654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=352.37  Aligned_cols=272  Identities=17%  Similarity=0.181  Sum_probs=199.3

Q ss_pred             hccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccCccc------------hHHHHHHHHHHhccCCCceeeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRDEAS------------WSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~~~~------------~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      .++|.+.+.||+|+||.||+|.+     ++..||||+........            .....|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            46899999999999999999998     45789999886543211            11124455566689999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                      ++..........++||||+ +++|.+++.. ..+++.+++.++.||+.||+|||+.        +|+||||||+|||++.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN--------EYVHGDIKAANLLLGY  186 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEES
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeCCCcCHHHEEEcc
Confidence            9887433336789999999 8999999975 4799999999999999999999999        9999999999999998


Q ss_pred             CC--cEEEEecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        277 NG--TCVIADFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       277 ~~--~~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      ++  .+||+|||+++.+........   .......||+.|+|||++.+.      .++.++|||||||++|||++|    
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~g----  256 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV------ALSRRSDVEILGYCMLRWLCG----  256 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC------CCCHHHHHHHHHHHHHHHHHS----
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC------CCCchhhHHHHHHHHHHHHhC----
Confidence            87  999999999987654322211   111345799999999999876      677899999999999999999    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCC----CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR----WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                            ..||.....   ...........  ....++..    .....++.++.+++.+||+.||++|||+.+|++.|++
T Consensus       257 ------~~pf~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  325 (345)
T 2v62_A          257 ------KLPWEQNLK---DPVAVQTAKTN--LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP  325 (345)
T ss_dssp             ------SCTTGGGTT---CHHHHHHHHHH--HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred             ------CCCcccccc---ccHHHHHHHHh--hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence                  677754321   11111111100  00111100    0011356789999999999999999999999999998


Q ss_pred             Hhhcccccc
Q psy14889        428 LACADMYIH  436 (443)
Q Consensus       428 l~~~~~~~~  436 (443)
                      +.......+
T Consensus       326 ~~~~~~~~d  334 (345)
T 2v62_A          326 HGIPLGPLD  334 (345)
T ss_dssp             TCCCCCCCC
T ss_pred             cCCcccCCC
Confidence            776544444

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=9.2e-44  Score=352.89  Aligned_cols=262  Identities=21%  Similarity=0.342  Sum_probs=193.2

Q ss_pred             ccccccceeeee--cCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKG--RYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G--~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|  +||.||+|++  +|+.||||++.......   .....|+..+..++||||+++++++.+.    ..
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~  100 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD----NE  100 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC----CE
Confidence            689999999999  9999999998  58999999987543222   2224566667779999999999999876    46


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +++||||+++|+|.+++..   ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~df  172 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM--------GYVHRSVKASHILISVDGKVYLSGL  172 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCG
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEcCCCCEEEccc
Confidence            8999999999999999964   5699999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCc---CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        286 GLAVSYSQLSNK---MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       286 Gla~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |++.........   .........||+.|+|||++.+...    .++.++|||||||++|||++|          ..||.
T Consensus       173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~DiwslG~il~el~~g----------~~pf~  238 (389)
T 3gni_B          173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ----GYDAKSDIYSVGITACELANG----------HVPFK  238 (389)
T ss_dssp             GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSS----CBCTHHHHHHHHHHHHHHHHS----------SCTTT
T ss_pred             ccceeeccccccccccccccccccccccccCHHHHhccCC----CCCcHhHHHHHHHHHHHHHHC----------CCCCC
Confidence            998655332211   1112233478999999999986311    567899999999999999999          55554


Q ss_pred             CCCCCCCChHHHHhhhh-------------------------------hcCCC---CCCCCCCCCchhHHHHHHHHHHHh
Q psy14889        363 DLVPMDPSFDDMRKVIC-------------------------------IDQQR---PVLPNRWVSDSTLNAMTKVMKECW  408 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~-------------------------------~~~~~---~~~~~~~~~~~~~~~l~~li~~cl  408 (443)
                      +................                               .....   ...+........+..+.+|+.+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  318 (389)
T 3gni_B          239 DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL  318 (389)
T ss_dssp             TCCSTTHHHHC--------------------------------------------------------CCHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHh
Confidence            42211100000000000                               00000   000000012335677999999999


Q ss_pred             cCCcCCCCcHHHHHH
Q psy14889        409 HQNANVRLSALRVKK  423 (443)
Q Consensus       409 ~~dP~~Rps~~evl~  423 (443)
                      +.||++|||+.|+++
T Consensus       319 ~~dP~~Rpta~ell~  333 (389)
T 3gni_B          319 QRNPDARPSASTLLN  333 (389)
T ss_dssp             CSCTTTSCCHHHHTT
T ss_pred             hcCcccCCCHHHHhc
Confidence            999999999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.1e-44  Score=348.87  Aligned_cols=251  Identities=21%  Similarity=0.306  Sum_probs=173.9

Q ss_pred             cccccc---ceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLS---ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~---~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.   +.||+|+||.||+|.+  +++.||||++..........  |+..+..+. ||||+++++++.+.    ...
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--e~~~l~~l~~h~niv~~~~~~~~~----~~~   81 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK--EITALKLCEGHPNIVKLHEVFHDQ----LHT   81 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHH--HHHHHHHTTTCTTBCCEEEEEECS----SEE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHH--HHHHHHHhcCCCCeeEEEEEEEcC----CEE
Confidence            345543   7899999999999998  58899999987654444444  444444466 99999999998766    457


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC---cEEEEec
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADF  285 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~---~~kl~Df  285 (443)
                      ++||||+++|+|.+++.. ..+++.++..++.||+.||+|||+.        +|+||||||+|||++.++   .+||+||
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~~kl~Df  153 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV--------GVVHRDLKPENLLFTDENDNLEIKIIDF  153 (325)
T ss_dssp             EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEEEC----CEEEECCC
T ss_pred             EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCHHHEEEecCCCcccEEEecc
Confidence            999999999999999965 5699999999999999999999999        999999999999998766   8999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....
T Consensus       154 g~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g----------~~pf~~~~  213 (325)
T 3kn6_A          154 GFARLKPPDNQP----LKTPCFTLHYAAPELLNQN------GYDESCDLWSLGVILYTMLSG----------QVPFQSHD  213 (325)
T ss_dssp             TTCEECCC--------------------------C------CCCHHHHHHHHHHHHHHHHHS----------SCTTC---
T ss_pred             ccceecCCCCCc----ccccCCCcCccCHHHhcCC------CCCCccchHHHHHHHHHHHhC----------CCCCCCCc
Confidence            999765443221    2345789999999999776      677899999999999999999          66665432


Q ss_pred             CCC--CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMD--PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...  ....++...+..  .....+.. ....+++++.+|+.+||+.||++|||+.|+++
T Consensus       214 ~~~~~~~~~~~~~~i~~--~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          214 RSLTCTSAVEIMKKIKK--GDFSFEGE-AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             ----CCCHHHHHHHHTT--TCCCCCSH-HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             cccccccHHHHHHHHHc--CCCCCCcc-cccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            211  112222222221  11212110 00125678999999999999999999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=5.4e-44  Score=346.81  Aligned_cols=260  Identities=23%  Similarity=0.400  Sum_probs=204.3

Q ss_pred             hhccccccceeeeecCeEEEEEEEC--C-----ceeEEEEeeccCcc--chHHHHHHHHHHhc-cCCCceeeeeeccccC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH--G-----ENVAVKIFFSRDEA--SWSRETEIYSTVLL-RHENILGYIGSDMTSR  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~-----~~vAvK~~~~~~~~--~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~  203 (443)
                      ..++|.+.+.||+|+||.||+|.+.  +     ..||+|.+......  ......|+..+..+ +||||+++++++....
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            3478999999999999999999983  2     37999998654322  22234566666668 8999999999987764


Q ss_pred             CcccEEEeeecccCcccHHHHhcc---------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR---------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIK  268 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~---------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk  268 (443)
                          .+++||||+++|+|.+++..               ..+++..++.++.||+.||.|||+.        +|+|||||
T Consensus       124 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dlk  191 (333)
T 2i1m_A          124 ----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK--------NCIHRDVA  191 (333)
T ss_dssp             ----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCS
T ss_pred             ----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC--------CcccCCcc
Confidence                46999999999999999853               2479999999999999999999999        99999999


Q ss_pred             CCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-c
Q psy14889        269 SKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-R  347 (443)
Q Consensus       269 ~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g  347 (443)
                      |+|||++.++.+||+|||+++.........  ......||+.|+|||.+.+.      .++.++||||||+++|||+| |
T Consensus       192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~t~g  263 (333)
T 2i1m_A          192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPVKWMAPESIFDC------VYTVQSDVWSYGILLWEIFSLG  263 (333)
T ss_dssp             GGGCEEEGGGEEEBCCCGGGCCGGGCTTSE--ECSSCEECGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHTTTS
T ss_pred             cceEEECCCCeEEECcccccccccccccee--ecCCCCCCccccCHHHhccC------CCChHHHHHHHHHHHHHHHcCC
Confidence            999999999999999999998665432211  12334678899999999876      67789999999999999998 6


Q ss_pred             ccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       348 ~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                                ..||.+...    .......... ...+..+     ..++..+.+++.+||+.||.+|||+.++++.|++
T Consensus       264 ----------~~p~~~~~~----~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          264 ----------LNPYPGILV----NSKFYKLVKD-GYQMAQP-----AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             ----------CCSSTTCCS----SHHHHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----------CCCCcccch----hHHHHHHHhc-CCCCCCC-----CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence                      667765421    1233333322 2222222     2345789999999999999999999999999999


Q ss_pred             Hhhccc
Q psy14889        428 LACADM  433 (443)
Q Consensus       428 l~~~~~  433 (443)
                      +.....
T Consensus       324 ~~~~~~  329 (333)
T 2i1m_A          324 QAQEDR  329 (333)
T ss_dssp             HHHHHH
T ss_pred             HHHhhh
Confidence            887653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-43  Score=336.16  Aligned_cols=258  Identities=19%  Similarity=0.310  Sum_probs=203.8

Q ss_pred             ccccccc-eeeeecCeEEEEEEE----CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSE-CIGKGRYGEVWRGVW----HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~-~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|.+.+ .||+|+||.||+|.+    ++..||||++......  ......|+..+..++||||+++++++...     .
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~   83 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-----A   83 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-----S
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC-----C
Confidence            5677776 999999999999986    4678999998764322  22234566666679999999999998432     3


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nili~~~~~~kl~Dfg  155 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK--------NFVHRDLAARNVLLVNRHYAKISDFG  155 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC--------CEeeCCCchheEEEcCCCCEEECccc
Confidence            7999999999999999953  5699999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      ++.......... .......||+.|+|||++.+.      .++.++||||||+++|||++ |          ..||....
T Consensus       156 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g----------~~p~~~~~  218 (287)
T 1u59_A          156 LSKALGADDSYY-TARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGVTMWEALSYG----------QKPYKKMK  218 (287)
T ss_dssp             TCEECTTCSCEE-CCCCSSCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS----------CCTTTTCC
T ss_pred             ceeeeccCccee-eccccccccccccCHHHhccC------CCCchhhHHHHHHHHHHHHcCC----------CCCcccCC
Confidence            998765432221 112334578899999999765      56689999999999999998 8          67776532


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                           .......+.. ..++..+     ..++.++.+++.+||+.||++|||+.++++.|+++..+...
T Consensus       219 -----~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          219 -----GPEVMAFIEQ-GKRMECP-----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             -----THHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             -----HHHHHHHHhc-CCcCCCC-----CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence                 2233333322 2233333     34667899999999999999999999999999999876543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.6e-43  Score=335.91  Aligned_cols=268  Identities=18%  Similarity=0.231  Sum_probs=203.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.++|++.+.||+|+||.||+|+.  +|+.||||++....... ....|+..+..++|+|++..++.+....   ...++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~l   82 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-QLHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVM   82 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCC-HHHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchh-HHHHHHHHHHHhhcCCCCCccccccCCC---CceEE
Confidence            347899999999999999999996  68999999886543322 2334444555589998887777665443   45799


Q ss_pred             eecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfG  286 (443)
                      ||||+ +|+|.+++.  ...+++..+..++.|++.||.|||++        +|+||||||+|||+   +.++.+||+|||
T Consensus        83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  153 (296)
T 3uzp_A           83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK--------NFIHRDVKPDNFLMGLGKKGNLVYIIDFG  153 (296)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred             EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence            99999 899999996  46799999999999999999999999        99999999999999   588899999999


Q ss_pred             CcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        287 LAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       287 la~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      +++..........   .......||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~~  217 (296)
T 3uzp_A          154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI------EQSRRDDLESLGYVLMYFNLG----------SLPWQG  217 (296)
T ss_dssp             TCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCTTSS
T ss_pred             CcccccccccccccccccccccccccccCChhhhcCC------CCCcchhhHHHHHHHHHHHhC----------CCCCCC
Confidence            9987665432211   112445799999999999876      677899999999999999999          667765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      ....... ..+........ ....+  .....++.++.+++.+||+.||++|||+.++++.|+++.+....
T Consensus       218 ~~~~~~~-~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~  284 (296)
T 3uzp_A          218 LKAATKR-QKYERISEKKM-STPIE--VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             CCCSSSS-SHHHHHHHHHH-HSCHH--HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             cCchhhh-hhhhhhccccc-CCchH--HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence            4322111 11111111100 00000  00123557899999999999999999999999999999876544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=346.65  Aligned_cols=250  Identities=22%  Similarity=0.277  Sum_probs=185.4

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .+.++|++.+.||+|+||.||+|.+  +++.||||++..... ......|+..+..++||||+++++++.+.    ...+
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~  124 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPNIIKLKEIFETP----TEIS  124 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECS----SEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-HHHHHHHHHHHHhCCCCCCcceeeeEecC----CeEE
Confidence            4457899999999999999999998  478899999865432 22233455556669999999999999776    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CCcEEEEecC
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFG  286 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfG  286 (443)
                      +||||+++|+|.+++.. ..+++.++..++.||+.||.|||+.        +|+||||||+|||++.   ++.+||+|||
T Consensus       125 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dikp~NIll~~~~~~~~~kl~Dfg  196 (349)
T 2w4o_A          125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN--------GIVHRDLKPENLLYATPAPDAPLKIADFG  196 (349)
T ss_dssp             EEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEecCCCcccEEEecCCCCCCEEEccCc
Confidence            99999999999999865 5689999999999999999999999        9999999999999976   8899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.. 
T Consensus       197 ~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~pf~~~~-  254 (349)
T 2w4o_A          197 LSKIVEHQVL-----MKTVCGTPGYCAPEILRGC------AYGPEVDMWSVGIITYILLCG----------FEPFYDER-  254 (349)
T ss_dssp             ---------------------CGGGSCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCTTCCTT-
T ss_pred             cccccCcccc-----cccccCCCCccCHHHhcCC------CCCcccchHHHHHHHHHHHhC----------CCCCCCCc-
Confidence            9976543211     2345799999999999876      677899999999999999999          67776532 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ........+....  ...+..+ ....+.++.+|+.+||+.||++|||+.|+++
T Consensus       255 ---~~~~~~~~i~~~~--~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          255 ---GDQFMFRRILNCE--YYFISPW-WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             ---CHHHHHHHHHTTC--CCCCTTT-TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---ccHHHHHHHHhCC--CccCCch-hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               2222222222111  1111111 1346678999999999999999999999886

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.5e-44  Score=344.98  Aligned_cols=252  Identities=21%  Similarity=0.334  Sum_probs=190.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCC------
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRN------  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~------  204 (443)
                      .++|++.+.||+|+||.||+|++  +|+.||||++......  ......|+..+..++||||+++++++.+...      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            36899999999999999999998  5899999998654322  2334567777777999999999998865432      


Q ss_pred             -----------------------------------------------cccEEEeeecccCcccHHHHhcc----cCCCHH
Q psy14889        205 -----------------------------------------------SCTQLWLVTHYHSFGSLYDHLNR----TTLNHH  233 (443)
Q Consensus       205 -----------------------------------------------~~~~~~lv~e~~~~gsL~~~l~~----~~l~~~  233 (443)
                                                                     ....+++||||+++|+|.+++.+    ...++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                           11247999999999999999965    335667


Q ss_pred             HHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCC--------CCCCCc
Q psy14889        234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD--------IPPNPR  305 (443)
Q Consensus       234 ~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~--------~~~~~~  305 (443)
                      .++.++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++..........        ......
T Consensus       165 ~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~  236 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSK--------GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ  236 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred             HHHHHHHHHHHHHHHHHhC--------CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence            7899999999999999999        999999999999999999999999999987765422111        112345


Q ss_pred             ccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCC
Q psy14889        306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRP  385 (443)
Q Consensus       306 ~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~  385 (443)
                      .||+.|+|||++.+.      .++.++||||||+++|||++|          ..|+...       ........ ..   
T Consensus       237 ~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~----------~~~~~~~-------~~~~~~~~-~~---  289 (332)
T 3qd2_B          237 VGTKLYMSPEQIHGN------NYSHKVDIFSLGLILFELLYS----------FSTQMER-------VRIITDVR-NL---  289 (332)
T ss_dssp             C-CGGGSCHHHHHCC------CCCTHHHHHHHHHHHHHHHSC----------CCCHHHH-------HHHHHHHH-TT---
T ss_pred             CCCcCccChHHhcCC------CCcchhhHHHHHHHHHHHHHc----------CCChhHH-------HHHHHHhh-cc---
Confidence            799999999999876      677899999999999999998          3332210       11111111 11   


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        386 VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       386 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.  .....+..+.+++.+||+.||++|||+.|+++
T Consensus       290 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          290 KFPL--LFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CCCH--HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             CCCc--ccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            1111  01234467899999999999999999999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6.4e-43  Score=331.37  Aligned_cols=250  Identities=24%  Similarity=0.324  Sum_probs=198.8

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||+|++......   ....+.|+..+..++||||+++++++...    ..
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   79 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----SF   79 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC----CE
Confidence            457899999999999999999998  5889999998654322   12234566666679999999999998766    45


Q ss_pred             EEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc---EEEEe
Q psy14889        209 LWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIAD  284 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~---~kl~D  284 (443)
                      .++||||+++|+|.+++. +..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.   +||+|
T Consensus        80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dikp~Nil~~~~~~~~~~kl~D  151 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN--------GIVHRNLKPENLLLASKAKGAAVKLAD  151 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcCcCCCCHHHEEEecCCCCCcEEEee
Confidence            799999999999988875 46799999999999999999999999        9999999999999987665   99999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++........     .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||.+.
T Consensus       152 fg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~~g----------~~pf~~~  210 (284)
T 3kk8_A          152 FGLAIEVNDSEA-----WHGFAGTPGYLSPEVLKKD------PYSKPVDIWACGVILYILLVG----------YPPFWDE  210 (284)
T ss_dssp             CTTCEECCSSCB-----CCCSCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCS
T ss_pred             ceeeEEcccCcc-----ccCCCCCcCCcCchhhcCC------CCCcccchHHHHHHHHHHHHC----------CCCCCCC
Confidence            999976654322     1345799999999999876      677899999999999999999          6777653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                           ........+.........+.   ....+.++.+++.+||+.||++|||+.|+++.
T Consensus       211 -----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          211 -----DQHRLYAQIKAGAYDYPSPE---WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             -----SHHHHHHHHHHTCCCCCTTT---TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -----chhHHHHHHHhccccCCchh---hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                 22333333322222222211   13356789999999999999999999999873

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=8.5e-44  Score=350.53  Aligned_cols=242  Identities=24%  Similarity=0.337  Sum_probs=190.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHH----HHHHHH-HHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSR----ETEIYS-TVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~----e~ei~~-~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|++.+.||+|+||.||+|+.  +++.||||++..........    ..|... +..++||||+++++++.+.    .
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~----~  112 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----D  112 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS----S
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC----C
Confidence            37899999999999999999998  57899999987643221111    122222 2347999999999998876    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|+||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~g~ikL~DFG  184 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL--------NIVYRDLKPENILLDSQGHIVLTDFG  184 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCHHHEEECCCCCEEEeeCc
Confidence            68999999999999999975 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......    .....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...  
T Consensus       185 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~G----------~~Pf~~~--  242 (373)
T 2r5t_A          185 LCKENIEHNS----TTSTFCGTPEYLAPEVLHKQ------PYDRTVDWWCLGAVLYEMLYG----------LPPFYSR--  242 (373)
T ss_dssp             BCGGGBCCCC----CCCSBSCCCCCCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCTTCCS--
T ss_pred             cccccccCCC----ccccccCCccccCHHHhCCC------CCCchhhhHHHHHHHHHHHcC----------CCCCCCC--
Confidence            9976432221    23456899999999999876      677899999999999999999          7777653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                         ...++...+...  ...++     ...+..+.+|+.+||+.||.+||++.+
T Consensus       243 ---~~~~~~~~i~~~--~~~~~-----~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          243 ---NTAEMYDNILNK--PLQLK-----PNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             ---BHHHHHHHHHHS--CCCCC-----SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             ---CHHHHHHHHHhc--ccCCC-----CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence               223333333222  12222     235678999999999999999999853

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-43  Score=338.27  Aligned_cols=257  Identities=28%  Similarity=0.356  Sum_probs=190.4

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc--------cchHHHHHHHH-HHhccCCCceeeeeeccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE--------ASWSRETEIYS-TVLLRHENILGYIGSDMT  201 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~--------~~~~~e~ei~~-~~~l~H~nIv~l~g~~~~  201 (443)
                      ...++|++.+.||+|+||.||+|+.  +++.||||++.....        ....+|.++.. +..++||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            3457999999999999999999996  689999998864321        12333433332 223469999999999876


Q ss_pred             cCC-cccEEEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        202 SRN-SCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       202 ~~~-~~~~~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      ... ....+++||||+. |+|.+++...   .+++..+..++.||+.||+|||+.        +|+||||||+|||++.+
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dlkp~Nil~~~~  156 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN--------CIVHRDLKPENILVTSG  156 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCTTTEEECTT
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEcCC
Confidence            542 2235799999998 5999999753   399999999999999999999999        99999999999999999


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                      +.+||+|||+++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          
T Consensus       157 ~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~l~~g----------  215 (308)
T 3g33_A          157 GTVKLADFGLARIYSYQMA-----LTPVVVTLWYRAPEVLLQS------TYATPVDMWSVGCIFAEMFRR----------  215 (308)
T ss_dssp             SCEEECSCSCTTTSTTCCC-----SGGGGCCCSSCCHHHHHTS------CCCSTHHHHHHHHHHHHTTTS----------
T ss_pred             CCEEEeeCccccccCCCcc-----cCCccccccccCchHHcCC------CCCchHHHHHHHHHHHHHHhC----------
Confidence            9999999999976543221     2345789999999999876      677899999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCC--CCCC-----------------CCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPV--LPNR-----------------WVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      ..||....    ..+.+..........+.  .+..                 ......+..+.+|+.+||+.||++|||+
T Consensus       216 ~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  291 (308)
T 3g33_A          216 KPLFCGNS----EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA  291 (308)
T ss_dssp             SCSCCCSS----HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCCC----HHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCH
Confidence            55665421    11222222211110000  0000                 0012356789999999999999999999


Q ss_pred             HHHHH
Q psy14889        419 LRVKK  423 (443)
Q Consensus       419 ~evl~  423 (443)
                      .|+++
T Consensus       292 ~e~l~  296 (308)
T 3g33_A          292 FRALQ  296 (308)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99885

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=7.8e-44  Score=342.78  Aligned_cols=261  Identities=22%  Similarity=0.380  Sum_probs=204.3

Q ss_pred             hhhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      ...++|++.+.||+|+||.||+|.+       +++.||||++.......  .....|+..+..+ +||||+++++++...
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            3457899999999999999999985       35789999986543322  2234555555557 799999999998765


Q ss_pred             CCcccEEEeeecccCcccHHHHhcccC-----------------CCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNRTT-----------------LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      .   ..+++||||+++|+|.+++....                 +++..+..++.|++.||.|||+.        +|+||
T Consensus       104 ~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~i~H~  172 (316)
T 2xir_A          104 G---GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--------KCIHR  172 (316)
T ss_dssp             T---SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT--------TCCCS
T ss_pred             C---CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC--------Ccccc
Confidence            3   24699999999999999996532                 78999999999999999999999        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......||+.|+|||++.+.      .++.++||||||+++|||+
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~  244 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDR------VYTIQSDVWSFGVLLWEIF  244 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSE--EETTEEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHH
T ss_pred             cCccceEEECCCCCEEECCCccccccccCccce--eccCCCcceeecCchhhccc------cccchhHHHHHHHHHHHHH
Confidence            999999999999999999999997664322211  12344678899999999776      6778999999999999999


Q ss_pred             h-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        346 R-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       346 t-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      | |          ..||....    ....+...+.. ......+     ...+..+.+++.+||+.||.+|||+.++++.
T Consensus       245 t~g----------~~p~~~~~----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          245 SLG----------ASPYPGVK----IDEEFCRRLKE-GTRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TTS----------CCSSTTCC----CSHHHHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCC----------CCCCcccc----hhHHHHHHhcc-CccCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8 7          66776532    11233332222 2222222     2355789999999999999999999999999


Q ss_pred             HHHHhhcc
Q psy14889        425 LIKLACAD  432 (443)
Q Consensus       425 L~~l~~~~  432 (443)
                      |+++.+..
T Consensus       305 L~~~~~~~  312 (316)
T 2xir_A          305 LGNLLQAN  312 (316)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhhh
Confidence            99998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-43  Score=349.83  Aligned_cols=249  Identities=20%  Similarity=0.280  Sum_probs=197.5

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||+|++..... .......|+..+..++||||+++++++.+.    ..++
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~~  124 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK----YEMV  124 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS----SEEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC----CEEE
Confidence            347899999999999999999998  588999999865432 222345667777779999999999998776    4589


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--CCcEEEEecC
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NGTCVIADFG  286 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfG  286 (443)
                      +||||+++|+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.  ++.+||+|||
T Consensus       125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givHrDlkp~NIll~~~~~~~vkL~DFG  196 (387)
T 1kob_A          125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--------SIVHLDIKPENIMCETKKASSVKIIDFG  196 (387)
T ss_dssp             EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred             EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeecccchHHeEEecCCCCceEEEecc
Confidence            99999999999999965  3689999999999999999999999        9999999999999974  4689999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.  
T Consensus       197 ~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg----------~~Pf~~~--  253 (387)
T 1kob_A          197 LATKLNPDEI-----VKVTTATAEFAAPEIVDRE------PVGFYTDMWAIGVLGYVLLSG----------LSPFAGE--  253 (387)
T ss_dssp             TCEECCTTSC-----EEEECSSGGGCCHHHHTTC------CBCHHHHHHHHHHHHHHHHHS----------CCSSCCS--
T ss_pred             cceecCCCcc-----eeeeccCCCccCchhccCC------CCCCcccEeeHhHHHHHHHhC----------CCCCCCC--
Confidence            9987654221     1234689999999999876      667899999999999999999          6777653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ........+.....  ..+.. ....++.++.+|+.+||+.||++|||+.|+++
T Consensus       254 ---~~~~~~~~i~~~~~--~~~~~-~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          254 ---DDLETLQNVKRCDW--EFDED-AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             ---SHHHHHHHHHHCCC--CCCSS-TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ---CHHHHHHHHHhCCC--CCCcc-ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence               12222222222111  11111 11235678999999999999999999999986

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=9.4e-44  Score=359.15  Aligned_cols=246  Identities=22%  Similarity=0.325  Sum_probs=193.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|++.+.||+|+||.||+|..  +|+.||||++.....    .......|+..+..++||||+++++++.+.    .
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----~  221 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----D  221 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET----T
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC----C
Confidence            347899999999999999999998  588999999865321    111223455555568999999999999876    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+ .        +|+||||||+|||++.++.+||+||
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--------giiHrDlkp~NIll~~~~~~kl~DF  293 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--------NVVYRDLKLENLMLDKDGHIKITDF  293 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--------CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC--------CEEECCCCHHHEEECCCCCEEEccC
Confidence            58999999999999999864 679999999999999999999998 6        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||... 
T Consensus       294 G~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~Pf~~~-  352 (446)
T 4ejn_A          294 GLCKEGIKDGAT----MKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ-  352 (446)
T ss_dssp             CCCCTTCC---------CCSSSCGGGCCHHHHHTS------CCCTHHHHHHHHHHHHHHHHS----------SCSSCCS-
T ss_pred             CCceeccCCCcc----cccccCCccccCHhhcCCC------CCCCccchhhhHHHHHHHhhC----------CCCCCCC-
Confidence            999754332221    2446899999999999776      677899999999999999999          7777653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                          ....+...+....  ..+|     ...+.++.+|+.+||+.||.+||     |+.|+++
T Consensus       353 ----~~~~~~~~i~~~~--~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          353 ----DHEKLFELILMEE--IRFP-----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             ----SHHHHHHHHHHCC--CCCC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ----CHHHHHHHHHhCC--CCCC-----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                2333333333222  2233     23567899999999999999999     9999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2e-43  Score=344.21  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=196.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||||++..... ....|.+++... .+||||+++++++.+.    ..+++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~-~~hp~iv~~~~~~~~~----~~~~l   93 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRY-GQHPNIITLKDVYDDG----KYVYV   93 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHH-TTSTTBCCEEEEEECS----SEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHh-cCCCCcCeEEEEEEcC----CEEEE
Confidence            457899999999999999999998  588999999866543 334455554331 3899999999998766    46899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC----CcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN----GTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfG  286 (443)
                      ||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||+.++    +.+||+|||
T Consensus        94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~--------givHrDlkp~NIl~~~~~~~~~~~kl~Dfg  165 (342)
T 2qr7_A           94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ--------GVVHRDLKPSNILYVDESGNPESIRICDFG  165 (342)
T ss_dssp             EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence            9999999999998864 5699999999999999999999999        99999999999998543    359999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.... 
T Consensus       166 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g----------~~Pf~~~~-  224 (342)
T 2qr7_A          166 FAKQLRAENGL----LMTPCYTANFVAPEVLERQ------GYDAACDIWSLGVLLYTMLTG----------YTPFANGP-  224 (342)
T ss_dssp             TCEECBCTTCC----BCCSSCCSSCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHS----------SCSSCSST-
T ss_pred             CcccCcCCCCc----eeccCCCccccCHHHhcCC------CCCCccCeeeHhHHHHHHhcC----------CCCCCCCC-
Confidence            99876543221    2345789999999999865      456799999999999999999          66776431 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .....++...+.....  .++.. .....+.++.+|+.+||+.||++|||+.++++
T Consensus       225 -~~~~~~~~~~i~~~~~--~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          225 -DDTPEEILARIGSGKF--SLSGG-YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             -TSCHHHHHHHHHHCCC--CCCST-TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -cCCHHHHHHHHccCCc--ccCcc-ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             1233444444333222  11111 11346678999999999999999999999886

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=5.6e-44  Score=350.57  Aligned_cols=191  Identities=23%  Similarity=0.328  Sum_probs=160.3

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-----CCCceeeeeeccccCC
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-----HENILGYIGSDMTSRN  204 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-----H~nIv~l~g~~~~~~~  204 (443)
                      ..+.++|.+.+.||+|+||.||+|++  +++.||||++..........+.|+..+..+.     ||||+++++++...  
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~--  108 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY--  108 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET--
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC--
Confidence            44568999999999999999999998  6889999998653333333334444444465     99999999998876  


Q ss_pred             cccEEEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-----
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-----  276 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-----  276 (443)
                        ..+++||||+ +++|.+++...   .+++..+..++.||+.||+|||+.        +|+||||||+|||++.     
T Consensus       109 --~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          109 --DHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM--------SLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             --TEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEESCTTCCE
T ss_pred             --CeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCcccEEEccccccc
Confidence              4589999999 88999999754   499999999999999999999999        9999999999999975     


Q ss_pred             --------------------CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHH
Q psy14889        277 --------------------NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYA  336 (443)
Q Consensus       277 --------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS  336 (443)
                                          ++.+||+|||+++.....       .....||+.|+|||++.+.      .++.++||||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~Diws  244 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------HGSIINTRQYRAPEVILNL------GWDVSSDMWS  244 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------CCSCCSCGGGCCHHHHTTC------CCCTTHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCC-------CcCccCcccccCcHHHcCC------CCCCccchHH
Confidence                                789999999999764432       1345789999999999876      6778999999


Q ss_pred             HHHHHHHHHhcc
Q psy14889        337 LGLVLWEVCRRT  348 (443)
Q Consensus       337 ~Gvvl~elltg~  348 (443)
                      |||++|||++|+
T Consensus       245 lG~il~ell~g~  256 (360)
T 3llt_A          245 FGCVLAELYTGS  256 (360)
T ss_dssp             HHHHHHHHHHSS
T ss_pred             HHHHHHHHHHCC
Confidence            999999999993

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.3e-43  Score=337.75  Aligned_cols=260  Identities=21%  Similarity=0.338  Sum_probs=202.7

Q ss_pred             ccccccc-eeeeecCeEEEEEEE----CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSE-CIGKGRYGEVWRGVW----HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~-~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|.+.+ .||+|+||.||+|.+    .++.||||++......   ......|+..+..++||||+++++++..     .
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~   90 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-----E   90 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-----S
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-----C
Confidence            6788888 999999999999965    3678999998654322   2233466777777999999999999832     2


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dikp~Nil~~~~~~~kl~Dfg  162 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--------NFVHRDLAARNVLLVTQHYAKISDFG  162 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC--------CeEcCCCCcceEEEeCCCcEEEccCC
Confidence            36899999999999999975 4599999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      ++........... ......+|+.|+|||.+.+.      .++.++||||||+++|||++ |          ..||... 
T Consensus       163 ~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~~~-  224 (291)
T 1xbb_A          163 LSKALRADENYYK-AQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYG----------QKPYRGM-  224 (291)
T ss_dssp             TCEECCTTCSEEE-C----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTT----------CCSSTTC-
T ss_pred             cceeeccCCCccc-ccccCCCCceeeChHHhccC------CCChhhhHHHHHHHHHHHHhcC----------CCCCCCC-
Confidence            9977654332211 11223567899999999765      55679999999999999999 8          6777653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                          ....+...+.. ...+..+     ..++..+.+++.+||+.||++|||+.++++.|+++........
T Consensus       225 ----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~  285 (291)
T 1xbb_A          225 ----KGSEVTAMLEK-GERMGCP-----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  285 (291)
T ss_dssp             ----CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence                22333333322 2233333     3466789999999999999999999999999999987655443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=8.4e-44  Score=343.73  Aligned_cols=259  Identities=21%  Similarity=0.365  Sum_probs=204.7

Q ss_pred             hhhhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      +...++|++.+.||+|+||.||+|.+.       ++.||||++.......  .....|+..+..++||||+++++++.+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            344578999999999999999999864       5789999986543222  2234567777779999999999998776


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      .    ..++||||+++|+|.+++..           ..+++..++.++.||+.||.|||+.        +|+||||||+|
T Consensus       101 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dikp~N  168 (322)
T 1p4o_A          101 Q----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--------KFVHRDLAARN  168 (322)
T ss_dssp             S----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCSCCSGGG
T ss_pred             C----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCccce
Confidence            3    46899999999999999964           3579999999999999999999999        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      ||++.++.+||+|||+++.........  ......||+.|+|||.+.+.      .++.++||||||+++|||++ |   
T Consensus       169 Ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g---  237 (322)
T 1p4o_A          169 CMVAEDFTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDG------VFTTYSDVWSFGVVLWEIATLA---  237 (322)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEE--GGGSSEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHHTS---
T ss_pred             EEEcCCCeEEECcCccccccccccccc--cccCCCCCCCccChhhhccC------CCCchhhHHHHHHHHHHHHhcC---
Confidence            999999999999999997654432111  11234578899999999876      67789999999999999999 6   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                             ..||...     ........+... ..+..+     ..++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus       238 -------~~p~~~~-----~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          238 -------EQPYQGL-----SNEQVLRFVMEG-GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             -------CCTTTTS-----CHHHHHHHHHTT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             -------CCccccC-----CHHHHHHHHHcC-CcCCCC-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                   6677653     233333333222 222222     3466789999999999999999999999999998765


Q ss_pred             c
Q psy14889        431 A  431 (443)
Q Consensus       431 ~  431 (443)
                      .
T Consensus       300 ~  300 (322)
T 1p4o_A          300 P  300 (322)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.7e-43  Score=341.15  Aligned_cols=257  Identities=24%  Similarity=0.397  Sum_probs=200.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCce--eEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGEN--VAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~--vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||.||+|++  ++..  ||||.+.....  .......|+..+..+ +||||+++++++.+.    ..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~----~~  100 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----GY  100 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET----TE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC----Cc
Confidence            6899999999999999999987  4554  49998764321  222334566666668 899999999998766    45


Q ss_pred             EEeeecccCcccHHHHhccc-----------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT-----------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~-----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +++||||+++|+|.+++...                 .+++..++.++.||+.||.|||+.        +|+||||||+|
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~N  172 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--------QFIHRDLAARN  172 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGG
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCccce
Confidence            89999999999999999653                 589999999999999999999999        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKA  350 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~  350 (443)
                      ||++.++.+||+|||+++.......     .....+|+.|+|||.+.+.      .++.++||||||+++|||++ |   
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g---  238 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYS------VYTTNSDVWSYGVLLWEIVSLG---  238 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCEECC-----C----CCTTTCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS---
T ss_pred             EEEcCCCeEEEcccCcCcccccccc-----ccCCCCCccccChhhhccc------cCCchhcchHHHHHHHHHHcCC---
Confidence            9999999999999999874332211     1233578899999999765      56689999999999999998 8   


Q ss_pred             CCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       351 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                             ..||...     ........+.. ......+     ..++..+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       239 -------~~pf~~~-----~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          239 -------GTPYCGM-----TCAELYEKLPQ-GYRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             -------CCTTTTC-----CHHHHHHHGGG-TCCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------CCCCCCC-----cHHHHHHHhhc-CCCCCCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                   6777653     22333333322 1222222     3366789999999999999999999999999999988


Q ss_pred             cccccc
Q psy14889        431 ADMYIH  436 (443)
Q Consensus       431 ~~~~~~  436 (443)
                      ......
T Consensus       301 ~~~~~~  306 (327)
T 1fvr_A          301 ERKTYV  306 (327)
T ss_dssp             SSSCSB
T ss_pred             hhcCcc
Confidence            765443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.9e-43  Score=349.23  Aligned_cols=263  Identities=25%  Similarity=0.357  Sum_probs=187.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhcc-CCCceeeeeeccccCCc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLR-HENILGYIGSDMTSRNS  205 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~  205 (443)
                      ..+.++|++.+.||+|+||.||+|.+  +|+.||||++.....   .......|+..+..+. ||||+++++++..... 
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~-   83 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND-   83 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS-
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC-
Confidence            34557899999999999999999987  589999998854322   1222235666666676 9999999999876543 


Q ss_pred             ccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       ..+++||||++ |+|.+++....+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+||
T Consensus        84 -~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DF  153 (388)
T 3oz6_A           84 -RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG--------GLLHRDMKPSNILLNAECHVKVADF  153 (388)
T ss_dssp             -SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCC
T ss_pred             -CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEeCCCCHHHeEEcCCCCEEecCC
Confidence             35899999998 6999999888999999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCc-----------------CCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcc
Q psy14889        286 GLAVSYSQLSNK-----------------MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT  348 (443)
Q Consensus       286 Gla~~~~~~~~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~  348 (443)
                      |+|+.+......                 ........+||+.|+|||++.+..     .++.++|||||||++|||++| 
T Consensus       154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~ell~g-  227 (388)
T 3oz6_A          154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST-----KYTKGIDMWSLGCILGEILCG-  227 (388)
T ss_dssp             TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHS-
T ss_pred             cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC-----CCCChhhHHHHHHHHHHHHhC-
Confidence            999866431110                 011123457999999999997631     567899999999999999999 


Q ss_pred             cCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCC----------------------------CCCCCCCC---------
Q psy14889        349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ----------------------------RPVLPNRW---------  391 (443)
Q Consensus       349 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~---------  391 (443)
                               ..||.+..    ..+.+..++.....                            .......+         
T Consensus       228 ---------~~pf~~~~----~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T 3oz6_A          228 ---------KPIFPGSS----TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK  294 (388)
T ss_dssp             ---------SCSCCCSS----HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHH
T ss_pred             ---------CCCCCCCC----HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccc
Confidence                     55554421    11111111110000                            00000000         


Q ss_pred             --CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        392 --VSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       392 --~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ....++.++.+|+.+||+.||++|||+.|+++.
T Consensus       295 ~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence              001345689999999999999999999999875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.7e-44  Score=354.58  Aligned_cols=254  Identities=23%  Similarity=0.269  Sum_probs=194.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      ..++|++.+.||+|+||.||+++.  +|+.||||++....      ......|.+++  ..++||||+++++++.+.   
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il--~~~~hp~Iv~l~~~~~~~---  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL--VNGDRRWITQLHFAFQDE---  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHH--HHSCTTTBCCEEEEEECS---
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHH--HhcCCCCeeeEEEEEeeC---
Confidence            347899999999999999999998  58999999986422      12233444444  458999999999999876   


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                       ..+++||||+++|+|.+++.+  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+
T Consensus       134 -~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------giiHrDLKp~NILld~~g~vkL~  204 (412)
T 2vd5_A          134 -NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL--------GYVHRDIKPDNILLDRCGHIRLA  204 (412)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEEC
T ss_pred             -CEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecccCHHHeeecCCCCEEEe
Confidence             468999999999999999975  4799999999999999999999998        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccc-cCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN-MDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |||+++.........   ....+||+.|+|||++..... .....++.++|||||||++|||++|          ..||.
T Consensus       205 DFGla~~~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG----------~~Pf~  271 (412)
T 2vd5_A          205 DFGSCLKLRADGTVR---SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG----------QTPFY  271 (412)
T ss_dssp             CCTTCEECCTTSCEE---CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS----------SCTTC
T ss_pred             echhheeccCCCccc---cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC----------CCCCC
Confidence            999998765432211   234579999999999974210 0001567899999999999999999          77776


Q ss_pred             CCCCCCCChHHH-HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCC---CcHHHHHH
Q psy14889        363 DLVPMDPSFDDM-RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR---LSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~  423 (443)
                      ..     ...+. .++... .....+|.  ....++.++.+||++||. +|.+|   |+++|+++
T Consensus       272 ~~-----~~~~~~~~i~~~-~~~~~~p~--~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          272 AD-----STAETYGKIVHY-KEHLSLPL--VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CS-----SHHHHHHHHHTH-HHHCCCC------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CC-----CHHHHHHHHHhc-ccCcCCCc--cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            53     22222 232211 11112221  112356789999999999 99998   58888865

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.9e-43  Score=337.36  Aligned_cols=259  Identities=25%  Similarity=0.387  Sum_probs=194.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||||++.....    .......|+..+..++||||+++++++...    ..
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~  106 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----NE  106 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET----TE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----Cc
Confidence            46899999999999999999997  689999999865321    122234567777779999999999998876    45


Q ss_pred             EEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                      .++||||+++|+|.+++..     ..+++..++.++.|++.||.|||+.        +|+||||||+||+++.++.+||+
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dl~p~NIl~~~~~~~kl~  178 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR--------RVMHRDIKPANVFITATGVVKLG  178 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC--------CeeCCCCcHHHEEEcCCCCEEEE
Confidence            8999999999999999853     5689999999999999999999999        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||++.........    .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||.+
T Consensus       179 Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~~l~~g----------~~p~~~  238 (310)
T 2wqm_A          179 DLGLGRFFSSKTTA----AHSLVGTPYYMSPERIHEN------GYNFKSDIWSLGCLLYEMAAL----------QSPFYG  238 (310)
T ss_dssp             CC----------------------CCSSCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCTTC-
T ss_pred             eccceeeecCCCcc----ccccCCCeeEeChHHhCCC------CCCchhhHHHHHHHHHHHHhC----------CCCCcc
Confidence            99998765532221    1334689999999999876      667899999999999999999          667654


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ..   .........+.. ...+..+    ...++.++.+++.+||+.||++|||+.++++.|+++.....
T Consensus       239 ~~---~~~~~~~~~~~~-~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          239 DK---MNLYSLCKKIEQ-CDYPPLP----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             -----CCHHHHHHHHHT-TCSCCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             cc---hhHHHHHHHhhc-ccCCCCc----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            31   122233333222 1222222    13356789999999999999999999999999999986543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.2e-43  Score=335.67  Aligned_cols=252  Identities=23%  Similarity=0.298  Sum_probs=190.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|+. +|+.||+|++......   ......|+..+..++||||+++++++.+.    ..+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l   77 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK----KRLVL   77 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS----SCEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC----CeEEE
Confidence            5799999999999999999998 5899999998654322   23334667777779999999999998776    35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||+++ +|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLAR  148 (288)
T ss_dssp             EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence            9999985 99998864  6799999999999999999999999        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||....    
T Consensus       149 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~g----------~~pf~~~~----  205 (288)
T 1ob3_A          149 AFGIPVRK----YTHEIVTLWYRAPDVLMGSK-----KYSTTIDIWSVGCIFAEMVNG----------TPLFPGVS----  205 (288)
T ss_dssp             HHCC-------------CCCTTCCHHHHTTCC-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS----
T ss_pred             ccCccccc----cccccccccccCchheeCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            65432211    13347899999999987541     466899999999999999999          55655421    


Q ss_pred             ChHHHHhhhhhcC---------------CCCCCC----C--CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQ---------------QRPVLP----N--RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~---------------~~~~~~----~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+..........               ..+..+    .  .......+.++.+|+.+||+.||++|||+.|+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1111111111000               000000    0  0011235678999999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2e-43  Score=340.72  Aligned_cols=252  Identities=25%  Similarity=0.333  Sum_probs=179.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||||++......  ......|+..+..++||||+++++++.+.    ..+++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~l   80 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE----NKLTL   80 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT----TEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC----CeEEE
Confidence            6899999999999999999987  5899999998654322  23334567777779999999999998776    45899


Q ss_pred             eecccCcccHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        212 VTHYHSFGSLYDHLNR-------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ||||++ |+|.+++..       ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--------~ivH~Dlkp~NIl~~~~~~~kl~D  151 (317)
T 2pmi_A           81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN--------KILHRDLKPQNLLINKRGQLKLGD  151 (317)
T ss_dssp             EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECC
T ss_pred             EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCChHHeEEcCCCCEEECc
Confidence            999998 699999853       3589999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||...
T Consensus       152 fg~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g----------~~pf~~~  212 (317)
T 2pmi_A          152 FGLARAFGIPVNT----FSSEVVTLWYRAPDVLMGSR-----TYSTSIDIWSCGCILAEMITG----------KPLFPGT  212 (317)
T ss_dssp             CSSCEETTSCCCC----CCCCCSCCTTCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHS----------SCSCCCS
T ss_pred             CccceecCCCccc----CCCCcccccccCchHhhCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCC
Confidence            9999776532221    23457899999999987541     466899999999999999999          5555442


Q ss_pred             CCCCCChHHHHhhhhhcC---------------CCCCCCCC-----------CCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        365 VPMDPSFDDMRKVICIDQ---------------QRPVLPNR-----------WVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-----------~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      .    ..+..........               ..+..+..           ......+.++.+|+.+||+.||++|||+
T Consensus       213 ~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  288 (317)
T 2pmi_A          213 N----DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA  288 (317)
T ss_dssp             S----HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             C----hHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH
Confidence            1    1111111111000               00000000           0012345689999999999999999999


Q ss_pred             HHHHH
Q psy14889        419 LRVKK  423 (443)
Q Consensus       419 ~evl~  423 (443)
                      .|+++
T Consensus       289 ~e~l~  293 (317)
T 2pmi_A          289 KQALH  293 (317)
T ss_dssp             HHHTT
T ss_pred             HHHhC
Confidence            99876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-43  Score=338.82  Aligned_cols=260  Identities=23%  Similarity=0.262  Sum_probs=195.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++.......    ...+.|+..+..++||||+++++++...    ..
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----~~  108 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----GQ  108 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET----TE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC----Ce
Confidence            37899999999999999999997  58899999986543221    2334677777779999999999998775    45


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dlkp~NIl~~~~~~~kl~Dfg~  180 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA--------GATHRDVKPENILVSADDFAYLVDFGI  180 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECSCCC
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------cCCcCCCChHHEEEcCCCCEEEecCcc
Confidence            8999999999999999975 5799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........   ......||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...   
T Consensus       181 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~~~---  238 (309)
T 2h34_A          181 ASATTDEKLT---QLGNTVGTLYYMAPERFSES------HATYRADIYALTCVLYECLTG----------SPPYQGD---  238 (309)
T ss_dssp             -------------------CCGGGCCGGGTCC----------CCCHHHHHHHHHHHHHHS----------SCSSCSC---
T ss_pred             Cccccccccc---cccccCCCcCccCHHHHcCC------CCCchHhHHHHHHHHHHHHHC----------CCCCCCc---
Confidence            8765432211   12345789999999999876      667899999999999999999          6777653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-cHHHHHHHHHHHhhcccc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVKKTLIKLACADMY  434 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~l~~~~~~  434 (443)
                        ....+...+......+.    .....++.++.+++.+||+.||++|| |++++++.|+++......
T Consensus       239 --~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~  300 (309)
T 2h34_A          239 --QLSVMGAHINQAIPRPS----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ  300 (309)
T ss_dssp             --HHHHHHHHHHSCCCCGG----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred             --hHHHHHHHhccCCCCcc----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence              12223333222111110    11233566899999999999999999 999999999998766543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=347.18  Aligned_cols=265  Identities=14%  Similarity=0.182  Sum_probs=200.8

Q ss_pred             hccccccceeeeecCeEEEEEEEC----------CceeEEEEeeccCccchHHHHHHHHHHhccCCCceee---------
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH----------GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY---------  195 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~----------~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l---------  195 (443)
                      .++|++.+.||+|+||.||+|...          ++.||||++...  .....|.++  +..++||||+++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNF--FQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHH--HHHHCCHHHHHHHHHHTTCTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHH--HHHhcccchhhhhhhhccCCc
Confidence            368999999999999999999883          689999998654  334445444  444899999984         


Q ss_pred             ------eeeccccCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        196 ------IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       196 ------~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                            ++++....   ...++||||+ +|+|.+++..   ..+++..++.++.||+.||.|||+.        +|+|||
T Consensus       117 ~~i~~~~~~~~~~~---~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivH~D  184 (352)
T 2jii_A          117 LAIPTCMGFGVHQD---KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN--------EYVHGN  184 (352)
T ss_dssp             CSCCCCCEEEEETT---TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCSC
T ss_pred             cCccchhhccccCC---cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCC
Confidence                  44444322   4689999999 8999999975   5799999999999999999999999        999999


Q ss_pred             CCCCCEEEcCCC--cEEEEecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHH
Q psy14889        267 IKSKNILVKTNG--TCVIADFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL  341 (443)
Q Consensus       267 lk~~NiLl~~~~--~~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl  341 (443)
                      |||+|||++.++  .+||+|||+++.+........   .......||+.|+|||++.+.      .++.++||||||+++
T Consensus       185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il  258 (352)
T 2jii_A          185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC------GPSRRSDLQSLGYCM  258 (352)
T ss_dssp             CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHH
T ss_pred             CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC------CCCchhhHHHHHHHH
Confidence            999999999998  999999999987654332211   112345799999999999876      677899999999999


Q ss_pred             HHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhh-hcCCCCCCCCC-CCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVIC-IDQQRPVLPNR-WVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       342 ~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      |||++|          ..||.....   ....+..... .......+... ......+.++.+++.+||+.||++|||+.
T Consensus       259 ~el~~g----------~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  325 (352)
T 2jii_A          259 LKWLYG----------FLPWTNCLP---NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYA  325 (352)
T ss_dssp             HHHHHS----------CCTTGGGTT---CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             HHHHhC----------CCCcccCCc---CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHH
Confidence            999999          677766432   2222222211 11111111111 11123467899999999999999999999


Q ss_pred             HHHHHHHHHhhcccc
Q psy14889        420 RVKKTLIKLACADMY  434 (443)
Q Consensus       420 evl~~L~~l~~~~~~  434 (443)
                      ++++.|+++.+....
T Consensus       326 ~l~~~L~~~~~~~~~  340 (352)
T 2jii_A          326 MLRNNLEALLQDLRV  340 (352)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999876543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=9.7e-43  Score=333.47  Aligned_cols=248  Identities=30%  Similarity=0.441  Sum_probs=201.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ..+.|++.+.||+|+||.||+|..  +++.||||++......  ....+.|+..+..++||||+++++++...    ..+
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   95 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD----TKL   95 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----CeE
Confidence            346799999999999999999987  5889999998654322  22334566666679999999999998775    458


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++||||+++++|.+++....+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++.
T Consensus        96 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE--------KKIHRDIKAANVLLSEHGEVKLADFGVAG  167 (303)
T ss_dssp             EEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCChheEEECCCCCEEEeecccce
Confidence            9999999999999999988999999999999999999999999        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...     
T Consensus       168 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~-----  222 (303)
T 3a7i_A          168 QLTDTQIK----RNTFVGTPFWMAPEVIKQS------AYDSKADIWSLGITAIELARG----------EPPHSEL-----  222 (303)
T ss_dssp             ECBTTBCC----BCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTS-----
T ss_pred             ecCccccc----cCccCCCcCccCHHHHhcC------CCCchhhhHHHHHHHHHHccC----------CCCCCCc-----
Confidence            76543211    2345789999999999876      667899999999999999999          6677553     


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ........+.. ...+.++     ..++..+.+++.+||+.||++|||+.++++.
T Consensus       223 ~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          223 HPMKVLFLIPK-NNPPTLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CHHHHHHHHHH-SCCCCCC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             CHHHHHHHhhc-CCCCCCc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            12222222221 2222222     3356789999999999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.1e-43  Score=331.76  Aligned_cols=255  Identities=21%  Similarity=0.313  Sum_probs=200.0

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccC------
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSR------  203 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~------  203 (443)
                      ..+.++|++.+.||+|+||.||+|.+  +++.||+|++.... ....  .|+..+..++||||+++++++....      
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAE--REVKALAKLDHVNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGH--HHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHH--HHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence            34557899999999999999999998  58999999986543 2333  4455555599999999999875411      


Q ss_pred             ------CcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        204 ------NSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       204 ------~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                            .....+++||||+++|+|.+++..   ..+++..+..++.|++.||.|||+.        +|+||||||+|||+
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~  155 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK--------KLINRDLKPSNIFL  155 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEE
T ss_pred             cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCCHHHEEE
Confidence                  112458999999999999999953   4699999999999999999999999        99999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcc
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF  354 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~  354 (443)
                      +.++.+||+|||++........     .....||+.|+|||.+.+.      .++.++||||||+++|||++|       
T Consensus       156 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~-------  217 (284)
T 2a19_B          156 VDTKQVKIGDFGLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQ------DYGKEVDLYALGLILAELLHV-------  217 (284)
T ss_dssp             EETTEEEECCCTTCEESSCCSC-----CCCCCSCCTTSCHHHHHCS------CCCTHHHHHHHHHHHHHHHSC-------
T ss_pred             cCCCCEEECcchhheecccccc-----ccccCCcccccChhhhccC------CCcchhhhHHHHHHHHHHHhc-------
Confidence            9999999999999977654322     2334689999999999875      667899999999999999999       


Q ss_pred             cccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       355 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                         ..|+...       .........    ..++     ...+..+.+++.+||+.||++|||+.|+++.|..+......
T Consensus       218 ---~~~~~~~-------~~~~~~~~~----~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          218 ---CDTAFET-------SKFFTDLRD----GIIS-----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             ---CSSHHHH-------HHHHHHHHT----TCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             ---CCcchhH-------HHHHHHhhc----cccc-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence               4444321       111111111    1112     22456799999999999999999999999999998876544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.8e-43  Score=368.39  Aligned_cols=256  Identities=19%  Similarity=0.314  Sum_probs=197.9

Q ss_pred             ccccccc-eeeeecCeEEEEEEE----CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSE-CIGKGRYGEVWRGVW----HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~-~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +++.+.+ .||+|+||.||+|.+    ++..||||+++....  .......|+..+..++|||||++++++...     .
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~-----~  409 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-----A  409 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS-----S
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC-----C
Confidence            3445555 799999999999987    245799999865432  223334666667779999999999998653     2


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++||||+++|+|.+++..  ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~iiHrDlkp~NILl~~~~~vkL~DFG  481 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK--------NFVHRNLAARNVLLVNRHYAKISDFG  481 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred             eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence            7999999999999999953  5699999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      +++.+........ ......+|+.|+|||++.+.      .++.++|||||||++|||++ |          ..||.+..
T Consensus       482 la~~~~~~~~~~~-~~~~~~~~~~y~APE~~~~~------~~~~~sDvwSlGv~l~ellt~G----------~~Pf~~~~  544 (613)
T 2ozo_A          482 LSKALGADDSYYT-ARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGVTMWEALSYG----------QKPYKKMK  544 (613)
T ss_dssp             TTTTCC---------------CCTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTCC
T ss_pred             CcccccCCCceee-eccCCCCccceeCHhhhcCC------CCCcHHHHHHHHHHHHHHHHCC----------CCCCCCCC
Confidence            9987654322111 11223467899999999876      67789999999999999998 8          77887642


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ..++...+.. ..+...+     ..++.++.+||.+||+.||++|||+.+|++.|+.+....
T Consensus       545 -----~~~~~~~i~~-~~~~~~p-----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          545 -----GPEVMAFIEQ-GKRMECP-----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             -----SHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHc-CCCCCCC-----CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence                 2333333322 2333333     346788999999999999999999999999999986543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7e-44  Score=343.51  Aligned_cols=270  Identities=21%  Similarity=0.290  Sum_probs=201.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||++..  +|+.||||++...... ......|+..+..++||||+++++++..........++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            36899999999999999999997  6899999988654332 22334566666679999999999998754433457899


Q ss_pred             eecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ||||+++|+|.+++..     ..+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------~ivH~dlkp~NIl~~~~~~~kl~dfg  179 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--------GYAHRDLKPTNILLGDEGQPVLMDLG  179 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEEcCCCCEEEEecC
Confidence            9999999999999864     5699999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCC-----CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        287 LAVSYSQLSNKMD-----IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       287 la~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      ++...........     .......||+.|+|||++.+....   .++.++||||||+++|||++|          ..||
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~~~~Di~slG~il~el~~g----------~~p~  246 (317)
T 2buj_A          180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC---VIDERTDVWSLGCVLYAMMFG----------EGPY  246 (317)
T ss_dssp             SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEE---EECTHHHHHHHHHHHHHHHHS----------SCTT
T ss_pred             cchhcccccccccccccccccccccCCcccCCHhHhccCCCc---CCCchhhHHHHHHHHHHHHhC----------CCCh
Confidence            9865432111000     000123578999999998754211   356899999999999999999          5666


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      .........   ....... ...  .+.   ....+..+.+++.+||+.||.+|||+.++++.|+.+....+.
T Consensus       247 ~~~~~~~~~---~~~~~~~-~~~--~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  310 (317)
T 2buj_A          247 DMVFQKGDS---VALAVQN-QLS--IPQ---SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG  310 (317)
T ss_dssp             HHHHHTTSC---HHHHHHC-C----CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred             hhhhcccch---hhHHhhc-cCC--CCc---cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence            432111111   1111111 111  111   123567899999999999999999999999999998766544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.6e-43  Score=338.97  Aligned_cols=262  Identities=20%  Similarity=0.327  Sum_probs=193.6

Q ss_pred             hccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCc-
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNS-  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~-  205 (443)
                      .++|.+.+.||+|+||.||+|.+.     +..||||++.......   .....|+..+..++||||+++++++...... 
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            368999999999999999999872     3479999986543221   2234566677779999999999998765432 


Q ss_pred             ccEEEeeecccCcccHHHHhc-------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLN-------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG  278 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~  278 (443)
                      ....++||||+++|+|.+++.       ...+++..++.++.||+.||.|||+.        +|+||||||+|||++.++
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR--------NFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT--------TCCCCCCSGGGEEECTTS
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCcceEEEcCCC
Confidence            124699999999999999983       24699999999999999999999998        999999999999999999


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCccccc
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEY  357 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~  357 (443)
                      .+||+|||+++........  .......+++.|+|||.+.+.      .++.++||||||+++|||++ |          
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g----------  246 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADR------VYTSKSDVWAFGVTMWEIATRG----------  246 (313)
T ss_dssp             CEEECSCSCC------------------CCGGGSCHHHHHSS------CCCHHHHHHHHHHHHHHHHTTS----------
T ss_pred             cEEEeecCcceeccccccc--CcccccCCCccccCchhhcCC------CccchhhhHHHHHHHHHHHhcC----------
Confidence            9999999999766543211  112334578899999999776      67789999999999999999 6          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ..||....     ...+...+.. ...+..+     ..++..+.+++.+||+.||++|||+.++++.|+++.+..+
T Consensus       247 ~~p~~~~~-----~~~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          247 MTPYPGVQ-----NHEMYDYLLH-GHRLKQP-----EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             CCSSTTCC-----GGGHHHHHHT-TCCCCCB-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             CCCCccCC-----HHHHHHHHHc-CCCCCCC-----ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            56665531     2222222221 2222222     3466789999999999999999999999999999987654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.8e-43  Score=342.43  Aligned_cols=247  Identities=26%  Similarity=0.385  Sum_probs=194.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..+.|+..+.||+|+||.||+|..  +|+.||||++.......    .....|+..+..++||||+++++++...    .
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~  127 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----H  127 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----T
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC----C
Confidence            346799999999999999999997  68999999986543211    1224566666679999999999998776    4


Q ss_pred             EEEeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..++||||+. |+|.+++.  +..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus       128 ~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~kL~Df  198 (348)
T 1u5q_A          128 TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--------NMIHRDVKAGNILLSEPGLVKLGDF  198 (348)
T ss_dssp             EEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred             eEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHEEECCCCCEEEeec
Confidence            5899999998 68888874  46799999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.....        ....||+.|+|||++.+...   ..++.++|||||||++|||++|          ..||....
T Consensus       199 G~a~~~~~~--------~~~~gt~~y~aPE~~~~~~~---~~~~~~~DiwslG~il~ell~g----------~~p~~~~~  257 (348)
T 1u5q_A          199 GSASIMAPA--------NSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAER----------KPPLFNMN  257 (348)
T ss_dssp             TTCBSSSSB--------CCCCSCGGGCCHHHHHTTSS---CCBCTHHHHHHHHHHHHHHHHS----------SCTTTTSC
T ss_pred             cCceecCCC--------CcccCCcceeCHhhhccccC---CCCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            999765432        23479999999999853211   1567899999999999999999          66775531


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                          ....+.... .. ..+...    ....+..+.+|+.+||+.||++|||+.++++.
T Consensus       258 ----~~~~~~~~~-~~-~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          258 ----AMSALYHIA-QN-ESPALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             ----HHHHHHHHH-HS-CCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ----hHHHHHHHH-hc-CCCCCC----CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                122222222 21 222222    13356789999999999999999999998763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=7.9e-43  Score=350.85  Aligned_cols=277  Identities=19%  Similarity=0.212  Sum_probs=197.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC-cc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN-SC  206 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~  206 (443)
                      .+.++|.+.+.||+|+||.||+|.+  +++.||||++......   ......|+..+..++||||+++++++..... ..
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            3457999999999999999999998  5789999998653222   1223456666677999999999999876531 12


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+++||||+. |+|.++++. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus       103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------givHrDlkp~NILl~~~~~~kL~DF  173 (432)
T 3n9x_A          103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES--------GIIHRDLKPANCLLNQDCSVKVCDF  173 (432)
T ss_dssp             CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCC
T ss_pred             CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCCCCCCCHHHeEECCCCCEEEccC
Confidence            35899999987 599999975 4599999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcC------------------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        286 GLAVSYSQLSNKM------------------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       286 Gla~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                      |+|+.........                  .......+||+.|+|||++....     .++.++|||||||++|||++|
T Consensus       174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-----~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE-----NYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             TTCEEC-------------------------------CCCCCTTCCHHHHTTCS-----CCCTHHHHHHHHHHHHHHHTT
T ss_pred             CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCC-----CCCcccccchHHHHHHHHHhc
Confidence            9998765432110                  01124568999999999875431     577899999999999999998


Q ss_pred             ccCCCcccccCCCCCCCCCCC-----------------------------CC--------hHHHHhhhhhcCCCCCCCCC
Q psy14889        348 TKANGIFEEYKAPYHDLVPMD-----------------------------PS--------FDDMRKVICIDQQRPVLPNR  390 (443)
Q Consensus       348 ~~~~~~~~~~~~P~~~~~~~~-----------------------------~~--------~~~~~~~~~~~~~~~~~~~~  390 (443)
                      ..|+.....+..|+.......                             +.        .......+.........+..
T Consensus       249 ~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (432)
T 3n9x_A          249 LQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLK  328 (432)
T ss_dssp             CTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH
T ss_pred             ccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHH
Confidence            777655544444443211100                             00        00011111111111100000


Q ss_pred             CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        391 WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       391 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       329 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          329 QKYPSISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000235678999999999999999999999987

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=4.1e-43  Score=358.28  Aligned_cols=255  Identities=24%  Similarity=0.388  Sum_probs=200.2

Q ss_pred             hHHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        128 LLIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       128 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      ...+..+.++|++.+.||+|+||.||+|..  +++.||||++....   ........|+..+..++||||+++++++.+.
T Consensus        14 ~~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           14 LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS   93 (486)
T ss_dssp             CTTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC
Confidence            334455668999999999999999999998  58999999985432   2222334566666669999999999998776


Q ss_pred             CCcccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc---CCC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK---TNG  278 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~---~~~  278 (443)
                          ..+++||||+.+|+|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++   .++
T Consensus        94 ----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~  161 (486)
T 3mwu_A           94 ----SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--------NIVHRDLKPENILLESKEKDC  161 (486)
T ss_dssp             ----SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEESSSSTTC
T ss_pred             ----CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeccCchHHEEEecCCCCC
Confidence                45899999999999998885 46799999999999999999999999        999999999999995   456


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+++.......     .....||+.|+|||++.+       .++.++|||||||++|||++|          .
T Consensus       162 ~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g----------~  219 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNTK-----MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSG----------T  219 (486)
T ss_dssp             CEEECSCSCTTTBCCC---------CCTTGGGGCCGGGGGS-------CCCHHHHHHHHHHHHHHHHHS----------S
T ss_pred             CEEEEECCcCeECCCCCc-----cCCCcCCCCCCCHHHhCC-------CCCchhhHHHHHHHHHHHHhC----------C
Confidence            799999999976654321     234579999999999875       466899999999999999999          7


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .||.+.     ....+...+.........+.   ...++.++.+|+.+||+.||++|||+.++++.
T Consensus       220 ~pf~~~-----~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          220 PPFYGK-----NEYDILKRVETGKYAFDLPQ---WRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             CSSCCS-----SHHHHHHHHHHTCCCSCSGG---GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCCCC-----CHHHHHHHHHhCCCCCCCcc---cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            777653     22333333333222222221   13456789999999999999999999999874

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3e-43  Score=346.17  Aligned_cols=251  Identities=12%  Similarity=0.178  Sum_probs=197.5

Q ss_pred             hhccccccceeeeecCeEEEEEE-----E--CCceeEEEEeeccCccchHHHHHHHHHHhcc---CCCceeeeeeccccC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGV-----W--HGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGSDMTSR  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~-----~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~---H~nIv~l~g~~~~~~  203 (443)
                      ..++|.+.+.||+|+||.||+|.     .  +++.||||++.......+..|.++...  ++   |+||+++++++....
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~--l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMER--LKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHH--SCGGGGGGBCCEEEEEECSS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHH--hhhhhhhhhhhhheeeecCC
Confidence            34789999999999999999994     2  588999999876655555555544443  55   999999999988764


Q ss_pred             CcccEEEeeecccCcccHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLN------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-  276 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-  276 (443)
                          ..++||||+++|+|.+++.      ...+++..++.++.||+.||+|||+.        +|+||||||+|||++. 
T Consensus       141 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------~ivHrDiKp~NIll~~~  208 (365)
T 3e7e_A          141 ----GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC--------EIIHGDIKPDNFILGNG  208 (365)
T ss_dssp             ----CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCSGGGEEECGG
T ss_pred             ----CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC--------CeecCCCCHHHEEeccc
Confidence                4699999999999999995      35699999999999999999999998        9999999999999998 


Q ss_pred             ----------CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        277 ----------NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       277 ----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                                ++.+||+|||+|+.+.......  ......||+.|+|||++.+.      .++.++|||||||++|||+|
T Consensus       209 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ellt  280 (365)
T 3e7e_A          209 FLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--IFTAKCETSGFQCVEMLSNK------PWNYQIDYFGVAATVYCMLF  280 (365)
T ss_dssp             GTCC------CTTEEECCCTTCEEGGGSCTTE--EECCSSCTTSCCCHHHHTTC------CBSTHHHHHHHHHHHHHHHH
T ss_pred             ccCccccccccCCEEEeeCchhhhhhccCCCc--eeeeecCCCCCCChHHhcCC------CCCccccHHHHHHHHHHHHh
Confidence                      8999999999997654221111  12345799999999999876      67789999999999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCC-CcHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR-LSALRVKKTL  425 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L  425 (443)
                      |          ..||.......         ..   ....++.    ...++.+.+++..|++.+|.+| |++.++.+.|
T Consensus       281 g----------~~pf~~~~~~~---------~~---~~~~~~~----~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          281 G----------TYMKVKNEGGE---------CK---PEGLFRR----LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             S----------SCCCEEEETTE---------EE---ECSCCTT----CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             C----------CCccccCCCCc---------ee---echhccc----cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            9          55554321100         00   0011111    1135678999999999999999 4789999999


Q ss_pred             HHHhhcc
Q psy14889        426 IKLACAD  432 (443)
Q Consensus       426 ~~l~~~~  432 (443)
                      +++.+..
T Consensus       335 ~~~l~~~  341 (365)
T 3e7e_A          335 KKVFQQH  341 (365)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9887654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=4.5e-43  Score=355.35  Aligned_cols=244  Identities=24%  Similarity=0.383  Sum_probs=197.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|.+  +|+.||||++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~----~~~   91 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP----SDI   91 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEE
Confidence            6899999999999999999998  589999999865321    112334667777779999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givHrDLkp~NIll~~~~~vkL~DFG~a  163 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--------MVVHRDLKPENVLLDAHMNAKIADFGLS  163 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT--------TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCCcccccHHHEEEecCCCeEEEeccch
Confidence            999999999999999964 5799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......     .....||+.|+|||++.+..     ..+.++|||||||++|||++|          ..||.+.    
T Consensus       164 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwSlGvil~elltG----------~~Pf~~~----  219 (476)
T 2y94_A          164 NMMSDGEF-----LRTSCGSPNYAAPEVISGRL-----YAGPEVDIWSSGVILYALLCG----------TLPFDDD----  219 (476)
T ss_dssp             EECCTTCC-----BCCCCSCSTTCCHHHHTTCC-----BCSHHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             hhcccccc-----ccccCCCcCeEChhhccCCC-----CCCCcceehhhHHHHHHHhhC----------CCCCCCC----
Confidence            87654221     23457999999999998752     124789999999999999999          6777653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ....+...+...  ....|     ...+.++.+|+.+||+.||++|||+.|+++
T Consensus       220 -~~~~~~~~i~~~--~~~~p-----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          220 -HVPTLFKKICDG--IFYTP-----QYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -SSHHHHHHHHTT--CCCCC-----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CHHHHHHHHhcC--CcCCC-----ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence             122233322221  12222     234567999999999999999999999987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.7e-43  Score=339.41  Aligned_cols=250  Identities=20%  Similarity=0.271  Sum_probs=198.2

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-------chHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-------SWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .+.++|++.+.||+|+||.||+|..  +|+.||||++......       ....+.|+..+..++||||+++++++.+. 
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-   87 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR-   87 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC-
Confidence            4457899999999999999999998  5889999998654321       22334566666679999999999998766 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----  278 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----  278 (443)
                         ..+++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++    
T Consensus        88 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~--------~ivH~dikp~NIl~~~~~~~~~  156 (321)
T 2a2a_A           88 ---TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--------KIAHFDLKPENIMLLDKNIPIP  156 (321)
T ss_dssp             ---SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESCTTSSSC
T ss_pred             ---CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCChHHEEEecCCCCcC
Confidence               458999999999999999964 5689999999999999999999999        999999999999999888    


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||++........     .....||+.|+|||++.+.      .++.++||||||+++|||++|          .
T Consensus       157 ~~kl~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~  215 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG----------A  215 (321)
T ss_dssp             CEEECCCTTCEECCTTCC-----CCCCCSCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------C
T ss_pred             CEEEccCccceecCcccc-----ccccCCCCCccCcccccCC------CCCCccccHHHHHHHHHHHHC----------C
Confidence            799999999977654321     2345799999999999766      667899999999999999999          6


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .||...     ........+..  .....+.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus       216 ~pf~~~-----~~~~~~~~i~~--~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          216 SPFLGD-----TKQETLANITS--VSYDFDEE-FFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CSSCCS-----SHHHHHHHHHT--TCCCCCHH-HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             CCCCCC-----CHHHHHHHHHh--cccccChh-hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            777553     22222222221  11111110 01234567999999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-43  Score=340.09  Aligned_cols=264  Identities=27%  Similarity=0.403  Sum_probs=201.6

Q ss_pred             hccccccceeeeecCeEEEEEEE------CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW------HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|++.+.||+|+||.||+|.+      +++.||||++...... ....+.|+..+..++||||+++++++.....  .
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~  117 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--R  117 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC--C
Confidence            46799999999999999999985      4789999998654332 2234567777777999999999999876532  3


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++||||+++|+|.+++..  ..+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus       118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dikp~NIli~~~~~~kL~Df  189 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--------RYIHRDLATRNILVENENRVKIGDF  189 (326)
T ss_dssp             CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEEEETTEEEECCC
T ss_pred             ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--------CEeccCCCcceEEEcCCCcEEEecC
Confidence            47899999999999999975  4599999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC-
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL-  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~-  364 (443)
                      |++........... ......++..|+|||.+.+.      .++.++||||||+++|||+||..          ||... 
T Consensus       190 g~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~tg~~----------~~~~~~  252 (326)
T 2w1i_A          190 GLTKVLPQDKEYYK-VKEPGESPIFWYAPESLTES------KFSVASDVWSFGVVLYELFTYIE----------KSKSPP  252 (326)
T ss_dssp             TTCEECCSSCSEEE-CSSCCSCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHHTTC----------GGGSHH
T ss_pred             cchhhccccccccc-cccCCCCceeEECchhhcCC------CCCchhhHHHHHHHHHHHHhcCC----------CCCCCH
Confidence            99987654332111 11234577889999999775      55689999999999999999944          33221 


Q ss_pred             ------CCCCCC-h---HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        365 ------VPMDPS-F---DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       365 ------~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                            ...... .   ..+...+. ...++..+     ..++.++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          253 AEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRP-----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhccccchhhhHHHHHHHhh-cCCCCCCC-----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                  000001 0   11112221 12222222     34677899999999999999999999999999998764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=9.3e-43  Score=329.16  Aligned_cols=256  Identities=20%  Similarity=0.270  Sum_probs=199.7

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.++|++.+.||+|+||.||+|..  ++..||+|++...... ......|+..+..++||||+++++++.+.    ...
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~   81 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN----TDI   81 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SEE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC----CeE
Confidence            3457899999999999999999998  4678999988654322 22334566666779999999999998766    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEEEec
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIADF  285 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl~Df  285 (443)
                      ++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||+   +.++.+||+||
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~~~~~l~Df  153 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL--------NVAHRDLKPENFLFLTDSPDSPLKLIDF  153 (277)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccCCCCCHHHEEEecCCCCCcEEEEec
Confidence            999999999999998854 6689999999999999999999999        99999999999999   78889999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++........     .....||+.|+|||.+.+       .++.++||||||+++|||++|          ..||... 
T Consensus       154 g~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g----------~~p~~~~-  210 (277)
T 3f3z_A          154 GLAARFKPGKM-----MRTKVGTPYYVSPQVLEG-------LYGPECDEWSAGVMMYVLLCG----------YPPFSAP-  210 (277)
T ss_dssp             TTCEECCTTSC-----BCCCCSCTTTCCHHHHTT-------CBCTTHHHHHHHHHHHHHHHS----------SCSSCCS-
T ss_pred             ccceeccCccc-----hhccCCCCCccChHHhcc-------cCCchhhehhHHHHHHHHHHC----------CCCCCCC-
Confidence            99976654322     134479999999999864       456899999999999999999          6777653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--HHHHHhh
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK--TLIKLAC  430 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~l~~  430 (443)
                          ........+....  ...+.. ....++..+.+++.+||+.||++|||+.++++  .+++...
T Consensus       211 ----~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          211 ----TDSEVMLKIREGT--FTFPEK-DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             ----SHHHHHHHHHHCC--CCCCHH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             ----CHHHHHHHHHhCC--CCCCch-hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence                2233333222221  111110 00135678999999999999999999999986  4444443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.1e-43  Score=343.27  Aligned_cols=241  Identities=21%  Similarity=0.284  Sum_probs=193.2

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---------chHHHHHHHHHHhccCCCceeeeeeccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---------SWSRETEIYSTVLLRHENILGYIGSDMT  201 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---------~~~~e~ei~~~~~l~H~nIv~l~g~~~~  201 (443)
                      ...++|++.+.||+|+||.||+|..  +++.||||++......         ......|+..+..++||||+++++++.+
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            4557899999999999999999987  6889999998654211         1112345555666999999999999876


Q ss_pred             cCCcccEEEeeecccCcc-cHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc
Q psy14889        202 SRNSCTQLWLVTHYHSFG-SLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT  279 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~g-sL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~  279 (443)
                      .    ..+++||||+..| +|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.
T Consensus       101 ~----~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~  168 (335)
T 3dls_A          101 Q----GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK--------DIIHRDIKDENIVIAEDFT  168 (335)
T ss_dssp             S----SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTSC
T ss_pred             C----CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEEeccCHHHEEEcCCCc
Confidence            6    4589999999777 99999975 4799999999999999999999999        9999999999999999999


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCC-CCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFES-FKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      +||+|||+++.......     .....||+.|+|||++.+.      .+ +.++|||||||++|||++|          .
T Consensus       169 ~kL~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~el~~g----------~  227 (335)
T 3dls_A          169 IKLIDFGSAAYLERGKL-----FYTFCGTIEYCAPEVLMGN------PYRGPELEMWSLGVTLYTLVFE----------E  227 (335)
T ss_dssp             EEECCCTTCEECCTTCC-----BCEECSCGGGCCHHHHTTC------CBCSHHHHHHHHHHHHHHHHHS----------S
T ss_pred             EEEeecccceECCCCCc-----eeccCCCccccChhhhcCC------CCCCCcccchhHHHHHHHHHhC----------C
Confidence            99999999977654322     1335799999999999875      33 5789999999999999999          6


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .||....          ...   ......+     ..++.++.+|+.+||+.||++|||+.++++.
T Consensus       228 ~pf~~~~----------~~~---~~~~~~~-----~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          228 NPFCELE----------ETV---EAAIHPP-----YLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CSCSSGG----------GGT---TTCCCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             CchhhHH----------HHH---hhccCCC-----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            6765421          011   0111111     2255689999999999999999999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.8e-43  Score=334.23  Aligned_cols=251  Identities=22%  Similarity=0.335  Sum_probs=196.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +++.||+|++......   ......|+..+..++||||+++++++.....  ..++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~~   83 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN--TTLY   83 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG--TEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC--ceEE
Confidence            6899999999999999999998  5899999998654322   2223456666667999999999998765432  4689


Q ss_pred             eeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC-----eEEeCCCCCCEEEcCCCcE
Q psy14889        211 LVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA-----IAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~-----iiHrDlk~~NiLl~~~~~~  280 (443)
                      +||||+++|+|.+++..     ..+++..++.++.|++.||.|||+.        +     |+||||||+|||++.++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~~~~~~ivH~dl~p~NIl~~~~~~~  155 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR--------SDGGHTVLHRDLKPANVFLDGKQNV  155 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--------C------CCCCCSGGGEEECSSSCE
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc--------cCCCCeeEEeccchhhEEEcCCCCE
Confidence            99999999999999964     2499999999999999999999998        6     9999999999999999999


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||+++.........    ....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..|
T Consensus       156 kl~dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p  215 (279)
T 2w5a_A          156 KLGDFGLARILNHDTSFA----KTFVGTPYYMSPEQMNRM------SYNEKSDIWSLGCLLYELCAL----------MPP  215 (279)
T ss_dssp             EECCCCHHHHC---CHHH----HHHHSCCTTCCHHHHHCC-------CCHHHHHHHHHHHHHHHHHS----------SCS
T ss_pred             EEecCchheeeccccccc----cccCCCccccChHHhccC------CCCchhhHHHHHHHHHHHHHC----------CCC
Confidence            999999997654322110    123688999999999875      667899999999999999999          667


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      |...     ....+...+.. ...+.++     ..++.++.+++.+||+.||++|||+.|+++.+..
T Consensus       216 ~~~~-----~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          216 FTAF-----SQKELAGKIRE-GKFRRIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             SCCS-----SHHHHHHHHHH-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             Cccc-----CHHHHHHHHhh-cccccCC-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            7653     22333333322 2222333     2356789999999999999999999999986543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-42  Score=342.34  Aligned_cols=259  Identities=25%  Similarity=0.359  Sum_probs=200.1

Q ss_pred             HHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---------chHHHHHHHHHHhc-cCCCceeeee
Q psy14889        130 IQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---------SWSRETEIYSTVLL-RHENILGYIG  197 (443)
Q Consensus       130 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---------~~~~e~ei~~~~~l-~H~nIv~l~g  197 (443)
                      ....+.++|.+.+.||+|+||.||+|.+  +|+.||||++......         ......|+..+..+ +||||+++++
T Consensus        88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            3455667899999999999999999998  5899999998654311         11123445555556 8999999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT  276 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~  276 (443)
                      ++...    ...++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.
T Consensus       168 ~~~~~----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------gi~H~Dlkp~NIl~~~  235 (365)
T 2y7j_A          168 SYESS----SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN--------NIVHRDLKPENILLDD  235 (365)
T ss_dssp             EEEBS----SEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECT
T ss_pred             EEeeC----CEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEECC
Confidence            98765    468999999999999999965 5799999999999999999999998        9999999999999999


Q ss_pred             CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       277 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                      ++.+||+|||++..+.....     .....||+.|+|||++.+........++.++|||||||++|||++|         
T Consensus       236 ~~~ikl~DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g---------  301 (365)
T 2y7j_A          236 NMQIRLSDFGFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG---------  301 (365)
T ss_dssp             TCCEEECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHS---------
T ss_pred             CCCEEEEecCcccccCCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHC---------
Confidence            99999999999977654322     2345799999999998754322222577899999999999999999         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ..||...     ........+.........+. |  ...+..+.+++.+||+.||++|||+.++++
T Consensus       302 -~~pf~~~-----~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          302 -SPPFWHR-----RQILMLRMIMEGQYQFSSPE-W--DDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             -SCSSCCS-----SHHHHHHHHHHTCCCCCHHH-H--SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -CCCCCCC-----CHHHHHHHHHhCCCCCCCcc-c--ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             6777553     22223232222222111110 0  224567999999999999999999999986

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=8.1e-43  Score=353.54  Aligned_cols=276  Identities=18%  Similarity=0.224  Sum_probs=184.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccC-Cccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSR-NSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~-~~~~  207 (443)
                      +.++|++.+.||+|+||.||+|.+  +++.||||++......   ......|+..+..++||||+++++++.... ....
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            457899999999999999999987  5899999988653222   122235666666699999999999986543 2224


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|+||||+. |+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~iiHrDlKp~NILl~~~~~~kl~DFG  201 (458)
T 3rp9_A          131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA--------GILHRDLKPANCLVNQDCSVKVCDFG  201 (458)
T ss_dssp             CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcCCCCCChhhEEECCCCCEeecccc
Confidence            6899999985 699999875 4699999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCC-----------------------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        287 LAVSYSQLSNKMD-----------------------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       287 la~~~~~~~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      +|+..........                       ......+||+.|+|||++....     .++.++|||||||++||
T Consensus       202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-----~~~~~~DiwSlG~il~e  276 (458)
T 3rp9_A          202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE-----NYTEAIDVWSIGCIFAE  276 (458)
T ss_dssp             TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCC-----CCCTHHHHHHHHHHHHH
T ss_pred             cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCC-----CCCcHhHHHHHHHHHHH
Confidence            9987653221100                       1123457899999999875431     57789999999999999


Q ss_pred             HHhcccCCCcccc-cCCCCCCCCCCCC----------------ChHHHHhhhhhc-----------------------CC
Q psy14889        344 VCRRTKANGIFEE-YKAPYHDLVPMDP----------------SFDDMRKVICID-----------------------QQ  383 (443)
Q Consensus       344 lltg~~~~~~~~~-~~~P~~~~~~~~~----------------~~~~~~~~~~~~-----------------------~~  383 (443)
                      |++|..++..+.. +..+|.+......                ..+.+..+....                       ..
T Consensus       277 lltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  356 (458)
T 3rp9_A          277 LLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPK  356 (458)
T ss_dssp             HHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCC
T ss_pred             HHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCC
Confidence            9997554332222 2333433210000                001111110000                       00


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        384 RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ....+-.......+.++.+|+.+||..||++|||++|+++
T Consensus       357 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          357 REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            0000000001224678999999999999999999999987

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4e-43  Score=346.17  Aligned_cols=243  Identities=22%  Similarity=0.335  Sum_probs=187.4

Q ss_pred             ccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeeccc
Q psy14889        140 LSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYH  216 (443)
Q Consensus       140 ~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~  216 (443)
                      ..+.||+|+||.||+|..  +|+.||+|++..... .......|+..+..++||||+++++++.+.    ..+++||||+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----~~~~lv~E~~  168 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK----NDIVLVMEYV  168 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEEEEEEECC
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----CEEEEEEeCC
Confidence            367899999999999998  589999999876442 222335667777779999999999998776    4589999999


Q ss_pred             CcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE--cCCCcEEEEecCCccccc
Q psy14889        217 SFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       217 ~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl--~~~~~~kl~DfGla~~~~  292 (443)
                      ++|+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||+  +.++.+||+|||+++.+.
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~  240 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM--------YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK  240 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence            99999998854  4699999999999999999999999        99999999999999  566799999999998765


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ....     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....    ..+
T Consensus       241 ~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~elltg----------~~pf~~~~----~~~  295 (373)
T 2x4f_A          241 PREK-----LKVNFGTPEFLAPEVVNYD------FVSFPTDMWSVGVIAYMLLSG----------LSPFLGDN----DAE  295 (373)
T ss_dssp             TTCB-----CCCCCSSCTTCCHHHHTTC------BCCHHHHHHHHHHHHHHHHHS----------SCTTCCSS----HHH
T ss_pred             Cccc-----cccccCCCcEeChhhccCC------CCCcHHhHHHHHHHHHHHHhC----------CCCCCCCC----HHH
Confidence            4322     1334799999999999765      567899999999999999999          67776531    122


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+..+... ..  .++.. .....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       296 ~~~~i~~~-~~--~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          296 TLNNILAC-RW--DLEDE-EFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHT-CC--CSCSG-GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhc-cC--CCChh-hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            22333322 11  11110 01235678999999999999999999999987

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.2e-42  Score=328.92  Aligned_cols=243  Identities=24%  Similarity=0.419  Sum_probs=193.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|.+  ++..||||++.....    .......|+..+..++||||+++++++.+.    ...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   84 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRV   84 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC----CEE
Confidence            6899999999999999999998  477899999854321    122234566666669999999999998766    457


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~i~H~dlkp~Nili~~~~~~~l~Dfg~~  156 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWS  156 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT--------TCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecccCChHhEEEcCCCCEEEEecccc
Confidence            999999999999999865 6799999999999999999999988        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .......      .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...    
T Consensus       157 ~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~----  210 (279)
T 3fdn_A          157 VHAPSSR------RTDLCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVG----------KPPFEAN----  210 (279)
T ss_dssp             SCC--------------CCCCTTCCHHHHTTC------CCCTTHHHHHHHHHHHHHHHS----------SCTTCCS----
T ss_pred             ccCCccc------ccccCCCCCccCHhHhccC------CCCccchhHhHHHHHHHHHHC----------CCCCCCC----
Confidence            5543321      1334789999999999876      566899999999999999999          6777643    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       ........+..  .....+     ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus       211 -~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          211 -TYQETYKRISR--VEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -SHHHHHHHHHH--TCCCCC-----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -cHHHHHHHHHh--CCCCCC-----CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             22333332222  122222     2355779999999999999999999999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.2e-42  Score=330.71  Aligned_cols=248  Identities=24%  Similarity=0.382  Sum_probs=194.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.|.+.+.||+|+||.||+|.+  ++..||+|++......   ......|+..+..++||||+++++++.........++
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            4688999999999999999998  5788999988654322   2223456777777999999999999876544446789


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC--eEEeCCCCCCEEEc-CCCcEEEEecC
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA--IAHRDIKSKNILVK-TNGTCVIADFG  286 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~--iiHrDlk~~NiLl~-~~~~~kl~DfG  286 (443)
                      +||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +  |+||||||+|||++ .++.+||+|||
T Consensus       106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR--------TPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS--------SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC--------CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence            99999999999999976 6799999999999999999999998        6  99999999999998 78899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++........      ....||+.|+|||++.+       .++.++||||||+++|||++|          ..||.... 
T Consensus       178 ~~~~~~~~~~------~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g----------~~pf~~~~-  233 (290)
T 1t4h_A          178 LATLKRASFA------KAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATS----------EYPYSECQ-  233 (290)
T ss_dssp             GGGGCCTTSB------EESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHS----------SCTTTTCS-
T ss_pred             Cccccccccc------ccccCCcCcCCHHHHhc-------cCCCcchHHHHHHHHHHHHhC----------CCCCCCcC-
Confidence            9965443221      23468999999998864       466899999999999999999          67776531 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ........+.........     +...+.++.+++.+||+.||++|||+.|+++
T Consensus       234 ---~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          234 ---NAAQIYRRVTSGVKPASF-----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---SHHHHHHHHTTTCCCGGG-----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---cHHHHHHHHhccCCcccc-----CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence               223333322221111111     1234467999999999999999999999885

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.4e-43  Score=341.52  Aligned_cols=261  Identities=23%  Similarity=0.331  Sum_probs=200.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE-------CCceeEEEEeeccCc--cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW-------HGENVAVKIFFSRDE--ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~-------~~~~vAvK~~~~~~~--~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ...++|++.+.||+|+||.||+|.+       ++..||||++.....  .......|+..+..++||||+++++++....
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            3457899999999999999999984       366899999854322  2223345666666799999999999988764


Q ss_pred             CcccEEEeeecccCcccHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNRT--------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~~--------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                          ..++||||+++|+|.+++...        .+++..++.++.|++.||.|||+.        +|+||||||+|||++
T Consensus       107 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------~i~H~dlkp~NIli~  174 (327)
T 2yfx_A          107 ----PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--------HFIHRDIAARNCLLT  174 (327)
T ss_dssp             ----SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEES
T ss_pred             ----CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC--------CeecCcCCHhHEEEe
Confidence                368999999999999999643        489999999999999999999999        999999999999998


Q ss_pred             C---CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCC
Q psy14889        276 T---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKAN  351 (443)
Q Consensus       276 ~---~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~  351 (443)
                      .   +..+||+|||++..........  ......||+.|+|||.+.+.      .++.++||||||+++|||+| |    
T Consensus       175 ~~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~ellt~g----  242 (327)
T 2yfx_A          175 CPGPGRVAKIGDFGMARDIYRASYYR--KGGCAMLPVKWMPPEAFMEG------IFTSKTDTWSFGVLLWEIFSLG----  242 (327)
T ss_dssp             CSSTTCCEEECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----
T ss_pred             cCCCcceEEECccccccccccccccc--cCCCcCCCcceeCHhHhcCC------CCCchhhHHHHHHHHHHHHcCC----
Confidence            4   4469999999997654322111  12334678999999999776      67789999999999999998 7    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                            ..||...     ........+... ..+..+     ..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       243 ------~~p~~~~-----~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          243 ------YMPYPSK-----SNQEVLEFVTSG-GRMDPP-----KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             ------CCSSTTC-----CHHHHHHHHHTT-CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ------CCCCCCc-----CHHHHHHHHhcC-CCCCCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence                  6677653     223333333222 222222     33567899999999999999999999999999998775


Q ss_pred             ccc
Q psy14889        432 DMY  434 (443)
Q Consensus       432 ~~~  434 (443)
                      ...
T Consensus       306 ~~~  308 (327)
T 2yfx_A          306 PDV  308 (327)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=8.6e-43  Score=358.55  Aligned_cols=248  Identities=23%  Similarity=0.289  Sum_probs=197.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|.+.+.||+|+||.||+|+.  +|+.||||++....    ........|+..+..++||||+++++++.+.    ..
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~----~~  258 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK----DA  258 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC----CE
Confidence            46799999999999999999998  58999999986532    1122223455555569999999999998776    45


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +++||||+++|+|.+++..   ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+||
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~--------gIvHrDLKPeNILld~~g~vKL~DF  330 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRISDL  330 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeccCCchheEEEeCCCCeEEEec
Confidence            8999999999999999865   3499999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....
T Consensus       331 Gla~~~~~~~~-----~~~~~GT~~Y~APEvl~~~------~~~~~~DiwSLGvilyeLltG----------~~PF~~~~  389 (576)
T 2acx_A          331 GLAVHVPEGQT-----IKGRVGTVGYMAPEVVKNE------RYTFSPDWWALGCLLYEMIAG----------QSPFQQRK  389 (576)
T ss_dssp             TTCEECCTTCC-----EECCCSCGGGCCHHHHTTC------EESSHHHHHHHHHHHHHHHHS----------SCSSSCSS
T ss_pred             ccceecccCcc-----ccccCCCccccCHHHHcCC------CCCccchHHHHHHHHHHHHhC----------CCCCcccc
Confidence            99987654321     1234799999999999876      567899999999999999999          67776542


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                      .. .....+...+...  ...++     ...+.++.+|+.+||+.||++||     ++.||++
T Consensus       390 ~~-~~~~~i~~~i~~~--~~~~p-----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          390 KK-IKREEVERLVKEV--PEEYS-----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             SC-CCHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             cc-hhHHHHHHHhhcc--cccCC-----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            21 1233344333221  22222     33567899999999999999999     7888875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.2e-43  Score=368.11  Aligned_cols=249  Identities=21%  Similarity=0.344  Sum_probs=195.1

Q ss_pred             ceeeeecCeEEEEEEE----CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVW----HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~----~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      +.||+|+||.||+|.+    .++.||||+++......   .....|+..+..++|||||++++++...     .+++|||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~lv~E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-----SWMLVME  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-----SEEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CEEEEEE
Confidence            4799999999999976    35789999986543221   2334566666669999999999998543     3689999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+++.+..
T Consensus       450 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~--------~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          450 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--------NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred             ccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence            9999999999965 5699999999999999999999999        999999999999999999999999999987654


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ..... .......||+.|+|||++.+.      .++.++|||||||++|||++ |          ..||.+.     ...
T Consensus       522 ~~~~~-~~~~~~~~t~~y~APE~~~~~------~~~~~sDvwSlGv~l~ellt~G----------~~Pf~~~-----~~~  579 (635)
T 4fl3_A          522 DENYY-KAQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYG----------QKPYRGM-----KGS  579 (635)
T ss_dssp             --------------CGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTT----------CCSSTTC-----CHH
T ss_pred             Ccccc-ccccCCCCceeeeChhhhcCC------CCCcHHHHHHHHHHHHHHHhCC----------CCCCCCC-----CHH
Confidence            33221 112334577899999999776      67789999999999999998 8          7788664     333


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ++...+.. ..++..+     ..++.++.+||.+||+.||++|||+.+|++.|+++...
T Consensus       580 ~~~~~i~~-~~~~~~p-----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          580 EVTAMLEK-GERMGCP-----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             HHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHc-CCCCCCC-----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            44444432 2333333     34678899999999999999999999999999987653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=5.2e-43  Score=354.90  Aligned_cols=254  Identities=24%  Similarity=0.296  Sum_probs=187.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccC--Cccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSR--NSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~--~~~~  207 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||||++......   ......|+..+..++||||+++++++....  ....
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            47899999999999999999987  5889999998654221   222345666666799999999999987553  2235


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .+++||||+.+ +|.+.+.. .+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~--------~iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence            68999999986 57666643 499999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+......     ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+..  
T Consensus       211 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~ell~g----------~~pF~g~~--  267 (464)
T 3ttj_A          211 ARTAGTSF-----MMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRH----------KILFPGRD--  267 (464)
T ss_dssp             C-----CC-----CC----CCCTTCCHHHHTTC------CCCTTHHHHHHHHHHHHHHHS----------SCSSCCSS--
T ss_pred             eeecCCCc-----ccCCCcccccccCHHHHcCC------CCCHHHHHHHHHHHHHHHHhC----------CCCCCCCC--
Confidence            97665321     12446899999999999876      677899999999999999999          55665421  


Q ss_pred             CCChHHHHhhhhhc-------------------CCCCCCCCCC----CC-----------chhHHHHHHHHHHHhcCCcC
Q psy14889        368 DPSFDDMRKVICID-------------------QQRPVLPNRW----VS-----------DSTLNAMTKVMKECWHQNAN  413 (443)
Q Consensus       368 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~----~~-----------~~~~~~l~~li~~cl~~dP~  413 (443)
                        ..+.+..++...                   ...+......    .+           ...+.++.+|+.+||+.||+
T Consensus       268 --~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  345 (464)
T 3ttj_A          268 --YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA  345 (464)
T ss_dssp             --HHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTT
T ss_pred             --HHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChh
Confidence              111111111100                   0111111000    00           01256799999999999999


Q ss_pred             CCCcHHHHHH
Q psy14889        414 VRLSALRVKK  423 (443)
Q Consensus       414 ~Rps~~evl~  423 (443)
                      +|||+.|+++
T Consensus       346 ~R~ta~e~L~  355 (464)
T 3ttj_A          346 KRISVDDALQ  355 (464)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCCCHHHHhc
Confidence            9999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.3e-43  Score=336.99  Aligned_cols=257  Identities=27%  Similarity=0.428  Sum_probs=192.3

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCCc--ccE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRNS--CTQ  208 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~--~~~  208 (443)
                      ..++|++.+.||+|+||.||+|.+  +|+.||||++............|+..+..+ +||||+++++++......  ...
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            457899999999999999999998  689999999876544444445556555556 899999999998764311  246


Q ss_pred             EEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        209 LWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +++||||+++|+|.+++..   ..+++..+..++.||+.||.|||+.        +|+|+||||+|||++.++.+||+||
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH--------KVIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCcHHHEEEcCCCCEEEeeC
Confidence            8999999999999999964   5699999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |++.........    .....||+.|+|||++...... ...++.++||||||+++|||++|          ..||.+..
T Consensus       174 g~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Di~slG~il~~l~~g----------~~p~~~~~  238 (326)
T 2x7f_A          174 GVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENP-DATYDFKSDLWSLGITAIEMAEG----------APPLCDMH  238 (326)
T ss_dssp             TTTC-----------------CCGGGCCHHHHC---------CCTTHHHHHHHHHHHHHHHS----------SCTTTTSC
T ss_pred             cCceecCcCccc----cccccCCccccChhhhcccccc-CcCCCccchHHHHHHHHHHHHhC----------CCCCCCCc
Confidence            998765432211    1334789999999998732111 01567899999999999999999          66775531


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           .......+... ..+...    ....+..+.+++.+||+.||++|||+.++++
T Consensus       239 -----~~~~~~~~~~~-~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          239 -----PMRALFLIPRN-PAPRLK----SKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             -----HHHHHHHHHHS-CCCCCS----CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -----HHHHHHHhhcC-ccccCC----ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                 12222222211 112211    2335678999999999999999999999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.8e-43  Score=330.76  Aligned_cols=244  Identities=24%  Similarity=0.361  Sum_probs=175.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||||++.....    .......|+..+..++||||+++++++.+.    ...
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   86 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS----NYV   86 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS----SEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC----CeE
Confidence            6799999999999999999997  689999999864321    112334566666779999999999998775    458


Q ss_pred             EeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        210 WLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||+
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nili~~~~~~kl~dfg~  158 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH--------GILHRDLTLSNLLLTRNMNIKIADFGL  158 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSSCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHEEEcCCCCEEEEeecc
Confidence            999999999999999975  5699999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +.........    .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||......
T Consensus       159 ~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~~~  218 (278)
T 3cok_A          159 ATQLKMPHEK----HYTLCGTPNYISPEIATRS------AHGLESDVWSLGCMFYTLLIG----------RPPFDTDTVK  218 (278)
T ss_dssp             CEECC--------------------------------------CTHHHHHHHHHHHHHHS----------SCSSCCCSCC
T ss_pred             eeeccCCCCc----ceeccCCCCcCCcchhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCChhHH
Confidence            9766532221    1234689999999998865      566899999999999999999          5566543211


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ........   .....+     ...+.++.+++.+||+.||++|||+.++++
T Consensus       219 ----~~~~~~~~---~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          219 ----NTLNKVVL---ADYEMP-----SFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ---------CCS---SCCCCC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ----HHHHHHhh---cccCCc-----cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                11111110   111122     235578999999999999999999999886

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4.9e-43  Score=333.19  Aligned_cols=260  Identities=25%  Similarity=0.425  Sum_probs=193.2

Q ss_pred             hccccccceeeeecCeEEEEEEEC---Cc--eeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---GE--NVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~--~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||+|.+.   ++  .||||++....    ........|+..+..++||||+++++++....  
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence            368999999999999999999862   23  58999876432    11223345666667799999999999987653  


Q ss_pred             ccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA  283 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~  283 (443)
                         .++||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+
T Consensus        95 ---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dikp~Nili~~~~~~kl~  163 (291)
T 1u46_A           95 ---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--------RFIHRDLAARNLLLATRDLVKIG  163 (291)
T ss_dssp             ---CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEEEETTEEEEC
T ss_pred             ---ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCchheEEEcCCCCEEEc
Confidence               5899999999999999964  5699999999999999999999999        99999999999999999999999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYH  362 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~  362 (443)
                      |||++.......... .......+|..|+|||.+.+.      .++.++||||||+++|||++ |          ..||.
T Consensus       164 Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g----------~~p~~  226 (291)
T 1u46_A          164 DFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYG----------QEPWI  226 (291)
T ss_dssp             CCTTCEECCC-CCEE-EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTS----------CCTTT
T ss_pred             cccccccccccccch-hhhccCCCCceeeCchhhcCC------CCCchhhHHHHHHHHHHHHhCC----------CCCcc
Confidence            999998765432211 112234678899999999765      45679999999999999999 8          67776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      ..     ........+.........+     ..++..+.+++.+||+.||++|||+.++++.|+++......
T Consensus       227 ~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  288 (291)
T 1u46_A          227 GL-----NGSQILHKIDKEGERLPRP-----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR  288 (291)
T ss_dssp             TC-----CHHHHHHHHHTSCCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred             cC-----CHHHHHHHHHccCCCCCCC-----cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence            53     2233333332222222222     34667899999999999999999999999999998766543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.5e-42  Score=328.85  Aligned_cols=241  Identities=23%  Similarity=0.363  Sum_probs=189.8

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhc-cCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|++.+.||+|+||.||+|..  +++.||||++.....   .......|+..+..+ +||||+++++++.+.    .
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----~   84 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----D   84 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET----T
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC----C
Confidence            447899999999999999999998  589999999875422   222334566666556 999999999998766    4


Q ss_pred             EEEeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-----
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-----  277 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-----  277 (443)
                      ..++||||+++|+|.+++..     ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.+     
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dikp~NIl~~~~~~~~~  156 (289)
T 1x8b_A           85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM--------SLVHMDIKPSNIFISRTSIPNA  156 (289)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEC-------
T ss_pred             eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC--------CEeecCCCHHHEEEcCCCCCcc
Confidence            68999999999999999964     5689999999999999999999999        99999999999999844     


Q ss_pred             --------------CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        278 --------------GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       278 --------------~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                                    ..+||+|||++......        ....||+.|+|||.+.+..     .++.++||||||+++||
T Consensus       157 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------~~~~gt~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~  223 (289)
T 1x8b_A          157 ASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------QVEEGDSRFLANEVLQENY-----THLPKADIFALALTVVC  223 (289)
T ss_dssp             -------------CCCEEECCCTTCEETTCS--------CCCCCCGGGCCHHHHTTCC-----TTHHHHHHHHHHHHHHH
T ss_pred             cccccccccccCCceEEEEcccccccccCCc--------cccCCCccccChhHhcCCC-----CCCchhhHHHHHHHHHH
Confidence                          47999999999766532        2235899999999997642     34479999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |++|          ..|+...       .......  ....+.++     ..++..+.+++.+||+.||++|||+.|+++
T Consensus       224 l~~~----------~~~~~~~-------~~~~~~~--~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          224 AAGA----------EPLPRNG-------DQWHEIR--QGRLPRIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HTTC----------CCCCSSS-------HHHHHHH--TTCCCCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhcC----------CCCCcch-------hHHHHHH--cCCCCCCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            9998          3333221       1222221  12223333     335678999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-43  Score=343.47  Aligned_cols=250  Identities=24%  Similarity=0.373  Sum_probs=194.5

Q ss_pred             ccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccC-------ccchHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRD-------EASWSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~-------~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      ++|++.+.||+|+||.||+|+.     +++.||||++....       ......|.+++..  + +||||+++++++...
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH--IRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHH--HHTCTTBCCEEEEEEET
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHH--ccCCCceeEEEEEEeeC
Confidence            6899999999999999999987     58899999885422       1223345555444  6 699999999998766


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                          ..+++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+|
T Consensus       132 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~~k  199 (355)
T 1vzo_A          132 ----TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL--------GIIYRDIKLENILLDSNGHVV  199 (355)
T ss_dssp             ----TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEE
T ss_pred             ----ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEECCCCcEE
Confidence                458999999999999999964 6799999999999999999999998        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+++.+.......   .....||+.|+|||++.+...    .++.++|||||||++|||++|          ..||
T Consensus       200 l~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~----~~~~~~DvwslG~il~ell~g----------~~pf  262 (355)
T 1vzo_A          200 LTDFGLSKEFVADETER---AYDFCGTIEYMAPDIVRGGDS----GHDKAVDWWSLGVLMYELLTG----------ASPF  262 (355)
T ss_dssp             ESCSSEEEECCGGGGGG---GCGGGSCCTTCCHHHHTTCC-------CTHHHHHHHHHHHHHHHHS----------SCTT
T ss_pred             EeeCCCCeecccCCCCc---ccCcccCcCccChhhhcCCCC----CCCchhhHHHHHHHHHHHHHC----------CCCC
Confidence            99999997654322211   234579999999999985321    456899999999999999999          6677


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKKT  424 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~  424 (443)
                      ...... .....+...+..  ..+..+     ..++..+.+|+.+||+.||++||     |+.|+++.
T Consensus       263 ~~~~~~-~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          263 TVDGEK-NSQAEISRRILK--SEPPYP-----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             SCTTSC-CCHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccCCcc-chHHHHHHHHhc--cCCCCC-----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            543221 122333332221  122233     33567899999999999999999     99999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.4e-42  Score=355.86  Aligned_cols=248  Identities=23%  Similarity=0.297  Sum_probs=196.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|.+.+.||+|+||.||+|+.  +|+.||+|++.....    .......|+..+..++||||+++++++.+.    ..+
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~----~~l  260 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK----TDL  260 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC----CEE
Confidence            6799999999999999999998  589999999865321    112223455555569999999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||+++|+|.+++..     ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~--------gIvHrDLKP~NILl~~~g~vkL~D  332 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISD  332 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc--------CCcccCCChHHEEEeCCCCEEEee
Confidence            999999999999999864     3599999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+......    .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...
T Consensus       333 FGla~~~~~~~~~----~~~~~GT~~Y~APE~l~~~------~~~~~~DiwSlGvilyelltG----------~~PF~~~  392 (543)
T 3c4z_A          333 LGLAVELKAGQTK----TKGYAGTPGFMAPELLLGE------EYDFSVDYFALGVTLYEMIAA----------RGPFRAR  392 (543)
T ss_dssp             CTTCEECCTTCCC----BCCCCSCTTTSCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCT
T ss_pred             cceeeeccCCCcc----cccccCCccccChhhhcCC------CCChHHhcCcchHHHHHHHhC----------CCCCCCC
Confidence            9999876543221    2345899999999999876      677899999999999999999          6777654


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH-----HHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA-----LRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~  423 (443)
                      ... .....+...+...  ....|     ...+..+.+|+.+||+.||++||++     .+|++
T Consensus       393 ~~~-~~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          393 GEK-VENKELKQRVLEQ--AVTYP-----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             TCC-CCHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             ccc-hhHHHHHHHHhhc--ccCCC-----cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            221 1233343333221  22233     3356789999999999999999964     66654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=338.94  Aligned_cols=255  Identities=20%  Similarity=0.342  Sum_probs=188.3

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccc---hHHHHHHHHHHhccC--CCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRH--ENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H--~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|++.+.||+|+||.||++.. +++.||||++.......   .....|+..+..++|  |||+++++++.+.    ..
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~----~~   83 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----QY   83 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC----CE
Confidence            36799999999999999999988 67889999986543221   122345555555766  9999999998876    46


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +++||| +.+|+|.+++.. ..+++.++..++.||+.||.|||+.        +|+||||||+|||++ ++.+||+|||+
T Consensus        84 ~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~iiHrDikp~NIll~-~~~~kl~DFG~  153 (343)
T 3dbq_A           84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH--------GIVHSDLKPANFLIV-DGMLKLIDFGI  153 (343)
T ss_dssp             EEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred             EEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCcceEEEE-CCcEEEeeccc
Confidence            899999 467899999965 5799999999999999999999999        999999999999997 67899999999


Q ss_pred             cccccccCCcCCCCCCCcccccCccccccccccccc-----CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-----DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-----~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      ++.........  ......||+.|+|||++.+....     ....++.++|||||||++|||++|          ..||.
T Consensus       154 a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g----------~~pf~  221 (343)
T 3dbq_A          154 ANQMQPDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG----------KTPFQ  221 (343)
T ss_dssp             SCCC--------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHS----------SCTTT
T ss_pred             ccccCcccccc--cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhC----------CCcch
Confidence            98765432211  12345799999999998652110     001567899999999999999999          67776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ....   ....+...+ ........+     ...+..+.+|+.+||+.||.+|||+.|+++.
T Consensus       222 ~~~~---~~~~~~~~~-~~~~~~~~~-----~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          222 QIIN---QISKLHAII-DPNHEIEFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             TCCS---HHHHHHHHH-CTTSCCCCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhh---HHHHHHHHh-cCCcccCCc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            5321   112222222 112222222     2245679999999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.1e-42  Score=327.63  Aligned_cols=257  Identities=19%  Similarity=0.275  Sum_probs=198.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-------cchHHHHHHHHHHhccCCCceeeeeeccccCCc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-------ASWSRETEIYSTVLLRHENILGYIGSDMTSRNS  205 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~  205 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||+|++.....       .....+.|+..+..++||||+++++++.+.   
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---   80 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK---   80 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC---
Confidence            46799999999999999999998  588999998865421       122334566666679999999999998775   


Q ss_pred             ccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----cE
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----TC  280 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----~~  280 (443)
                       ...++||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++    .+
T Consensus        81 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~~~~~  151 (283)
T 3bhy_A           81 -TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK--------RIAHFDLKPENIMLLDKNVPNPRI  151 (283)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEESCSSSSSCCE
T ss_pred             -CeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCCCCChHHEEEecCCCCCCce
Confidence             457999999999999999964 6799999999999999999999998        999999999999998877    89


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||++........     .....||+.|+|||++.+.      .++.++||||||+++|||++|          ..|
T Consensus       152 kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p  210 (283)
T 3bhy_A          152 KLIDFGIAHKIEAGNE-----FKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG----------ASP  210 (283)
T ss_dssp             EECCCTTCEECC-------------CCCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCT
T ss_pred             EEEecccceeccCCCc-----ccccCCCcCccCcceecCC------CCCcchhhhhHHHHHHHHHHC----------CCC
Confidence            9999999976643221     1334689999999999765      667899999999999999999          667


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--HHHHHhhcc
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK--TLIKLACAD  432 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~l~~~~  432 (443)
                      |...     ........+...  ....+.. .....+..+.+++.+||+.||++|||+.++++  .++.+....
T Consensus       211 ~~~~-----~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          211 FLGE-----TKQETLTNISAV--NYDFDEE-YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             TCCS-----SHHHHHHHHHTT--CCCCCHH-HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             CCCc-----chHHHHHHhHhc--ccCCcch-hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence            7653     222222222111  1111110 01234567999999999999999999999997  566665544

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.2e-43  Score=347.90  Aligned_cols=254  Identities=13%  Similarity=0.091  Sum_probs=174.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc------hHHHHH-HHHHHhccCCCceeeeeec-------
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS------WSRETE-IYSTVLLRHENILGYIGSD-------  199 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~------~~~e~e-i~~~~~l~H~nIv~l~g~~-------  199 (443)
                      .+|.+.+.||+|+||.||+|.+  +|+.||||++.......      ...|.+ +..+.. +||||++++..+       
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            5699999999999999999997  58899999987654311      122322 223333 699988855332       


Q ss_pred             cccCC-------------cccEEEeeecccCcccHHHHhcc--cCCCHHHH------HHHHHHHHHHHHHHHHchhcCCC
Q psy14889        200 MTSRN-------------SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQM------MKICLSIVNGLVHLHTEIFGTQG  258 (443)
Q Consensus       200 ~~~~~-------------~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~------~~i~~qia~gL~yLH~~~~~~~~  258 (443)
                      .....             ....+++||||++ |+|.+++..  ..+.+..+      ..++.||+.||+|||++      
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~------  213 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK------  213 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC------
Confidence            21111             0134799999999 899999974  35666666      78889999999999999      


Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHH
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG  338 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~G  338 (443)
                        +|+||||||+|||++.++.+||+|||+++.......       ...+|+.|+|||++.+...    .++.++||||||
T Consensus       214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------~~~~t~~y~aPE~~~~~~~----~~~~~~DiwSlG  280 (371)
T 3q60_A          214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------ASSVPVTYAPREFLNASTA----TFTHALNAWQLG  280 (371)
T ss_dssp             --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------GGGSCGGGCCHHHHTCSEE----ECCHHHHHHHHH
T ss_pred             --CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-------CccCCcCCcChhhccCCCC----CcCccccHHHHH
Confidence              999999999999999999999999999986643221       2357799999999976211    567899999999


Q ss_pred             HHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       339 vvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                      |++|||++|          ..||....+.....................+.   ...++..+.+|+.+||+.||++|||+
T Consensus       281 ~il~elltg----------~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~  347 (371)
T 3q60_A          281 LSIYRVWCL----------FLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGS---CTPLPDFVKTLIGRFLNFDRRRRLLP  347 (371)
T ss_dssp             HHHHHHHHS----------SCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTT---SSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred             HHHHHHHhC----------CCCCCCcCcccccchhhhhhhhccccccchhh---ccCCCHHHHHHHHHHcCCChhhCCCH
Confidence            999999999          56665542211100000000000011111111   13467889999999999999999999


Q ss_pred             HHHHH
Q psy14889        419 LRVKK  423 (443)
Q Consensus       419 ~evl~  423 (443)
                      .++++
T Consensus       348 ~e~l~  352 (371)
T 3q60_A          348 LEAME  352 (371)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            99975

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.4e-42  Score=330.84  Aligned_cols=253  Identities=22%  Similarity=0.291  Sum_probs=189.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+  +|+.||||++.......   .....|+..+..++||||+++++++...    ...+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~   78 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK----RRLH   78 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC----CeEE
Confidence            6899999999999999999998  48999999886543322   2224566667779999999999998766    4579


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++++|.+++. ...+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++.
T Consensus        79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  150 (311)
T 4agu_A           79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH--------NCIHRDVKPENILITKHSVIKLCDFGFAR  150 (311)
T ss_dssp             EEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC--------CCcCCCCChhhEEEcCCCCEEEeeCCCch
Confidence            9999999999999886 45699999999999999999999999        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....||..|+|||++.+..     .++.++||||||+++|||++|          ..||.....   
T Consensus       151 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~g----------~~p~~~~~~---  208 (311)
T 4agu_A          151 LLTGPSDY----YDDEVATRWYRSPELLVGDT-----QYGPPVDVWAIGCVFAELLSG----------VPLWPGKSD---  208 (311)
T ss_dssp             ECC----------------GGGCCHHHHHTCS-----CCCTHHHHHHHHHHHHHHHHS----------SCSCCCSSH---
T ss_pred             hccCcccc----cCCCcCCccccChHHHhcCC-----CCCcchhhHHHHHHHHHHHhC----------CCCCCCCCH---
Confidence            76533222    13447899999999987631     567899999999999999999          666654311   


Q ss_pred             ChHHHHhhhhh------------------cCCCCCCCCCCC-----CchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICI------------------DQQRPVLPNRWV-----SDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~------------------~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .+........                  .......+....     ....+..+.+|+.+||+.||++|||+.|+++
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          209 -VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             -HHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             -HHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             1111111000                  000000010000     0235567999999999999999999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.4e-42  Score=327.41  Aligned_cols=251  Identities=25%  Similarity=0.373  Sum_probs=196.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++......  ......|+..+..++||||+++++++.+.    ...+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   81 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG----NIQY   81 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET----TEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC----CEEE
Confidence            46899999999999999999998  5889999998654322  22334566666679999999999998765    4579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++.
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  153 (276)
T 2yex_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--------GITHRDIKPENLLLDERDNLKISDFGLAT  153 (276)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC--------CeeccCCChHHEEEccCCCEEEeeCCCcc
Confidence            99999999999999975 4799999999999999999999998        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .........  ......||+.|+|||.+.+..     ..+.++||||||+++|||++|          ..||.....   
T Consensus       154 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~g----------~~p~~~~~~---  213 (276)
T 2yex_A          154 VFRYNNRER--LLNKMCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAG----------ELPWDQPSD---  213 (276)
T ss_dssp             ECEETTEEC--CBCCCCSCGGGCCGGGGTCSS-----BCHHHHHHHHHHHHHHHHHHS----------SCCCSCSCT---
T ss_pred             ccCCCcchh--cccCCccccCccChHHHhcCC-----CCCCcchHHHHHHHHHHHHhC----------CCCCCCCch---
Confidence            654322111  123457899999999997652     124689999999999999999          667765322   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...........   ....+.   ....+..+.+++.+||+.||++|||+.|+++
T Consensus       214 ~~~~~~~~~~~---~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          214 SCQEYSDWKEK---KTYLNP---WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TSHHHHHHHTT---CTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHhhhc---ccccCc---hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            11222222211   111111   1345678999999999999999999999876

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2.2e-42  Score=353.60  Aligned_cols=249  Identities=23%  Similarity=0.372  Sum_probs=194.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC---ccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD---EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~---~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+.++|++.+.||+|+||.||+|..  ++..||||++....   ........|+..+..++||||+++++++.+.    .
T Consensus        34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~  109 (494)
T 3lij_A           34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK----R  109 (494)
T ss_dssp             CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS----S
T ss_pred             chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----C
Confidence            3456899999999999999999998  58899999986532   1223334566677779999999999999776    4


Q ss_pred             EEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---CcEEEE
Q psy14889        208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIA  283 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~~kl~  283 (443)
                      .+++||||+++|+|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.+   +.+||+
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~~~kl~  181 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH--------NIVHRDLKPENLLLESKEKDALIKIV  181 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCChhhEEEeCCCCCCcEEEE
Confidence            5899999999999998875 46799999999999999999999999        99999999999999764   459999


Q ss_pred             ecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       284 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      |||+++.......     .....||+.|+|||++.+       .++.++|||||||++|||++|          ..||..
T Consensus       182 DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g----------~~pf~~  239 (494)
T 3lij_A          182 DFGLSAVFENQKK-----MKERLGTAYYIAPEVLRK-------KYDEKCDVWSIGVILFILLAG----------YPPFGG  239 (494)
T ss_dssp             CCTTCEECBTTBC-----BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHS----------SCSSCC
T ss_pred             ECCCCeECCCCcc-----ccccCCCcCeeCHHHHcc-------cCCCchhHHHHHHHHHHHHhC----------CCCCCC
Confidence            9999987654322     234579999999999863       566899999999999999999          777765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .     ....+...+.........+ .|  ..++..+.+|+.+||+.||.+|||+.|+++
T Consensus       240 ~-----~~~~~~~~i~~~~~~~~~~-~~--~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          240 Q-----TDQEILRKVEKGKYTFDSP-EW--KNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             S-----SHHHHHHHHHHTCCCCCSG-GG--TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C-----CHHHHHHHHHhCCCCCCch-hc--ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            3     2333433333322222111 11  235678999999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.5e-42  Score=335.63  Aligned_cols=247  Identities=19%  Similarity=0.264  Sum_probs=198.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|.+.+.||+|+||.||++.+  +++.||+|++.....    .......|+..+..++||||+++++++.+.    .
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~  114 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN----D  114 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS----S
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----C
Confidence            347899999999999999999998  478999999865421    122234566677779999999999998776    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++||||+.+++|.+++.. ..+++.++..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~NIl~~~~~~~kl~Dfg  186 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--------RVIHRDLKLGNLFLNEDLEVKIGDFG  186 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEecCCCchhEEEcCCCCEEEeecc
Confidence            58999999999999999865 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.........    .....||..|+|||++.+.      .++.++||||||+++|||++|          ..||...  
T Consensus       187 ~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~~~--  244 (335)
T 2owb_A          187 LATKVEYDGER----KKVLCGTPNYIAPEVLSKK------GHSFEVDVWSIGCIMYTLLVG----------KPPFETS--  244 (335)
T ss_dssp             TCEECCSTTCC----BCCCCSCCSSCCHHHHHTS------CBCTHHHHHHHHHHHHHHHHS----------SCTTCCS--
T ss_pred             CceecccCccc----ccccCCCccccCHHHhccC------CCCchhhHHHHHHHHHHHHHC----------cCCCCCC--
Confidence            99776532221    2345789999999999775      567899999999999999999          6677543  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                         ........+..  ....++     ..++..+.+|+.+||+.||++|||+.|+++.
T Consensus       245 ---~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          245 ---CLKETYLRIKK--NEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             ---SHHHHHHHHHH--TCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CHHHHHHHHhc--CCCCCC-----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               22222222221  122222     2355679999999999999999999999873

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-42  Score=341.50  Aligned_cols=255  Identities=21%  Similarity=0.323  Sum_probs=190.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||||++.......   .....|+..+..++||||+++++++.....  ..
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            357899999999999999999998  58999999985432221   222456666677999999999999876532  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+ +++|.++++...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA--------GIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCcCHHHEEEcCCCCEEEEeee
Confidence            3469999999 78999999888899999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.....       .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+.. 
T Consensus       174 ~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~pf~~~~-  230 (367)
T 1cm8_A          174 LARQADSE-------MTGYVVTRWYRAPEVILNWM-----RYTQTVDIWSVGCIMAEMITG----------KTLFKGSD-  230 (367)
T ss_dssp             TCEECCSS-------CCSSCSCGGGCCTHHHHTTT-----CCCTTHHHHHHHHHHHHHHHS----------SCSSCCSS-
T ss_pred             cccccccc-------cCcCcCCCCcCCHHHHhCCC-----CCChhhhHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            99765432       23457899999999987631     567899999999999999999          55665421 


Q ss_pred             CCCChHHHHhhhhhcCC--------------------CCCCCC-CC--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQ--------------------RPVLPN-RW--VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ..+.+..+......                    .+..+. .+  .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       231 ---~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          231 ---HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             ---HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---HHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence               11111111111000                    000000 00  11235678999999999999999999999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=7.6e-43  Score=338.46  Aligned_cols=255  Identities=20%  Similarity=0.269  Sum_probs=186.0

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ...++|++.+.||+|+||.||+|..  +++.||||++.......   .....|+..+..++||||+++++++.+.    .
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~  106 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN----H  106 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET----T
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC----C
Confidence            3347899999999999999999987  68899999986543222   1223566667779999999999998776    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc-----CCCcEE
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK-----TNGTCV  281 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~-----~~~~~k  281 (443)
                      .+++||||++ |+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++     .++.+|
T Consensus       107 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~~~~k  177 (329)
T 3gbz_A          107 RLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR--------RCLHRDLKPQNLLLSVSDASETPVLK  177 (329)
T ss_dssp             EEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEEC-----CCEEE
T ss_pred             EEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEECCCCCHHHEEEecCCCCccceEE
Confidence            5899999998 599999865 5799999999999999999999999        999999999999994     455699


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+++........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||
T Consensus       178 l~Dfg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~pf  238 (329)
T 3gbz_A          178 IGDFGLARAFGIPIRQ----FTHEIITLWYRPPEILLGSR-----HYSTSVDIWSIACIWAEMLMK----------TPLF  238 (329)
T ss_dssp             ECCTTHHHHHC---------------CCTTCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHS----------SCSS
T ss_pred             ECcCCCccccCCcccc----cCCCcCCccccCHHHhcCCC-----CCCcHHHHHHHHHHHHHHHHC----------CCCc
Confidence            9999999766532221    23447899999999997642     467899999999999999999          5566


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCC---------------CCCCCCC-------CCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQR---------------PVLPNRW-------VSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      ....    ..+.+..........               ...+...       .....+.++.+|+.+||+.||++|||+.
T Consensus       239 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  314 (329)
T 3gbz_A          239 PGDS----EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK  314 (329)
T ss_dssp             CCSS----HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCC----HHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHH
Confidence            5421    112222222111000               0000000       0011457889999999999999999999


Q ss_pred             HHHH
Q psy14889        420 RVKK  423 (443)
Q Consensus       420 evl~  423 (443)
                      |+++
T Consensus       315 e~l~  318 (329)
T 3gbz_A          315 NALE  318 (329)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            9875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=336.63  Aligned_cols=263  Identities=25%  Similarity=0.391  Sum_probs=182.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhcc-CCCceeeeeecccc----CCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLR-HENILGYIGSDMTS----RNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~-H~nIv~l~g~~~~~----~~~~  206 (443)
                      ..+|++.+.||+|+||.||+|++  +++.||||++....... .....|+..+..+. ||||+++++++...    ....
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            36899999999999999999998  68999999886544322 22345555565575 99999999998422    1222


Q ss_pred             cEEEeeecccCcccHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCC--eEEeCCCCCCEEEcCCCcE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPA--IAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~--iiHrDlk~~NiLl~~~~~~  280 (443)
                      ..+++||||+. |+|.+++..    ..+++..++.++.||+.||.|||+.        +  |+||||||+|||++.++.+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~~~ivH~Dikp~NIl~~~~~~~  177 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ--------KPPIIHRDLKVENLLLSNQGTI  177 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS--------SSCCBCCCCCGGGCEECTTSCE
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CCCEEEccCCcccEEECCCCCE
Confidence            56899999996 799998853    5699999999999999999999998        7  9999999999999999999


Q ss_pred             EEEecCCcccccccCCcCC--------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMD--------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG  352 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~  352 (443)
                      ||+|||+++..........        .......||+.|+|||++.....   ..++.++||||||+++|||++|     
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~---~~~~~~~Dv~slG~il~el~~g-----  249 (337)
T 3ll6_A          178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN---FPIGEKQDIWALGCILYLLCFR-----  249 (337)
T ss_dssp             EBCCCTTCBCCSSCC-------------------------------CCTT---SCSSHHHHHHHHHHHHHHHHHS-----
T ss_pred             EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcccc---CCCChHHhHHHHHHHHHHHHhC-----
Confidence            9999999987654322110        01123468999999999842211   1667899999999999999999     


Q ss_pred             cccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ..||......        .... .......+     ...+..+.+|+.+||+.||++|||+.|+++.|+++....
T Consensus       250 -----~~p~~~~~~~--------~~~~-~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          250 -----QHPFEDGAKL--------RIVN-GKYSIPPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             -----SCCC---------------------CCCCTT-----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             -----CCCCcchhHH--------Hhhc-CcccCCcc-----cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                 6666543111        1110 01111111     223446889999999999999999999999999998754


Q ss_pred             c
Q psy14889        433 M  433 (443)
Q Consensus       433 ~  433 (443)
                      .
T Consensus       311 ~  311 (337)
T 3ll6_A          311 N  311 (337)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.5e-42  Score=337.72  Aligned_cols=260  Identities=23%  Similarity=0.311  Sum_probs=192.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCc----c
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNS----C  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~----~  206 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||||++......   ......|+..+..++||||+++++++......    .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            6899999999999999999998  5889999988544322   22334566666669999999999998764321    2


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..+++||||+++ +|.+.+..  ..+++.++..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIl~~~~~~~kl~D  167 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--------KILHRDMKAANVLITRDGVLKLAD  167 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECC
T ss_pred             ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeCCCCCHHHEEEcCCCCEEEcc
Confidence            468999999985 78777754  5799999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+...............||+.|+|||++.+..     .++.++|||||||++|||++|          ..||...
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~pf~~~  232 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER-----DYGPPIDLWGAGCIMAEMWTR----------SPIMQGN  232 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCC-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCS
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCC-----CCCcHhHHHHHHHHHHHHHhC----------CCCCCCC
Confidence            9999876643333333334567899999999987642     456899999999999999999          5555542


Q ss_pred             CCCCCChHHHHhhhhhcCCC-CCCCCCC------------------CCc-----hhHHHHHHHHHHHhcCCcCCCCcHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQR-PVLPNRW------------------VSD-----STLNAMTKVMKECWHQNANVRLSALR  420 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~~~-----~~~~~l~~li~~cl~~dP~~Rps~~e  420 (443)
                      .    ............... +......                  ...     ..+..+.+|+.+||+.||++|||+.|
T Consensus       233 ~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  308 (351)
T 3mi9_A          233 T----EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD  308 (351)
T ss_dssp             S----HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             C----hHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHH
Confidence            1    111111111110000 0000000                  000     01356889999999999999999999


Q ss_pred             HHH
Q psy14889        421 VKK  423 (443)
Q Consensus       421 vl~  423 (443)
                      +++
T Consensus       309 ~l~  311 (351)
T 3mi9_A          309 ALN  311 (351)
T ss_dssp             HHT
T ss_pred             HhC
Confidence            987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=3.1e-42  Score=330.25  Aligned_cols=248  Identities=22%  Similarity=0.314  Sum_probs=196.0

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.++|.+.+.||+|+||.||+++.  +|+.||+|++..... .....+.|+..+..++||||+++++++.+.    ...+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   82 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST----THYY   82 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS----SEEE
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC----CEEE
Confidence            457899999999999999999998  589999999875432 222334566666679999999999998765    4589


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEEEecC
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIADFG  286 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl~DfG  286 (443)
                      +||||+++|+|.+++. ...+++..+..++.|++.||.|||+.        +|+||||||+||++   +.++.+||+|||
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dikp~NIl~~~~~~~~~~kl~Dfg  154 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN--------GIVHRDLKPENLLYLTPEENSKIMITDFG  154 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred             EEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCHHHEEEecCCCCCCEEEccCC
Confidence            9999999999999885 46789999999999999999999999        99999999999999   778899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.......      .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...  
T Consensus       155 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~~~--  210 (304)
T 2jam_A          155 LSKMEQNGI------MSTACGTPGYVAPEVLAQK------PYSKAVDCWSIGVITYILLCG----------YPPFYEE--  210 (304)
T ss_dssp             TTCCCCCBT------THHHHSCCCBCCTTTBSSC------SCCHHHHHHHHHHHHHHHHHS----------SCTTTTS--
T ss_pred             cceecCCCc------cccccCCCCccChHHhccC------CCCchhhHHHHHHHHHHHHHC----------CCCCCCC--
Confidence            986543211      1234689999999999875      667899999999999999999          6777653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ........+......  .+.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus       211 ---~~~~~~~~i~~~~~~--~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          211 ---TESKLFEKIKEGYYE--FESP-FWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             ---CHHHHHHHHHHCCCC--CCTT-TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ---CHHHHHHHHHcCCCC--CCcc-ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               223333333222211  1111 11346678999999999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4e-42  Score=327.79  Aligned_cols=247  Identities=19%  Similarity=0.267  Sum_probs=198.3

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|.+.+.||+|+||.||++..  +++.||+|++......    ......|+..+..++||||+++++++.+.    .
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~   88 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN----D   88 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS----S
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC----C
Confidence            347899999999999999999998  4789999988654321    22234566677779999999999998765    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..++||||+++++|.+++.. ..+++.++..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~kl~dfg  160 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--------RVIHRDLKLGNLFLNEDLEVKIGDFG  160 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCChHhEEEcCCCCEEEEecc
Confidence            58999999999999999865 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      ++.........    .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...  
T Consensus       161 ~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~~g----------~~p~~~~--  218 (294)
T 2rku_A          161 LATKVEYDGER----KKVLCGTPNYIAPEVLSKK------GHSFEVDVWSIGCIMYTLLVG----------KPPFETS--  218 (294)
T ss_dssp             TCEECCSTTCC----BCCCCSCCSSCCHHHHTTS------CBCTHHHHHHHHHHHHHHHHS----------SCTTCCS--
T ss_pred             CceecccCccc----cccccCCCCcCCcchhccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC--
Confidence            99766432221    2335789999999999765      567899999999999999999          6677553  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                         ...+....+.  .....++     ...+..+.+++.+||+.||++|||+.|+++.
T Consensus       219 ---~~~~~~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          219 ---CLKETYLRIK--KNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             ---SHHHHHHHHH--TTCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CHHHHHHHHh--hccCCCc-----cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence               2222222221  1222233     2355679999999999999999999999874

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=8.9e-43  Score=335.65  Aligned_cols=263  Identities=21%  Similarity=0.268  Sum_probs=188.3

Q ss_pred             hcccccc-ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHh-ccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLS-ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~-~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.|.+. +.||+|+||.||+|..  +++.||||++...... ......|+..+.. ++||||+++++++.+.    ..+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~----~~~   86 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE----DRF   86 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET----TEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC----CEE
Confidence            4678885 7899999999999987  6899999998654332 2233445555554 5799999999998776    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc---EEEEec
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADF  285 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~---~kl~Df  285 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++.   +||+||
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dlkp~Nil~~~~~~~~~~kl~Df  158 (316)
T 2ac3_A           87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--------GIAHRDLKPENILCEHPNQVSPVKICDF  158 (316)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred             EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CceeCCCCHHHEEEccCCCcCceEEEEc
Confidence            999999999999999964 6799999999999999999999999        9999999999999998775   999999


Q ss_pred             CCcccccccCCcC---CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        286 GLAVSYSQLSNKM---DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       286 Gla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      |++..........   ........||+.|+|||++.+..... ..++.++|||||||++|||++|          ..||.
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~DiwslG~il~~l~~g----------~~pf~  227 (316)
T 2ac3_A          159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA-SIYDKRCDLWSLGVILYILLSG----------YPPFV  227 (316)
T ss_dssp             TCCC-------------------CCSGGGCCHHHHHHTSHHH-HHHTTTHHHHHHHHHHHHHHHS----------SCSCC
T ss_pred             cCccccccCCccccccccccccccCCcCccChHHhhcccccc-cCCCcccccHhHHHHHHHHHHC----------CCCCc
Confidence            9987654321111   11112346999999999987521000 0456799999999999999999          55554


Q ss_pred             CCCCCCCC----------hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPS----------FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .....+..          ...+...+...  ...++.. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          228 GRCGSDCGWDRGEACPACQNMLFESIQEG--KYEFPDK-DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CCCCSCSCC----CCHHHHHHHHHHHHHC--CCCCCHH-HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccccccccccccchhHHHHHHHHHhcc--CcccCch-hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            43221100          11122222211  1122210 00124568999999999999999999999987

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.5e-42  Score=354.08  Aligned_cols=249  Identities=23%  Similarity=0.318  Sum_probs=195.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--------------chHHHHHHHHHHhccCCCceeee
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--------------SWSRETEIYSTVLLRHENILGYI  196 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--------------~~~~e~ei~~~~~l~H~nIv~l~  196 (443)
                      .+.++|.+.+.||+|+||.||+|..  +++.||||++......              ......|+..+..++||||++++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            3557899999999999999999998  5789999998653211              12234677777779999999999


Q ss_pred             eeccccCCcccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       197 g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                      +++.+.    ..+++||||+++|+|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++
T Consensus       113 ~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          113 DVFEDK----KYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH--------NIVHRDIKPENILLE  180 (504)
T ss_dssp             EEEECS----SEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEES
T ss_pred             EEEEcC----CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeEeCCCcHHHEEEe
Confidence            999776    46899999999999999885 46799999999999999999999999        999999999999998


Q ss_pred             CCC---cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC
Q psy14889        276 TNG---TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG  352 (443)
Q Consensus       276 ~~~---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~  352 (443)
                      .++   .+||+|||++........     .....||+.|+|||++.+       .++.++|||||||++|||++|     
T Consensus       181 ~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g-----  243 (504)
T 3q5i_A          181 NKNSLLNIKIVDFGLSSFFSKDYK-----LRDRLGTAYYIAPEVLKK-------KYNEKCDVWSCGVIMYILLCG-----  243 (504)
T ss_dssp             STTCCSSEEECCCTTCEECCTTSC-----BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHS-----
T ss_pred             cCCCCccEEEEECCCCEEcCCCCc-----cccccCCcCCCCHHHhcc-------CCCchHHHHHHHHHHHHHHhC-----
Confidence            876   699999999987654322     234579999999999864       566899999999999999999     


Q ss_pred             cccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           ..||.+.     ....+...+.........+ .  ...++.++.+|+.+||+.||.+|||+.|+++
T Consensus       244 -----~~pf~~~-----~~~~~~~~i~~~~~~~~~~-~--~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          244 -----YPPFGGQ-----NDQDIIKKVEKGKYYFDFN-D--WKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             -----SCSSCCS-----SHHHHHHHHHHCCCCCCHH-H--HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----CCCCCCC-----CHHHHHHHHHcCCCCCCcc-c--cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                 7777653     2333333333222211111 0  0235678999999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.4e-42  Score=364.69  Aligned_cols=245  Identities=23%  Similarity=0.313  Sum_probs=195.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhc-cCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|++.+.||+|+||.||+|++  +++.||||++....    ........|...+..+ +||||+++++++.+.    .
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~----~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----D  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS----S
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC----C
Confidence            36799999999999999999998  57889999986431    1112222334344333 799999999998776    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+||||||+++|+|.+++.+ ..+++..+..++.||+.||+|||+.        +|+||||||+||||+.++.+||+|||
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------gIiHrDLKp~NILl~~~g~ikL~DFG  487 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK--------GIIYRDLKLDNVMLDSEGHIKIADFG  487 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------SEECCCCCSTTEEECSSSCEEECCCT
T ss_pred             EEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeEeccCChhhEEEcCCCcEEEeecc
Confidence            58999999999999999975 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +|+.......    ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.  
T Consensus       488 la~~~~~~~~----~~~~~~GT~~Y~APE~l~~~------~~~~~~DvwSlGvilyelltG----------~~Pf~~~--  545 (674)
T 3pfq_A          488 MCKENIWDGV----TTKTFCGTPDYIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAG----------QAPFEGE--  545 (674)
T ss_dssp             TCEECCCTTC----CBCCCCSCSSSCCHHHHTCC------CBSTHHHHHHHHHHHHHHHHS----------SCSSCCS--
T ss_pred             eeeccccCCc----ccccccCCCcccCHhhhcCC------CCCccceEechHHHHHHHHcC----------CCCCCCC--
Confidence            9975432221    12456899999999999876      677899999999999999999          7788653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcH-----HHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA-----LRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~  423 (443)
                         ...++...+..  ....+|     ...+.++.+||.+||+.||++||++     +||++
T Consensus       546 ---~~~~~~~~i~~--~~~~~p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          546 ---DEDELFQSIME--HNVAYP-----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             ---SHHHHHHHHHS--SCCCCC-----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ---CHHHHHHHHHh--CCCCCC-----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence               23344333322  223333     3356789999999999999999997     66654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.9e-42  Score=334.10  Aligned_cols=254  Identities=18%  Similarity=0.284  Sum_probs=194.2

Q ss_pred             HHHhhhhcccccc-ceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhc-cCCCceeeeeeccc
Q psy14889        129 LIQRTLAKQISLS-ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLL-RHENILGYIGSDMT  201 (443)
Q Consensus       129 ~~~~~~~~~~~~~-~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l-~H~nIv~l~g~~~~  201 (443)
                      ...+.+.+.|.+. +.||+|+||.||+|..  +++.||||++......   ......|+..+..+ +||||+++++++..
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence            3445666788887 8999999999999998  5899999988653221   22233455444445 56999999999876


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--  276 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--  276 (443)
                      .    ..+++||||+++|+|.+++..   ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.  
T Consensus       101 ~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~--------givH~Dikp~NIl~~~~~  168 (327)
T 3lm5_A          101 T----SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN--------NIVHLDLKPQNILLSSIY  168 (327)
T ss_dssp             S----SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEESCBT
T ss_pred             C----CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCcCChHHEEEecCC
Confidence            6    458999999999999999854   5699999999999999999999999        9999999999999998  


Q ss_pred             -CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccc
Q psy14889        277 -NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE  355 (443)
Q Consensus       277 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~  355 (443)
                       ++.+||+|||+++.......     .....||+.|+|||++.+.      .++.++||||||+++|||++|        
T Consensus       169 ~~~~~kL~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g--------  229 (327)
T 3lm5_A          169 PLGDIKIVDFGMSRKIGHACE-----LREIMGTPEYLAPEILNYD------PITTATDMWNIGIIAYMLLTH--------  229 (327)
T ss_dssp             TBCCEEECCGGGCEEC--------------CCCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS--------
T ss_pred             CCCcEEEeeCccccccCCccc-----cccccCCcCccCCeeecCC------CCCchhhHHHHHHHHHHHHhC--------
Confidence             78999999999987654322     1335799999999999766      677899999999999999999        


Q ss_pred             ccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       356 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ..||...     ........+.......  +.. ....++..+.+++.+||+.||++|||+.++++
T Consensus       230 --~~pf~~~-----~~~~~~~~i~~~~~~~--~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          230 --TSPFVGE-----DNQETYLNISQVNVDY--SEE-TFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             --SCSSCCS-----SHHHHHHHHHHTCCCC--CTT-TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --CCCCCCC-----CchHHHHHHHhccccc--Cch-hhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence              6777553     2222222222111111  111 11336678999999999999999999999976

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.7e-42  Score=340.67  Aligned_cols=259  Identities=22%  Similarity=0.297  Sum_probs=196.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccC-CcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSR-NSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~-~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||++.......  .....|+..+..++||||+++++++.... ......+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            6899999999999999999987  58899999986433222  22345666666799999999999987553 2224579


Q ss_pred             eeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        211 LVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      +||||+. |+|.++++...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++.
T Consensus       107 iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          107 IVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            9999998 5999999988999999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ........ .......||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.....    
T Consensus       178 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~pf~~~~~----  237 (364)
T 3qyz_A          178 ADPDHDHT-GFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIWSVGCILAEMLSN----------RPIFPGKHY----  237 (364)
T ss_dssp             CCGGGCBC-CTTCCCCSCGGGCCHHHHHTBC-----SCSTHHHHHHHHHHHHHHHHS----------SCSSCCSSG----
T ss_pred             cCCCCCcc-ccccccccccCCCCCHHhcCCC-----CCCcchhHHHHHHHHHHHHHC----------CCCCCCCCh----
Confidence            65433221 1124457999999999876542     466899999999999999999          566654321    


Q ss_pred             hHHHHhhhhhc-----------------------CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICID-----------------------QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+.+.......                       ......+........+.++.+|+.+||+.||++|||+.|+++
T Consensus       238 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             GGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11111111000                       000000000001234567999999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.1e-42  Score=355.13  Aligned_cols=249  Identities=22%  Similarity=0.357  Sum_probs=199.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+.++|++.+.||+|+||.||+|..  +|+.||||++....    ........|+..+..++||||+++++++.+.    
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----   98 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK----   98 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence            3457899999999999999999998  58999999986532    1222334666677779999999999998776    


Q ss_pred             cEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEE
Q psy14889        207 TQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVI  282 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl  282 (443)
                      ..+++||||+.+|+|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+|||+   +.++.+||
T Consensus        99 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~~~~kl  170 (484)
T 3nyv_A           99 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--------KIVHRDLKPENLLLESKSKDANIRI  170 (484)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred             CEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCHHHEEEecCCCCCcEEE
Confidence            46899999999999999885 46799999999999999999999999        99999999999999   56789999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+++.+.....     .....||+.|+|||++.+       .++.++|||||||++|||++|          ..||.
T Consensus       171 ~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g----------~~pf~  228 (484)
T 3nyv_A          171 IDFGLSTHFEASKK-----MKDKIGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSG----------CPPFN  228 (484)
T ss_dssp             CCTTHHHHBCCCCS-----HHHHTTGGGTCCHHHHHT-------CCCTHHHHHHHHHHHHHHHHS----------SCSSC
T ss_pred             EeeeeeEEcccccc-----cccCCCCccccCceeecC-------CCCCcceeHHHHHHHHHHHHC----------CCCCC
Confidence            99999976654321     123469999999999865       456899999999999999999          77776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..     ....+...+.........+.   ...++..+.+|+.+||+.||++|||+.|+++
T Consensus       229 ~~-----~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          229 GA-----NEYDILKKVEKGKYTFELPQ---WKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CS-----SHHHHHHHHHHCCCCCCSGG---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CC-----CHHHHHHHHHcCCCCCCCcc---cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            53     22333333333322222221   1346678999999999999999999999986

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.6e-42  Score=342.43  Aligned_cols=254  Identities=19%  Similarity=0.335  Sum_probs=188.0

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccc---hHHHHHHHHHHhcc--CCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS---WSRETEIYSTVLLR--HENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~--H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|.. +++.||||++.......   .....|+..+..++  ||||+++++++...    ..+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~----~~~  131 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----QYI  131 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC----CEE
Confidence            5699999999999999999988 58899999986543221   22234555555565  59999999998776    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||| +.+|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++ ++.+||+|||++
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~--------~ivHrDlkp~NIll~-~~~~kl~DFG~a  201 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH--------GIVHSDLKPANFLIV-DGMLKLIDFGIA  201 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT--------TCCCCCCCGGGEEES-SSCEEECCCSSS
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCHHHEEEE-CCeEEEEecCcc
Confidence            99999 567899999964 5789999999999999999999998        999999999999995 589999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCccccccccccccc-----CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-----DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD  363 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-----~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~  363 (443)
                      +.+.......  ......||+.|+|||++.+....     ....++.++|||||||++|||++|          ..||..
T Consensus       202 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G----------~~Pf~~  269 (390)
T 2zmd_A          202 NQMQPDTTSV--VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG----------KTPFQQ  269 (390)
T ss_dssp             CCC-----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHS----------SCTTTT
T ss_pred             ccccCCCccc--cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHC----------CCcchh
Confidence            8765432211  12345799999999998752110     001567899999999999999999          677765


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      ...   ....+...+ ........+.     ..+.++.+|+.+||+.||++|||+.|+++.
T Consensus       270 ~~~---~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          270 IIN---QISKLHAII-DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CCC---HHHHHHHHH-CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhH---HHHHHHHHh-CccccCCCCc-----cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            321   112222222 1122222222     235679999999999999999999999864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=7.6e-43  Score=349.53  Aligned_cols=254  Identities=20%  Similarity=0.283  Sum_probs=187.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---------cchHHHHHHHHHHhccCCCceeeeeecc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---------ASWSRETEIYSTVLLRHENILGYIGSDM  200 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---------~~~~~e~ei~~~~~l~H~nIv~l~g~~~  200 (443)
                      ..+.++|.+.+.||+|+||.||+|..  +++.||||++.....         .....+.|+..+..++||||+++++++.
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            45568999999999999999999998  578999999865321         1112345666666699999999999975


Q ss_pred             ccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-
Q psy14889        201 TSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-  278 (443)
Q Consensus       201 ~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-  278 (443)
                      ..     .+++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++ 
T Consensus       211 ~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~ivHrDlkp~NIll~~~~~  277 (419)
T 3i6u_A          211 AE-----DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEE  277 (419)
T ss_dssp             SS-----EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEESSSSS
T ss_pred             cC-----ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCChHhEEEecCCC
Confidence            43     36899999999999998864 6799999999999999999999998        999999999999997544 


Q ss_pred             --cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccc
Q psy14889        279 --TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE  356 (443)
Q Consensus       279 --~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~  356 (443)
                        .+||+|||+++.......     .....||+.|+|||++.+...   ..++.++|||||||++|||++|         
T Consensus       278 ~~~~kl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~---~~~~~~~DiwslG~il~~lltg---------  340 (419)
T 3i6u_A          278 DCLIKITDFGHSKILGETSL-----MRTLCGTPTYLAPEVLVSVGT---AGYNRAVDCWSLGVILFICLSG---------  340 (419)
T ss_dssp             SCCEEECCSSTTTSCC----------------CTTCCTTTTC-------CTTHHHHHHHHHHHHHHHHHHS---------
T ss_pred             cceEEEeecccceecCCCcc-----ccccCCCCCccCceeeecCCC---CCCCchhhhHhHHHHHHHHHHC---------
Confidence              599999999987653221     234579999999999864211   1566899999999999999999         


Q ss_pred             cCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       357 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ..||.......    .+...+... .....+..  ....+..+.+|+.+||+.||++|||+.|+++
T Consensus       341 -~~pf~~~~~~~----~~~~~i~~~-~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          341 -YPPFSEHRTQV----SLKDQITSG-KYNFIPEV--WAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             -SCSSCCCSSSC----CHHHHHHTT-CCCCCHHH--HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -CCCCCCCcchH----HHHHHHhcC-CCCCCchh--hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence             66775532211    122222111 11111110  0224678999999999999999999999886

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=7.1e-42  Score=324.41  Aligned_cols=242  Identities=22%  Similarity=0.375  Sum_probs=195.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|..  ++..||||++....    ........|+..+..++||||+++++++.+.    ...
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   89 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR----KRI   89 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC----CEE
Confidence            6899999999999999999998  47789999986432    1122334566666679999999999998765    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+||+++.++.+||+|||++
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~kl~Dfg~~  161 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER--------KVIHRDIKPENLLMGYKGELKIADFGWS  161 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCHHHEEEcCCCCEEEeccccc
Confidence            999999999999999864 5799999999999999999999998        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .......      .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||...    
T Consensus       162 ~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~~~----  215 (284)
T 2vgo_A          162 VHAPSLR------RRTMCGTLDYLPPEMIEGK------THDEKVDLWCAGVLCYEFLVG----------MPPFDSP----  215 (284)
T ss_dssp             EECSSSC------BCCCCSCGGGCCHHHHTTC------CBCTTHHHHHHHHHHHHHHHS----------SCTTCCS----
T ss_pred             ccCcccc------cccccCCCCcCCHHHhccC------CCCcccchhhHHHHHHHHHHC----------CCCCCCC----
Confidence            6554321      1334789999999999876      667899999999999999999          6677543    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ........+..  ....++     ...+..+.+++.+||+.||.+|||+.++++
T Consensus       216 -~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          216 -SHTETHRRIVN--VDLKFP-----PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -SHHHHHHHHHT--TCCCCC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -CHhHHHHHHhc--cccCCC-----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence             22222222211  222233     235578999999999999999999999987

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=7e-42  Score=326.49  Aligned_cols=255  Identities=22%  Similarity=0.292  Sum_probs=198.0

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----------chHHHHHHHHHHhcc-CCCceeeeeecc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----------SWSRETEIYSTVLLR-HENILGYIGSDM  200 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----------~~~~e~ei~~~~~l~-H~nIv~l~g~~~  200 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||||++......          ......|+..+..+. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            347899999999999999999998  5789999998654311          111234555555574 999999999987


Q ss_pred             ccCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc
Q psy14889        201 TSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT  279 (443)
Q Consensus       201 ~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~  279 (443)
                      ..    ...++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+||+++.++.
T Consensus        95 ~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~  162 (298)
T 1phk_A           95 TN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL--------NIVHRDLKPENILLDDDMN  162 (298)
T ss_dssp             CS----SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCC
T ss_pred             cC----CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCcceEEEcCCCc
Confidence            65    468999999999999999975 5799999999999999999999999        9999999999999999999


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||++........     .....||+.|+|||++.+........++.++||||||+++|||++|          ..
T Consensus       163 ~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g----------~~  227 (298)
T 1phk_A          163 IKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG----------SP  227 (298)
T ss_dssp             EEECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EEEecccchhhcCCCcc-----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC----------CC
Confidence            99999999976654221     1334789999999998643221112567899999999999999999          66


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ||...     ........+.........+.   ....+..+.+++.+||+.||++|||+.|+++
T Consensus       228 p~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          228 PFWHR-----KQMLMLRMIMSGNYQFGSPE---WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             SSCCS-----SHHHHHHHHHHTCCCCCTTT---GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCcCc-----cHHHHHHHHhcCCcccCccc---ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            77543     22333333322222211111   1346678999999999999999999999875

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.7e-42  Score=328.40  Aligned_cols=249  Identities=29%  Similarity=0.428  Sum_probs=192.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ...++|++.+.||+|+||.||+|.+  +|+.||||++..... ......|+..+..++||||+++++++...    ..++
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~  100 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-LQEIIKEISIMQQCDSPHVVKYYGSYFKN----TDLW  100 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-CHHHHHHHHHHHTCCCTTBCCEEEEEEET----TEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-HHHHHHHHHHHHhCCCCCCccEEEEEEeC----CEEE
Confidence            3457899999999999999999998  489999999865432 22334566666669999999999998765    4579


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+++|+|.+++.  ...+++..+..++.|++.||.|||+.        +|+|+||||+||+++.++.+||+|||++
T Consensus       101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~kl~dfg~~  172 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM--------RKIHRDIKAGNILLNTEGHAKLADFGVA  172 (314)
T ss_dssp             EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcCCCcCHHHEEECCCCCEEEeecccc
Confidence            9999999999999986  46799999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||....   
T Consensus       173 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~p~~~~~---  229 (314)
T 3com_A          173 GQLTDTMAK----RNTVIGTPFWMAPEVIQEI------GYNCVADIWSLGITAIEMAEG----------KPPYADIH---  229 (314)
T ss_dssp             EECBTTBSC----BCCCCSCGGGCCHHHHSSS------CBCTTHHHHHHHHHHHHHHHS----------SCTTTTSC---
T ss_pred             hhhhhhccc----cCccCCCCCccChhhcCCC------CCCccccHHHHHHHHHHHHhC----------CCCCCCCC---
Confidence            766543221    2345789999999999876      667899999999999999999          66776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        .......... ...+...   .+...+..+.+++.+||+.||.+|||+.++++
T Consensus       230 --~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          230 --PMRAIFMIPT-NPPPTFR---KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             --HHHHHHHHHH-SCCCCCS---SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             --hHHHHHHHhc-CCCcccC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence              1111111111 1111111   12335678999999999999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.4e-43  Score=337.84  Aligned_cols=252  Identities=22%  Similarity=0.295  Sum_probs=183.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch--HHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW--SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~--~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|.+.+.||+|+||.||+|..  +++.||||++........  ....|+..+..++||||+++++++.+.    ..+++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~l   77 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE----KSLTL   77 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS----SCEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC----CEEEE
Confidence            5799999999999999999998  588999998864332211  112355556669999999999998776    34799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||++ |+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  148 (324)
T 3mtl_A           78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ--------KVLHRDLKPQNLLINERGELKLADFGLAR  148 (324)
T ss_dssp             EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred             Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccCCCcCHHHEEECCCCCEEEccCcccc
Confidence            999998 599998864  4589999999999999999999999        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+..    
T Consensus       149 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~g----------~~pf~~~~----  205 (324)
T 3mtl_A          149 AKSIPTKT----YDNEVVTLWYRPPDILLGST-----DYSTQIDMWGVGCIFYEMATG----------RPLFPGST----  205 (324)
T ss_dssp             CC----------------CGGGCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS----
T ss_pred             cccCCccc----cccccCcccccChhhhcCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            65432221    23447899999999987641     567899999999999999999          55665421    


Q ss_pred             ChHHHHhhhhhcCCC--CCCC--------------CCC------CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQR--PVLP--------------NRW------VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~--~~~~--------------~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+............  ...+              ...      .....+.++.+|+.+||+.||++|||+.|+++
T Consensus       206 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          206 VEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            111111111110000  0000              000      00124567899999999999999999999987

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.6e-42  Score=339.35  Aligned_cols=254  Identities=20%  Similarity=0.325  Sum_probs=190.2

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC-------
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN-------  204 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-------  204 (443)
                      ..++|++.+.||+|+||.||+|..  +|+.||||++..... ...  .|+..+..++||||+++++++.....       
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~--~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-YKN--RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-SCC--HHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-hHH--HHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            347899999999999999999988  689999998865432 223  35555566999999999999865321       


Q ss_pred             ---------------------------cccEEEeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHc
Q psy14889        205 ---------------------------SCTQLWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTE  252 (443)
Q Consensus       205 ---------------------------~~~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~  252 (443)
                                                 ....+++||||++ |+|.+.+.     ...+++..+..++.||+.||.|||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                       1245889999998 58887774     36799999999999999999999998


Q ss_pred             hhcCCCCCCeEEeCCCCCCEEEc-CCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCc
Q psy14889        253 IFGTQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKK  331 (443)
Q Consensus       253 ~~~~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  331 (443)
                              +|+||||||+|||++ .++.+||+|||+++.+.....     .....||+.|+|||++.+..     .++.+
T Consensus       161 --------gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~  222 (383)
T 3eb0_A          161 --------GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-----SVAYICSRFYRAPELMLGAT-----EYTPS  222 (383)
T ss_dssp             --------TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-----CCCCCCCSSCCCHHHHTTCS-----SCCTH
T ss_pred             --------cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-----CcCcccCCCccCHHHhcCCC-----CCCcc
Confidence                    999999999999998 688999999999987654322     23457899999999987642     46789


Q ss_pred             cchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcC--------------CCCCCCC----CC--
Q psy14889        332 ADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ--------------QRPVLPN----RW--  391 (443)
Q Consensus       332 sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~----~~--  391 (443)
                      +|||||||++|||++|          ..||.+..    ..+.+...+....              ....++.    .|  
T Consensus       223 ~DiwslG~il~ell~g----------~~pf~~~~----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (383)
T 3eb0_A          223 IDLWSIGCVFGELILG----------KPLFSGET----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK  288 (383)
T ss_dssp             HHHHHHHHHHHHHHHS----------SCSSCCSS----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH
T ss_pred             hhhhhHHHHHHHHHhC----------CCCCCCCC----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh
Confidence            9999999999999999          66666531    1122222221100              0001111    00  


Q ss_pred             -CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        392 -VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       392 -~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .+...+.++.+|+.+||+.||++|||+.|+++
T Consensus       289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             12335678999999999999999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.7e-42  Score=334.28  Aligned_cols=251  Identities=21%  Similarity=0.266  Sum_probs=191.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||.||+|..  +++.||||++.........+|.+++  ..++ ||||+++++++.+...  ...++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l--~~l~~~~~i~~~~~~~~~~~~--~~~~lv  111 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL--ENLRGGPNIITLADIVKDPVS--RTPALV  111 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHH--HHHTTSTTBCCEEEEEECTTT--CCEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHH--HHcCCCCCEEEeeeeeccCCC--CceEEE
Confidence            6899999999999999999987  6899999998765554444555444  4476 9999999999876433  457999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~  291 (443)
                      |||+.+++|.++++.  +++..+..++.||+.||+|||+.        +|+||||||+|||++.++ .+||+|||+++..
T Consensus       112 ~e~~~~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSM--------GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             EECCCCCCHHHHGGG--CCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeccCchhHHHHHHh--CCHHHHHHHHHHHHHHHHHHHhC--------CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            999999999999854  89999999999999999999999        999999999999999777 8999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....     .....||..|+|||.+.+..     .++.++|||||||++|||++|          ..||.....   ..
T Consensus       182 ~~~~~-----~~~~~~~~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~ll~g----------~~p~~~~~~---~~  238 (330)
T 3nsz_A          182 HPGQE-----YNVRVASRYFKGPELLVDYQ-----MYDYSLDMWSLGCMLASMIFR----------KEPFFHGHD---NY  238 (330)
T ss_dssp             CTTCC-----CCSCCSCGGGCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHT----------CSSSSCCSS---HH
T ss_pred             CCCCc-----cccccccccccChhhhcCCC-----cCCchhhHHHHHHHHHHHHhC----------CCCcccCCc---hH
Confidence            54322     23457899999999987631     567899999999999999999          556543211   11


Q ss_pred             HHHHhhh------------hhcCC--------------CC---CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        372 DDMRKVI------------CIDQQ--------------RP---VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       372 ~~~~~~~------------~~~~~--------------~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      +.+....            .....              ..   ...........+.++.+|+.+||+.||++|||+.|++
T Consensus       239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l  318 (330)
T 3nsz_A          239 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM  318 (330)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence            1111100            00000              00   0000001122567899999999999999999999998


Q ss_pred             H
Q psy14889        423 K  423 (443)
Q Consensus       423 ~  423 (443)
                      +
T Consensus       319 ~  319 (330)
T 3nsz_A          319 E  319 (330)
T ss_dssp             T
T ss_pred             c
Confidence            6

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3e-42  Score=346.22  Aligned_cols=192  Identities=23%  Similarity=0.305  Sum_probs=159.0

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc------cCCCceeeeeeccccC
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL------RHENILGYIGSDMTSR  203 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l------~H~nIv~l~g~~~~~~  203 (443)
                      ..+..+|++.+.||+|+||.||+|..  +++.||||++............|+..+..+      +|+||+++++++... 
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  171 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR-  171 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET-
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC-
Confidence            44567899999999999999999988  478999999865433222333344444334      678999999998776 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-  279 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-  279 (443)
                         ..+++||||+. |+|.+++..   ..+++..+..++.||+.||+|||+.        +|+||||||+|||++.++. 
T Consensus       172 ---~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlKp~NILl~~~~~~  239 (429)
T 3kvw_A          172 ---NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN--------RIIHCDLKPENILLKQQGRS  239 (429)
T ss_dssp             ---TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH--------TEECSCCSGGGEEESSTTSC
T ss_pred             ---CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEEccCCCc
Confidence               46899999997 699999865   3499999999999999999999999        9999999999999999987 


Q ss_pred             -EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhccc
Q psy14889        280 -CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK  349 (443)
Q Consensus       280 -~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~  349 (443)
                       +||+|||++......       .....||+.|+|||++.+.      .++.++|||||||++|||++|++
T Consensus       240 ~vkL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG~~  297 (429)
T 3kvw_A          240 GIKVIDFGSSCYEHQR-------VYTYIQSRFYRAPEVILGA------RYGMPIDMWSLGCILAELLTGYP  297 (429)
T ss_dssp             CEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHHTB------CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ceEEeecccceecCCc-------ccccCCCCCccChHHHhCC------CCCchHHHHhHHHHHHHHHhCCC
Confidence             999999999654432       2345789999999999876      67789999999999999999933

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.1e-42  Score=338.48  Aligned_cols=255  Identities=19%  Similarity=0.300  Sum_probs=172.4

Q ss_pred             hhhhccccccc-eeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        132 RTLAKQISLSE-CIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       132 ~~~~~~~~~~~-~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ..+.++|.+.+ .||+|+||.||+|.+  +|+.||||++.....  ...+... ....+.||||+++++++.........
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~e~~~-~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK--ARQEVDH-HWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH--HHHHHHH-HHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH--HHHHHHH-HHHhcCCCChHHHHHHHhhccCCCce
Confidence            34567899854 699999999999998  489999999865322  2222222 23347999999999998764443356


Q ss_pred             EEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---CcEEE
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVI  282 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~~kl  282 (443)
                      +++||||+++|+|.+++.+.   .+++.++..++.||+.||.|||+.        +|+||||||+|||++.+   +.+||
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~--------~ivH~dlkp~NIll~~~~~~~~~kl  172 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH--------NIAHRDVKPENLLYTSKEKDAVLKL  172 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEESCSSTTCCEEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCHHHEEEEecCCCceEEE
Confidence            89999999999999999653   599999999999999999999999        99999999999999864   55999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+++......      .....||+.|+|||++.+.      .++.++||||||+++|||++|          ..||.
T Consensus       173 ~Dfg~~~~~~~~~------~~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf~  230 (336)
T 3fhr_A          173 TDFGFAKETTQNA------LQTPCYTPYYVAPEVLGPE------KYDKSCDMWSLGVIMYILLCG----------FPPFY  230 (336)
T ss_dssp             CCCTTCEEC----------------------------C------HHHHHHHHHHHHHHHHHHHHS----------SCCC-
T ss_pred             eccccceeccccc------cccCCCCcCccChhhhCCC------CCCchhhHHHHHHHHHHHHHC----------CCCCC
Confidence            9999997654322      1234689999999998765      556799999999999999999          66665


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ......... .....+....  ...+.. ....++.++.+|+.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~-~~~~~~~~~~--~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          231 SNTGQAISP-GMKRRIRLGQ--YGFPNP-EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             -----------------------CCCTT-TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             Cccchhhhh-hHHHhhhccc--cccCch-hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            432211111 1111111111  111111 11236678999999999999999999999997

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.5e-42  Score=328.19  Aligned_cols=251  Identities=24%  Similarity=0.387  Sum_probs=182.5

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchH--HH-HHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWS--RE-TEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~--~e-~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .++|++.+.||+|+||.||+|..  +|+.||||++.........  .. .+...+..++||||+++++++.+..    ..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~----~~   81 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----DV   81 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----SE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC----CE
Confidence            47899999999999999999998  6899999998654322211  11 2222345589999999999998763    47


Q ss_pred             EeeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ++||||++ |+|.+++..     ..+++..+..++.|++.||.|||++.       +|+||||||+|||++.++.+||+|
T Consensus        82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-------~i~H~dlkp~Nil~~~~~~~kl~D  153 (290)
T 3fme_A           82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKMCD  153 (290)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS-------CCCCCCCSGGGCEECTTCCEEBCC
T ss_pred             EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CeecCCCCHHHEEECCCCCEEEee
Confidence            99999998 588887743     57999999999999999999999852       899999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++........     ....||+.|+|||.+......  ..++.++||||||+++|||++|          ..||...
T Consensus       154 fg~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~--~~~~~~~Di~slG~il~~l~~g----------~~p~~~~  216 (290)
T 3fme_A          154 FGISGYLVDDVAK-----DIDAGCKPYMAPERINPELNQ--KGYSVKSDIWSLGITMIELAIL----------RFPYDSW  216 (290)
T ss_dssp             C--------------------CCCCCCSCHHHHSCCTTC----CCHHHHHHHHHHHHHHHHHT----------SCSSCCC
T ss_pred             cCCcccccccccc-----cccCCCccccChhhcChhhcC--cCCCcHHHHHHHHHHHHHHHHC----------CCCcccc
Confidence            9999766543221     234689999999997422111  1567899999999999999999          6677543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .   .....+.....  ...+..+.    ...+.++.+++.+||+.||++|||+.|+++
T Consensus       217 ~---~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          217 G---TPFQQLKQVVE--EPSPQLPA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             S---CHHHHHHHHHH--SCCCCCCT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             C---chHHHHHHHhc--cCCCCccc----ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1   12233333332  22222222    335678999999999999999999999987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=6.3e-42  Score=334.85  Aligned_cols=267  Identities=19%  Similarity=0.250  Sum_probs=193.4

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccC-Cccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSR-NSCT  207 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~-~~~~  207 (443)
                      .+.++|++.+.||+|+||.||+|.+  +|+.||||++.......  .....|+..+..++||||+++++++.... ....
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            3457899999999999999999998  48899999986433221  22235666666799999999999876532 1224


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      ..++||||+. |+|.+++....+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus        88 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~--------~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           88 EVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS--------NVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             CEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC--------CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence            5799999998 6999999888999999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCC------CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        288 AVSYSQLSNKMD------IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       288 a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      ++..........      .......||+.|+|||++....     .++.++|||||||++|||++|          ..||
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~g----------~~pf  223 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA-----KYSRAMDVWSCGCILAELFLR----------RPIF  223 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCC-----CCCHHHHHHHHHHHHHHHHHS----------SCSC
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCC-----CccchhhHHHHHHHHHHHHhC----------CCCC
Confidence            987654321111      0123357899999999876531     566899999999999999999          4455


Q ss_pred             CCCCC--------------------CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        362 HDLVP--------------------MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       362 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                      .+...                    ..................+..+.......++.++.+|+.+||+.||++|||+.|+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  303 (353)
T 2b9h_A          224 PGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA  303 (353)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence            43210                    0000000111110000000000000012356789999999999999999999999


Q ss_pred             HH
Q psy14889        422 KK  423 (443)
Q Consensus       422 l~  423 (443)
                      ++
T Consensus       304 l~  305 (353)
T 2b9h_A          304 LE  305 (353)
T ss_dssp             HT
T ss_pred             hc
Confidence            87

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=8.2e-42  Score=325.39  Aligned_cols=248  Identities=29%  Similarity=0.396  Sum_probs=190.8

Q ss_pred             cccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      +|.....||+|+||.||+|.+  +++.||||.+...... ......|+..+..++||||+++++++...    ...++||
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~   98 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN----GFIKIFM   98 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET----TEEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC----CcEEEEE
Confidence            344455999999999999998  5789999988654332 22334566667779999999999998765    4579999


Q ss_pred             cccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-CCcEEEEecCCc
Q psy14889        214 HYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLA  288 (443)
Q Consensus       214 e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-~~~~kl~DfGla  288 (443)
                      ||+++|+|.+++...    .+++..+..++.|++.||.|||+.        +|+|+||||+||+++. ++.+||+|||++
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~  170 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--------QIVHRDIKGDNVLINTYSGVLKISDFGTS  170 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC--------CEEccCCChhhEEEECCCCCEEEeecccc
Confidence            999999999999653    467889999999999999999998        9999999999999988 899999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....||+.|+|||++.+...    .++.++||||||+++|||++|          ..||.....  
T Consensus       171 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~----~~~~~~Di~slG~il~~l~~g----------~~pf~~~~~--  230 (295)
T 2clq_A          171 KRLAGINPC----TETFTGTLQYMAPEIIDKGPR----GYGKAADIWSLGCTIIEMATG----------KPPFYELGE--  230 (295)
T ss_dssp             EESCC---------CCCCCCGGGCCHHHHHHGGG----GCSHHHHHHHHHHHHHHHHHT----------SCTTGGGSS--
T ss_pred             cccCCCCCc----ccccCCCccccChhhhcCCCC----CCCcHHHHHHHHHHHHHHHHC----------CCCccCCCc--
Confidence            766432211    234578999999999976421    356799999999999999999          667754311  


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ........ ......+.++     ..++.++.+++.+||+.||++|||+.++++
T Consensus       231 -~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          231 -PQAAMFKV-GMFKVHPEIP-----ESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             -HHHHHHHH-HHHCCCCCCC-----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             -hhHHHHhh-cccccccccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             11111111 1122333333     335678999999999999999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-42  Score=334.82  Aligned_cols=254  Identities=23%  Similarity=0.299  Sum_probs=187.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++......      ......|+..+..++||||+++++++.+..   
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---   85 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS---   85 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT---
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC---
Confidence            47899999999999999999998  4889999988643211      122345666666699999999999987663   


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       ..++||||+++ +|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        86 -~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~kl~D  155 (346)
T 1ua2_A           86 -NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH--------WILHRDLKPNNLLLDENGVLKLAD  155 (346)
T ss_dssp             -CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEEECC
T ss_pred             -ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC--------CEECCCCCHHHEEEcCCCCEEEEe
Confidence             46999999985 89988865  3589999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.+......    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||...
T Consensus       156 fg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~~~~~~  216 (346)
T 1ua2_A          156 FGLAKSFGSPNRA----YTHQVVTRWYRAPELLFGAR-----MYGVGVDMWAVGCILAELLLR----------VPFLPGD  216 (346)
T ss_dssp             CGGGSTTTSCCCC----CCCSCCCCTTCCHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHS----------SCSSCCS
T ss_pred             cccceeccCCccc----CCcccccccccCchHhhCCC-----CCCchhhhHhHHHHHHHHHHC----------CCCCCCC
Confidence            9999776432221    23457899999999987541     456899999999999999999          4555442


Q ss_pred             CCCCCChHHHHhhhhhcCCCC--C------CCCC------------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRP--V------LPNR------------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~--~------~~~~------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .    ..+.+...........  .      .+..            ......+.++.+|+.+||+.||++|||+.|+++.
T Consensus       217 ~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          217 S----DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             S----HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             C----HHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1    1122222221110000  0      0000            0012345789999999999999999999999873

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.9e-42  Score=337.48  Aligned_cols=251  Identities=23%  Similarity=0.309  Sum_probs=193.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++.......  .....|+..+..++||||+++++++...    ..++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~  107 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEIS  107 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET----TEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC----CEEE
Confidence            47899999999999999999998  48899999987543222  2234566666679999999999998876    4589


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++|+|.+++.. ..+++..+..++.|++.||.|||+..       +|+||||||+|||++.++.+||+|||++.
T Consensus       108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  180 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-------KIMHRDVKPSNILVNSRGEIKLCDFGVSG  180 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH-------CCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             EEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC-------CEEcCCccHHHEEECCCCCEEEEECCCCc
Confidence            99999999999999975 57999999999999999999999842       89999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC---
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP---  366 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~---  366 (443)
                      ......      .....||+.|+|||++.+.      .++.++||||||+++|||++|+.          ||.....   
T Consensus       181 ~~~~~~------~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~----------pf~~~~~~~~  238 (360)
T 3eqc_A          181 QLIDSM------ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMAVGRY----------PIPPPDAKEL  238 (360)
T ss_dssp             HHHHHC----------CCCCTTCCHHHHTTC------CCSHHHHHHHHHHHHHHHHHTSC----------CSSCCCHHHH
T ss_pred             cccccc------ccCCCCCCCeECHHHHcCC------CCCchhhHHHHHHHHHHHHhCCC----------CCCCCCHHHH
Confidence            654321      1234789999999999876      67789999999999999999954          4432100   


Q ss_pred             ----------------------------------CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCc
Q psy14889        367 ----------------------------------MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA  412 (443)
Q Consensus       367 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  412 (443)
                                                        ...........+.. ...+..+    ....+.++.+|+.+||+.||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~li~~~L~~dP  313 (360)
T 3eqc_A          239 ELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVN-EPPPKLP----SGVFSLEFQDFVNKCLIKNP  313 (360)
T ss_dssp             HHHHC------------------------------CCCHHHHHHHHHH-SCCCCCC----TTTSCHHHHHHHHHHHCSST
T ss_pred             HHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhc-cCCCCCC----cccccHHHHHHHHHHhhcCh
Confidence                                              00000111111111 1122222    23356789999999999999


Q ss_pred             CCCCcHHHHHH
Q psy14889        413 NVRLSALRVKK  423 (443)
Q Consensus       413 ~~Rps~~evl~  423 (443)
                      ++|||+.|+++
T Consensus       314 ~~Rpt~~ell~  324 (360)
T 3eqc_A          314 AERADLKQLMV  324 (360)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hhCCCHHHHhh
Confidence            99999999987

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.6e-42  Score=330.05  Aligned_cols=254  Identities=24%  Similarity=0.372  Sum_probs=191.6

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..++|++.+.||+|+||.||+|.+  +++.||+|++....... .....|+..+..++||||+++++++...    ...+
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~   92 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD----GKLW   92 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-----CEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC----CeEE
Confidence            347899999999999999999998  48899999886543322 2334556666669999999999998876    3579


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+++|+|.+++..  ..+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||++
T Consensus        93 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A           93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK--------RIIHRDLKAGNVLMTLEGDIRLADFGVS  164 (302)
T ss_dssp             EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred             EEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence            99999999999999864  6799999999999999999999999        9999999999999999999999999997


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .........    .....||+.|+|||++....... ..++.++||||||+++|||++|          ..||....   
T Consensus       165 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~~~~~~Di~slG~il~~l~~g----------~~p~~~~~---  226 (302)
T 2j7t_A          165 AKNLKTLQK----RDSFIGTPYWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQI----------EPPHHELN---  226 (302)
T ss_dssp             HHHHHHHHC---------CCGGGCCHHHHHHHHTTS-TTTTTHHHHHHHHHHHHHHHHS----------SCTTTTSC---
T ss_pred             ccccccccc----cccccCChhhcCCeeeccccCCC-CCCchhhhHHHHHHHHHHHhcC----------CCCCccCC---
Confidence            543321111    12346899999999985221100 1567899999999999999999          66776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       .......... . ..+..   ..+..++..+.+++.+||+.||++|||+.++++
T Consensus       227 -~~~~~~~~~~-~-~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          227 -PMRVLLKIAK-S-DPPTL---LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -HHHHHHHHHH-S-CCCCC---SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -HHHHHHHHhc-c-CCccc---CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             1122222221 1 11111   122446678999999999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=8.6e-43  Score=336.09  Aligned_cols=269  Identities=26%  Similarity=0.418  Sum_probs=195.9

Q ss_pred             hhhhccccccceeeeecCeEEEEEEECCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +...++|++.+.||+|+||.||+|.+.+ .||+|++.....   .....+.|+..+..++||||+++++++.+..    .
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~  103 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP----H  103 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS----C
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC----c
Confidence            3345789999999999999999999865 599998864321   1112234555555689999999999988763    4


Q ss_pred             EEeeecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++||||+++++|.+++...  .+++..+..++.||+.||.|||+.        +|+||||||+|||++ ++.+||+|||
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~--------~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK--------GILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCChhhEEEe-CCCEEEeecC
Confidence            79999999999999999764  599999999999999999999999        999999999999998 6799999999


Q ss_pred             CcccccccCCc-CCCCCCCcccccCccccccccccccc---CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        287 LAVSYSQLSNK-MDIPPNPRVGTKRYMSPEILDESINM---DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       287 la~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +++........ .........||+.|+|||++.+....   ....++.++||||||+++|||++|          ..||.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g----------~~p~~  244 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR----------EWPFK  244 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS----------SCSSS
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC----------CCCCC
Confidence            98765322111 11112334689999999998753210   012467899999999999999999          67776


Q ss_pred             CCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      ..     ........+.. ...+....    ..++.++.+++.+||+.||++|||+.++++.|+++......
T Consensus       245 ~~-----~~~~~~~~~~~-~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~  306 (319)
T 2y4i_B          245 TQ-----PAEAIIWQMGT-GMKPNLSQ----IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR  306 (319)
T ss_dssp             SC-----CHHHHHHHHHT-TCCCCCCC----SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred             CC-----CHHHHHHHhcc-CCCCCCCc----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            53     22333322222 22222221    23455799999999999999999999999999998876544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.1e-41  Score=321.61  Aligned_cols=246  Identities=22%  Similarity=0.353  Sum_probs=189.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.....    .......|+..+..++||||+++++++...    ..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   85 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP----TD   85 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC----Ce
Confidence            37899999999999999999998  589999999865321    122334566667779999999999998765    45


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.        +|+|+||||+||+++.++.+||+|||+
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~~l~dfg~  157 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--------MVVHRDLKPENVLLDAHMNAKIADFGL  157 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH--------CSSCCCCCGGGEEECTTSCEEECCCCG
T ss_pred             EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCChhhEEECCCCCEEEeeccc
Confidence            8999999999999999964 5799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      +........     .....||+.|+|||.+.+..     ..+.++||||||+++|||++|          ..||...   
T Consensus       158 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~~l~~l~~g----------~~p~~~~---  214 (276)
T 2h6d_A          158 SNMMSDGEF-----LRTSCGSPNYAAPEVISGRL-----YAGPEVDIWSCGVILYALLCG----------TLPFDDE---  214 (276)
T ss_dssp             GGCCCC------------------CCTGGGTTSC-----CCHHHHHHHHHHHHHHHHHHS----------SCSSCCS---
T ss_pred             ccccCCCcc-----eecccCCccccCHHHHcCCC-----CCCccchHHHHHHHHHHHHhC----------CCCCCCC---
Confidence            976653221     12346899999999987652     124789999999999999999          6677543   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                        ........+...  ....+     ...+..+.+++.+||+.||++|||+.++++.
T Consensus       215 --~~~~~~~~~~~~--~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          215 --HVPTLFKKIRGG--VFYIP-----EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             --SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --cHHHHHHHhhcC--cccCc-----hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              223333333221  12222     2355779999999999999999999999873

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.6e-42  Score=344.04  Aligned_cols=265  Identities=21%  Similarity=0.212  Sum_probs=193.8

Q ss_pred             hHHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc--------CCCceeeee
Q psy14889        128 LLIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR--------HENILGYIG  197 (443)
Q Consensus       128 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~--------H~nIv~l~g  197 (443)
                      ......+.++|++.+.||+|+||.||+|+.  +++.||||++............|+..+..++        |+||+++++
T Consensus        29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~  108 (397)
T 1wak_A           29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD  108 (397)
T ss_dssp             SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEE
T ss_pred             EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeec
Confidence            334455568999999999999999999987  5889999998654332223334555554454        888999999


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      ++.........+++||||+. |+|.+++..   ..+++..+..++.||+.||.|||+++       +|+||||||+|||+
T Consensus       109 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-------givHrDikp~NIll  180 (397)
T 1wak_A          109 DFKISGVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC-------RIIHTDIKPENILL  180 (397)
T ss_dssp             EEEEEETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT-------CEECCCCSGGGEEE
T ss_pred             ceeecCCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC-------CEecCCCCHHHeeE
Confidence            98754333367899999995 566666643   46999999999999999999999852       89999999999999


Q ss_pred             cCCC-------------------------------------------------cEEEEecCCcccccccCCcCCCCCCCc
Q psy14889        275 KTNG-------------------------------------------------TCVIADFGLAVSYSQLSNKMDIPPNPR  305 (443)
Q Consensus       275 ~~~~-------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~  305 (443)
                      +.++                                                 .+||+|||++......       ....
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~  253 (397)
T 1wak_A          181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTED  253 (397)
T ss_dssp             CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSC
T ss_pred             eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccC
Confidence            8775                                                 7999999999766532       1334


Q ss_pred             ccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh--HHHHhhhhhcCC
Q psy14889        306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF--DDMRKVICIDQQ  383 (443)
Q Consensus       306 ~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~--~~~~~~~~~~~~  383 (443)
                      .||+.|+|||++.+.      .++.++|||||||++|||+||          ..||..........  ..+.........
T Consensus       254 ~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~  317 (397)
T 1wak_A          254 IQTRQYRSLEVLIGS------GYNTPADIWSTACMAFELATG----------DYLFEPHSGEEYTRDEDHIALIIELLGK  317 (397)
T ss_dssp             CSCGGGCCHHHHHTS------CCCTHHHHHHHHHHHHHHHHS----------SCSCCCCCCSSSCHHHHHHHHHHHHHCS
T ss_pred             CCCCcccCChhhcCC------CCCcHHHHHHHHHHHHHHhhC----------CCCCCCCcccccCchHHHHHHHHHhcCC
Confidence            789999999999876      677899999999999999999          55665432221111  111111110000


Q ss_pred             CC---------------------CCCC-------------CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        384 RP---------------------VLPN-------------RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       384 ~~---------------------~~~~-------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+                     .+..             .-.+...+..+.+|+.+||+.||++|||+.|+++
T Consensus       318 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          318 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             CChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            00                     0000             0012456778999999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.3e-41  Score=323.29  Aligned_cols=253  Identities=23%  Similarity=0.385  Sum_probs=199.6

Q ss_pred             HHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        129 LIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       129 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ..+..+.++|++.+.||+|+||.||+|..  +++.||||++.....   .......|+..+..++||||+++++++... 
T Consensus        15 ~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   93 (287)
T 2wei_A           15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-   93 (287)
T ss_dssp             HHTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred             hHHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-
Confidence            34566678999999999999999999998  588999999865322   222334566667779999999999998765 


Q ss_pred             CcccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC---Cc
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GT  279 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~---~~  279 (443)
                         ...++||||+++++|.+++. ...+++..+..++.||+.||.|||+.        +|+||||||+||+++.+   +.
T Consensus        94 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dl~p~NIlv~~~~~~~~  162 (287)
T 2wei_A           94 ---SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--------NIVHRDLKPENILLESKEKDCD  162 (287)
T ss_dssp             ---SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEESCSSTTCC
T ss_pred             ---CeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCChhhEEEecCCCccc
Confidence               45899999999999998885 46799999999999999999999999        99999999999999764   47


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||++........     .....||+.|+|||.+.+       .++.++||||||+++|||++|          ..
T Consensus       163 ~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g----------~~  220 (287)
T 2wei_A          163 IKIIDFGLSTCFQQNTK-----MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSG----------TP  220 (287)
T ss_dssp             EEECSTTGGGTBCCCSS-----CSCHHHHHTTCCHHHHTT-------CCCTHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EEEeccCcceeecCCCc-----cccccCcccccChHHhcC-------CCCCchhhHhHHHHHHHHHhC----------CC
Confidence            99999999976543221     233468999999999865       356799999999999999999          66


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ||...     ....+...+.........+.   ...++.++.+++.+||+.||++|||+.|+++
T Consensus       221 p~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          221 PFYGK-----NEYDILKRVETGKYAFDLPQ---WRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             SSCCS-----SHHHHHHHHHHCCCCCCSGG---GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCC-----CHHHHHHHHHcCCCCCCchh---hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            77653     22333333332222222221   1235678999999999999999999999987

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=6.5e-42  Score=347.49  Aligned_cols=264  Identities=22%  Similarity=0.275  Sum_probs=199.3

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC-ccchHHHHHHHHHHhccCCCcee-eeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD-EASWSRETEIYSTVLLRHENILG-YIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H~nIv~-l~g~~~~~~~~~~~~  209 (443)
                      +.++|.+.+.||+|+||.||+|.+  +++.||||++.... ......|.+++..  ++|++++. +..++...    ...
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~--L~~~~~i~~i~~~~~~~----~~~   78 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRI--LQGGTGIPNVRWFGVEG----DYN   78 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHH--TTTSTTCCCEEEEEEET----TEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHH--hcCCCCCCeEEEEEeeC----CEE
Confidence            347899999999999999999997  58999999876543 2344555555544  77755444 44443333    457


Q ss_pred             EeeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE---cCCCcEEEEe
Q psy14889        210 WLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIAD  284 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl---~~~~~~kl~D  284 (443)
                      +|||||+ +++|.+++.  ...+++..++.++.||+.||.|||+.        +|+||||||+||||   +.++.+||+|
T Consensus        79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--------gIvHrDIKP~NILl~~~~~~~~vkL~D  149 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--------SFLHRDIKPDNFLMGLGRRANQVYIID  149 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred             EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CEeecccCcceEEEecCCCCCeEEEEe
Confidence            9999999 899999997  56799999999999999999999999        99999999999999   6889999999


Q ss_pred             cCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        285 FGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       285 fGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      ||+++.+........   .......||..|+|||++.+.      .++.++|||||||+||||++|          ..||
T Consensus       150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~s~~sDvwSlGvil~elltG----------~~Pf  213 (483)
T 3sv0_A          150 FGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI------EQSRRDDLESLGYVLMYFLRG----------SLPW  213 (483)
T ss_dssp             CTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCTT
T ss_pred             CCcceeccCCccccccccccccccCCCccccCHHHhcCC------CCChHHHHHHHHHHHHHHHhC----------CCCC
Confidence            999987765433221   112356799999999999876      677899999999999999999          7777


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      .+..... ....+....... ......  .....++.++.+|+..||+.||++||++.+|++.|+++....
T Consensus       214 ~~~~~~~-~~~~~~~i~~~~-~~~~~~--~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          214 QGLKAGT-KKQKYEKISEKK-VATSIE--ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             SSCCCSS-HHHHHHHHHHHH-HHSCHH--HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccccchh-HHHHHHHHhhcc-ccccHH--HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            7643211 111222211110 000000  000224578999999999999999999999999999987643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=8.3e-42  Score=359.58  Aligned_cols=257  Identities=21%  Similarity=0.404  Sum_probs=200.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCC
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRN  204 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~  204 (443)
                      +...++|++.+.||+|+||.||+|.+.     +..||||.+.......  .....|+..+..++||||+++++++.+.  
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--  463 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN--  463 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC--
Confidence            334578999999999999999999983     3469999876433221  2234566666679999999999998543  


Q ss_pred             cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                         ..++||||+++|+|.+++..  ..+++..++.++.|++.||.|||+.        +|+||||||+|||++.++.+||
T Consensus       464 ---~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givHrDikp~NILl~~~~~vkL  532 (656)
T 2j0j_A          464 ---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--------RFVHRDIAARNVLVSSNDCVKL  532 (656)
T ss_dssp             ---SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEE
T ss_pred             ---ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccccchHhEEEeCCCCEEE
Confidence               36899999999999999974  3689999999999999999999999        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPY  361 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~  361 (443)
                      +|||+++........   ......+|+.|+|||++.+.      .++.++||||||+++|||++ |          ..||
T Consensus       533 ~DFG~a~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~ellt~g----------~~Pf  593 (656)
T 2j0j_A          533 GDFGLSRYMEDSTYY---KASKGKLPIKWMAPESINFR------RFTSASDVWMFGVCMWEILMHG----------VKPF  593 (656)
T ss_dssp             CCCCCCCSCCC-------------CCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTT
T ss_pred             EecCCCeecCCCcce---eccCCCCCcceeCHHHhcCC------CCCchhhHHHHHHHHHHHHHcC----------CCCC
Confidence            999999876543211   12234577899999999766      67789999999999999997 7          6677


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      .+.     ...+....+.. ..++..+     ..++..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       594 ~~~-----~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          594 QGV-----KNNDVIGRIEN-GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             TTC-----CHHHHHHHHHH-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-----CHHHHHHHHHc-CCCCCCC-----ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            653     22333333322 2233333     34667899999999999999999999999999998764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.5e-41  Score=334.86  Aligned_cols=254  Identities=23%  Similarity=0.303  Sum_probs=184.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--ccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~  207 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++......   ......|+..+..++||||+++++++.....  ...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            37899999999999999999987  5889999998653221   1222356666667999999999999876531  223


Q ss_pred             EEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      .+++||||+. |+|.+++. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+
T Consensus       104 ~~~lv~e~~~-~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--------~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGL  173 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ceEEEEEcCC-CCHHHHHh-hccCHHHHHHHHHHHHHHHHHHHHC--------CeecccCCHHHEEEcCCCCEEEEEeec
Confidence            6899999998 48888885 4699999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++......     ......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+..  
T Consensus       174 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~~pf~~~~--  230 (371)
T 2xrw_A          174 ARTAGTSF-----MMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKG----------GVLFPGTD--  230 (371)
T ss_dssp             ---------------------CTTCCHHHHTTC------CCCTTHHHHHHHHHHHHHHHS----------SCSSCCSS--
T ss_pred             cccccccc-----ccCCceecCCccCHHHhcCC------CCCchHhHHHHHHHHHHHHhC----------CCCCCCCC--
Confidence            97654321     12345799999999999876      677899999999999999999          55665421  


Q ss_pred             CCChHHHHhhhhhcC-------------------CCCCCCCC---------C------CCchhHHHHHHHHHHHhcCCcC
Q psy14889        368 DPSFDDMRKVICIDQ-------------------QRPVLPNR---------W------VSDSTLNAMTKVMKECWHQNAN  413 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~-------------------~~~~~~~~---------~------~~~~~~~~l~~li~~cl~~dP~  413 (443)
                        ..+.+...+....                   ..+.....         .      .....+..+.+|+.+||+.||+
T Consensus       231 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  308 (371)
T 2xrw_A          231 --HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS  308 (371)
T ss_dssp             --HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGG
T ss_pred             --HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChh
Confidence              1111111110000                   01111000         0      0012367899999999999999


Q ss_pred             CCCcHHHHHH
Q psy14889        414 VRLSALRVKK  423 (443)
Q Consensus       414 ~Rps~~evl~  423 (443)
                      +|||+.|+++
T Consensus       309 ~R~t~~e~l~  318 (371)
T 2xrw_A          309 KRISVDEALQ  318 (371)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCCCHHHHhC
Confidence            9999999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.9e-42  Score=340.55  Aligned_cols=255  Identities=21%  Similarity=0.307  Sum_probs=176.3

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|++.+.||+|+||.||+|..  +|+.||||++......   ......|+..+..++||||+++++++.....  ..
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            447899999999999999999987  6889999998653221   1222356666667999999999999865421  12


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++|+||+ +++|.+++....+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA--------DIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeCCCCHhhEEECCCCCEEEeecc
Confidence            3479999999 58999999888899999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.....       .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+.. 
T Consensus       178 ~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~ell~g----------~~pf~~~~-  234 (367)
T 2fst_X          178 LARHTADE-------MTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG----------RTLFPGTD-  234 (367)
T ss_dssp             --------------------CCCTTCCHHHHTTCC-----SCCTTHHHHHHHHHHHHHHHS----------SCSCCCSS-
T ss_pred             cccccccc-------CCCcCcCcCccChHHHcCCc-----CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            99765432       23457899999999987631     567899999999999999999          55665431 


Q ss_pred             CCCChHHHHhhhhhcC--------------------CCCCCCCCC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQ--------------------QRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ..+.+..+.....                    ..+..+...   .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       235 ---~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          235 ---HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             ---HHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence               1111111111000                    001111100   00124567999999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.3e-41  Score=324.04  Aligned_cols=251  Identities=21%  Similarity=0.324  Sum_probs=193.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC-----ccchHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD-----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~-----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|.+.+.||+|+||.||++..  +++.||+|++....     ........|+..+..++||||+++++++.....  .
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~   81 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK--Q   81 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC--C
Confidence            47899999999999999999998  57899999986532     122333566777777999999999999854432  4


Q ss_pred             EEEeeecccCcccHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        208 QLWLVTHYHSFGSLYDHLN---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      ..++||||+.+| |.+++.   ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--------~i~H~dlkp~NIl~~~~~~~kl~d  152 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ--------GIVHKDIKPGNLLLTTGGTLKISA  152 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEEECC
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCCcccEEEcCCCcEEeec
Confidence            579999999976 666664   35799999999999999999999999        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++..........  ......||+.|+|||++.+...    ..+.++||||||+++|||++|          ..||...
T Consensus       153 fg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----~~~~~~Di~slG~il~~l~~g----------~~p~~~~  216 (305)
T 2wtk_C          153 LGVAEALHPFAADD--TCRTSQGSPAFQPPEIANGLDT----FSGFKVDIWSAGVTLYNITTG----------LYPFEGD  216 (305)
T ss_dssp             CTTCEECCTTCSSC--EECCCCSCGGGCCHHHHTCCSC----EESHHHHHHHHHHHHHHHHHS----------SCSCCCS
T ss_pred             cccccccCcccccc--ccccCCCCCCCcChhhccCccc----CCcchhhHHHHHHHHHHHHhC----------CCCCCCc
Confidence            99997665322111  1134468999999999875411    235689999999999999999          6677653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                           ........+...  ...++     ..++..+.+++.+||+.||++|||+.|+++.
T Consensus       217 -----~~~~~~~~i~~~--~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          217 -----NIYKLFENIGKG--SYAIP-----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -----SHHHHHHHHHHC--CCCCC-----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -----hHHHHHHHHhcC--CCCCC-----CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                 223333333221  22222     3356789999999999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.1e-41  Score=342.65  Aligned_cols=259  Identities=24%  Similarity=0.325  Sum_probs=181.7

Q ss_pred             hhccccccceeeeecCeEEEEE-EECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        134 LAKQISLSECIGKGRYGEVWRG-VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~-~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.+.|...+.||+|+||+||.+ ..+|+.||||++..........|.+++... .+||||+++++++.+.    ..+++|
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l-~~HpnIv~~~~~~~~~----~~~~lv   87 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTES-DDHPNVIRYYCSETTD----RFLYIA   87 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHH-TTSTTBCCEEEEEECS----SEEEEE
T ss_pred             hhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhc-cCCCCcCeEEEEEecC----CeEEEE
Confidence            3456777889999999999654 458999999998765444444454444331 4899999999998765    468999


Q ss_pred             ecccCcccHHHHhcccCC--------CHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-------
Q psy14889        213 THYHSFGSLYDHLNRTTL--------NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-------  277 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l--------~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-------  277 (443)
                      |||+. |+|.+++.....        ++..++.++.||+.||+|||+.        +|+||||||+|||++.+       
T Consensus        88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDLkp~NILl~~~~~~~~~~  158 (434)
T 2rio_A           88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQ  158 (434)
T ss_dssp             ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEECCHHHHSCC
T ss_pred             EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC--------CccccCCChHhEEEecCccccccc
Confidence            99996 699999975432        2334578999999999999999        99999999999999754       


Q ss_pred             ------CcEEEEecCCcccccccCCcCCCCCCCcccccCccccccccccccc-CcCCCCCccchHHHHHHHHHHHh-ccc
Q psy14889        278 ------GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-DCFESFKKADIYALGLVLWEVCR-RTK  349 (443)
Q Consensus       278 ------~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~sDvwS~Gvvl~ellt-g~~  349 (443)
                            +.+||+|||+++.................||+.|+|||++.+.... ....++.++|||||||++|||+| |  
T Consensus       159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g--  236 (434)
T 2rio_A          159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG--  236 (434)
T ss_dssp             TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTS--
T ss_pred             ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCC--
Confidence                  4899999999987765332222122345799999999999763210 01267789999999999999999 7  


Q ss_pred             CCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        350 ANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       350 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                              ..||.+...     .. ..........+.. .......++.++.+|+.+||+.||++|||+.++++
T Consensus       237 --------~~Pf~~~~~-----~~-~~i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          237 --------KHPFGDKYS-----RE-SNIIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             --------CCTTCSTTT-----HH-HHHHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------CCCCCCchh-----hH-HHHhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                    667754321     11 1121111111111 11223457789999999999999999999999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.4e-41  Score=329.88  Aligned_cols=251  Identities=20%  Similarity=0.257  Sum_probs=189.6

Q ss_pred             hhhccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCccchHHHHHHHHHHhccCC------CceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVLLRHE------NILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~------nIv~l~g~~~~~~  203 (443)
                      .+.++|++.+.||+|+||.||+|..   +++.||||++............|+..+..++|+      +|+++++++... 
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-   89 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-   89 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET-
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC-
Confidence            4457999999999999999999987   478999999865433323334455555546655      499999998766 


Q ss_pred             CcccEEEeeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC----
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----  276 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~----  276 (443)
                         ..+++||||+ +++|.+++...   .+++..+..++.||+.||+|||+.        +|+||||||+|||++.    
T Consensus        90 ---~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dlkp~Nil~~~~~~~  157 (339)
T 1z57_A           90 ---GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN--------KLTHTDLKPENILFVQSDYT  157 (339)
T ss_dssp             ---TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESCCCEE
T ss_pred             ---CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC--------CCcCCCCCHHHEEEeccccc
Confidence               4689999999 78999999653   589999999999999999999999        9999999999999987    


Q ss_pred             ---------------CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHH
Q psy14889        277 ---------------NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL  341 (443)
Q Consensus       277 ---------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl  341 (443)
                                     ++.+||+|||+++.....       .....||+.|+|||++.+.      .++.++|||||||++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il  224 (339)
T 1z57_A          158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------HSTLVSTRHYRAPEVILAL------GWSQPCDVWSIGCIL  224 (339)
T ss_dssp             EEEC----CEEEEESCCCEEECCCSSCEETTSC-------CCSSCSCGGGCCHHHHTTS------CCCTHHHHHHHHHHH
T ss_pred             cccCCccccccccccCCCceEeeCcccccCccc-------cccccCCccccChHHhhCC------CCCcchhhHHHHHHH
Confidence                           668999999999764432       1345789999999999876      677899999999999


Q ss_pred             HHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcC------------------------------------CCC
Q psy14889        342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ------------------------------------QRP  385 (443)
Q Consensus       342 ~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~  385 (443)
                      |||++|          ..||....    ..+..........                                    ..+
T Consensus       225 ~el~~g----------~~pf~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
T 1z57_A          225 IEYYLG----------FTVFPTHD----SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP  290 (339)
T ss_dssp             HHHHHS----------SCSCCCSC----HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC
T ss_pred             HHHHhC----------CCCCCCCC----hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcc
Confidence            999999          55554321    0111111000000                                    000


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        386 VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       386 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...........+..+.+|+.+||+.||++|||+.|+++
T Consensus       291 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence            00001112456788999999999999999999999875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.2e-41  Score=334.13  Aligned_cols=260  Identities=24%  Similarity=0.338  Sum_probs=188.0

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccc------------hHHHHHHHHHHhccCCCceeeee
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEAS------------WSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~------------~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      ...+.++|++.+.||+|+||.||+|.. +|+.||||++.......            .....|+..+..++||||+++++
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            345568999999999999999999987 68999999885432110            23345666666799999999999


Q ss_pred             eccccC-CcccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        198 SDMTSR-NSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       198 ~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      ++.... .....+++||||+. |+|.+++..  ..+++..+..++.||+.||.|||+.        +|+||||||+|||+
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~Dlkp~NIl~  167 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA--------GVVHRDLHPGNILL  167 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEE
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--------cCEecCCChHHEEE
Confidence            986533 22346899999998 688888864  3699999999999999999999999        99999999999999


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcc
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF  354 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~  354 (443)
                      +.++.+||+|||+++.......     .....||+.|+|||++.+..     .++.++|||||||++|||++|       
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~l~~g-------  230 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTADAN-----KTHYVTHRWYRAPELVMQFK-----GFTKLVDMWSAGCVMAEMFNR-------  230 (362)
T ss_dssp             CTTCCEEECCTTC--------------------CGGGCCHHHHTTCT-----TCCTHHHHHHHHHHHHHHHHS-------
T ss_pred             cCCCCEEEEecCcccccccccc-----cceecccceecCcHHhcCCC-----CCCcHhHHHhHHHHHHHHHhC-------
Confidence            9999999999999975443221     23457899999999987631     566899999999999999999       


Q ss_pred             cccCCCCCCCCCCCCChHHHHhhhhhc---------------------CCCCCCCCC-C--CCchhHHHHHHHHHHHhcC
Q psy14889        355 EEYKAPYHDLVPMDPSFDDMRKVICID---------------------QQRPVLPNR-W--VSDSTLNAMTKVMKECWHQ  410 (443)
Q Consensus       355 ~~~~~P~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~  410 (443)
                         ..||....    ..+.+.......                     ......+.. +  .....+..+.+|+.+||+.
T Consensus       231 ---~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  303 (362)
T 3pg1_A          231 ---KALFRGST----FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF  303 (362)
T ss_dssp             ---SCSCCCSS----HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             ---CCCCCCCC----HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence               56665421    111111111100                     000011100 0  1123456799999999999


Q ss_pred             CcCCCCcHHHHHH
Q psy14889        411 NANVRLSALRVKK  423 (443)
Q Consensus       411 dP~~Rps~~evl~  423 (443)
                      ||++|||+.|+++
T Consensus       304 dP~~Rpt~~ell~  316 (362)
T 3pg1_A          304 NPQRRISTEQALR  316 (362)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             ChhhCCCHHHHHc
Confidence            9999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4e-42  Score=333.59  Aligned_cols=253  Identities=24%  Similarity=0.348  Sum_probs=190.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccch---HHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASW---SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~---~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||||++........   ....|+..+..++||||+++++++.+.    ...+
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~  100 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK----KRWY  100 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC----CEEE
Confidence            6899999999999999999998  488999998865443321   223566667779999999999998766    4589


Q ss_pred             eeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +||||+++++|.+++. ...+++..+..++.|++.||.|||+.        +|+||||||+|||++.++.+||+|||+++
T Consensus       101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--------~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  172 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--------NIIHRDIKPENILVSQSGVVKLCDFGFAR  172 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred             EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------CEEccCcChheEEEcCCCcEEEEeCCCce
Confidence            9999999999998865 46799999999999999999999999        99999999999999999999999999997


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||....    
T Consensus       173 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~g----------~~pf~~~~----  229 (331)
T 4aaa_A          173 TLAAPGEV----YDDEVATRWYRAPELLVGDV-----KYGKAVDVWAIGCLVTEMFMG----------EPLFPGDS----  229 (331)
T ss_dssp             ---------------CCCCCTTCCHHHHTTCT-----TCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS----
T ss_pred             eecCCccc----cCCCcCCccccCcccccCCC-----CcchHHHHHHHHHHHHHHHhC----------CCCCCCCC----
Confidence            66543221    13347899999999987642     456899999999999999999          56665431    


Q ss_pred             ChHHHHhhhhhc-------------------CCCCCCCCCC----CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICID-------------------QQRPVLPNRW----VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~-------------------~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.........                   ...+......    ....++..+.+|+.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          230 DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111111111100                   0001110000    01235678999999999999999999999886

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.4e-41  Score=337.63  Aligned_cols=252  Identities=21%  Similarity=0.284  Sum_probs=189.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC--cccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~~~l  211 (443)
                      .+|++.+.||+|+||.||+|++  +|+.||||++..... ...+  |+..+..++||||+++++++.....  ....+++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~--E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKNR--ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-SCCH--HHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-hHHH--HHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            5799999999999999999998  589999998865332 2233  4555556999999999999865322  2245789


Q ss_pred             eecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcEEEEec
Q psy14889        212 VTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADF  285 (443)
Q Consensus       212 v~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~kl~Df  285 (443)
                      ||||+++ +|.+.+.     ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.+ +.+||+||
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~NILl~~~~~~~kl~DF  201 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--------GICHRDIKPQNLLLDPDTAVLKLCDF  201 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--------TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCChhhEEEeCCCCeEEeccc
Confidence            9999985 6766653     36799999999999999999999998        99999999999999965 57899999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.+.....     .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+..
T Consensus       202 G~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~ell~G----------~~pf~~~~  261 (420)
T 1j1b_A          202 GSAKQLVRGEP-----NVSYICSRYYRAPELIFGAT-----DYTSSIDVWSAGCVLAELLLG----------QPIFPGDS  261 (420)
T ss_dssp             TTCEECCTTCC-----CCSCCSCTTSCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHS----------SCSSCCSS
T ss_pred             hhhhhcccCCC-----ceeeeeCCCcCCHHHHcCCC-----CCCchhhhHHHHHHHHHHHhC----------CCCCCCCC
Confidence            99987643221     23457899999999987541     466899999999999999999          66776531


Q ss_pred             CCCCChHHHHhhhhh--------------cCCCCCCCCC----C---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICI--------------DQQRPVLPNR----W---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~----~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ..+.+.+++..              ......++..    |   .....+.++.+|+.+||+.||++|||+.|+++
T Consensus       262 ----~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          262 ----GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             ----HHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----HHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                11222222211              0011111110    0   11235678999999999999999999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.1e-41  Score=332.03  Aligned_cols=259  Identities=19%  Similarity=0.219  Sum_probs=182.2

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC---cc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN---SC  206 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~---~~  206 (443)
                      ....++|++.+.||+|+||.||+|.+  +|+.||||++............++..+..++||||+++++++.....   ..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            34447899999999999999999998  58899999886654443344455555566899999999999865332   12


Q ss_pred             cEEEeeecccCcccHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHH--HchhcCCCCCCeEEeCCCCCCEEEcC-CC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLN-----RTTLNHHQMMKICLSIVNGLVHLH--TEIFGTQGKPAIAHRDIKSKNILVKT-NG  278 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~-----~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~~~~~~iiHrDlk~~NiLl~~-~~  278 (443)
                      ..+++||||+++ +|.+.+.     ...+++..+..++.|++.||.|||  +.        +|+||||||+|||++. ++
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~--------~ivH~Dlkp~NIll~~~~~  169 (360)
T 3e3p_A           99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV--------NVCHRDIKPHNVLVNEADG  169 (360)
T ss_dssp             EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT--------CCBCSCCCGGGEEEETTTT
T ss_pred             eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC--------CeecCcCCHHHEEEeCCCC
Confidence            347899999986 5544432     356899999999999999999999  66        9999999999999997 89


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+++.......     .....||+.|+|||++.+..     .++.++|||||||++|||++|          .
T Consensus       170 ~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-----~~~~~~Di~slG~il~ell~g----------~  229 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEP-----NVAYICSRYYRAPELIFGNQ-----HYTTAVDIWSVGCIFAEMMLG----------E  229 (360)
T ss_dssp             EEEECCCTTCBCCCTTSC-----CCSTTSCGGGCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHS----------S
T ss_pred             cEEEeeCCCceecCCCCC-----cccccCCcceeCHHHHcCCC-----CCCcHHHHHHHHHHHHHHHhC----------C
Confidence            999999999987654322     23457899999999986541     467899999999999999999          6


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCC--------------------CCC--C--CCCCchhHHHHHHHHHHHhcCCcCC
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRP--------------------VLP--N--RWVSDSTLNAMTKVMKECWHQNANV  414 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--~--~~~~~~~~~~l~~li~~cl~~dP~~  414 (443)
                      .||....    ....+..........+                    ..+  .  .......+.++.+|+.+||+.||.+
T Consensus       230 ~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  305 (360)
T 3e3p_A          230 PIFRGDN----SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEE  305 (360)
T ss_dssp             CSSCCSS----HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGG
T ss_pred             CCcCCCC----hHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccc
Confidence            6665531    1112222211000000                    000  0  0011225678999999999999999


Q ss_pred             CCcHHHHHH
Q psy14889        415 RLSALRVKK  423 (443)
Q Consensus       415 Rps~~evl~  423 (443)
                      |||+.|+++
T Consensus       306 Rpt~~e~l~  314 (360)
T 3e3p_A          306 RMKPYEALC  314 (360)
T ss_dssp             SCCHHHHTT
T ss_pred             cCCHHHHhc
Confidence            999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.6e-41  Score=322.73  Aligned_cols=256  Identities=21%  Similarity=0.358  Sum_probs=189.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC--------
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN--------  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--------  204 (443)
                      .++|++.+.||+|+||.||+|..  +++.||||++............|+..+..++||||+++++++.+...        
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            46899999999999999999997  68999999986543333334567777777999999999998765321        


Q ss_pred             -cccEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        205 -SCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       205 -~~~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                       ....+++||||+++|+|.+++..  ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.+|
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dlkp~Nil~~~~~~~k  156 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ--------GIIHRDLKPMNIFIDESRNVK  156 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEE
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC--------CeecccCCHHhEEEcCCCCEE
Confidence             12568999999999999999964  4578899999999999999999999        999999999999999999999


Q ss_pred             EEecCCcccccccCCcC----------CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        282 IADFGLAVSYSQLSNKM----------DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      |+|||++..........          ........||+.|+|||++.+..     .++.++||||||+++|||+++    
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~p----  227 (303)
T 1zy4_A          157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG-----HYNEKIDMYSLGIIFFEMIYP----  227 (303)
T ss_dssp             ECCCCCCSCTTC-------------------------CTTSCHHHHTSCS-----CCCTHHHHHHHHHHHHHHHSC----
T ss_pred             EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCC-----CCcchhhHHHHHHHHHHHHhc----
Confidence            99999997664321100          01123456899999999987531     466899999999999999973    


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                               |....    ........+.  .....++.. .....+..+.+++.+||+.||++|||+.++++
T Consensus       228 ---------~~~~~----~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          228 ---------FSTGM----ERVNILKKLR--SVSIEFPPD-FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             ---------CSSHH----HHHHHHHHHH--STTCCCCTT-CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------cCCch----hHHHHHHhcc--ccccccCcc-ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence                     21100    0111112111  122223322 22446678999999999999999999999986

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.1e-42  Score=343.85  Aligned_cols=251  Identities=13%  Similarity=0.141  Sum_probs=181.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc----cchHHHHHH---HHHHhccCCCceeeeeec------
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE----ASWSRETEI---YSTVLLRHENILGYIGSD------  199 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~----~~~~~e~ei---~~~~~l~H~nIv~l~g~~------  199 (443)
                      .++|.+.+.||+|+||.||+|.+  +|+.||||++.....    .......|+   ..+..++|||||++++.+      
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            36899999999999999999996  589999999864321    112223455   334446899999998443      


Q ss_pred             -cccCC----------cc---cEEEeeecccCcccHHHHhcc-cCCC-------HHHHHHHHHHHHHHHHHHHHchhcCC
Q psy14889        200 -MTSRN----------SC---TQLWLVTHYHSFGSLYDHLNR-TTLN-------HHQMMKICLSIVNGLVHLHTEIFGTQ  257 (443)
Q Consensus       200 -~~~~~----------~~---~~~~lv~e~~~~gsL~~~l~~-~~l~-------~~~~~~i~~qia~gL~yLH~~~~~~~  257 (443)
                       .+...          ..   ...++||||+ +|+|.+++.. ..++       +..++.++.||+.||+|||+.     
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----  225 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-----  225 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-----
Confidence             32211          00   0268999999 5899999964 3344       488889999999999999999     


Q ss_pred             CCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCccccccccccc-----ccCcCCCCCcc
Q psy14889        258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESI-----NMDCFESFKKA  332 (443)
Q Consensus       258 ~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~s  332 (443)
                         +|+||||||+|||++.++.+||+|||+++......       ....| +.|+|||++.+..     ......++.++
T Consensus       226 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~  294 (377)
T 3byv_A          226 ---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-------VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF  294 (377)
T ss_dssp             ---TEECSCCCGGGEEECTTCCEEECCGGGCEETTCEE-------ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred             ---CeecCCCCHHHEEEcCCCCEEEEechhheecCCcc-------cCCCC-cCccChhhhcccccccccccccccCChhh
Confidence               99999999999999999999999999997543311       23467 8999999997640     00001456899


Q ss_pred             chHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCc
Q psy14889        333 DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNA  412 (443)
Q Consensus       333 DvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  412 (443)
                      |||||||++|||++|          ..||........    .....   ...         ..++.++.+|+.+||+.||
T Consensus       295 DvwSlG~il~elltg----------~~Pf~~~~~~~~----~~~~~---~~~---------~~~~~~~~~li~~~L~~dp  348 (377)
T 3byv_A          295 DAWALGLVIYWIWCA----------DLPITKDAALGG----SEWIF---RSC---------KNIPQPVRALLEGFLRYPK  348 (377)
T ss_dssp             HHHHHHHHHHHHHHS----------SCCC------CC----SGGGG---SSC---------CCCCHHHHHHHHHHTCSSG
T ss_pred             hHHHHHHHHHHHHHC----------CCCCcccccccc----hhhhh---hhc---------cCCCHHHHHHHHHHcCCCc
Confidence            999999999999999          667655321111    01110   000         2255789999999999999


Q ss_pred             CCCCcHHHHHH--HHHHH
Q psy14889        413 NVRLSALRVKK--TLIKL  428 (443)
Q Consensus       413 ~~Rps~~evl~--~L~~l  428 (443)
                      ++|||+.|+++  .++++
T Consensus       349 ~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          349 EDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             GGCCCHHHHHTSHHHHHH
T ss_pred             hhCCCHHHHhhChHHHHH
Confidence            99999999986  44443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.9e-41  Score=336.80  Aligned_cols=255  Identities=18%  Similarity=0.266  Sum_probs=189.1

Q ss_pred             hhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC--cccEEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~~~  210 (443)
                      ...+|++.+.||+|+||.||+|++ .+..||+|++..... ...+  |+..+..++||||+++++++.....  ....++
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-~~~~--E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-FKNR--ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-SCCH--HHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-hHHH--HHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            346799999999999999999998 556699998754332 2223  4455555999999999999865432  224478


Q ss_pred             eeecccCcccHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc-CCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK-TNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~-~~~~~kl~Df  285 (443)
                      +||||++++.+.....    ...+++..+..++.||+.||+|||+.        +|+||||||+|||++ .++.+||+||
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--------~ivHrDlkp~Nill~~~~~~~kL~DF  186 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--------GICHRDIKPQNLLLDPPSGVLKLIDF  186 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CccCCCCCHHHEEEcCCCCcEEEeeC
Confidence            9999998754433322    46799999999999999999999999        999999999999999 7899999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.......     .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.+..
T Consensus       187 G~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~ell~g----------~~pf~~~~  246 (394)
T 4e7w_A          187 GSAKILIAGEP-----NVSYICSRYYRAPELIFGAT-----NYTTNIDIWSTGCVMAELMQG----------QPLFPGES  246 (394)
T ss_dssp             TTCEECCTTCC-----CCSSCSCGGGCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHS----------SCSSCCSS
T ss_pred             CCcccccCCCC-----CcccccCcCccCHHHHcCCC-----CCCcHHHHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            99987644322     23457899999999987642     467899999999999999999          66776531


Q ss_pred             CCCCChHHHHhhhhh--------------cCCCCCCCCC-------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICI--------------DQQRPVLPNR-------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ..+.+..++..              ......++..       ......+.++.+|+.+||+.||++|||+.|+++
T Consensus       247 ----~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          247 ----GIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             ----HHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ----HHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence                11122221110              0001111110       011235678999999999999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-41  Score=328.00  Aligned_cols=261  Identities=21%  Similarity=0.233  Sum_probs=188.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccC-------
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSR-------  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~-------  203 (443)
                      +.++|.+.+.||+|+||.||+|..  +++.||||++....... .....|+..+..++||||+++++++....       
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            457899999999999999999998  48899999886554322 23346677777799999999999875432       


Q ss_pred             ---CcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc-CCCc
Q psy14889        204 ---NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK-TNGT  279 (443)
Q Consensus       204 ---~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~-~~~~  279 (443)
                         ......++||||+. |+|.+++.+..+++..+..++.|++.||+|||+.        +|+||||||+|||++ +++.
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA--------NVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCSGGGEEEETTTTE
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC--------CEecCCCCHHHEEEcCCCCe
Confidence               11246899999998 6999999988999999999999999999999999        999999999999997 5679


Q ss_pred             EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        280 CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       280 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      +||+|||+++......... .......+|..|+|||.+.+..     .++.++||||||+++|||++|          ..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~il~el~~g----------~~  223 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHK-GHLSEGLVTKWYRSPRLLLSPN-----NYTKAIDMWAAGCIFAEMLTG----------KT  223 (320)
T ss_dssp             EEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTT-----CCCHHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EEEccCccccccCCCcccc-cccccccccccccCcHHhcCcc-----cCCchhhhHhHHHHHHHHHhC----------CC
Confidence            9999999998765322111 1123346789999999886531     566899999999999999999          66


Q ss_pred             CCCCCCCCCCChHHHHhhhhhc----------------------CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        360 PYHDLVPMDPSFDDMRKVICID----------------------QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      ||....    ..+.+.......                      ...+..+.......++.++.+++.+||+.||++|||
T Consensus       224 pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  299 (320)
T 2i6l_A          224 LFAGAH----ELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT  299 (320)
T ss_dssp             SSCCSS----HHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCCCCC----HHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence            665431    111111111100                      000110000001235678999999999999999999


Q ss_pred             HHHHHH
Q psy14889        418 ALRVKK  423 (443)
Q Consensus       418 ~~evl~  423 (443)
                      +.|+++
T Consensus       300 ~~ell~  305 (320)
T 2i6l_A          300 AEEALS  305 (320)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=5e-42  Score=331.55  Aligned_cols=253  Identities=21%  Similarity=0.282  Sum_probs=190.5

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---------cchHHHHHHHHHHhccCCCceeeeeeccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---------ASWSRETEIYSTVLLRHENILGYIGSDMT  201 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~  201 (443)
                      .+.++|.+.+.||+|+||.||+|..  +++.||||++.....         .....+.|+..+..++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            3457899999999999999999998  578999998854321         11123456666666999999999999865


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc-
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-  279 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~-  279 (443)
                      ..     .++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++. 
T Consensus        87 ~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~ivH~dlkp~NIl~~~~~~~  153 (322)
T 2ycf_A           87 ED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEED  153 (322)
T ss_dssp             SS-----EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESSSSSS
T ss_pred             Cc-----eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeccCCCHHHEEEecCCCC
Confidence            42     6999999999999998864 5799999999999999999999999        9999999999999987664 


Q ss_pred             --EEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCccccc
Q psy14889        280 --CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEY  357 (443)
Q Consensus       280 --~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~  357 (443)
                        +||+|||+++........     ....||+.|+|||++.....   ..++.++|||||||++|||++|          
T Consensus       154 ~~~kl~Dfg~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~~l~~g----------  215 (322)
T 2ycf_A          154 CLIKITDFGHSKILGETSLM-----RTLCGTPTYLAPEVLVSVGT---AGYNRAVDCWSLGVILFICLSG----------  215 (322)
T ss_dssp             CCEEECCCTTCEECCCCHHH-----HHHHSCCTTCCHHHHHHTTT---TTCTTHHHHHHHHHHHHHHHHS----------
T ss_pred             CeEEEccCccceeccccccc-----ccccCCcCccCchhhccCCC---CCCCchhhHHHHHHHHHHHHhC----------
Confidence              999999999766432111     12368999999999753111   1567899999999999999999          


Q ss_pred             CCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       358 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..||.......    .+...+... .....+..  ....+..+.+++.+||+.||++|||+.++++
T Consensus       216 ~~pf~~~~~~~----~~~~~~~~~-~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          216 YPPFSEHRTQV----SLKDQITSG-KYNFIPEV--WAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             SCSSCSTTCSS----CHHHHHHHT-CCCCCHHH--HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCcccchHH----HHHHHHHhC-ccccCchh--hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            66776532211    112222111 11111110  1224578999999999999999999999984

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.7e-42  Score=329.87  Aligned_cols=257  Identities=26%  Similarity=0.373  Sum_probs=181.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ..++|.+.+.||+|+||.||+|..  +++.||||++......  ......|+..+..++||||+++++++....    ..
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~   88 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD----EL   88 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS----CE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC----Cc
Confidence            347899999999999999999987  6899999987543221  122235566666689999999999988764    47


Q ss_pred             EeeecccCcccHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcE
Q psy14889        210 WLVTHYHSFGSLYDHLNR---------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC  280 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~  280 (443)
                      ++||||+++|+|.+++..         ..+++..+..++.||+.||.|||+.        +|+||||||+||+++.++.+
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dl~p~Nil~~~~~~~  160 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN--------GQIHRDVKAGNILLGEDGSV  160 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEECTTCCE
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC--------CCCCCCCChhhEEEcCCCCE
Confidence            999999999999999852         4589999999999999999999999        99999999999999999999


Q ss_pred             EEEecCCcccccccCCcC-CCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCC
Q psy14889        281 VIADFGLAVSYSQLSNKM-DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA  359 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~  359 (443)
                      ||+|||++.......... ........||+.|+|||++.+..     .++.++||||||+++|||++|          ..
T Consensus       161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~Di~slG~il~~l~~g----------~~  225 (303)
T 2vwi_A          161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR-----GYDFKADIWSFGITAIELATG----------AA  225 (303)
T ss_dssp             EECCCHHHHHCC---------------CCCTTCCHHHHHHHH-----CCCTHHHHHHHHHHHHHHHHS----------SC
T ss_pred             EEEeccchheeccCCCccchhhhcccCCCccccCHHHhcccc-----CCCchhhHHHHHHHHHHHHhC----------CC
Confidence            999999987654322111 11123457899999999987531     456899999999999999999          66


Q ss_pred             CCCCCCCCCCChHHHHhhhhhcCCCCCCCC----CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPN----RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       360 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ||.....    .........  ...+..+.    .......+.++.+++.+||+.||.+|||+.++++
T Consensus       226 pf~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          226 PYHKYPP----MKVLMLTLQ--NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TTTTSCG----GGHHHHHHT--SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCccCch----hhHHHHHhc--cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            6655321    111111111  11111111    0111335678999999999999999999999986

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.2e-41  Score=333.69  Aligned_cols=256  Identities=20%  Similarity=0.331  Sum_probs=190.2

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCc--
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNS--  205 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~--  205 (443)
                      .+.++|.+.+.||+|+||.||+|..  +|+.||||++.......   .....|+..+..++||||+++++++......  
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            3557899999999999999999987  58999999986543221   2234566666679999999999998765432  


Q ss_pred             ccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        206 CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       206 ~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ...+++||||+. |+|.+++.. .+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus       119 ~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dikp~NIll~~~~~~kL~Df  188 (371)
T 4exu_A          119 FYDFYLVMPFMQ-TDLQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSA--------GVVHRDLKPGNLAVNEDCELKILDF  188 (371)
T ss_dssp             CCCCEEEEECCC-EEHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECST
T ss_pred             ceeEEEEEcccc-ccHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHC--------CCcCCCcCHHHeEECCCCCEEEEec
Confidence            123489999998 699988854 499999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.....       .....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||....
T Consensus       189 g~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~el~~g----------~~pf~~~~  246 (371)
T 4exu_A          189 GLARHADAE-------MTGYVVTRWYRAPEVILSWM-----HYNQTVDIWSVGCIMAEMLTG----------KTLFKGKD  246 (371)
T ss_dssp             TCC---------------CTTCCCTTSCHHHHSCCS-----CCCTTHHHHHHHHHHHHHHHS----------SCSCCCSS
T ss_pred             CcccccccC-------cCCcccCccccCHHHhcCCC-----CCCcHHhHHHHHHHHHHHHhC----------CCCCCCCC
Confidence            999765432       23457899999999987631     567899999999999999999          56665421


Q ss_pred             CCCCChHHHHhhhhhcCC--------------------CCCCCCC-C--CCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQ--------------------RPVLPNR-W--VSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                          ..+.+.........                    .+..+.. +  .....+..+.+|+.+||+.||++|||+.|++
T Consensus       247 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  322 (371)
T 4exu_A          247 ----YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL  322 (371)
T ss_dssp             ----HHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             ----hHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence                11111111110000                    0000000 0  0123467899999999999999999999998


Q ss_pred             HH
Q psy14889        423 KT  424 (443)
Q Consensus       423 ~~  424 (443)
                      +.
T Consensus       323 ~h  324 (371)
T 4exu_A          323 TH  324 (371)
T ss_dssp             TS
T ss_pred             cC
Confidence            63

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=5.3e-41  Score=332.24  Aligned_cols=196  Identities=26%  Similarity=0.310  Sum_probs=157.0

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-CC-----Cceeeeeecccc
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-HE-----NILGYIGSDMTS  202 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H~-----nIv~l~g~~~~~  202 (443)
                      .+.+.++|++.+.||+|+||.||+|..  +++.||||++..........+.|+..+..++ |+     +|+++++++...
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            344568999999999999999999988  5789999998654332222233444433343 54     489999988776


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc--CC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK--TN  277 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~--~~  277 (443)
                          ..+++||||+. |+|.+++..   ..+++..+..++.|++.||.|||++      ..+|+||||||+|||++  .+
T Consensus       129 ----~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~------~~~ivHrDlkp~NIll~~~~~  197 (382)
T 2vx3_A          129 ----NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP------ELSIIHCDLKPENILLCNPKR  197 (382)
T ss_dssp             ----TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST------TTCEECCCCSGGGEEESSTTS
T ss_pred             ----CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC------CCCEEcCCCCcccEEEecCCC
Confidence                46899999997 599999965   3589999999999999999999964      23999999999999995  47


Q ss_pred             CcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccC
Q psy14889        278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA  350 (443)
Q Consensus       278 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~  350 (443)
                      +.+||+|||+++.....       .....||+.|+|||++.+.      .++.++|||||||++|||+||+.|
T Consensus       198 ~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg~~p  257 (382)
T 2vx3_A          198 SAIKIVDFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGM------PYDLAIDMWSLGCILVEMHTGEPL  257 (382)
T ss_dssp             CCEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcEEEEeccCceecccc-------cccccCCccccChHHHcCC------CCCcHHHHHHHHHHHHHHHhCCCC
Confidence            78999999999776432       1345789999999999876      677899999999999999999443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-41  Score=334.17  Aligned_cols=257  Identities=19%  Similarity=0.208  Sum_probs=190.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhcc-----------CCCceeeeeecccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLR-----------HENILGYIGSDMTS  202 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-----------H~nIv~l~g~~~~~  202 (443)
                      ++|.+.+.||+|+||.||+|..  +++.||||++..........+.|+..+..++           ||||+++++++...
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            6899999999999999999997  6889999998654333333334444444444           89999999998876


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---  276 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---  276 (443)
                      ......+++||||+ +++|.+++..   ..+++..+..++.||+.||.|||+++       +|+||||||+|||++.   
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-------~ivH~Dikp~NIll~~~~~  170 (373)
T 1q8y_A           99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-------GIIHTDIKPENVLMEIVDS  170 (373)
T ss_dssp             ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT-------CEECSCCSGGGEEEEEEET
T ss_pred             CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC-------CEEecCCChHHeEEeccCC
Confidence            54445789999999 7899999864   45999999999999999999999852       8999999999999953   


Q ss_pred             ---CCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc
Q psy14889        277 ---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI  353 (443)
Q Consensus       277 ---~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~  353 (443)
                         .+.+||+|||++.......       ....||+.|+|||++.+.      .++.++|||||||++|||++|      
T Consensus       171 ~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g------  231 (373)
T 1q8y_A          171 PENLIQIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGA------PWGCGADIWSTACLIFELITG------  231 (373)
T ss_dssp             TTTEEEEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTC------CCCTHHHHHHHHHHHHHHHHS------
T ss_pred             CcCcceEEEcccccccccCCCC-------CCCCCCccccCcHHHhCC------CCCchHhHHHHHHHHHHHHhC------
Confidence               3489999999997665321       234789999999999876      677899999999999999999      


Q ss_pred             ccccCCCCCCCCCCCC--ChHHHHhhhhhcCCCC---------------------CCC-------------CCCCCchhH
Q psy14889        354 FEEYKAPYHDLVPMDP--SFDDMRKVICIDQQRP---------------------VLP-------------NRWVSDSTL  397 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~--~~~~~~~~~~~~~~~~---------------------~~~-------------~~~~~~~~~  397 (443)
                          ..||........  ....+...+......+                     ...             ....+...+
T Consensus       232 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (373)
T 1q8y_A          232 ----DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA  307 (373)
T ss_dssp             ----SCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHH
T ss_pred             ----CCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchH
Confidence                556654321110  1111111111100000                     000             000124567


Q ss_pred             HHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        398 NAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       398 ~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .++.+||.+||+.||++|||+.|+++
T Consensus       308 ~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          308 KEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhh
Confidence            88999999999999999999999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=2.3e-41  Score=330.16  Aligned_cols=250  Identities=18%  Similarity=0.253  Sum_probs=195.8

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCccc------------------hHHHHHHHHHHhccCCCceeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS------------------WSRETEIYSTVLLRHENILGYI  196 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~------------------~~~e~ei~~~~~l~H~nIv~l~  196 (443)
                      .++|.+.+.||+|+||.||+|.++|+.||||++.......                  .....|+..+..++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4789999999999999999999999999999986432111                  3445667777779999999999


Q ss_pred             eeccccCCcccEEEeeecccCcccHHHH------hc---ccCCCHHHHHHHHHHHHHHHHHHHH-chhcCCCCCCeEEeC
Q psy14889        197 GSDMTSRNSCTQLWLVTHYHSFGSLYDH------LN---RTTLNHHQMMKICLSIVNGLVHLHT-EIFGTQGKPAIAHRD  266 (443)
Q Consensus       197 g~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~---~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~~~~~~iiHrD  266 (443)
                      +++.+.    ...++||||+++|+|.++      +.   ...+++..+..++.|++.||.|||+ .        +|+|||
T Consensus       110 ~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--------~i~H~d  177 (348)
T 2pml_X          110 GIITNY----DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--------NICHRD  177 (348)
T ss_dssp             EEEESS----SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS--------CEECCC
T ss_pred             EEEeeC----CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC--------CEeecC
Confidence            998776    458999999999999998      64   3579999999999999999999998 7        999999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCC-ccchHHHHHHHHHHH
Q psy14889        267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC  345 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~-~sDvwS~Gvvl~ell  345 (443)
                      |||+|||++.++.+||+|||++.......      .....||..|+|||.+.+..     .++. ++||||||+++|||+
T Consensus       178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~-----~~~~~~~Di~slG~il~~l~  246 (348)
T 2pml_X          178 VKPSNILMDKNGRVKLSDFGESEYMVDKK------IKGSRGTYEFMPPEFFSNES-----SYNGAKVDIWSLGICLYVMF  246 (348)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECBTTE------ECSSCSCGGGCCGGGGSSCC-----CEEHHHHHHHHHHHHHHHHH
T ss_pred             CChHhEEEcCCCcEEEecccccccccccc------ccCCCCCcCccCchhhcCCC-----CCCcchhhHHHHHHHHHHHH
Confidence            99999999999999999999997664321      13347899999999997652     2234 899999999999999


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCC--------------CCCchhHHHHHHHHHHHhcCC
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNR--------------WVSDSTLNAMTKVMKECWHQN  411 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~li~~cl~~d  411 (443)
                      +|          ..||.....   . ......+..  .....+..              ......+..+.+|+.+||+.|
T Consensus       247 ~g----------~~pf~~~~~---~-~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  310 (348)
T 2pml_X          247 YN----------VVPFSLKIS---L-VELFNNIRT--KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN  310 (348)
T ss_dssp             HS----------SCSSCCSSC---S-HHHHHHHTS--CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSS
T ss_pred             hC----------CCCCCCCCc---H-HHHHHHHhc--cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCC
Confidence            99          666654321   1 222222211  11112210              001345678999999999999


Q ss_pred             cCCCCcHHHHHH
Q psy14889        412 ANVRLSALRVKK  423 (443)
Q Consensus       412 P~~Rps~~evl~  423 (443)
                      |.+|||+.|+++
T Consensus       311 P~~Rps~~e~l~  322 (348)
T 2pml_X          311 PAERITSEDALK  322 (348)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=4.5e-41  Score=325.48  Aligned_cols=253  Identities=24%  Similarity=0.369  Sum_probs=172.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHH-HHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIY-STVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~-~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|..  +|+.||||++.......  .....|+. .+..++||||+++++++...    ...+
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~----~~~~   97 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE----GDCW   97 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS----SEEE
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC----CceE
Confidence            6899999999999999999998  48999999987543222  12223333 34457999999999998876    4579


Q ss_pred             eeecccCcccHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        211 LVTHYHSFGSLYDHLN------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                      +||||+.+ +|.+++.      ...+++..+..++.|++.||.|||+..       +|+||||||+|||++.++.+||+|
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-------~ivH~dlkp~NIll~~~~~~kl~D  169 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL-------KIIHRDIKPSNILLDRSGNIKLCD  169 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH-------SCCCSCCCGGGEEEETTTEEEECC
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC-------CEeECCCCHHHEEEcCCCCEEEcc
Confidence            99999985 8888775      467999999999999999999999863       899999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+++.......     .....||+.|+|||++......  ..++.++||||||+++|||++|          ..||...
T Consensus       170 fg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~Di~slG~il~~l~~g----------~~pf~~~  232 (327)
T 3aln_A          170 FGISGQLVDSIA-----KTRDAGCRPYMAPERIDPSASR--QGYDVRSDVWSLGITLYELATG----------RFPYPKW  232 (327)
T ss_dssp             CSSSCC-------------------------------------CCSHHHHHHHHHHHHHHHHS----------CCCSSCC
T ss_pred             CCCceecccccc-----cccCCCCccccCceeeccccCc--CCCCchhhHHHHHHHHHHHHHC----------CCCCCCc
Confidence            999976653221     1234689999999998432111  1567899999999999999999          6666543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..   ..+.+....  ....+.++.. ....++..+.+|+.+||+.||++|||+.++++
T Consensus       233 ~~---~~~~~~~~~--~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          233 NS---VFDQLTQVV--KGDPPQLSNS-EEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ----------CCCC--CSCCCCCCCC-SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ch---HHHHHHHHh--cCCCCCCCCc-ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            11   111111111  1112222211 11346678999999999999999999999976

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.6e-41  Score=337.01  Aligned_cols=200  Identities=25%  Similarity=0.365  Sum_probs=146.5

Q ss_pred             hhccccc-cceeeeecCeEEEEEEEC----CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        134 LAKQISL-SECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       134 ~~~~~~~-~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      +.+.|.+ .++||+|+||.||+|++.    ++.||||++..... ......|+..+..++||||+++++++.....  ..
T Consensus        18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~   94 (405)
T 3rgf_A           18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHAD--RK   94 (405)
T ss_dssp             HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT--TE
T ss_pred             hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC--Ce
Confidence            3456776 458999999999999963    67899999865432 2233455666666999999999999865433  46


Q ss_pred             EEeeecccCcccHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----
Q psy14889        209 LWLVTHYHSFGSLYDHLNR----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----  274 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----  274 (443)
                      +++||||+. |+|.+++..          ..+++..+..++.||+.||.|||+.        +|+||||||+|||+    
T Consensus        95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--------~ivH~Dlkp~NIll~~~~  165 (405)
T 3rgf_A           95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--------WVLHRDLKPANILVMGEG  165 (405)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECCSS
T ss_pred             EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--------CEeCCCcCHHHeEEecCC
Confidence            899999997 588888742          1499999999999999999999999        99999999999999    


Q ss_pred             cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       275 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      +.++.+||+|||+++.+...... ........||+.|+|||++.+..     .++.++|||||||++|||++|+.|+
T Consensus       166 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~ell~g~~pf  236 (405)
T 3rgf_A          166 PERGRVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGAR-----HYTKAIDIWAIGCIFAELLTSEPIF  236 (405)
T ss_dssp             TTTTCEEECCTTCCC-----------------CCCTTCCHHHHTTCC-----SCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCCcEEEEECCCceecCCCCcc-cccCCCceecCcccCchhhcCCC-----cccchhhhHHHHHHHHHHHhCCCCC
Confidence            67789999999999876542211 11123457999999999997642     4678999999999999999995443

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=5.1e-41  Score=328.13  Aligned_cols=253  Identities=17%  Similarity=0.226  Sum_probs=188.2

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEE--CC-ceeEEEEeeccCccchHHHHHHHHHHhccCCC------ceeeeeeccc
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVW--HG-ENVAVKIFFSRDEASWSRETEIYSTVLLRHEN------ILGYIGSDMT  201 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~-~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~n------Iv~l~g~~~~  201 (443)
                      ...+.++|++.+.||+|+||.||+|..  ++ +.||||++............|+..+..++|+|      ++.+++++..
T Consensus        14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            344568999999999999999999997  34 68999998654333333344555555566665      8888888776


Q ss_pred             cCCcccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE----
Q psy14889        202 SRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----  274 (443)
Q Consensus       202 ~~~~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl----  274 (443)
                      .    ..+++||||+ +|+|.+++..   ..+++.++..++.||+.||.|||+.        +|+||||||+|||+    
T Consensus        94 ~----~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~--------~ivH~Dlkp~NIll~~~~  160 (355)
T 2eu9_A           94 H----GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN--------QLTHTDLKPENILFVNSE  160 (355)
T ss_dssp             T----TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEESCCC
T ss_pred             C----CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEEEeccc
Confidence            5    4689999999 5677777754   3599999999999999999999998        99999999999999    


Q ss_pred             ---------------cCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHH
Q psy14889        275 ---------------KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL  339 (443)
Q Consensus       275 ---------------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gv  339 (443)
                                     +.++.+||+|||+++.....       .....||+.|+|||++.+.      .++.++|||||||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~  227 (355)
T 2eu9_A          161 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------HTTIVATRHYRPPEVILEL------GWAQPCDVWSIGC  227 (355)
T ss_dssp             EEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-------CCSSCSCGGGCCHHHHTTC------CCCTHHHHHHHHH
T ss_pred             ccccccccccccccccCCCcEEEeecCcccccccc-------ccCCcCCCcccCCeeeecC------CCCCccchHHHHH
Confidence                           66789999999999764332       1345799999999999876      6778999999999


Q ss_pred             HHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCC------------------------------------
Q psy14889        340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQ------------------------------------  383 (443)
Q Consensus       340 vl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~------------------------------------  383 (443)
                      ++|||++|          ..||....    ..+...........                                    
T Consensus       228 il~el~~g----------~~pf~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (355)
T 2eu9_A          228 ILFEYYRG----------FTLFQTHE----NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC  293 (355)
T ss_dssp             HHHHHHHS----------SCSCCCSS----HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC
T ss_pred             HHHHHHhC----------CCCCCCCC----HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccC
Confidence            99999999          55554421    01111111000000                                    


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        384 RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+...........+.++.+|+.+||+.||++|||+.|+++
T Consensus       294 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          294 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             CCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0000001112345678999999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.4e-40  Score=321.50  Aligned_cols=255  Identities=26%  Similarity=0.354  Sum_probs=190.7

Q ss_pred             hccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCc-----cchHHHHHHHHH-HhccCCCceeeeeeccccC-C
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDE-----ASWSRETEIYST-VLLRHENILGYIGSDMTSR-N  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~-----~~~~~e~ei~~~-~~l~H~nIv~l~g~~~~~~-~  204 (443)
                      .++|++.+.||+|+||.||+|.+   +|+.||||++.....     ....+|.++... ..++||||+++++++.... .
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            37899999999999999999997   378899998864321     233344443332 2358999999999986321 1


Q ss_pred             cccEEEeeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                      ....+++||||+. |+|.+++..   ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+|
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------gi~H~dlkp~Nili~~~~~~k  160 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--------RVVHRDLKPQNILVTSSGQIK  160 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEE
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCHHHeEEcCCCCEE
Confidence            2256899999998 699999864   3499999999999999999999999        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+++.......     .....||..|+|||++.+.      .++.++||||||+++|||++|          ..||
T Consensus       161 l~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g----------~~pf  219 (326)
T 1blx_A          161 LADFGLARIYSFQMA-----LTSVVVTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR----------KPLF  219 (326)
T ss_dssp             ECSCCSCCCCCGGGG-----GCCCCCCCTTCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCSC
T ss_pred             EecCcccccccCCCC-----ccccccccceeCHHHHhcC------CCCcchhHHHHHHHHHHHHcC----------CCCC
Confidence            999999976653221     1335789999999999876      667899999999999999999          5566


Q ss_pred             CCCCCCCCChHHHHhhhhhcCC-------------------CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQ-------------------RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      ....    ....+.........                   ....+.......++..+.+|+.+||+.||++|||+.|++
T Consensus       220 ~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  295 (326)
T 1blx_A          220 RGSS----DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  295 (326)
T ss_dssp             CCSS----HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCC----HHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            5421    11111111110000                   000000011234667899999999999999999999998


Q ss_pred             H
Q psy14889        423 K  423 (443)
Q Consensus       423 ~  423 (443)
                      +
T Consensus       296 ~  296 (326)
T 1blx_A          296 S  296 (326)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6e-41  Score=323.84  Aligned_cols=245  Identities=18%  Similarity=0.287  Sum_probs=191.0

Q ss_pred             hHHHhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---------cchHHHHHHHHHHhccCCCceeee
Q psy14889        128 LLIQRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---------ASWSRETEIYSTVLLRHENILGYI  196 (443)
Q Consensus       128 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---------~~~~~e~ei~~~~~l~H~nIv~l~  196 (443)
                      ....+.+.++|++.+.||+|+||.||+|..  +++.||||++.....         .....|.+++....-.|+||++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             -----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            344456678999999999999999999987  688999999865422         233445555554222469999999


Q ss_pred             eeccccCCcccEEEeeecccCc-ccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEE
Q psy14889        197 GSDMTSRNSCTQLWLVTHYHSF-GSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV  274 (443)
Q Consensus       197 g~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl  274 (443)
                      +++...    ...++|+||+.+ ++|.+++.. ..+++..+..++.||+.||+|||+.        +|+||||||+|||+
T Consensus       115 ~~~~~~----~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivH~Dlkp~NIll  182 (320)
T 3a99_A          115 DWFERP----DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC--------GVLHRDIKDENILI  182 (320)
T ss_dssp             EEEECS----SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEE
T ss_pred             EEEecC----CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CcEeCCCCHHHEEE
Confidence            998776    457999999976 899999864 6799999999999999999999998        99999999999999


Q ss_pred             c-CCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCc
Q psy14889        275 K-TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI  353 (443)
Q Consensus       275 ~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~  353 (443)
                      + +++.+||+|||+++......      .....||+.|+|||++.+..     ..+.++||||||+++|||++|      
T Consensus       183 ~~~~~~~kL~Dfg~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~-----~~~~~~Di~slG~il~el~~g------  245 (320)
T 3a99_A          183 DLNRGELKLIDFGSGALLKDTV------YTDFDGTRVYSPPEWIRYHR-----YHGRSAAVWSLGILLYDMVCG------  245 (320)
T ss_dssp             ETTTTEEEECCCTTCEECCSSC------BCCCCSCGGGSCHHHHHHSC-----BCHHHHHHHHHHHHHHHHHHS------
T ss_pred             eCCCCCEEEeeCcccccccccc------ccCCCCCccCCChHHhccCC-----CCCccchHHhHHHHHHHHHHC------
Confidence            9 78899999999997765322      12346899999999987652     124688999999999999999      


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ..||...       ...   .. .  ....     ...++.++.+|+.+||+.||++|||+.|+++
T Consensus       246 ----~~pf~~~-------~~~---~~-~--~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          246 ----DIPFEHD-------EEI---IR-G--QVFF-----RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             ----SCSCCSH-------HHH---HH-C--CCCC-----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----CCCCCCh-------hhh---hc-c--cccc-----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                6676542       111   11 0  1111     1335678999999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.9e-41  Score=336.27  Aligned_cols=250  Identities=21%  Similarity=0.320  Sum_probs=182.9

Q ss_pred             ccccccceeeeecCeE-EEEEEECCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEeee
Q psy14889        136 KQISLSECIGKGRYGE-VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~-Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .+|.+.+.||+|+||+ ||++..+|+.||||++.........+|.+++..  + +|||||++++++.+.    ...++||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~--l~~HpnIv~l~~~~~~~----~~~~lv~   97 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRE--SDEHPNVIRYFCTEKDR----QFQYIAI   97 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHH--SCCCTTBCCEEEEEEET----TEEEEEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHh--ccCCCCcCeEEEEEecC----CEEEEEE
Confidence            5699999999999998 556666899999999876555555555555444  6 899999999998765    4579999


Q ss_pred             cccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-----CCcEEEEecC
Q psy14889        214 HYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-----NGTCVIADFG  286 (443)
Q Consensus       214 e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-----~~~~kl~DfG  286 (443)
                      ||+. |+|.+++...  .+.+..+..++.||+.||.|||+.        +|+||||||+|||++.     ...+||+|||
T Consensus        98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG  168 (432)
T 3p23_A           98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL--------NIVHRDLKPHNILISMPNAHGKIKAMISDFG  168 (432)
T ss_dssp             ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT--------TCCCCCCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred             ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC--------cCEeCCCCHHHEEEecCCCCCceeEEEeccc
Confidence            9997 6999999754  355667789999999999999999        9999999999999953     2368899999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      +++......... .......||+.|+|||++.+....   .++.++|||||||++|||++ |          ..||....
T Consensus       169 ~a~~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~---~~t~~~DiwSlG~il~ellt~g----------~~pf~~~~  234 (432)
T 3p23_A          169 LCKKLAVGRHSF-SRRSGVPGTEGWIAPEMLSEDCKE---NPTYTVDIFSAGCVFYYVISEG----------SHPFGKSL  234 (432)
T ss_dssp             EEECC-------------CCSCTTSCCGGGTSCC------CCCTHHHHHHHHHHHHHHHTTS----------CBTTBSTT
T ss_pred             ceeeccCCCcce-eeccccCCCcCccChhhhhccccc---CCCcHHHHHHHHHHHHHHHcCC----------CCCcchhh
Confidence            998765432111 112345799999999999753211   56679999999999999999 6          56665421


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           ........ ....   .+........+..+.+|+.+||+.||++|||+.++++
T Consensus       235 -----~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          235 -----QRQANILL-GACS---LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             -----THHHHHHT-TCCC---CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----HHHHHHHh-ccCC---ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence                 11211111 1111   1111112345677899999999999999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=325.79  Aligned_cols=252  Identities=20%  Similarity=0.321  Sum_probs=189.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCc--c
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNS--C  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~--~  206 (443)
                      +.++|.+.+.||+|+||.||+|..  +|+.||||++.......   .....|+..+..++||||+++++++......  .
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            347899999999999999999998  58999999986543221   2224566666679999999999998765431  1


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+. |+|.+++.. .+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~--------~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSA--------GVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eeEEEEecccc-CCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCHHHEeECCCCcEEEeecc
Confidence            23589999998 699988754 599999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.....       .....||+.|+|||++.+..     .++.++||||||+++|||++|          ..||.... 
T Consensus       172 ~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~Di~slG~il~el~~g----------~~pf~~~~-  228 (353)
T 3coi_A          172 LARHADAE-------MTGYVVTRWYRAPEVILSWM-----HYNQTVDIWSVGCIMAEMLTG----------KTLFKGKD-  228 (353)
T ss_dssp             CTTC---------------CCSBCCSCHHHHSCCS-----CCCTTHHHHHHHHHHHHHHHS----------SCSSBSSC-
T ss_pred             cccCCCCC-------ccccccCcCcCCHHHHhCcC-----CCCchhhHHHHHHHHHHHHhC----------CCCCCCCC-
Confidence            99765432       13347899999999987631     566899999999999999999          56665431 


Q ss_pred             CCCChHHHHhhhhh-----------------------cCC--CCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        367 MDPSFDDMRKVICI-----------------------DQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       367 ~~~~~~~~~~~~~~-----------------------~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                         ..+.+......                       ...  +..+..  .....+..+.+|+.+||+.||++|||+.++
T Consensus       229 ---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  303 (353)
T 3coi_A          229 ---YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ--LFPRASPQAADLLEKMLELDVDKRLTAAQA  303 (353)
T ss_dssp             ---HHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTT--TCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             ---HHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHH--hcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence               11111111110                       000  111111  113456789999999999999999999999


Q ss_pred             HH
Q psy14889        422 KK  423 (443)
Q Consensus       422 l~  423 (443)
                      ++
T Consensus       304 l~  305 (353)
T 3coi_A          304 LT  305 (353)
T ss_dssp             HT
T ss_pred             hc
Confidence            86

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.4e-40  Score=318.45  Aligned_cols=256  Identities=20%  Similarity=0.332  Sum_probs=186.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCcc---chHHHHHHHHHHhcc--CCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA---SWSRETEIYSTVLLR--HENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~--H~nIv~l~g~~~~~~~~~~  207 (443)
                      ..++|++.+.||+|+||.||++.. +++.||||++......   ......|+..+..++  ||||+++++++...    .
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~----~  101 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----Q  101 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS----S
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC----C
Confidence            346899999999999999999988 5889999998654322   122234555555565  69999999998776    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+++||| +.+++|.+++.. ..+++..+..++.|++.||.|||+.        +|+||||||+|||++ ++.+||+|||
T Consensus       102 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------~ivH~dlkp~NIl~~-~~~~kL~Dfg  171 (313)
T 3cek_A          102 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH--------GIVHSDLKPANFLIV-DGMLKLIDFG  171 (313)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred             EEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceecCCCcccEEEE-CCeEEEeecc
Confidence            5899999 567899999964 6799999999999999999999999        999999999999996 4899999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCccccccccccccc-----CcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM-----DCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-----~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      +++.........  ......||+.|+|||.+.+....     ....++.++||||||+++|||++|          ..||
T Consensus       172 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g----------~~pf  239 (313)
T 3cek_A          172 IANQMQPDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG----------KTPF  239 (313)
T ss_dssp             SSCC----------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHS----------SCTT
T ss_pred             ccccccCccccc--cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhC----------CCch
Confidence            997665432211  12345789999999998752110     001566899999999999999999          6677


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .....   ....+.... ........+     ...+.++.+++.+||+.||++|||+.|+++.
T Consensus       240 ~~~~~---~~~~~~~~~-~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          240 QQIIN---QISKLHAII-DPNHEIEFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             TTCCS---HHHHHHHHH-CTTSCCCCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhHHH---HHHHHHHHH-hcccccCCc-----ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            65321   112222222 112222222     2245679999999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=319.70  Aligned_cols=241  Identities=20%  Similarity=0.317  Sum_probs=184.1

Q ss_pred             HhhhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-------chHHHHHHHHHHhc----cCCCceeeee
Q psy14889        131 QRTLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-------SWSRETEIYSTVLL----RHENILGYIG  197 (443)
Q Consensus       131 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-------~~~~e~ei~~~~~l----~H~nIv~l~g  197 (443)
                      .+.+.++|++.+.||+|+||.||+|..  +++.||||++......       ....+.|+..+..+    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            345668899999999999999999987  6889999998654321       11112344444446    8999999999


Q ss_pred             eccccCCcccEEEeeecc-cCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        198 SDMTSRNSCTQLWLVTHY-HSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                      ++....    ..++|+|| +.+++|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+||+++
T Consensus       106 ~~~~~~----~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~  173 (312)
T 2iwi_A          106 WFETQE----GFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR--------GVVHRDIKDENILID  173 (312)
T ss_dssp             EC---------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH--------TEECCCCSGGGEEEE
T ss_pred             EEecCC----eEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecCCChhhEEEe
Confidence            987763    46899999 789999999964 5699999999999999999999999        999999999999999


Q ss_pred             -CCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCC-CCccchHHHHHHHHHHHhcccCCCc
Q psy14889        276 -TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFES-FKKADIYALGLVLWEVCRRTKANGI  353 (443)
Q Consensus       276 -~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~sDvwS~Gvvl~elltg~~~~~~  353 (443)
                       .++.+||+|||++.......      .....||..|+|||++.+.      .+ +.++||||||+++|||++|      
T Consensus       174 ~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~~Di~slG~il~~l~~g------  235 (312)
T 2iwi_A          174 LRRGCAKLIDFGSGALLHDEP------YTDFDGTRVYSPPEWISRH------QYHALPATVWSLGILLYDMVCG------  235 (312)
T ss_dssp             TTTTEEEECCCSSCEECCSSC------BCCCCSCTTTSCHHHHHHS------CBCHHHHHHHHHHHHHHHHHHS------
T ss_pred             CCCCeEEEEEcchhhhcccCc------ccccCCcccccCceeeecC------CCCCccchHHHHHHHHHHHHHC------
Confidence             88999999999997765422      1334689999999998765      33 2489999999999999999      


Q ss_pred             ccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       354 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ..||...       ...   ..   ....++     ..++..+.+++.+||+.||++|||+.|+++
T Consensus       236 ----~~pf~~~-------~~~---~~---~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          236 ----DIPFERD-------QEI---LE---AELHFP-----AHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             ----SCSCCSH-------HHH---HH---TCCCCC-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----CCCCCCh-------HHH---hh---hccCCc-----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                6676542       111   11   111222     235678999999999999999999999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.2e-40  Score=317.80  Aligned_cols=252  Identities=21%  Similarity=0.329  Sum_probs=175.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchH--HHHH-HHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWS--RETE-IYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~--~e~e-i~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||.||+|.+  +|+.||||++.........  ...+ ...+..++||||+++++++...    ..++
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~----~~~~  100 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN----TDVF  100 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SEEE
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC----CcEE
Confidence            6899999999999999999998  5899999998754332211  1122 2234457999999999998876    4589


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+ ++.+..+..  ...+++..+..++.|++.||.|||+..       +|+||||||+|||++.++.+||+|||++
T Consensus       101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-------~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH-------GVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH-------CCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC-------CEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            999999 456666554  367999999999999999999999832       8999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      ........     .....||+.|+|||++...... ...++.++||||||+++|||++|          ..||....   
T Consensus       173 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Di~slG~il~~l~~g----------~~pf~~~~---  233 (318)
T 2dyl_A          173 GRLVDDKA-----KDRSAGCAAYMAPERIDPPDPT-KPDYDIRADVWSLGISLVELATG----------QFPYKNCK---  233 (318)
T ss_dssp             -------------------CCTTCCHHHHC---------CCTHHHHHHHHHHHHHHHHS----------SCTTTTCC---
T ss_pred             hhccCCcc-----ccccCCCccccChhhccccccc-ccCCccccchhhHHHHHHHHHhC----------CCCCCCCC---
Confidence            76543221     1234689999999998632111 01567899999999999999999          66776531   


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+.+.....  ...+..+.   ...++.++.+++.+||+.||.+|||+.++++
T Consensus       234 ~~~~~~~~~~~--~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          234 TDFEVLTKVLQ--EEPPLLPG---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             SHHHHHHHHHH--SCCCCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccHHHHHHHhc--cCCCCCCc---cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            12222223222  22233332   1235678999999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.1e-39  Score=309.95  Aligned_cols=235  Identities=12%  Similarity=0.097  Sum_probs=178.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC--CceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+.++|++.+.||+|+||.||+|.+.  |+.||||++.......    .....|+..+..++||||+++++++.+.    
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----  103 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR----  103 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET----
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC----
Confidence            34578999999999999999999984  8999999987543322    2334566666779999999999998776    


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ...++||||+++++|.++++++ ....++..++.|++.||+|||+.        +|+||||||+|||++.++.+||+++|
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~i~~ql~~aL~~lH~~--------givH~Dikp~NIll~~~g~~kl~~~~  174 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADTS-PSPVGAIRAMQSLAAAADAAHRA--------GVALSIDHPSRVRVSIDGDVVLAYPA  174 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred             CcEEEEEEecCCCCHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHC--------CCccCCCCcccEEEcCCCCEEEEecc
Confidence            4589999999999999999765 46667899999999999999999        99999999999999999999998543


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                                              |++             .++.++|||||||++|||+||          ..||.+...
T Consensus       175 ------------------------~~~-------------~~~~~~Di~slG~il~elltg----------~~Pf~~~~~  207 (286)
T 3uqc_A          175 ------------------------TMP-------------DANPQDDIRGIGASLYALLVN----------RWPLPEAGV  207 (286)
T ss_dssp             ------------------------CCT-------------TCCHHHHHHHHHHHHHHHHHS----------EECSCCCSB
T ss_pred             ------------------------ccC-------------CCCchhHHHHHHHHHHHHHHC----------CCCCCcCCc
Confidence                                    333             234689999999999999999          556655321


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ..... ...+..   ...+..+ ......++.++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus       208 ~~~~~-~~~~~~---~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          208 RSGLA-PAERDT---AGQPIEP-ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             CCCSE-ECCBCT---TSCBCCH-HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             chhhH-HHHHHh---ccCCCCh-hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            11000 000000   0000000 00112356789999999999999999 99999999999886543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.1e-39  Score=343.76  Aligned_cols=245  Identities=18%  Similarity=0.229  Sum_probs=188.4

Q ss_pred             hhhhccccccceeeeecCeEEEEEEE---CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      +.+.++|++.+.||+|+||.||+|.+   +|+.||||++......  ......|+..+..++||||+++++++.......
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            34558999999999999999999997   4789999988643322  122345666667799999999999988654321


Q ss_pred             -cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 -TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 -~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       ...|+||||+++++|.+++.. .+++.+++.++.||+.||.|||+.        +|+||||||+|||++.+ .+||+||
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~--------giiHrDlkp~NIll~~~-~~kl~DF  225 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSI--------GLVYNDLKPENIMLTEE-QLKLIDL  225 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C-CCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECSS-CEEECCC
T ss_pred             CceeEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC--------CCeecccChHHeEEeCC-cEEEEec
Confidence             236999999999999998865 799999999999999999999999        99999999999999886 8999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.....        ....||+.|+|||++.+.       .+.++|||||||++|||++|          ..||....
T Consensus       226 G~a~~~~~~--------~~~~gt~~y~aPE~~~~~-------~~~~sDi~slG~~l~~l~~g----------~~~~~~~~  280 (681)
T 2pzi_A          226 GAVSRINSF--------GYLYGTPGFQAPEIVRTG-------PTVATDIYTVGRTLAALTLD----------LPTRNGRY  280 (681)
T ss_dssp             TTCEETTCC--------SCCCCCTTTSCTTHHHHC-------SCHHHHHHHHHHHHHHHHSC----------CCEETTEE
T ss_pred             ccchhcccC--------CccCCCccccCHHHHcCC-------CCCceehhhhHHHHHHHHhC----------CCCCcccc
Confidence            999766432        234799999999998764       35799999999999999999          34443311


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-cHHHHHHHHHHHh
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVKKTLIKLA  429 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~l~  429 (443)
                      ...                  ++........+..+.+++.+||+.||++|| +++++...|..+.
T Consensus       281 ~~~------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          281 VDG------------------LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             CSS------------------CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ccc------------------ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            000                  000000112345789999999999999999 5777777777654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.9e-39  Score=337.18  Aligned_cols=275  Identities=20%  Similarity=0.212  Sum_probs=191.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccC--CcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSR--NSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~--~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|.+  +|+.||||++......  ......|+..+..++||||+++++++....  ......
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            7899999999999999999987  5899999987653221  122345666666699999999999976521  112457


Q ss_pred             EeeecccCcccHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCc---EEE
Q psy14889        210 WLVTHYHSFGSLYDHLNRT----TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVI  282 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~---~kl  282 (443)
                      ++||||+++|+|.+++...    .+++..+..++.|++.||+|||+.        +|+||||||+|||++.++.   +||
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~--------gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN--------RIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT--------TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccCCCCHHHeEeecCCCceeEEE
Confidence            9999999999999999752    599999999999999999999998        9999999999999997764   999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||++........     .....||+.|+|||.+.+.      .++.++||||||+++|||++|..|+...... ..|.
T Consensus       166 ~DFG~a~~~~~~~~-----~~~~~gt~~Y~APE~l~~~------~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-~~~~  233 (676)
T 3qa8_A          166 IDLGYAKELDQGEL-----CTEFVGTLQYLAPELLEQK------KYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWH  233 (676)
T ss_dssp             CSCCCCCBTTSCCC-----CCCCCSCCTTCSSCSSCCS------CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-HHSS
T ss_pred             cccccccccccccc-----cccccCCcccCChHHhccC------CCCchhHHHHHHHHHHHHHHCCCCCCcccch-hhhh
Confidence            99999987654321     2345799999999999876      6778999999999999999995443210000 0000


Q ss_pred             CCCCCCCChH-----HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHH-----HHHHHHHHhhcc
Q psy14889        363 DLVPMDPSFD-----DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR-----VKKTLIKLACAD  432 (443)
Q Consensus       363 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e-----vl~~L~~l~~~~  432 (443)
                      ..........     ........ ......+ .......+..+.+++.+||+.||++|||+.+     ..+.++.+.+..
T Consensus       234 ~~i~~~~~~~~~~~~~l~g~~~~-~~~lp~p-~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          234 GKVREKSNEHIVVYDDLTGAVKF-SSVLPTP-NHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             TTCC------CCSCCCCSSSCCC-CSSSCCS-CCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred             hhhhcccchhhhhhhhhcccccc-ccccCCc-hhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence            0000000000     00000000 0001111 1223457889999999999999999999988     556777766543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.7e-38  Score=302.21  Aligned_cols=233  Identities=19%  Similarity=0.271  Sum_probs=172.9

Q ss_pred             hhcccccc-ceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        134 LAKQISLS-ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       134 ~~~~~~~~-~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.++|.+. +.||+|+||.||+|..  +++.||||++...  .....|.++.. ..++||||+++++++.........++
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~e~~~~~-~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHW-RASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHH-HHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--HHHHHHHHHHH-HhccCCCchhHHhhhhhhcCCCceEE
Confidence            34677776 7899999999999998  6889999998542  23344554442 23799999999999876333235689


Q ss_pred             eeecccCcccHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CCcEEEEe
Q psy14889        211 LVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIAD  284 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~---~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~~~kl~D  284 (443)
                      +||||+++|+|.+++...   .+++..+..++.|++.||.|||+.        +|+||||||+|||++.   ++.+||+|
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--------NIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCHHHEEEecCCCCCcEEEec
Confidence            999999999999999753   599999999999999999999999        9999999999999998   78999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||++.....                          .      .++.++|||||||++|||++|          ..||...
T Consensus       164 fg~a~~~~~--------------------------~------~~~~~~DiwslG~il~el~tg----------~~pf~~~  201 (299)
T 3m2w_A          164 FGFAKETTG--------------------------E------KYDKSCDMWSLGVIMYILLCG----------YPPFYSN  201 (299)
T ss_dssp             CTTCEECTT--------------------------C------GGGGHHHHHHHHHHHHHHHHS----------SCSCCC-
T ss_pred             ccccccccc--------------------------c------cCCchhhHHHHHHHHHHHHHC----------CCCCCCC
Confidence            999854321                          1      344689999999999999999          5666543


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...... ......+  .......+.. ....++.++.+++.+||+.||++|||+.|+++
T Consensus       202 ~~~~~~-~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          202 HGLAIS-PGMKTRI--RMGQYEFPNP-EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             -------CCSCCSS--CTTCCSSCHH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cchhhh-HHHHHHH--hhccccCCch-hcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            111000 0000000  0001111100 00235678999999999999999999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.2e-39  Score=316.89  Aligned_cols=245  Identities=17%  Similarity=0.157  Sum_probs=175.9

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCcc---------chHHHHHHHHHHhcc---------CCCceeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---------SWSRETEIYSTVLLR---------HENILGYI  196 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---------~~~~e~ei~~~~~l~---------H~nIv~l~  196 (443)
                      .++|++.+.||+|+||+||+|+++|+.||||++......         ......|+..+..++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            478999999999999999999999999999998654321         022233444443354         55555555


Q ss_pred             ee-----------------ccccCC---------cccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Q psy14889        197 GS-----------------DMTSRN---------SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH  250 (443)
Q Consensus       197 g~-----------------~~~~~~---------~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH  250 (443)
                      ++                 +.+..+         ....+++||||+++|++.+.+.+..+++..+..++.||+.||+|||
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            44                 433100         0246899999999998877777778999999999999999999999


Q ss_pred             -HchhcCCCCCCeEEeCCCCCCEEEcCCC--------------------cEEEEecCCcccccccCCcCCCCCCCccccc
Q psy14889        251 -TEIFGTQGKPAIAHRDIKSKNILVKTNG--------------------TCVIADFGLAVSYSQLSNKMDIPPNPRVGTK  309 (443)
Q Consensus       251 -~~~~~~~~~~~iiHrDlk~~NiLl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~  309 (443)
                       +.        +|+||||||+|||++.++                    .+||+|||+|+.....         ...||+
T Consensus       179 ~~~--------~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------~~~gt~  241 (336)
T 2vuw_A          179 ASL--------RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------IVVFCD  241 (336)
T ss_dssp             HHH--------CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------EEECCC
T ss_pred             HhC--------CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------cEEEee
Confidence             88        999999999999999887                    8999999999876532         247999


Q ss_pred             CcccccccccccccCcCCCCCccchHHHHHH-HHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCC
Q psy14889        310 RYMSPEILDESINMDCFESFKKADIYALGLV-LWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLP  388 (443)
Q Consensus       310 ~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvv-l~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (443)
                      .|+|||++.+.      . +.++||||||++ .+++++|          ..||....    ........+.........+
T Consensus       242 ~y~aPE~~~g~------~-~~~~Diwsl~~~~~~~~~~g----------~~p~~~~~----~~~~~~~~~~~~~~~~~~~  300 (336)
T 2vuw_A          242 VSMDEDLFTGD------G-DYQFDIYRLMKKENNNRWGE----------YHPYSNVL----WLHYLTDKMLKQMTFKTKC  300 (336)
T ss_dssp             CTTCSGGGCCC------S-SHHHHHHHHHHHHHTTCTTS----------CCTHHHHH----HHHHHHHHHHHTCCCSSCC
T ss_pred             cccChhhhcCC------C-ccceehhhhhCCCCcccccc----------cCCCcchh----hhhHHHHhhhhhhccCccc
Confidence            99999999865      2 579999998777 7777777          55664310    0011111111111111111


Q ss_pred             CCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        389 NRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       389 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      .......+++++.+|+++||+.|     |+.|++
T Consensus       301 ~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          301 NTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             chhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            11112357889999999999977     888887

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=9.7e-39  Score=319.13  Aligned_cols=245  Identities=15%  Similarity=0.191  Sum_probs=171.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccC-CCceeeeee----------
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRH-ENILGYIGS----------  198 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H-~nIv~l~g~----------  198 (443)
                      ..|...+.||+|+||.||+|.+  +|+.||||++......    ....+.|+..+..++| +|+.....+          
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            4688889999999999999998  4999999988633221    2233455555555766 322111111          


Q ss_pred             -----------ccccC-CcccEEEeeecccCcccHHHHhc--------ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCC
Q psy14889        199 -----------DMTSR-NSCTQLWLVTHYHSFGSLYDHLN--------RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG  258 (443)
Q Consensus       199 -----------~~~~~-~~~~~~~lv~e~~~~gsL~~~l~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~  258 (443)
                                 ..... .....++++|+++ +++|.++++        +..+++..++.++.||+.||+|||+.      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------  230 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY------  230 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC------
Confidence                       11110 0012356777765 479999884        34578889999999999999999999      


Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCccccccccccccc----CcCCCCCccch
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM----DCFESFKKADI  334 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----~~~~~~~~sDv  334 (443)
                        +|+||||||+|||++.++.+||+|||+++.....       .....| +.|+|||++......    ....++.++||
T Consensus       231 --~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv  300 (413)
T 3dzo_A          231 --GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT  300 (413)
T ss_dssp             --TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred             --CcccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence              9999999999999999999999999998765543       133467 999999999422100    01156789999


Q ss_pred             HHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCC
Q psy14889        335 YALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV  414 (443)
Q Consensus       335 wS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  414 (443)
                      |||||++|||++|          ..||.......    ......   ...         ..+++.+.+||.+||+.||++
T Consensus       301 wSlGvil~elltg----------~~Pf~~~~~~~----~~~~~~---~~~---------~~~~~~~~~li~~~l~~dP~~  354 (413)
T 3dzo_A          301 WTLGLAIYWIWCA----------DLPNTDDAALG----GSEWIF---RSC---------KNIPQPVRALLEGFLRYPKED  354 (413)
T ss_dssp             HHHHHHHHHHHHS----------SCCCCTTGGGS----CSGGGG---SSC---------CCCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHHHC----------CCCCCCcchhh----hHHHHH---hhc---------ccCCHHHHHHHHHHccCChhh
Confidence            9999999999999          66665432111    001111   001         124568999999999999999


Q ss_pred             CCcHHHHHH
Q psy14889        415 RLSALRVKK  423 (443)
Q Consensus       415 Rps~~evl~  423 (443)
                      |||+.++++
T Consensus       355 Rpt~~~~l~  363 (413)
T 3dzo_A          355 RLLPLQAME  363 (413)
T ss_dssp             SCCHHHHTT
T ss_pred             CcCHHHHHh
Confidence            999877643

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=2.6e-31  Score=274.88  Aligned_cols=178  Identities=18%  Similarity=0.165  Sum_probs=120.1

Q ss_pred             eeeecCeEEEEEE--ECCceeEEEEeeccCc-----------cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEE
Q psy14889        144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDE-----------ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       144 lG~G~fg~Vy~~~--~~~~~vAvK~~~~~~~-----------~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.|++|.+..++  +.|+.+|+|++.....           .......|+..+.++ .|+||+++++++.+.    ..+
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~----~~~  317 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA----QSG  317 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS----SEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC----CEE
Confidence            4556666655443  3689999999865321           111223466666666 799999999999877    568


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ||||||++||+|.+++.+ +.++..   .|+.||+.||+|||++        |||||||||+|||++.++.+||+|||+|
T Consensus       318 yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~--------GIIHRDIKPeNILL~~dg~vKL~DFGlA  386 (569)
T 4azs_A          318 WLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ--------GFWHDDVRPWNVMVDARQHARLIDFGSI  386 (569)
T ss_dssp             EEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT--------TCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred             EEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC--------CceeccCchHhEEECCCCCEEEeecccC
Confidence            999999999999999975 456654   5789999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                      +........    ..+.+||+.|||||++.+.       +..++|+||+|++++++.++
T Consensus       387 r~~~~~~~~----~~t~vGTp~YmAPE~l~g~-------~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          387 VTTPQDCSW----PTNLVQSFFVFVNELFAEN-------KSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             ESCC---CC----SHHHHHHHHHHHHHHC------------------------CCCCTT
T ss_pred             eeCCCCCcc----ccCceechhhccHHHhCCC-------CCCcccccccccchhhhccc
Confidence            876543222    2346899999999999864       33679999999999888766

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.94  E-value=1.8e-28  Score=252.19  Aligned_cols=184  Identities=18%  Similarity=0.151  Sum_probs=135.4

Q ss_pred             cccceeeeecCeEEEEEEECCceeEEEEeeccCcc---------chHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        139 SLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEA---------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~---------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ...+.||+|+||.||+|.+.+..+|+|+.......         ......|+..+..++||||+++..++....    ..
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----~~  414 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD----NK  414 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT----TT
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC----cc
Confidence            34678999999999999889999999986443211         111245666666799999995555444432    24


Q ss_pred             EeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        210 WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ++||||+++|+|.+++.+       +..++.|+++||.|||++        +|+||||||+|||++.  .+||+|||+++
T Consensus       415 ~lVmE~~~ggsL~~~l~~-------~~~i~~qi~~aL~~LH~~--------gIiHrDiKp~NILl~~--~~kL~DFGla~  477 (540)
T 3en9_A          415 RIMMSYINGKLAKDVIED-------NLDIAYKIGEIVGKLHKN--------DVIHNDLTTSNFIFDK--DLYIIDFGLGK  477 (540)
T ss_dssp             EEEEECCCSEEHHHHSTT-------CTHHHHHHHHHHHHHHHT--------TEECTTCCTTSEEESS--SEEECCCTTCE
T ss_pred             EEEEECCCCCCHHHHHHH-------HHHHHHHHHHHHHHHHHC--------cCccCCCCHHHEEECC--eEEEEECccCE
Confidence            899999999999999976       668999999999999999        9999999999999998  99999999998


Q ss_pred             cccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        290 SYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       290 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                      ..........   .......||+.|||||++.....    .|+..+|+||..+-..+-+.+
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~----~Y~~~~d~ws~vl~~l~~v~~  534 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLE----GYKSVYDRWEIILELMKDVER  534 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH----HHHHHCTTHHHHHHHHHHHHT
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHH----HHHHHHhHHHHHHHHHHHHHh
Confidence            7754321100   00123579999999999986321    455678999999988888776

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.90  E-value=2.5e-24  Score=203.39  Aligned_cols=144  Identities=19%  Similarity=0.153  Sum_probs=109.9

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc-------------------cchHHHHHHHHHHhccCCCceee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE-------------------ASWSRETEIYSTVLLRHENILGY  195 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~-------------------~~~~~e~ei~~~~~l~H~nIv~l  195 (443)
                      ..|.+.+.||+|+||.||+|.+ +|+.||||++.....                   .......|+..+..++  | +++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v  166 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV  166 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence            3466779999999999999998 688999998853221                   1112234555555576  4 555


Q ss_pred             eeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc
Q psy14889        196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK  275 (443)
Q Consensus       196 ~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~  275 (443)
                      .+++...     ..++||||+++|+|.+ +..     .....++.|++.||.|||+.        +|+||||||+|||++
T Consensus       167 ~~~~~~~-----~~~lvmE~~~g~~L~~-l~~-----~~~~~i~~qi~~~l~~lH~~--------giiHrDlkp~NILl~  227 (282)
T 1zar_A          167 PKVYAWE-----GNAVLMELIDAKELYR-VRV-----ENPDEVLDMILEEVAKFYHR--------GIVHGDLSQYNVLVS  227 (282)
T ss_dssp             CCEEEEE-----TTEEEEECCCCEEGGG-CCC-----SCHHHHHHHHHHHHHHHHHT--------TEECSCCSTTSEEEE
T ss_pred             CeEEecc-----ceEEEEEecCCCcHHH-cch-----hhHHHHHHHHHHHHHHHHHC--------CCEeCCCCHHHEEEE
Confidence            5544332     3589999999999998 532     34557999999999999998        999999999999999


Q ss_pred             CCCcEEEEecCCcccccccCCcCCCCCCCcccccCccccccccc
Q psy14889        276 TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE  319 (443)
Q Consensus       276 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  319 (443)
                       ++.+||+|||+|+.                 +..++|||++..
T Consensus       228 -~~~vkl~DFG~a~~-----------------~~~~~a~e~l~r  253 (282)
T 1zar_A          228 -EEGIWIIDFPQSVE-----------------VGEEGWREILER  253 (282)
T ss_dssp             -TTEEEECCCTTCEE-----------------TTSTTHHHHHHH
T ss_pred             -CCcEEEEECCCCeE-----------------CCCCCHHHHHHH
Confidence             99999999999852                 345789998864

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.83  E-value=1.2e-20  Score=175.96  Aligned_cols=134  Identities=18%  Similarity=0.200  Sum_probs=101.1

Q ss_pred             ccccceeeeecCeEEEEEEE--CCce--eEEEEeeccCcc-------------------------chHHHHHHHHHHhcc
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGEN--VAVKIFFSRDEA-------------------------SWSRETEIYSTVLLR  188 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~--vAvK~~~~~~~~-------------------------~~~~e~ei~~~~~l~  188 (443)
                      |++.+.||+|+||.||+|.+  +|+.  ||||++......                         ....+.|+..+..++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999998  7888  999986432110                         012345666666678


Q ss_pred             CCCc--eeeeeeccccCCcccEEEeeecccCc-c----cHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HchhcCCCCC
Q psy14889        189 HENI--LGYIGSDMTSRNSCTQLWLVTHYHSF-G----SLYDHLNRTTLNHHQMMKICLSIVNGLVHLH-TEIFGTQGKP  260 (443)
Q Consensus       189 H~nI--v~l~g~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~~~~~  260 (443)
                      |+++  ...++.        ...+|||||+.+ |    +|.++...  .++..+..++.|++.||.||| +.        
T Consensus       129 ~~~i~~p~~~~~--------~~~~lVmE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~--------  190 (258)
T 1zth_A          129 EAGVSVPQPYTY--------MKNVLLMEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEA--------  190 (258)
T ss_dssp             HTTCCCCCEEEE--------ETTEEEEECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTS--------
T ss_pred             hCCCCCCeEEEc--------CCCEEEEEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHC--------
Confidence            8764  333332        124899999942 4    67766532  345678899999999999999 77        


Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      +|+||||||+|||++.  .++|+|||+|...
T Consensus       191 givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          191 ELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            9999999999999998  9999999999643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.70  E-value=3.3e-17  Score=159.31  Aligned_cols=138  Identities=15%  Similarity=0.180  Sum_probs=95.2

Q ss_pred             ccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc--------c---------chHHHHHHHHHHhccCCCceeeeeec
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE--------A---------SWSRETEIYSTVLLRHENILGYIGSD  199 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~--------~---------~~~~e~ei~~~~~l~H~nIv~l~g~~  199 (443)
                      |++...||+|+||.||+|.. +|+.||||+++....        .         .+..+..+  .....|+|+++++...
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl--~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRL--AAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHH--HHHHHHHHHHHHHHTT
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHH--HHHHHHHHHHHHHhcC
Confidence            88999999999999999987 799999998743210        0         01111111  1112355555544332


Q ss_pred             cccCCc--ccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        200 MTSRNS--CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       200 ~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      ......  ....+|||||+++++|.++..     ......++.|++.+|.|||..        |||||||||.|||++++
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~-----~~~~~~l~~qll~~l~~lH~~--------gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVSS-----VPDPASLYADLIALILRLAKH--------GLIHGDFNEFNILIREE  241 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCCC-----CSCHHHHHHHHHHHHHHHHHT--------TEECSCCSTTSEEEEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhcc-----cHHHHHHHHHHHHHHHHHHHC--------CCcCCCCCHHHEEEeCC
Confidence            211000  011269999999998876542     233467889999999999998        99999999999999887


Q ss_pred             C----------cEEEEecCCccc
Q psy14889        278 G----------TCVIADFGLAVS  290 (443)
Q Consensus       278 ~----------~~kl~DfGla~~  290 (443)
                      +          .+.|+||+-+..
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCcccccccccceEEEEeCCccc
Confidence            6          389999997643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.33  E-value=9.5e-12  Score=115.54  Aligned_cols=144  Identities=14%  Similarity=0.061  Sum_probs=106.4

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeec---cCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFS---RDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~---~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ..|++...++.|+.+.||+....+..+++|+...   ........|.+++.... .|.++.++++++...    ...|+|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~-~~~~vP~v~~~~~~~----~~~~lv   88 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLE-GKLPVPKVLHFERHD----GWSNLL   88 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-TTSCCCCEEEEEEET----TEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHh-cCCCCCeEEEEEecC----CceEEE
Confidence            4688888899899999999988889999998864   23334555665555421 366777888877654    457999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcC------------------------------------
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT------------------------------------  256 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~------------------------------------  256 (443)
                      |||++|.+|.+.+.    +......++.+++.+|..||+.....                                    
T Consensus        89 ~e~i~G~~l~~~~~----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (263)
T 3tm0_A           89 MSEADGVLCSEEYE----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF  164 (263)
T ss_dssp             EECCSSEEHHHHCC----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred             EEecCCeehhhccC----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence            99999999987642    22334578899999999999821000                                    


Q ss_pred             ---------------CCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        257 ---------------QGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       257 ---------------~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                                     ...+.++|+|+++.|||++++..+.|+||+.+
T Consensus       165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                           01256999999999999987666789999876

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.14  E-value=1.3e-10  Score=107.34  Aligned_cols=139  Identities=16%  Similarity=0.047  Sum_probs=93.7

Q ss_pred             cccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCC--ceeeeeeccccCCcccEEEeee
Q psy14889        137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~n--Iv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .+.+....+.|..+.||+... +|..+++|+...........|.+++..  +.+.+  +.+++++....    ...++||
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~--l~~~~~~vP~~~~~~~~~----~~~~~v~   94 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSW--LATTGVPCAAVLDVVTEA----GRDWLLL   94 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHH--HHTTTCCBCCEEEEEECS----SCEEEEE
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHH--HHhCCCCCCeEEEeccCC----CCCEEEE
Confidence            455444434566699999976 467899998755433444556555554  54434  45577776544    2368999


Q ss_pred             cccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhc--------------------------------------
Q psy14889        214 HYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG--------------------------------------  255 (443)
Q Consensus       214 e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~--------------------------------------  255 (443)
                      ||+++.+|.  ...  .+   ...++.+++..|..||+....                                      
T Consensus        95 e~i~G~~l~--~~~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (264)
T 1nd4_A           95 GEVPGQDLL--SSH--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP  167 (264)
T ss_dssp             ECCSSEETT--TSC--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred             EecCCcccC--cCc--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence            999998884  221  12   236778888889999875210                                      


Q ss_pred             ------------CCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        256 ------------TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       256 ------------~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                                  ....+.++|+|++|.|||++++..++|+|||.+
T Consensus       168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhc
Confidence                        011234999999999999987766789999986

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.06  E-value=5.1e-10  Score=108.83  Aligned_cols=146  Identities=13%  Similarity=0.152  Sum_probs=103.0

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEee--ccC----ccchHHHHHHHHHHhcc--CCCceeeeeeccccCCcccEEEee
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFF--SRD----EASWSRETEIYSTVLLR--HENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~--~~~----~~~~~~e~ei~~~~~l~--H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      .+.|+.|.++.||+....+..+++|+..  ...    ......|.+++..  +.  +.++.++++++.+... .+..++|
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~--L~~~~vpvP~~~~~~~~~~~-~g~~~~v  119 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDA--LAGTDVPVAKMYALCEDESV-IGRAFYI  119 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHH--HTTSSSCCCCEEEEECCTTT-TSSCEEE
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHH--hhcCCCCCCcEEEECCCCCc-cCCeEEE
Confidence            5678999999999998878889999765  221    2234445555544  54  4567788887765421 1346899


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCC-----------------------------------
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ-----------------------------------  257 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~-----------------------------------  257 (443)
                      |||+++..+.+.. -..++..+...++.++++.|..||+......                                   
T Consensus       120 me~v~G~~l~~~~-~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          120 MEFVSGRVLWDQS-LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             EECCCCBCCCCTT-CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             EEecCCeecCCCc-cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            9999988775422 1347788889999999999999998421100                                   


Q ss_pred             ---------------CCCCeEEeCCCCCCEEEcCCCc--EEEEecCCccc
Q psy14889        258 ---------------GKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVS  290 (443)
Q Consensus       258 ---------------~~~~iiHrDlk~~NiLl~~~~~--~kl~DfGla~~  290 (443)
                                     ..+.++|+|+++.|||++.++.  +.|+||+.+..
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                           1358999999999999997753  68999998853

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.78  E-value=7.6e-09  Score=98.08  Aligned_cols=144  Identities=20%  Similarity=0.127  Sum_probs=95.0

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhc-cCCC--ceeeeeeccccCCcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLL-RHEN--ILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~n--Iv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      .+.++.|.+..||+..   ..+++|+.... ......+.|...+..+ .+..  +.+.+....... .....|+|||+++
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-~~~~~~~vm~~i~   99 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-TYQMSFAGFTKIK   99 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-SCSCSCEEEECCC
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-CCCcceEEEcccC
Confidence            4568999999999863   67889975432 1122233344443334 3322  334444432221 1123478999999


Q ss_pred             cccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh-------------------------------------------
Q psy14889        218 FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF-------------------------------------------  254 (443)
Q Consensus       218 ~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~-------------------------------------------  254 (443)
                      +.+|.+... ..++..+...++.+++..|..||+...                                           
T Consensus       100 G~~l~~~~~-~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  178 (304)
T 3sg8_A          100 GVPLTPLLL-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR  178 (304)
T ss_dssp             CEECCHHHH-HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred             CeECCcccc-ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence            988865332 457888889999999999999997210                                           


Q ss_pred             ---c----CCCCCCeEEeCCCCCCEEEcC--CCcEEEEecCCccc
Q psy14889        255 ---G----TQGKPAIAHRDIKSKNILVKT--NGTCVIADFGLAVS  290 (443)
Q Consensus       255 ---~----~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGla~~  290 (443)
                         .    ....+.++|+|+++.||++++  ...+.|+||+.+..
T Consensus       179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence               0    122367899999999999998  45678999998854

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.33  E-value=4.8e-06  Score=77.00  Aligned_cols=138  Identities=14%  Similarity=0.055  Sum_probs=91.7

Q ss_pred             eeeeecCe-EEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCcc
Q psy14889        143 CIGKGRYG-EVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFG  219 (443)
Q Consensus       143 ~lG~G~fg-~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~g  219 (443)
                      .+..|..| .||+...  .+..+.+|+-..........|.+++.... .+--+.++++++.+.    ...++|||++++.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~-~~vPVP~v~~~~~~~----~~~~lvme~l~G~  105 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLT-AFMPLPTIKHFIRTP----DDAWLLTTAIPGK  105 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHT-TTSCCCCEEEEEEET----TEEEEEEECCCSE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhc-cCCCcCeEEEEEEEC----CeEEEEEEeeCCc
Confidence            34556555 6898765  35689999875544444455655554422 222355667776554    3469999999998


Q ss_pred             cHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhc--------------------------------------------
Q psy14889        220 SLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG--------------------------------------------  255 (443)
Q Consensus       220 sL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~--------------------------------------------  255 (443)
                      ++.+....   .......+..+++..|.-||+....                                            
T Consensus       106 ~~~~~~~~---~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          106 TAFQVLEE---YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             EHHHHHHH---CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             cccccccC---CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            88776532   2233456777888888888864210                                            


Q ss_pred             ------CCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        256 ------TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       256 ------~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                            ....+.++|+|+.+.|||++.++.+-|+||+.+
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence                  012335899999999999998777789999876

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.26  E-value=5.6e-06  Score=78.30  Aligned_cols=141  Identities=18%  Similarity=0.116  Sum_probs=92.0

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCC---CceeeeeeccccCCcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE---NILGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~---nIv~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      .+.++.|....||+.   |..+++|+-.. .......+.|...+..+.+.   .+.+.+.+.....   ...++||||++
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~---g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD---GNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT---SCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC---CceEEEEeccC
Confidence            456888988899987   77889997432 11122233444444435542   2445555543221   33579999999


Q ss_pred             cccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhc------------------------------------------
Q psy14889        218 FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG------------------------------------------  255 (443)
Q Consensus       218 ~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~------------------------------------------  255 (443)
                      +..|.+.. -..++..+...++.+++..|..||+....                                          
T Consensus        97 G~~l~~~~-~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~  175 (306)
T 3tdw_A           97 GQILGEDG-MAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR  175 (306)
T ss_dssp             SEECHHHH-HTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred             CeECchhh-hhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence            98887632 13456677777788888888888864220                                          


Q ss_pred             ----------CCCCCCeEEeCCCCCCEEEcC---CCc-EEEEecCCcc
Q psy14889        256 ----------TQGKPAIAHRDIKSKNILVKT---NGT-CVIADFGLAV  289 (443)
Q Consensus       256 ----------~~~~~~iiHrDlk~~NiLl~~---~~~-~kl~DfGla~  289 (443)
                                ....+.++|+|+.+.|||++.   ++. +.|+||+.+.
T Consensus       176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence                      013457899999999999987   355 5899999874

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.18  E-value=2.5e-06  Score=82.48  Aligned_cols=149  Identities=11%  Similarity=0.062  Sum_probs=89.2

Q ss_pred             cccee-eeecCeEEEEEEEC--------CceeEEEEeeccC------ccchHHHHHHHHHHhcc-CCCceeeeeeccccC
Q psy14889        140 LSECI-GKGRYGEVWRGVWH--------GENVAVKIFFSRD------EASWSRETEIYSTVLLR-HENILGYIGSDMTSR  203 (443)
Q Consensus       140 ~~~~l-G~G~fg~Vy~~~~~--------~~~vAvK~~~~~~------~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~  203 (443)
                      ..+.| +.|....+|+....        +..+++|+.....      ......|.+++....-. .-.+.++++++.+..
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            34667 88888999988765        6788999764332      13445555555442211 234566776654432


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHchh----------------------
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-------TTLNHHQMMKICLSIVNGLVHLHTEIF----------------------  254 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~----------------------  254 (443)
                      . ....++||||+++..+.+.+..       ..++..+...++.++++.|.-||+...                      
T Consensus       104 ~-~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~  182 (357)
T 3ats_A          104 V-LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHF  182 (357)
T ss_dssp             T-TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHH
T ss_pred             c-cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHH
Confidence            1 1234799999998766542210       023344444455555555555553110                      


Q ss_pred             -------------------------------cCC---CCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        255 -------------------------------GTQ---GKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       255 -------------------------------~~~---~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                                                     ...   ..+.++|+|+.+.|||++++..+.|+||+.+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          183 NWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             HHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence                                           000   14689999999999999965557899998873

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.92  E-value=8.1e-05  Score=71.02  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=27.2

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .+.++|+|+.+.|||++.++.+.|+||+.+
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            458999999999999988889999999976

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.86  E-value=8.3e-05  Score=72.82  Aligned_cols=30  Identities=17%  Similarity=0.313  Sum_probs=25.6

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      .+.++|+|+.+.|||++.+ .++|+||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            3589999999999999876 48999998764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.80  E-value=0.00012  Score=69.19  Aligned_cols=142  Identities=13%  Similarity=0.104  Sum_probs=84.3

Q ss_pred             ccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhcc-CCCceeeeeeccccCCcccEEEeeecccCc
Q psy14889        140 LSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR-HENILGYIGSDMTSRNSCTQLWLVTHYHSF  218 (443)
Q Consensus       140 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~-H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~  218 (443)
                      -.+.|+.|....+|+...++..+++|+........+..|.+.+....-. ...+.+.+++....    ...++||||+++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~----g~~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ----GHSFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS----SEEEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC----CceEEEEEeccC
Confidence            3567899999999999888889999987654333444555554442111 24566777765443    346999999998


Q ss_pred             ccHH--------HHh---cc--c--C-------------------CCHHHHH---HHHHHH-------------HHHHHH
Q psy14889        219 GSLY--------DHL---NR--T--T-------------------LNHHQMM---KICLSI-------------VNGLVH  248 (443)
Q Consensus       219 gsL~--------~~l---~~--~--~-------------------l~~~~~~---~i~~qi-------------a~gL~y  248 (443)
                      ..+.        ..|   +.  .  .                   -+|....   ++..++             ..-++.
T Consensus       116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~  195 (312)
T 3jr1_A          116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI  195 (312)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence            6541        111   11  1  0                   1233221   111111             111222


Q ss_pred             HHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       249 LH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +-...-+....|.++|+|+.+.|++++.++ +.|.||.
T Consensus       196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            221111123467999999999999999887 8899974

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.77  E-value=0.00016  Score=71.43  Aligned_cols=72  Identities=13%  Similarity=0.049  Sum_probs=45.2

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeecc-----C--c---cchHHHHHHHHHHh-ccCCCceeeeeeccccCCcccEE
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSR-----D--E---ASWSRETEIYSTVL-LRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~-----~--~---~~~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      .+.||.|..+.||+...++..++||.....     .  .   .....|.|+..... .....+.+++.+.. .     ..
T Consensus        39 i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~~-~-----~~  112 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDR-T-----MA  112 (420)
T ss_dssp             EEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEET-T-----TT
T ss_pred             EEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEECC-C-----cc
Confidence            467899999999999777788999943211     1  1   22344666655432 12234556666541 1     23


Q ss_pred             Eeeeccc-Cc
Q psy14889        210 WLVTHYH-SF  218 (443)
Q Consensus       210 ~lv~e~~-~~  218 (443)
                      ++||||+ ++
T Consensus       113 ~lv~e~l~~g  122 (420)
T 2pyw_A          113 LIGMRYLEPP  122 (420)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeecCCc
Confidence            8999999 76

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.62  E-value=0.0003  Score=66.03  Aligned_cols=132  Identities=16%  Similarity=0.051  Sum_probs=72.3

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCc-eeeeeeccccCCcccEEEeeeccc-Cc
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI-LGYIGSDMTSRNSCTQLWLVTHYH-SF  218 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nI-v~l~g~~~~~~~~~~~~~lv~e~~-~~  218 (443)
                      .+.|+.|....+|+.    ..+++|+..........++.|...+..+...++ .+++++..+.      -++++||+ ++
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~------~~~v~e~i~~g   92 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDPAT------GVMVTRYIAGA   92 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECTTT------CCEEEECCTTC
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEECCC------CEEEEeecCCC
Confidence            677889999999998    678889775432222223333333332322222 3555543222      16899999 55


Q ss_pred             ccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh--------------------------------------------
Q psy14889        219 GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF--------------------------------------------  254 (443)
Q Consensus       219 gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~--------------------------------------------  254 (443)
                      .+|....-.      ....++.++++.|+-||+...                                            
T Consensus        93 ~~l~~~~~~------~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l  166 (301)
T 3dxq_A           93 QTMSPEKFK------TRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL  166 (301)
T ss_dssp             EECCHHHHH------HSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhHh------hhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence            444210000      000123333333344443210                                            


Q ss_pred             -cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        255 -GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       255 -~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                       .....+.++|+|+.+.||+ ..++.+.|+||..+.
T Consensus       167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             HhcCCCceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence             0123456899999999999 566778999998874

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.50  E-value=0.00096  Score=62.09  Aligned_cols=75  Identities=13%  Similarity=0.079  Sum_probs=47.3

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc---cchHHHHHHHHHHhccCC---CceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHE---NILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~---nIv~l~g~~~~~~~~~~~  208 (443)
                      ..+.-.+.+|.|..+.||+... +|+.|.||+......   ..+..|.+.+..  +.-.   -+.+.+++.   .     
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~--L~~~~~vpvP~v~~~~---~-----   84 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDW--LGRSFGSPVPQVAGWD---D-----   84 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHH--HTCSTTCCSCCEEEEE---T-----
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHH--HHhhCCCCcceEEecc---C-----
Confidence            3455678899999999999998 789999997644322   123344444443  4321   234444432   1     


Q ss_pred             EEeeecccCccc
Q psy14889        209 LWLVTHYHSFGS  220 (443)
Q Consensus       209 ~~lv~e~~~~gs  220 (443)
                      -++||||..++.
T Consensus        85 ~~lv~e~l~~~~   96 (288)
T 3f7w_A           85 RTLAMEWVDERP   96 (288)
T ss_dssp             TEEEEECCCCCC
T ss_pred             ceEEEEeecccC
Confidence            168999987654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.47  E-value=0.00073  Score=64.27  Aligned_cols=31  Identities=26%  Similarity=0.351  Sum_probs=27.1

Q ss_pred             CCCeEEeCCCCCCEEEcCC----CcEEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTN----GTCVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla~  289 (443)
                      .+.++|+|+.+.|||++.+    ..+.|+||+.+.
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            4589999999999999875    689999999874

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.23  E-value=0.0013  Score=62.10  Aligned_cols=147  Identities=8%  Similarity=0.005  Sum_probs=76.0

Q ss_pred             cceeeeecCeEEEEEEECCceeEEEEeecc-CccchHHHHHHHHHHhccCCCceeeeeeccccC--CcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHGENVAVKIFFSR-DEASWSRETEIYSTVLLRHENILGYIGSDMTSR--NSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~-~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~--~~~~~~~lv~e~~~  217 (443)
                      .+.|+.|....+|+...++..+++|+.... .......|.++.....-+.-.+.+++.......  ......+++++|++
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~  106 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE  106 (322)
T ss_dssp             EEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred             eeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence            456777888999999886668899987652 233444455554442211111233332110000  00134588999998


Q ss_pred             cccHHH-----------H---hcc--cCC--------C---HHHHHH------------HHHHHHHHHHHHHHchhcCCC
Q psy14889        218 FGSLYD-----------H---LNR--TTL--------N---HHQMMK------------ICLSIVNGLVHLHTEIFGTQG  258 (443)
Q Consensus       218 ~gsL~~-----------~---l~~--~~l--------~---~~~~~~------------i~~qia~gL~yLH~~~~~~~~  258 (443)
                      +..+..           .   ++.  ..+        .   |.....            +...+...++++.... ....
T Consensus       107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~-~~~~  185 (322)
T 2ppq_A          107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW-PKDL  185 (322)
T ss_dssp             CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC-CCSS
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC-cccC
Confidence            754311           0   111  010        1   111100            0112444556665431 1122


Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .++++|+|+.+.|||++.+..+.|+||+.+
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a  215 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFA  215 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhc
Confidence            458999999999999998766689999876

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.16  E-value=0.0044  Score=61.70  Aligned_cols=73  Identities=14%  Similarity=0.051  Sum_probs=43.5

Q ss_pred             cceeeeecCeEEEEEEECC--ceeEEEEeeccCccchHHHHHHHHHHhccCCCc-eeeeeeccccCCcccEEEeeecccC
Q psy14889        141 SECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENI-LGYIGSDMTSRNSCTQLWLVTHYHS  217 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~~--~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nI-v~l~g~~~~~~~~~~~~~lv~e~~~  217 (443)
                      .+.|+.|-...+|+....+  ..+++|+..........++.|...+..+...++ .++++.+.   +     .+|+||++
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~---~-----G~v~e~I~  184 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT---N-----GRIEEFMD  184 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET---T-----EEEEECCC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC---C-----eEEEEeeC
Confidence            4568888889999998865  788999764332222333444444444554444 45666652   1     25999998


Q ss_pred             cccH
Q psy14889        218 FGSL  221 (443)
Q Consensus       218 ~gsL  221 (443)
                      +.+|
T Consensus       185 G~~l  188 (458)
T 2qg7_A          185 GYAL  188 (458)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            7444

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.06  E-value=0.0013  Score=63.57  Aligned_cols=30  Identities=20%  Similarity=0.339  Sum_probs=24.6

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      .+.++|+|+.+.|||++++. +.|+||..+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            34789999999999997655 8999998763

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.05  E-value=0.0023  Score=63.28  Aligned_cols=71  Identities=14%  Similarity=0.181  Sum_probs=42.9

Q ss_pred             cceeeeecCeEEEEEEEC---------CceeEEEEeeccCc-cchHHHHHHHHHHhccCCCc-eeeeeeccccCCcccEE
Q psy14889        141 SECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENI-LGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nI-v~l~g~~~~~~~~~~~~  209 (443)
                      .+.|+.|-...||+....         +..+++|+...... .....|..++..  +...++ .++++.+..        
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~--L~~~g~~P~l~~~~~~--------  147 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTL--LSERHLGPKLYGIFSG--------  147 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHH--HHHTTSSSCEEEEETT--------
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHH--HHhCCCCCcEEEEeCC--------
Confidence            456888888999999874         46889998743222 333345544443  332233 456665421        


Q ss_pred             EeeecccCcccH
Q psy14889        210 WLVTHYHSFGSL  221 (443)
Q Consensus       210 ~lv~e~~~~gsL  221 (443)
                      .+|+||+++.+|
T Consensus       148 g~v~e~l~G~~l  159 (429)
T 1nw1_A          148 GRLEEYIPSRPL  159 (429)
T ss_dssp             EEEECCCCEEEC
T ss_pred             CEEEEEeCCccc
Confidence            388999876443

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=96.97  E-value=0.00071  Score=42.80  Aligned_cols=33  Identities=18%  Similarity=0.439  Sum_probs=23.0

Q ss_pred             hhhhhHHhHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy14889         47 ILKLSMAILGPVIVLGMLAAVIVLFMRRNHRKK   79 (443)
Q Consensus        47 ~~~i~~~i~~~~~~l~~~~~~~~~~~~~~~~~~   79 (443)
                      ...|+.++++++++++++++++++++||+++++
T Consensus         9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A            9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             cceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            345888888888887777777666666665543

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.96  E-value=0.006  Score=53.70  Aligned_cols=98  Identities=17%  Similarity=0.236  Sum_probs=62.6

Q ss_pred             ccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCC
Q psy14889        219 GSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN  296 (443)
Q Consensus       219 gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~  296 (443)
                      -||.+.|+  +.++++++++.++.|.+.+|.-+-...     . + ..+=+-|..|++..+|.+.+.+ ..+.       
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~-----~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR-----Q-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT-----C-C-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc-----c-C-CceecCCcceEEecCCceeccc-cccc-------
Confidence            47899885  588999999999999999887652110     0 1 1223346888999999888764 2110       


Q ss_pred             cCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhc
Q psy14889        297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR  347 (443)
Q Consensus       297 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg  347 (443)
                               .....+.|||....       ..+.+.=|||+|+++|.-+--
T Consensus        98 ---------~~~~~~~~pe~~~~-------~~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A           98 ---------AGEPPPVAGKLGYS-------QCMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             ------------------CCSSS-------SSCHHHHHHHHHHHHHHHHTT
T ss_pred             ---------ccccCCCChhhccc-------cchHHHHHHHHHHHHHHHhhc
Confidence                     01124678887642       344678899999999998753

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=96.95  E-value=0.00052  Score=43.57  Aligned_cols=31  Identities=32%  Similarity=0.514  Sum_probs=22.2

Q ss_pred             hhhhHHhHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14889         48 LKLSMAILGPVIVLGMLAAVIVLFMRRNHRK   78 (443)
Q Consensus        48 ~~i~~~i~~~~~~l~~~~~~~~~~~~~~~~~   78 (443)
                      ..|+.++++++++++++++++++++||++++
T Consensus        11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            3578888888888877777766666665544

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.52  E-value=0.019  Score=54.15  Aligned_cols=29  Identities=24%  Similarity=0.214  Sum_probs=25.0

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      .+.++|+|+++.|||++ + .+.|+||+.+.
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            45789999999999998 4 89999998763

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.45  E-value=0.0074  Score=59.35  Aligned_cols=140  Identities=12%  Similarity=0.112  Sum_probs=79.3

Q ss_pred             cceeeeecCeEEEEEEEC---------CceeEEEEeeccCccchHHHHHHHHHHhccCCC-ceeeeeeccccCCcccEEE
Q psy14889        141 SECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN-ILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~n-Iv~l~g~~~~~~~~~~~~~  210 (443)
                      .+.|..|-...+|+....         +..+++|+..........++.|...+..+.-.+ ..++++.+.   +     +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---~-----~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP---E-----G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET---T-----E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC---C-----C
Confidence            456777888899999875         678999986443322233334444333343222 344554321   1     6


Q ss_pred             eeecccCcccHHH--------------Hh---cc--c---CC---------CHHHHHHHHHHH-----------------
Q psy14889        211 LVTHYHSFGSLYD--------------HL---NR--T---TL---------NHHQMMKICLSI-----------------  242 (443)
Q Consensus       211 lv~e~~~~gsL~~--------------~l---~~--~---~l---------~~~~~~~i~~qi-----------------  242 (443)
                      +|+||+++..|..              .|   +.  .   .+         -+.++.++..++                 
T Consensus       147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~  226 (424)
T 3mes_A          147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS  226 (424)
T ss_dssp             EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred             EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence            8999998865321              01   10  0   11         133443333322                 


Q ss_pred             --HHHHHHHHHchh----------------cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        243 --VNGLVHLHTEIF----------------GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       243 --a~gL~yLH~~~~----------------~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                        ...+.+|....-                .......++|+|+.+.||+ +.++.+.|+||..|.
T Consensus       227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence              233445543321                1122457899999999999 788899999998873

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.37  E-value=0.011  Score=57.18  Aligned_cols=138  Identities=14%  Similarity=0.133  Sum_probs=74.5

Q ss_pred             ceeeeecCeEEEEEEEC---------CceeEEEEeeccC--ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        142 ECIGKGRYGEVWRGVWH---------GENVAVKIFFSRD--EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~--~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      +.|..|-...+|+....         ++.+++|+.-...  .....+|.+++.... .+.-..++++.+.+        .
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~-~~gv~P~ll~~~~~--------g  126 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILA-ERSLGPQLYGVFPE--------G  126 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHH-HTTSSCCEEEEETT--------E
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHH-hcCCCCeEEEEcCC--------c
Confidence            45766888899998763         3678999753211  122334544444321 12222456665432        2


Q ss_pred             eeecccCcccHHH--------------Hh---ccc------CC--CHHHHHHHHHHHHH-------------------HH
Q psy14889        211 LVTHYHSFGSLYD--------------HL---NRT------TL--NHHQMMKICLSIVN-------------------GL  246 (443)
Q Consensus       211 lv~e~~~~gsL~~--------------~l---~~~------~l--~~~~~~~i~~qia~-------------------gL  246 (443)
                      +||||+++..|..              .|   +..      ..  -+.++.++..++..                   .+
T Consensus       127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~  206 (379)
T 3feg_A          127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM  206 (379)
T ss_dssp             EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred             cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence            8899998755431              01   111      11  13445555544322                   23


Q ss_pred             HHHHHchhcCCCCCCeEEeCCCCCCEEEcCC----CcEEEEecCCc
Q psy14889        247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTN----GTCVIADFGLA  288 (443)
Q Consensus       247 ~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~----~~~kl~DfGla  288 (443)
                      ..|....-.......++|+|+.+.|||++.+    +.+.|+||..+
T Consensus       207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a  252 (379)
T 3feg_A          207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS  252 (379)
T ss_dssp             HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred             HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence            4444332112234578999999999999877    68999999876

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=96.13  E-value=0.0052  Score=38.74  Aligned_cols=29  Identities=21%  Similarity=0.552  Sum_probs=14.0

Q ss_pred             hhhHHhHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14889         49 KLSMAILGPVIVLGMLAAVIVLFMRRNHRK   78 (443)
Q Consensus        49 ~i~~~i~~~~~~l~~~~~~~~~~~~~~~~~   78 (443)
                      .++.++++ ++++++++++++++.|||+.+
T Consensus        13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred             chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence            45555555 444444444444555544433

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.61  E-value=0.093  Score=49.79  Aligned_cols=32  Identities=28%  Similarity=0.421  Sum_probs=28.0

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      .+.++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45899999999999999888899999987743

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=92.78  E-value=0.19  Score=48.86  Aligned_cols=29  Identities=24%  Similarity=0.446  Sum_probs=24.3

Q ss_pred             CeEEeCCCCCCEEE------cCCCcEEEEecCCcc
Q psy14889        261 AIAHRDIKSKNILV------KTNGTCVIADFGLAV  289 (443)
Q Consensus       261 ~iiHrDlk~~NiLl------~~~~~~kl~DfGla~  289 (443)
                      .++|+|+.+.|||+      +++..+.++||.+|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46799999999999      445679999998873

>4fao_E Activin receptor type-2B; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens}

Probab=92.33  E-value=0.032  Score=43.97  Aligned_cols=24  Identities=29%  Similarity=0.684  Sum_probs=18.7

Q ss_pred             CCeeEecCCCCCCCCCCCCCCCCC
Q psy14889         10 GQFTIQCCDGDFCNNGSFPILPPS   33 (443)
Q Consensus        10 ~~~~~~~~~~~~c~~~~~~~~~~~   33 (443)
                      .+.+||||.|++||.+++..+++.
T Consensus        81 ~~~~fCCC~gdlCN~nfs~~p~~~  104 (124)
T 4fao_E           81 PQVYFCCCEGNFCNERFTHLPEAG  104 (124)
T ss_dssp             CSEEEEEECSTTTTSSEEECC---
T ss_pred             CCcEEEecCCCccCCceeecCCCC
Confidence            579999999999999987766544

>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1

Probab=92.27  E-value=0.045  Score=32.55  Aligned_cols=29  Identities=17%  Similarity=0.441  Sum_probs=13.9

Q ss_pred             hhhhhhHHhHHHHHHHHHHHHHHHHHHHHh
Q psy14889         46 YILKLSMAILGPVIVLGMLAAVIVLFMRRN   75 (443)
Q Consensus        46 ~~~~i~~~i~~~~~~l~~~~~~~~~~~~~~   75 (443)
                      ....++.++++ +++++++.+.+.++.|||
T Consensus         6 ~~~sIaagVvg-lll~vii~l~~~~~iRRr   34 (35)
T 1iij_A            6 PVTFIIATVVG-VLLFLILVVVVGILIKRR   34 (35)
T ss_dssp             HHHHHHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred             CCcEeHHHHHH-HHHHHHHHHHhheEEeec
Confidence            34446666666 444444444444444443

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=90.32  E-value=0.39  Score=29.29  Aligned_cols=11  Identities=18%  Similarity=0.410  Sum_probs=4.2

Q ss_pred             HHHHHHHHHHH
Q psy14889         61 LGMLAAVIVLF   71 (443)
Q Consensus        61 l~~~~~~~~~~   71 (443)
                      +++++++++++
T Consensus        24 v~li~~l~~~~   34 (38)
T 2k1k_A           24 AALLLGILVFR   34 (38)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            33333333333

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=89.72  E-value=0.16  Score=31.71  Aligned_cols=16  Identities=19%  Similarity=0.059  Sum_probs=8.7

Q ss_pred             hhhhhHHhHHHHHHHH
Q psy14889         47 ILKLSMAILGPVIVLG   62 (443)
Q Consensus        47 ~~~i~~~i~~~~~~l~   62 (443)
                      ...|+.++++++++++
T Consensus        12 ~~~I~~~vv~Gv~ll~   27 (41)
T 2k9y_A           12 NLAVIGGVAVGVVLLL   27 (41)
T ss_dssp             STHHHHHHHHHHHHHH
T ss_pred             eEEEEeehhHHHHHHH
Confidence            3445666666555543

>1bte_A Protein (activin receptor type II); serine kinase, ligand binding domain, three-finger transferase; HET: NAG; 1.50A {Mus musculus} SCOP: g.7.1.3 PDB: 2goo_C* 1lx5_B*

Probab=89.30  E-value=0.071  Score=40.26  Aligned_cols=22  Identities=23%  Similarity=0.570  Sum_probs=18.8

Q ss_pred             CCeeEecCCCCCCCCCCCCCCC
Q psy14889         10 GQFTIQCCDGDFCNNGSFPILP   31 (443)
Q Consensus        10 ~~~~~~~~~~~~c~~~~~~~~~   31 (443)
                      +++.||||.|++||..+...|+
T Consensus        74 ~~~~fCCC~gd~CN~nft~~p~   95 (97)
T 1bte_A           74 PEVYFCCCEGNMCNEKFSYFPE   95 (97)
T ss_dssp             CSSEEEEECSTTGGGSEEECCC
T ss_pred             CCEEEEECCCCccccCcccCCC
Confidence            6899999999999998776543

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=86.48  E-value=0.79  Score=30.14  Aligned_cols=26  Identities=8%  Similarity=0.167  Sum_probs=16.5

Q ss_pred             hhhhhhHHhHHHHHHHHHHHHHHHHH
Q psy14889         46 YILKLSMAILGPVIVLGMLAAVIVLF   71 (443)
Q Consensus        46 ~~~~i~~~i~~~~~~l~~~~~~~~~~   71 (443)
                      ..|.|+++++++++++++++++++-+
T Consensus         8 p~WiIi~svl~GLLLL~Lii~~LwK~   33 (54)
T 2l8s_A            8 PLWVILLSAFAGLLLLMLLILALWKI   33 (54)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            35667777777777666666555533

>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}

Probab=85.94  E-value=0.52  Score=32.13  Aligned_cols=25  Identities=32%  Similarity=0.466  Sum_probs=10.8

Q ss_pred             hHHHHHHHHHH-HHHHHHHHHHhhhh
Q psy14889         54 ILGPVIVLGML-AAVIVLFMRRNHRK   78 (443)
Q Consensus        54 i~~~~~~l~~~-~~~~~~~~~~~~~~   78 (443)
                      ++|+++.++++ .+.++++.++++|+
T Consensus        13 vlGg~~~lll~~glcI~ccvkcrhRr   38 (70)
T 2klu_A           13 VLGGVAGLLLFIGLGIFFSVRSRHRR   38 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCCS
T ss_pred             HHhHHHHHHHHHHHHHHHhhHHHHHH
Confidence            44444444433 34444444444444

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=85.65  E-value=0.43  Score=41.77  Aligned_cols=85  Identities=12%  Similarity=0.076  Sum_probs=60.7

Q ss_pred             ccCCCceeeeeeccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       187 l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                      ..||+.+.. .+-.+.+    .  ++..|-...+...+-.-..++...+++++.+|+.-..++++.          +|--
T Consensus        42 ~~~~~Fl~~-~I~e~eD----~--v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~r----------~tf~  104 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRD----S--FQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTR----------YTFV  104 (215)
T ss_dssp             SCCTTBCCE-EEEECSS----E--EEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGSS----------EECC
T ss_pred             ccCCcccce-EEEEccc----E--EEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcCc----------eEEE
Confidence            578888855 2322332    2  333443334444444446688999999999999887777655          8999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCc
Q psy14889        267 IKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |.|+|++++.++.+++.-.|+-
T Consensus       105 L~P~NL~f~~~~~p~i~~RGik  126 (215)
T 4ann_A          105 LAPDELFFTRDGLPIAKTRGLQ  126 (215)
T ss_dssp             CSGGGEEECTTSCEEESCCEET
T ss_pred             EecceEEEcCCCCEEEEEccCc
Confidence            9999999999999999988864

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=85.17  E-value=1.1  Score=29.62  Aligned_cols=26  Identities=19%  Similarity=0.300  Sum_probs=16.0

Q ss_pred             hhhhhhHHhHHHHHHHHHHHHHHHHH
Q psy14889         46 YILKLSMAILGPVIVLGMLAAVIVLF   71 (443)
Q Consensus        46 ~~~~i~~~i~~~~~~l~~~~~~~~~~   71 (443)
                      ..|.|+++++++++++++++++++-+
T Consensus        11 p~wiIi~svl~GLllL~li~~~LwK~   36 (54)
T 2knc_A           11 PIWWVLVGVLGGLLLLTILVLAMWKV   36 (54)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            35566677777776666665555533

>4fao_C Serine/threonine-protein kinase receptor R3; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens} PDB: 2lcr_A

Probab=80.45  E-value=1.2  Score=34.14  Aligned_cols=29  Identities=24%  Similarity=0.560  Sum_probs=21.3

Q ss_pred             ccccCCCCCeeEecCCCCCCCCCCCCCCC
Q psy14889          3 SCHSVNVGQFTIQCCDGDFCNNGSFPILP   31 (443)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~   31 (443)
                      .|++...+.+..-||.+|+||.+..+.+|
T Consensus        57 ~C~~s~~~~~~i~CC~tDfCN~~l~p~Lp   85 (106)
T 4fao_C           57 LCRGRPTEFVNHYCCDSHLCNHNVSLVLE   85 (106)
T ss_dssp             GGGCCCCSSEEEEEECSTTTTSSCCCCCC
T ss_pred             ccCCCCCCceEEEecCccccCCCCCcCcc
Confidence            47766666788888899999976555543

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=80.18  E-value=3  Score=30.01  Aligned_cols=24  Identities=25%  Similarity=0.607  Sum_probs=13.8

Q ss_pred             hhhhhHHhHHHHHHHHHHHHHHHH
Q psy14889         47 ILKLSMAILGPVIVLGMLAAVIVL   70 (443)
Q Consensus        47 ~~~i~~~i~~~~~~l~~~~~~~~~   70 (443)
                      .+.|+++++++++++.+++++++-
T Consensus        10 ~~~Iv~gvi~gilliGllllliwk   33 (79)
T 2knc_B           10 ILVVLLSVMGAILLIGLAALLIWK   33 (79)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHH
Confidence            445666666666665555544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	443
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-88
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-45
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-41
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-39
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-38
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-37
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-36
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-36
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-35
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-35
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-35
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-35
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-34
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-33
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-33
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-33
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-32
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-32
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-32
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-32
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-32
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-32
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-32
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-32
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-31
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-31
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-31
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-30
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-30
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-30
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-30
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-30
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-30
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-29
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-29
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-29
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-29
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-28
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-27
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-27
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-26
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-26
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-25
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-24
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-24
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-24
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-24
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-23
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-23
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-23
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-23
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-23
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-23
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-23
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-23
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-22
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-22
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-21
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-21
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-18
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-16
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-13
d2h62c1	84	g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Hum	6e-04

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  269 bits (689), Expect = 1e-88
 Identities = 184/296 (62%), Positives = 225/296 (76%)

Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL 193
           +A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENIL
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
           G+I +D     + TQLWLV+ YH  GSL+D+LNR T+    M+K+ LS  +GL HLH EI
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
            GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV +   ++ +DI PN RVGTKRYM+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE+LD+SINM  FESFK+ADIYA+GLV WE+ RR    GI E+Y+ PY+DLVP DPS ++
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           MRKV+C  + RP +PNRW S   L  M K+M+ECW+ N   RL+ALR+KKTL +L+
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (394), Expect = 5e-45
 Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 40/298 (13%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENIL 193
           QI++ + IG G +G V++G WHG+ VAVK+           +    E+      RH NIL
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
            ++G       +  QL +VT +    SLY HL    T     +++ I      G+ +LH 
Sbjct: 68  LFMGYS-----TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH- 121

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                    +I HRD+KS NI +  + T  I DFGLA   S+ S           G+  +
Sbjct: 122 -------AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 172

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           M+PE++      D      ++D+YA G+VL+E+             + PY ++       
Sbjct: 173 MAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTG----------QLPYSNINNR---- 215

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           D +  ++      P L       +   AM ++M EC  +  + R    ++  ++  LA
Sbjct: 216 DQIIFMVGRGYLSPDLSKVR--SNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 3e-41
 Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 48/293 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
           K++ L + IGKG +G+V  G + G  VAVK     D  + +   E      LRH N++  
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 65

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           +G  +  +     L++VT Y + GSL D+L    R+ L    ++K  L +   + +L   
Sbjct: 66  LGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-- 120

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                      HRD+ ++N+LV  +    ++DFGL    S   +   +P        ++ 
Sbjct: 121 ------GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-------KWT 167

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE L E       +   K+D+++ G++LWE         I+   + PY  +        
Sbjct: 168 APEALREK------KFSTKSDVWSFGILLWE---------IYSFGRVPYPRI-----PLK 207

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
           D+   +     +   P+          + +VMK CWH +A +R S L++++ L
Sbjct: 208 DVVPRVE-KGYKMDAPDGCPPA-----VYEVMKNCWHLDAAMRPSFLQLREQL 254

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-39
 Identities = 63/287 (21%), Positives = 124/287 (43%), Gaps = 41/287 (14%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGYIGS 198
             +G G +G+V++          A K+  ++ E        EI       H NI+  + +
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGT 256
                N    LW++  + + G++   +      L   Q+  +C   ++ L +LH      
Sbjct: 78  FYYENN----LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH------ 127

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                I HRD+K+ NIL   +G   +ADFG++   ++   +     +  +GT  +M+PE+
Sbjct: 128 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR----DSFIGTPYWMAPEV 181

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
           +    + D    + KAD+++LG+ L E+           E + P+H+L PM      + K
Sbjct: 182 VMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNPM----RVLLK 226

Query: 377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
           +   +      P+RW S+         +K+C  +N + R +  ++ +
Sbjct: 227 IAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDARWTTSQLLQ 268

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 2e-38
 Identities = 63/291 (21%), Positives = 108/291 (37%), Gaps = 45/291 (15%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRE---TEIYSTVLLRHENILG 194
               IG+G +  V++G+       VA      R      R+    E      L+H NI+ 
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEI 253
           +  S  ++      + LVT   + G+L  +L R   +    +   C  I+ GL  LHT  
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR- 131

Query: 254 FGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 P I HRD+K  NI +    G+  I D GLA        K        +GT  +M
Sbjct: 132 -----TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA------VIGTPEFM 180

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+ +E  +       +  D+YA G+ + E+             + PY +       + 
Sbjct: 181 APEMYEEKYD-------ESVDVYAFGMCMLEMATS----------EYPYSECQNAAQIYR 223

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
                      +P   ++         + ++++ C  QN + R S   +  
Sbjct: 224 -----RVTSGVKPASFDKVAIPE----VKEIIEGCIRQNKDERYSIKDLLN 265

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 8e-37
 Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 48/295 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L E +G G++GEVW G ++G   VAVK       +  +   E      L+H+ ++ 
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHT 251
                     +   ++++T Y   GSL D L   +   L  ++++ +   I  G+  +  
Sbjct: 73  LYAVV-----TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +    HRD+++ NILV    +C IADFGLA     + +             ++
Sbjct: 127 -------ERNYIHRDLRAANILVSDTLSCKIADFGLA---RLIEDNEYTAREGAKFPIKW 176

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
            +PE ++            K+D+++ G++L E+    +                   P  
Sbjct: 177 TAPEAINYGTFT------IKSDVWSFGILLTEIVTHGR----------------IPYPGM 214

Query: 372 DDMRKVICIDQ-QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
            +   +  +++  R V P+    +     + ++M+ CW +    R +   ++  L
Sbjct: 215 TNPEVIQNLERGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 3e-36
 Identities = 56/297 (18%), Positives = 111/297 (37%), Gaps = 44/297 (14%)

Query: 136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
            +++  + IG G++G V  G W + + VA+K       +      E    + L H  ++ 
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTE 252
             G  +        + LV  +   G L D+L           ++ +CL +  G+ +L   
Sbjct: 65  LYGVCLEQAP----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 118

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 +  + HRD+ ++N LV  N    ++DFG+      + +             ++ 
Sbjct: 119 ------EACVIHRDLAARNCLVGENQVIKVSDFGM---TRFVLDDQYTSSTGTKFPVKWA 169

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           SPE+   S          K+D+++ G+++WEV    K                    +  
Sbjct: 170 SPEVFSFSRYS------SKSDVWSFGVLMWEVFSEGK----------------IPYENRS 207

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
           +   V  I     +   R  S      + ++M  CW +    R +  R+ + L ++A
Sbjct: 208 NSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (333), Expect = 6e-36
 Identities = 65/295 (22%), Positives = 108/295 (36%), Gaps = 50/295 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSR-ETEIYSTVLLRH 189
           K  S    IG G +G V+        E VA+K       +    W     E+     LRH
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVH 248
            N + Y G  +         WLV  Y    +      ++  L   ++  +    + GL +
Sbjct: 75  PNTIQYRGCYLREHT----AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           LH           + HRD+K+ NIL+   G   + DFG A         +  P N  VGT
Sbjct: 131 LH--------SHNMIHRDVKAGNILLSEPGLVKLGDFGSA--------SIMAPANSFVGT 174

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             +M+PE++     MD  +   K D+++LG+   E+  R          K P  ++  M 
Sbjct: 175 PYWMAPEVIL---AMDEGQYDGKVDVWSLGITCIELAER----------KPPLFNMNAM- 220

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
                +  +     + P L +   S+         +  C  +    R ++  + K
Sbjct: 221 ---SALYHI--AQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLLK 266

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (329), Expect = 1e-35
 Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 44/285 (15%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGYIGS 198
           E IG+G  G V+  +    G+ VA++    + +        EI      ++ NI+ Y+ S
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
            +        LW+V  Y + GSL D +  T ++  Q+  +C   +  L  LH+       
Sbjct: 86  YLVGDE----LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN------ 135

Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
              + HRDIKS NIL+  +G+  + DFG     +   +K     +  VGT  +M+PE++ 
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPYWMAPEVVT 189

Query: 319 ESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVI 378
                       K DI++LG++  E+             + PY +  P+      +  + 
Sbjct: 190 RK------AYGPKVDIWSLGIMAIEMIEG----------EPPYLNENPL----RALYLIA 229

Query: 379 CIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
                    P   +S    +     +  C   +   R SA  + +
Sbjct: 230 TNGTPELQNP-EKLSAIFRD----FLNRCLDMDVEKRGSAKELLQ 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 3e-35
 Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 48/298 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWH-GENVAVKIFF--SRDEASWSRETEIYSTVLLRHENI 192
           K ++  + +G G++G V  G W    +VA+K+    S  E  +  E ++     L HE +
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN--LSHEKL 61

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLH 250
           +   G     R     ++++T Y + G L ++L   R      Q++++C  +   + +L 
Sbjct: 62  VQLYGVCTKQRP----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                        HRD+ ++N LV   G   ++DFGL+     + +             R
Sbjct: 118 --------SKQFLHRDLAARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGSKFPVR 166

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           +  PE+L  S          K+DI+A G+++WE+             K PY         
Sbjct: 167 WSPPEVLMYSKFS------SKSDIWAFGVLMWEIYSL---------GKMPYER------- 204

Query: 371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           F +      I Q   +      S+     +  +M  CWH+ A+ R +   +   ++ +
Sbjct: 205 FTNSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILDV 258

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 6e-35
 Identities = 57/312 (18%), Positives = 106/312 (33%), Gaps = 50/312 (16%)

Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRE--TEIYSTVLLRHENILG 194
                +G G  G V++      G  +A K+     + +   +   E+          I+G
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEI 253
           + G+  +       + +   +   GSL   L +   +    + K+ ++++ GL +L    
Sbjct: 69  FYGAFYSDGE----ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-- 122

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                K  I HRD+K  NILV + G   + DFG++          D   N  VGT+ YMS
Sbjct: 123 -----KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI------DSMANSFVGTRSYMS 171

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC---------------------RRTKANG 352
           PE L  +          ++DI+++GL L E+                          A  
Sbjct: 172 PERLQGT------HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225

Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK-VMKECWHQN 411
                + P   L            +  +       P   +     +   +  + +C  +N
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285

Query: 412 ANVRLSALRVKK 423
              R    ++  
Sbjct: 286 PAERADLKQLMV 297

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 8e-35
 Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 46/292 (15%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
             IG G YG   +      G+ +  K           ++    E+     L+H NI+ Y 
Sbjct: 10  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHT 251
              +   N+   L++V  Y   G L   +      R  L+   ++++   +   L   H 
Sbjct: 70  DRIIDRTNTT--LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 127

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
              G      + HRD+K  N+ +       + DFGLA   +  ++         VGT  Y
Sbjct: 128 RSDGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA----KAFVGTPYY 180

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           MSPE ++           +K+DI++LG +L+E+C              P+        S 
Sbjct: 181 MSPEQMNRM------SYNEKSDIWSLGCLLYELCAL----------MPPFTAF-----SQ 219

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
            ++   I  + +   +P R+  +     + +++    +     R S   + +
Sbjct: 220 KELAGKIR-EGKFRRIPYRYSDE-----LNEIITRMLNLKDYHRPSVEEILE 265

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 1e-34
 Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 43/289 (14%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGY 195
           L + +G+G YGEV   V     E VAVKI   +         + EI    +L HEN++ +
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G            +L   Y S G L+D +     +      +    ++ G+V+LH    
Sbjct: 69  YGHRREG----NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 120

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  I HRDIK +N+L+       I+DFGLA  +    N  +   N   GT  Y++P
Sbjct: 121 ----GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAP 174

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E+L            +  D+++ G+VL  +                            D 
Sbjct: 175 ELLKRREFHA-----EPVDVWSCGIVLTAMLAGE-----------------LPWDQPSDS 212

Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
            +     +++    N W      +A   ++ +   +N + R++   +KK
Sbjct: 213 CQEYSDWKEKKTYLNPWKKID--SAPLALLHKILVENPSARITIPDIKK 259

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 1e-33
 Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 46/294 (15%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
           + + L   +G+G +GEVW G W+G   VA+K       +  +   E      LRHE ++ 
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH---QMMKICLSIVNGLVHLHT 251
                     S   +++VT Y S GSL D L   T  +    Q++ +   I +G+ ++  
Sbjct: 77  LYAVV-----SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 130

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +    HRD+++ NILV  N  C +ADFGLA     + +             ++
Sbjct: 131 -------RMNYVHRDLRAANILVGENLVCKVADFGLA---RLIEDNEYTARQGAKFPIKW 180

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
            +PE               K+D+++ G++L E         +  + + PY  +V      
Sbjct: 181 TAPEAALYG------RFTIKSDVWSFGILLTE---------LTTKGRVPYPGMVNR---- 221

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
            ++   +    + P  P     +S    +  +M +CW +    R +   ++  L
Sbjct: 222 -EVLDQVERGYRMPCPPE--CPES----LHDLMCQCWRKEPEERPTFEYLQAFL 268

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (316), Expect = 2e-33
 Identities = 63/311 (20%), Positives = 110/311 (35%), Gaps = 49/311 (15%)

Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRE--TEIYSTVLLRHE 190
           +  +E IG+G +G V+ G     +      AVK      +     +  TE        H 
Sbjct: 29  VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88

Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVH 248
           N+L  +G  + S  S     +V  Y   G L + +           ++   L +  G+  
Sbjct: 89  NVLSLLGICLRSEGS---PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 145

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L              HRD+ ++N ++    T  +ADFGLA                    
Sbjct: 146 LA--------SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 197

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            ++M+ E L             K+D+++ G++LWE         +      PY D+   D
Sbjct: 198 VKWMALESLQTQKFT------TKSDVWSFGVLLWE---------LMTRGAPPYPDVNTFD 242

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL--- 425
                    + + Q R +L   +  D     + +VM +CWH  A +R S   +   +   
Sbjct: 243 -------ITVYLLQGRRLLQPEYCPDP----LYEVMLKCWHPKAEMRPSFSELVSRISAI 291

Query: 426 IKLACADMYIH 436
                 + Y+H
Sbjct: 292 FSTFIGEHYVH 302

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 4e-33
 Identities = 54/299 (18%), Positives = 108/299 (36%), Gaps = 49/299 (16%)

Query: 136 KQISLSE-CIGKGRYGEVWRGVWH----GENVAVKIFFSRDEASWSRE---TEIYSTVLL 187
           K ++L +  +G G +G V +G +      + VAVKI  +       ++    E      L
Sbjct: 6   KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 65

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGL 246
            +  I+  IG             LV      G L  +L +   +    ++++   +  G+
Sbjct: 66  DNPYIVRMIGICE-----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 120

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
            +L              HRD+ ++N+L+ T     I+DFGL+ +                
Sbjct: 121 KYLEES--------NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHGK 171

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
              ++ +PE ++            K+D+++ G+++WE          F   + PY  +  
Sbjct: 172 WPVKWYAPECINYYKFS------SKSDVWSFGVLMWE---------AFSYGQKPYRGMKG 216

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
                 ++  ++    +R   P     +     M  +M  CW  +   R     V+  L
Sbjct: 217 S-----EVTAMLE-KGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGFAAVELRL 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 2e-32
 Identities = 56/291 (19%), Positives = 106/291 (36%), Gaps = 53/291 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF----FSRDEASWSRETEIYSTVLLRHENIL 193
           +   +GKG++G V+          +A+K+       +         E+     LRH NIL
Sbjct: 10  IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTE 252
              G    +    T+++L+  Y   G++Y  L + +  +  +       + N L + H  
Sbjct: 70  RLYGYFHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH-- 123

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    + HRDIK +N+L+ + G   IADFG +V                 GT  Y+
Sbjct: 124 ------SKRVIHRDIKPENLLLGSAGELKIADFGWSVH------APSSRRTTLCGTLDYL 171

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
            PE+++           +K D+++LG++ +E              K P+        ++ 
Sbjct: 172 PPEMIEGR------MHDEKVDLWSLGVLCYEFLVG----------KPPFE-----ANTYQ 210

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
           +  K I   +     P+             ++      N + R     V +
Sbjct: 211 ETYKRIS--RVEFTFPDFVTEG-----ARDLISRLLKHNPSQRPMLREVLE 254

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 2e-32
 Identities = 65/324 (20%), Positives = 119/324 (36%), Gaps = 75/324 (23%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSR----DEASWSRETEIYSTV 185
            +   + +G G +G+V     +G +       VAVK+   +    +  +   E ++ +  
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ- 96

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-------------------- 225
           L  HENI+  +G+   S      ++L+  Y  +G L ++L                    
Sbjct: 97  LGSHENIVNLLGACTLSGP----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152

Query: 226 ----NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV 281
               +   L    ++     +  G+  L           +  HRD+ ++N+LV       
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLE--------FKSCVHRDLAARNVLVTHGKVVK 204

Query: 282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVL 341
           I DFGLA      SN +           ++M+PE L E I         K+D+++ G++L
Sbjct: 205 ICDFGLARDIMSDSNYV--VRGNARLPVKWMAPESLFEGI------YTIKSDVWSYGILL 256

Query: 342 WEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMT 401
           WE         IF     PY       P   +  K+I  +  +   P     +     + 
Sbjct: 257 WE---------IFSLGVNPYPG----IPVDANFYKLIQ-NGFKMDQPFYATEE-----IY 297

Query: 402 KVMKECWHQNANVRLSALRVKKTL 425
            +M+ CW  ++  R S   +   L
Sbjct: 298 IIMQSCWAFDSRKRPSFPNLTSFL 321

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  123 bits (309), Expect = 4e-32
 Identities = 44/291 (15%), Positives = 103/291 (35%), Gaps = 48/291 (16%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILGYI 196
           + E +G G +G V R      G N A K   +  E+       EI +  +LRH  ++   
Sbjct: 30  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            +          + ++  + S G L++ +      ++  + ++    +  GL H+H    
Sbjct: 90  DAFEDDNE----MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---- 141

Query: 255 GTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
               +    H D+K +NI+   K +    + DFGL        +              + 
Sbjct: 142 ----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA-----EFA 192

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PE+ +              D++++G++ + +              +P+      +   +
Sbjct: 193 APEVAEGK------PVGYYTDMWSVGVLSYILLSG----------LSPFGG----ENDDE 232

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
            +R V   D          +S+   +     +++    + N R++  +  +
Sbjct: 233 TLRNVKSCDWNMDDSAFSGISEDGKD----FIRKLLLADPNTRMTIHQALE 279

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 4e-32
 Identities = 50/292 (17%), Positives = 102/292 (34%), Gaps = 44/292 (15%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
            S+ +G G  G+V +       E  A+K+   +D     RE E++     +  +I+  + 
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKML--QDCPKARREVELHWR-ASQCPHIVRIVD 72

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIF 254
                      L +V      G L+  +           +  +I  SI   + +LH    
Sbjct: 73  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---- 128

Query: 255 GTQGKPAIAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  IAHRD+K +N+L    + N    + DFG A   +  ++           T  Y
Sbjct: 129 ----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYY 179

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           ++PE+L         +  K  D+++LG++++ +               P++    +  S 
Sbjct: 180 VAPEVLGPE------KYDKSCDMWSLGVIMYILLCG----------YPPFYSNHGLAISP 223

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
               ++     + P      VS+        +++         R++      
Sbjct: 224 GMKTRIRMGQYEFPNPEWSEVSEEVKM----LIRNLLKTEPTQRMTITEFMN 271

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 5e-32
 Identities = 64/318 (20%), Positives = 117/318 (36%), Gaps = 69/318 (21%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN----VAVKIF----FSRDEASWSRETEIYSTVLL 187
             I   + IG+G +G+V +     +      A+K         D   ++ E E+    L 
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LG 68

Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-----------------TTL 230
            H NI+  +G+          L+L   Y   G+L D L +                 +TL
Sbjct: 69  HHPNIINLLGACEHRGY----LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 124

Query: 231 NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS 290
           +  Q++     +  G+ +L         +    HRD+ ++NILV  N    IADFGL+  
Sbjct: 125 SSQQLLHFAADVARGMDYLS--------QKQFIHRDLAARNILVGENYVAKIADFGLSRG 176

Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
                 K            R+M+ E L+ S+          +D+++ G++LWE+      
Sbjct: 177 QEVYVKKTMG-----RLPVRWMAIESLNYSVYT------TNSDVWSYGVLLWEIVSL--- 222

Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
                    PY  +       +   K+      R   P     +     +  +M++CW +
Sbjct: 223 ------GGTPYCGMTCA----ELYEKL--PQGYRLEKPLNCDDE-----VYDLMRQCWRE 265

Query: 411 NANVRLSALRVKKTLIKL 428
               R S  ++  +L ++
Sbjct: 266 KPYERPSFAQILVSLNRM 283

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 5e-32
 Identities = 55/309 (17%), Positives = 114/309 (36%), Gaps = 56/309 (18%)

Query: 128 LLIQRTLAKQISLSEC-IGKGRYGEVWRGVWH----GENVAVKIF----FSRDEASWSRE 178
           L ++R     + +++  +G G +G V +GV+       +VA+K+        D     RE
Sbjct: 3   LFLKR---DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 59

Query: 179 TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMM 236
            +I     L +  I+  IG           L LV      G L+  L   R  +    + 
Sbjct: 60  AQIMHQ--LDNPYIVRLIGVC-----QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA 112

Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
           ++   +  G+ +L         +    HRD+ ++N+L+       I+DFGL+ +     +
Sbjct: 113 ELLHQVSMGMKYLE--------EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA-DD 163

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
                 +      ++ +PE ++            ++D+++ G+ +WE             
Sbjct: 164 SYYTARSAGKWPLKWYAPECINFRKFS------SRSDVWSYGVTMWE---------ALSY 208

Query: 357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL 416
            + PY  +       + M  +     +R   P     +     +  +M +CW      R 
Sbjct: 209 GQKPYKKMKGP----EVMAFI--EQGKRMECPPECPPE-----LYALMSDCWIYKWEDRP 257

Query: 417 SALRVKKTL 425
             L V++ +
Sbjct: 258 DFLTVEQRM 266

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  121 bits (304), Expect = 6e-32
 Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 48/303 (15%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRE--TEIYSTVLLR 188
             + + + IG G +GEV  G           VA+K   S       R+  +E        
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85

Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGL 246
           H N++   G    S      + ++T +   GSL  +   N       Q++ +   I  G+
Sbjct: 86  HPNVIHLEGVVTKSTP----VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 141

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI-PPNPR 305
            +L              HRD+ ++NILV +N  C ++DFGL+      ++          
Sbjct: 142 KYLA--------DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 193

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
               R+ +PE +         +    +D+++ G+V+WEV             + PY D+ 
Sbjct: 194 KIPIRWTAPEAIQYR------KFTSASDVWSYGIVMWEVMSYG---------ERPYWDMT 238

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
             D        +  I+Q   + P          A+ ++M +CW ++ N R    ++  TL
Sbjct: 239 NQD-------VINAIEQDYRLPPPMDCPS----ALHQLMLDCWQKDRNHRPKFGQIVNTL 287

Query: 426 IKL 428
            K+
Sbjct: 288 DKM 290

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 9e-32
 Identities = 66/304 (21%), Positives = 114/304 (37%), Gaps = 50/304 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIF----FSRDEASWSRETEIYSTVL 186
           K + L E +G G +G V RG W   +     VAVK       S+ EA      E+ +   
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
           L H N++   G  +T       + +VT     GSL D L  ++       + +  + +  
Sbjct: 68  LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L              HRD+ ++N+L+ T     I DFGL  +  Q ++   +    
Sbjct: 123 GMGYLE--------SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-NDDHYVMQEH 173

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
           R     + +PE L              +D +  G+ LWE         +F   + P+  L
Sbjct: 174 RKVPFAWCAPESLKTRTF------SHASDTWMFGVTLWE---------MFTYGQEPWIGL 218

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
                    +   I  + +R   P     D     +  VM +CW      R + + ++  
Sbjct: 219 NGS-----QILHKIDKEGERLPRPEDCPQD-----IYNVMVQCWAHKPEDRPTFVALRDF 268

Query: 425 LIKL 428
           L++ 
Sbjct: 269 LLEA 272

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-31
 Identities = 61/302 (20%), Positives = 120/302 (39%), Gaps = 33/302 (10%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
             IG+G +GEV++      G+ VA+K     +E      T   EI    LL+HEN++  I
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 197 GSDMTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHT 251
               T  +   +    ++LV  +          N        ++ ++   ++NGL ++H 
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH- 134

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                  +  I HRD+K+ N+L+  +G   +ADFGLA ++S   N        RV T  Y
Sbjct: 135 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 187

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK----------ANGIFEEYKAPY 361
             PE+L    +          D++  G ++ E+  R+              I +   +  
Sbjct: 188 RPPELLLGERDYG-----PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242

Query: 362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV 421
            ++ P   +++   K+  +  Q+  + +R  +         ++ +    +   R+ +   
Sbjct: 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

Query: 422 KK 423
             
Sbjct: 303 LN 304

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 3e-31
 Identities = 63/304 (20%), Positives = 114/304 (37%), Gaps = 53/304 (17%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSRDEASWSRETEIYSTVL 186
            ++  + IG G +GEV++G+    +      VA+K     +  +    +  E  I     
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ-- 65

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
             H NI+   G     +     + ++T Y   G+L   L       +  Q++ +   I  
Sbjct: 66  FSHHNIIRLEGVISKYKP----MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           G+ +L              HRD+ ++NILV +N  C ++DFGL+        +     + 
Sbjct: 122 GMKYLA--------NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSG 172

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
                R+ +PE +              +D+++ G+V+WEV                Y + 
Sbjct: 173 GKIPIRWTAPEAISYRKFT------SASDVWSFGIVMWEVM--------------TYGER 212

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
              + S  ++ K I  D  R   P    S      + ++M +CW Q    R     +   
Sbjct: 213 PYWELSNHEVMKAIN-DGFRLPTPMDCPSA-----IYQLMMQCWQQERARRPKFADIVSI 266

Query: 425 LIKL 428
           L KL
Sbjct: 267 LDKL 270

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  119 bits (299), Expect = 8e-31
 Identities = 54/291 (18%), Positives = 102/291 (35%), Gaps = 52/291 (17%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSRETEIYSTVLLRHENILGYI 196
           E +G G +G V R V    G     K     +  D+ +   E  I +   L H  ++   
Sbjct: 35  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ--LHHPKLINLH 92

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            +          + L+  + S G L+D +      ++  +++        GL H+H    
Sbjct: 93  DAFEDKYE----MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---- 144

Query: 255 GTQGKPAIAHRDIKSKNILV--KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
               + +I H DIK +NI+   K   +  I DFGLA   +      D        T  + 
Sbjct: 145 ----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-----DEIVKVTTATAEFA 195

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           +PEI+D              D++A+G++ + +              +P+     +    +
Sbjct: 196 APEIVDRE------PVGFYTDMWAIGVLGYVLLSG----------LSPFAGEDDL----E 235

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
            ++ V   D +        VS    +     +K    +    RL+     +
Sbjct: 236 TLQNVKRCDWEFDEDAFSSVSPEAKD----FIKNLLQKEPRKRLTVHDALE 282

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  117 bits (294), Expect = 1e-30
 Identities = 58/294 (19%), Positives = 109/294 (37%), Gaps = 41/294 (13%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWS-RETEIYSTVLLRHENILGYI 196
             E +G+G    V R +     +  AVKI       S+S  E +      L+  +IL  +
Sbjct: 7   PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 197 GSDMTSRN------SCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHL 249
                         + T  +LV      G L+D+L  + TL+  +  KI  +++  +  L
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 126

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H        K  I HRD+K +NIL+  +    + DFG +                  GT 
Sbjct: 127 H--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-----GEKLREVCGTP 173

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
            Y++PEI++ S+N +     K+ D+++ G++++ +               P+        
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG----------SPPFWH----RK 219

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
               +R ++  + Q         SD+  +    ++          R +A     
Sbjct: 220 QMLMLRMIMSGNYQFGSPEWDDYSDTVKD----LVSRFLVVQPQKRYTAEEALA 269

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 3e-30
 Identities = 54/286 (18%), Positives = 100/286 (34%), Gaps = 49/286 (17%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
             + +G+G +  V            A+KI   R     ++   +         L H   +
Sbjct: 12  FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTE 252
               +          L+    Y   G L  ++ +  + +          IV+ L +LH  
Sbjct: 72  KLYFTFQDDEK----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 125

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                    I HRD+K +NIL+  +    I DFG A   S  S +     N  VGT +Y+
Sbjct: 126 ------GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA--RANSFVGTAQYV 177

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
           SPE+L E        + K +D++ALG +++++               P+          +
Sbjct: 178 SPELLTEK------SACKSSDLWALGCIIYQLVAG----------LPPFRA-------GN 214

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           +      I +     P ++           ++++    +A  RL  
Sbjct: 215 EYLIFQKIIKLEYDFPEKFFPK-----ARDLVEKLLVLDATKRLGC 255

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (291), Expect = 3e-30
 Identities = 58/300 (19%), Positives = 121/300 (40%), Gaps = 50/300 (16%)

Query: 136 KQISLSECIGKGRYGEVWRGVWH--GENVAVKIFF--SRDEASWSRETEIYSTVLLRHEN 191
             I++   +G G+YGEV+ GVW      VAVK     + +   + +E  +     ++H N
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE--IKHPN 74

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVH 248
           ++  +G            +++T + ++G+L D+L   NR  ++   ++ +   I + + +
Sbjct: 75  LVQLLGVCTREPP----FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           L         K    HRD+ ++N LV  N    +ADFGL+     ++             
Sbjct: 131 LE--------KKNFIHRDLAARNCLVGENHLVKVADFGLS---RLMTGDTYTAHAGAKFP 179

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
            ++ +PE L  +      +   K+D++A G++LWE+                        
Sbjct: 180 IKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATYGM----------------SPY 217

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
           P  D  +    +++   +       +     + ++M+ CW  N + R S   + +    +
Sbjct: 218 PGIDLSQVYELLEKDYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 3e-30
 Identities = 55/319 (17%), Positives = 109/319 (34%), Gaps = 70/319 (21%)

Query: 137 QISLSECIGKGRYGEVWRGVWH-------GENVAVKIF----FSRDEASWSRETEIYSTV 185
           ++S  + +G G +G+V     +          VAVK+        +  +   E ++ S  
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY- 82

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR------------------ 227
           L  H NI+  +G+            ++T Y  +G L + L R                  
Sbjct: 83  LGNHMNIVNLLGACTIGGP----TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 228 -TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG 286
              L+   ++     +  G+  L              HRD+ ++NIL+       I DFG
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLA--------SKNCIHRDLAARNILLTHGRITKICDFG 190

Query: 287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           LA      SN +           ++M+PE +   +         ++D+++ G+ LWE+  
Sbjct: 191 LARDIKNDSNYV--VKGNARLPVKWMAPESIFNCVYT------FESDVWSYGIFLWELFS 242

Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE 406
                                 P      K   + ++   + +    +     M  +MK 
Sbjct: 243 LGS----------------SPYPGMPVDSKFYKMIKEGFRMLS---PEHAPAEMYDIMKT 283

Query: 407 CWHQNANVRLSALRVKKTL 425
           CW  +   R +  ++ + +
Sbjct: 284 CWDADPLKRPTFKQIVQLI 302

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 4e-30
 Identities = 58/287 (20%), Positives = 105/287 (36%), Gaps = 52/287 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF-----FSRDEASWSRETEIYSTVLLRHENI 192
           L + +GKG +G+V+   +    +  A+K          D+   +   +   ++   H  +
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65

Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
                +  T  N    L+ V  Y + G L  H+ +    +  +       I+ GL  LH 
Sbjct: 66  THMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH- 120

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     I +RD+K  NIL+  +G   IADFG+           D   N   GT  Y
Sbjct: 121 -------SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML----GDAKTNTFCGTPDY 169

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
           ++PEIL         +     D ++ G++L+E+             ++P+          
Sbjct: 170 IAPEILLGQ------KYNHSVDWWSFGVLLYEMLIG----------QSPF-------HGQ 206

Query: 372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
           D+      I    P  P RW+     +    ++ + + +    RL  
Sbjct: 207 DEEELFHSIRMDNPFYP-RWLEKEAKD----LLVKLFVREPEKRLGV 248

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 6e-30
 Identities = 60/296 (20%), Positives = 111/296 (37%), Gaps = 29/296 (9%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIG 197
             IG+G YG V     +     VA+K     +  ++ + T  EI   +  RHENI+G   
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
                     +   +  +     LY  L    L++  +      I+ GL ++H       
Sbjct: 74  IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH------- 126

Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
               + HRD+K  N+L+ T     I DFGLA       +         V T+ Y +PEI+
Sbjct: 127 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 184

Query: 318 DESINMDCFESFKKADIYALGLVLWEVC----------RRTKANGIFEEYKAPYHDLVPM 367
                ++     K  DI+++G +L E+              + N I     +P  + +  
Sbjct: 185 -----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 239

Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
             +      ++ +  +  V  NR   ++   A+  ++ +    N + R+   +   
Sbjct: 240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALA 294

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  113 bits (284), Expect = 3e-29
 Identities = 63/328 (19%), Positives = 115/328 (35%), Gaps = 78/328 (23%)

Query: 137 QISLSECIGKGRYGEVWRGVWH-------GENVAVKIF----FSRDEASWSRETEIYSTV 185
            I     IG+G +G V++              VAVK+      +  +A + RE  + +  
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE- 72

Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---------------- 229
              + NI+  +G     +     + L+  Y ++G L + L   +                
Sbjct: 73  -FDNPNIVKLLGVCAVGKP----MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 127

Query: 230 ---------LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTC 280
                    L+  + + I   +  G+ +L         +    HRD+ ++N LV  N   
Sbjct: 128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLS--------ERKFVHRDLATRNCLVGENMVV 179

Query: 281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV 340
            IADFGL+ +    S              R+M PE +             ++D++A G+V
Sbjct: 180 KIADFGLSRNIY--SADYYKADGNDAIPIRWMPPESIFY------NRYTTESDVWAYGVV 231

Query: 341 LWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAM 400
           LWE         IF     PY+ +       + +  V   D      P     +     +
Sbjct: 232 LWE---------IFSYGLQPYYGMAHE----EVIYYV--RDGNILACPENCPLE-----L 271

Query: 401 TKVMKECWHQNANVRLSALRVKKTLIKL 428
             +M+ CW +    R S   + + L ++
Sbjct: 272 YNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (285), Expect = 4e-29
 Identities = 46/290 (15%), Positives = 98/290 (33%), Gaps = 47/290 (16%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           ++E +G+G +G V R V     +    K    +       + EI    + RH NIL    
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
           S  +       L ++  + S   +++ +N     LN  +++     +   L  LH     
Sbjct: 69  SFESMEE----LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH----- 119

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCV--IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                 I H DI+ +NI+ +T  +    I +FG A        K             Y +
Sbjct: 120 ---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-----KPGDNFRLLFTAPEYYA 171

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE+                D+++LG +++ +               P+      + +   
Sbjct: 172 PEVHQHD------VVSTATDMWSLGTLVYVLLSG----------INPFLA----ETNQQI 211

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
           +  ++  +        + +S   ++     +     +    R++A    +
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMD----FVDRLLVKERKSRMTASEALQ 257

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 7e-29
 Identities = 61/311 (19%), Positives = 121/311 (38%), Gaps = 51/311 (16%)

Query: 129 LIQRTLAKQISLSECIGKGRYGEVWRGVWHGEN------VAVKIFFSRDEASWSRE--TE 180
           L++     +    + +G G +G V++G+W  E       VA+K          ++E   E
Sbjct: 2   LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61

Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKI 238
            Y    + + ++   +G  +TS      + L+T    FG L D++     N     ++  
Sbjct: 62  AYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 116

Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
           C+ I  G+ +L            + HRD+ ++N+LVKT     I DFGLA      + + 
Sbjct: 117 CVQIAKGMNYLE--------DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEK 166

Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK 358
           +          ++M+ E +   I         ++D+++ G+ +WE         +     
Sbjct: 167 EYHAEGGKVPIKWMALESILHRIYT------HQSDVWSYGVTVWE---------LMTFGS 211

Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
            PY  +        ++  ++    +R   P     D     +  +M +CW  +A+ R   
Sbjct: 212 KPYDGI-----PASEISSILE-KGERLPQPPICTID-----VYMIMVKCWMIDADSRPKF 260

Query: 419 LRVKKTLIKLA 429
             +     K+A
Sbjct: 261 RELIIEFSKMA 271

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  112 bits (280), Expect = 8e-29
 Identities = 60/304 (19%), Positives = 115/304 (37%), Gaps = 41/304 (13%)

Query: 133 TLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSR-ETEIYSTVL 186
            L+ +  L E +G G   EV          +VAVK+     +RD + + R   E  +   
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNG 245
           L H  I+    +      +    ++V  Y    +L D ++    +   + +++       
Sbjct: 64  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 123

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           L   H        +  I HRD+K  NI++       + DFG+A + +  S          
Sbjct: 124 LNFSH--------QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-SGNSVTQTAAV 174

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
           +GT +Y+SPE               ++D+Y+LG VL+EV             + P+    
Sbjct: 175 IGTAQYLSPEQARGD------SVDARSDVYSLGCVLYEVLTG----------EPPFTGDS 218

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVKKT 424
           P+        + +  D   P   +  +S      +  V+ +   +N   R  +A  ++  
Sbjct: 219 PV----SVAYQHVREDPIPPSARHEGLSAD----LDAVVLKALAKNPENRYQTAAEMRAD 270

Query: 425 LIKL 428
           L+++
Sbjct: 271 LVRV 274

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 54/301 (17%), Positives = 114/301 (37%), Gaps = 51/301 (16%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRE--TEIYSTVLLRH 189
           +I L  CIG+G++G+V +G++         VA+K   +    S   +   E  +     H
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLV 247
            +I+  IG       +   +W++    + G L   L     +L+   ++     +   L 
Sbjct: 68  PHIVKLIGVI-----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122

Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
           +L              HRDI ++N+LV +N    + DFGL+     + +      +    
Sbjct: 123 YLE--------SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKL 171

Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
             ++M+PE ++             +D++  G+ +WE+               P+  +   
Sbjct: 172 PIKWMAPESINFR------RFTSASDVWMFGVCMWEILMH---------GVKPFQGVKNN 216

Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK 427
           D     + ++   + +R  +P           +  +M +CW  + + R     +K  L  
Sbjct: 217 DV----IGRI--ENGERLPMPPNCPPT-----LYSLMTKCWAYDPSRRPRFTELKAQLST 265

Query: 428 L 428
           +
Sbjct: 266 I 266

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  110 bits (275), Expect = 7e-28
 Identities = 49/294 (16%), Positives = 107/294 (36%), Gaps = 53/294 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF----FSRDEASWSRETEIYSTVLLRHENIL 193
             + +G G + EV         + VA+K          E S   E  +     ++H NI+
Sbjct: 13  FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK--IKHPNIV 70

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
                  +  +    L+L+    S G L+D +  +         ++   +++ + +LH  
Sbjct: 71  ALDDIYESGGH----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH-- 124

Query: 253 IFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
                    I HRD+K +N+L  +   +   +I+DFGL+      S           GT 
Sbjct: 125 ------DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-----CGTP 173

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
            Y++PE+L +          K  D +++G++ + +               P++D      
Sbjct: 174 GYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCG----------YPPFYDENDAKL 217

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
                 +++  + +        +SDS  +     ++    ++   R +  +  +
Sbjct: 218 ----FEQILKAEYEFDSPYWDDISDSAKD----FIRHLMEKDPEKRFTCEQALQ 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  109 bits (274), Expect = 3e-27
 Identities = 65/299 (21%), Positives = 113/299 (37%), Gaps = 52/299 (17%)

Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIF------FSRDEASWSRETEIYSTV-LLRH 189
           S+   IG+G +GEV+       G+  A+K          + E     E  + S V     
Sbjct: 7   SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 66

Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-HQMMKICLSIVNGLVH 248
             I+    +  T       L  +    + G L+ HL++  +     M      I+ GL H
Sbjct: 67  PFIVCMSYAFHTPDK----LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122

Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
           +H           + +RD+K  NIL+  +G   I+D GLA  +S         P+  VGT
Sbjct: 123 MH--------NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS------KKKPHASVGT 168

Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
             YM+PE+L + +  D       AD ++LG +L+++ R            +P+       
Sbjct: 169 HGYMAPEVLQKGVAYD-----SSADWFSLGCMLFKLLRG----------HSPFR-----Q 208

Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK 427
               D  ++  +     V      S      +  +++    ++ N RL  L      +K
Sbjct: 209 HKTKDKHEIDRMTLTMAVELPDSFSPE----LRSLLEGLLQRDVNRRLGCLGRGAQEVK 263

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 7e-27
 Identities = 62/297 (20%), Positives = 120/297 (40%), Gaps = 36/297 (12%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIF------FSRDEASWSRETEIYSTVLLRHENIL 193
           + +G+G++  V++       + VA+K         ++D  + +   EI     L H NI+
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
           G + +     N    + LV  +           N   L    +    L  + GL +LH  
Sbjct: 64  GLLDAFGHKSN----ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH-- 117

Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
                 +  I HRD+K  N+L+  NG   +ADFGLA S+   +         +V T+ Y 
Sbjct: 118 ------QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY----THQVVTRWYR 167

Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT---KANGIFEEYKAPYHDL-VPMD 368
           +PE+L  +            D++A+G +L E+  R      +   ++    +  L  P +
Sbjct: 168 APELLFGARMYG-----VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222

Query: 369 PSFDDMRKVICID--QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
             + DM  +      +  P +P   +  +  + +  +++  +  N   R++A +  K
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 3e-26
 Identities = 62/322 (19%), Positives = 130/322 (40%), Gaps = 71/322 (22%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN---------VAVKIF----FSRDEASWSRETEIYS 183
           ++ L + +G+G +G+V      G +         VAVK+       +D +    E E+  
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 184 TVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------------N 226
             + +H+NI+  +G+          L+++  Y S G+L ++L                  
Sbjct: 74  M-IGKHKNIINLLGACTQDGP----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 227 RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG 286
              L+   ++     +  G+ +L              HRD+ ++N+LV  +    IADFG
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLA--------SKKCIHRDLAARNVLVTEDNVMKIADFG 180

Query: 287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
           LA                     ++M+PE L + I         ++D+++ G++LWE   
Sbjct: 181 LARDIH--HIDYYKKTTNGRLPVKWMAPEALFDRIYT------HQSDVWSFGVLLWE--- 229

Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE 406
                 IF    +PY  +       +++ K++  +  R   P+   ++     +  +M++
Sbjct: 230 ------IFTLGGSPYPGV-----PVEELFKLLK-EGHRMDKPSNCTNE-----LYMMMRD 272

Query: 407 CWHQNANVRLSALRVKKTLIKL 428
           CWH   + R +  ++ + L ++
Sbjct: 273 CWHAVPSQRPTFKQLVEDLDRI 294

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 5e-26
 Identities = 57/312 (18%), Positives = 116/312 (37%), Gaps = 64/312 (20%)

Query: 136 KQISLSECIGKGRYGEVWRGVWH-------GENVAVKIF----FSRDEASWSRETEIYST 184
           ++I++S  +G+G +G V+ GV            VA+K        R+   +  E  +   
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
                 +++  +G     +       ++    + G L  +L                +  
Sbjct: 80  --FNCHHVVRLLGVVSQGQP----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 133

Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
           +M+++   I +G+ +L+             HRD+ ++N +V  + T  I DFG+     +
Sbjct: 134 KMIQMAGEIADGMAYLN--------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 185

Query: 294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGI 353
                       +   R+MSPE L + +          +D+++ G+VLWE         I
Sbjct: 186 TDYYR--KGGKGLLPVRWMSPESLKDGVFT------TYSDVWSFGVVLWE---------I 228

Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
               + PY  L         +R V  ++      P+          + ++M+ CW  N  
Sbjct: 229 ATLAEQPYQGLSNEQV----LRFV--MEGGLLDKPDNCPDM-----LFELMRMCWQYNPK 277

Query: 414 VRLSALRVKKTL 425
           +R S L +  ++
Sbjct: 278 MRPSFLEIISSI 289

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 4e-25
 Identities = 49/304 (16%), Positives = 93/304 (30%), Gaps = 65/304 (21%)

Query: 134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---------FSRDEASWSRETEIY 182
           L  Q  +   +G G +G V+ G+       VA+K              +      E  + 
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
             V      ++  +       +      L+                R  L          
Sbjct: 62  KKVSSGFSGVIRLLDWFERPDS----FVLILERPEPVQDLFDFITERGALQEELARSFFW 117

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGLAVSYSQLSNKMD 299
            ++  + H H           + HRDIK +NIL+  N G   + DFG            D
Sbjct: 118 QVLEAVRHCH--------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK------D 163

Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
                  GT+ Y  PE +            + A +++LG++L++                
Sbjct: 164 TVYTDFDGTRVYSPPEWIRYHRYHG-----RSAAVWSLGILLYD---------------- 202

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
               +V  D  F+   ++I    +  V   + VS    +    +++ C     + R +  
Sbjct: 203 ----MVCGDIPFEHDEEII----RGQVFFRQRVSSECQH----LIRWCLALRPSDRPTFE 250

Query: 420 RVKK 423
            ++ 
Sbjct: 251 EIQN 254

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  101 bits (253), Expect = 1e-24
 Identities = 57/304 (18%), Positives = 104/304 (34%), Gaps = 44/304 (14%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
           L   +G+G+Y EV+  +     E V VKI     +    RE +I    L    NI+    
Sbjct: 39  LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILEN-LRGGPNIITLAD 97

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
                 +      LV  + +            L  + +      I+  L + H       
Sbjct: 98  IVKDPVSRT--PALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCH------- 146

Query: 258 GKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
               I HRD+K  N+++   +    + D+GLA  Y           N RV ++ +  PE+
Sbjct: 147 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP-----GQEYNVRVASRYFKGPEL 200

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVC-----------------RRTKANGIFEEYKA 359
           L +    D        D+++LG +L  +                  R  K  G  + Y  
Sbjct: 201 LVDYQMYD-----YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
                + +DP F+D+       +    + +      +  A+   + +    +   RL+A 
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEAL-DFLDKLLRYDHQSRLTAR 314

Query: 420 RVKK 423
              +
Sbjct: 315 EAME 318

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 50/307 (16%), Positives = 106/307 (34%), Gaps = 55/307 (17%)

Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET-------EI 181
           Q  +       E +G G++  V +      G   A K    R   S  R         E+
Sbjct: 5   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64

Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICL 240
                ++H N++          +    + L+    + G L+D    + +L   +  +   
Sbjct: 65  SILKEIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKESLTEEEATEFLK 120

Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT----CVIADFGLAVSYSQLSN 296
            I+NG+ +LH           IAH D+K +NI++           I DFGLA      + 
Sbjct: 121 QILNGVYYLH--------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 171

Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEE 356
                     GT  +++PEI++            +AD++++G++ + +            
Sbjct: 172 ----EFKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG--------- 212

Query: 357 YKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL 416
             +P+      D   + +  V  ++ +         S    +     ++    ++   R+
Sbjct: 213 -ASPFLG----DTKQETLANVSAVNYEFEDEYFSNTSALAKD----FIRRLLVKDPKKRM 263

Query: 417 SALRVKK 423
           +     +
Sbjct: 264 TIQDSLQ 270

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 52/303 (17%), Positives = 92/303 (30%), Gaps = 47/303 (15%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSR-DEASWSRETEIYSTVL-LRHENILGY 195
           +   IG+G +G ++ G      + VA+K    R D      E   Y  +        + Y
Sbjct: 9   VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYY 68

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
            G +           LV             L     +   +      ++  +  +H    
Sbjct: 69  FGQE------GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---- 118

Query: 255 GTQGKPAIAHRDIKSKNILV-----KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---V 306
               + ++ +RDIK  N L+     K      + DFG+   Y     K  IP   +    
Sbjct: 119 ----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS 174

Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
           GT RYMS             E  ++ D+ ALG V     R +                  
Sbjct: 175 GTARYMSINTHLGR------EQSRRDDLEALGHVFMYFLRGSLPW--------------Q 214

Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI 426
              +  + +K   I +++   P R +         K M    +   +       ++    
Sbjct: 215 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

Query: 427 KLA 429
           K+ 
Sbjct: 275 KVL 277

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.8 bits (245), Expect = 7e-24
 Identities = 65/299 (21%), Positives = 104/299 (34%), Gaps = 35/299 (11%)

Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENIL 193
              E IG+G YG V++      GE VA+K      E      T   EI     L H NI+
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64

Query: 194 GYIGSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
             +    T      +L+LV  +         D    T +    +      ++ GL   H 
Sbjct: 65  KLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 119

Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
                     + HRD+K +N+L+ T G   +ADFGLA ++              V T  Y
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWY 168

Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR-------TKANGIFEEYKAPYHDL 364
            +PEIL               DI++LG +  E+  R       ++ + +F  ++      
Sbjct: 169 RAPEILLGCKYYS-----TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223

Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
             + P    M        +        V          ++ +  H + N R+SA     
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 1e-23
 Identities = 61/321 (19%), Positives = 105/321 (32%), Gaps = 43/321 (13%)

Query: 119 TSGSGSGLPLLIQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWS 176
           T G G   P  +  T  K I      G G +G V++      GE VA+K    +D+   +
Sbjct: 9   TPGQGPDRPQEVSYTDTKVI------GNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKN 61

Query: 177 RETEIYSTVLLRHENILGYIGSDMTS--RNSCTQLWLVTHYHSFGSLYDHLN----RTTL 230
           RE +I     L H NI+       +S  +     L LV  Y          +    + TL
Sbjct: 62  RELQIMRK--LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119

Query: 231 NHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAV 289
               +      +   L ++H           I HRDIK +N+L+  +     + DFG A 
Sbjct: 120 PVIYVKLYMYQLFRSLAYIH--------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC---- 345
              +       P    + ++ Y +PE++  + +          D+++ G VL E+     
Sbjct: 172 QLVR-----GEPNVSYICSRYYRAPELIFGATDYT-----SSIDVWSAGCVLAELLLGQP 221

Query: 346 ---RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK 402
                +  + + E  K             +         Q +     +     T      
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA 281

Query: 403 VMKECWHQNANVRLSALRVKK 423
           +           RL+ L    
Sbjct: 282 LCSRLLEYTPTARLTPLEACA 302

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 1e-23
 Identities = 65/304 (21%), Positives = 111/304 (36%), Gaps = 46/304 (15%)

Query: 142 ECIGKGRYGEVWRGVWH---GENVAVKIF-----FSRDEASWSRETEIYSTV-LLRHENI 192
             IG+G YG+V++       G  VA+K             S  RE  +   +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 193 LGYIGSDMTSR-NSCTQLWLVTHYHSFG--SLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
           +        SR +  T+L LV  +      +  D +    +    +  +   ++ GL  L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
           H+          + HRD+K +NILV ++G   +ADFGLA  YS       +     V T 
Sbjct: 133 HSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVTL 179

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRRTKANG---------IFEEYKA 359
            Y +PE+L +S            D++++G +  E   R+    G         I +    
Sbjct: 180 WYRAPEVLLQSSYA------TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 233

Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
           P  +  P D +           Q         + +   +    ++ +C   N   R+SA 
Sbjct: 234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTD-IDELGKD----LLLKCLTFNPAKRISAY 288

Query: 420 RVKK 423
               
Sbjct: 289 SALS 292

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 2e-23
 Identities = 57/319 (17%), Positives = 115/319 (36%), Gaps = 65/319 (20%)

Query: 137 QISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSRETEIYSTVLLR- 188
           ++ L + +G+G +G+V      G +       VAVK+       S  R       +L+  
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 189 --HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-----------------RTT 229
             H N++  +G+          L ++  +  FG+L  +L                  +  
Sbjct: 74  GHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
           L    ++     +  G+  L              HRD+ ++NIL+       I DFGLA 
Sbjct: 131 LTLEHLICYSFQVAKGMEFLA--------SRKCIHRDLAARNILLSEKNVVKICDFGLAR 182

Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
              +  + +           ++M+PE + + +         ++D+++ G++LWE+     
Sbjct: 183 DIYKDPDYVRK--GDARLPLKWMAPETIFDRVYT------IQSDVWSFGVLLWEIFSL-- 232

Query: 350 ANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWH 409
                    +PY  +       D+       +  R   P+    +     M + M +CWH
Sbjct: 233 -------GASPYPGV-----KIDEEFCRRLKEGTRMRAPDYTTPE-----MYQTMLDCWH 275

Query: 410 QNANVRLSALRVKKTLIKL 428
              + R +   + + L  L
Sbjct: 276 GEPSQRPTFSELVEHLGNL 294

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 97.3 bits (241), Expect = 2e-23
 Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 33/294 (11%)

Query: 142 ECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG 197
           E IG+G YG V++   + GE  A+K      E      T   EI     L+H NI+    
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
              T +     L LV  +               L         L ++NG+ + H      
Sbjct: 68  VIHTKKR----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH------ 117

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                + HRD+K +N+L+   G   IADFGLA ++     K        + T  Y +P++
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEIVTLWYRAPDV 171

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCR-------RTKANGIFEEYKAPYHDLVPMDP 369
           L  S            DI+++G +  E+          ++A+ +   ++          P
Sbjct: 172 LMGSKKYS-----TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK 423
           +  ++ K          LP          +   ++ +    + N R++A +  +
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 2e-23
 Identities = 56/286 (19%), Positives = 104/286 (36%), Gaps = 51/286 (17%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENILGY 195
           + +GKG +G+V        G   A+KI       +        TE       RH  +   
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
             +  T       L  V  Y + G L+ HL+R       +       IV+ L +LH    
Sbjct: 71  KYAFQTHDR----LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---- 122

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + +RDIK +N+++  +G   I DFGL          M        GT  Y++P
Sbjct: 123 ----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEYLAP 174

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           E+L+++      +  +  D + LG+V++E+             + P+++         D 
Sbjct: 175 EVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYN--------QDH 210

Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
            ++  +     +   R +S    +    ++     ++   RL    
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKS----LLAGLLKKDPKQRLGGGP 252

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.2 bits (241), Expect = 2e-23
 Identities = 48/296 (16%), Positives = 94/296 (31%), Gaps = 43/296 (14%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSR-DEASWSRETEIYSTVLLRHENILGYI 196
           L   IG G +G+++ G     GE VA+K+   +        E++IY   +++    +  I
Sbjct: 11  LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYK--MMQGGVGIPTI 68

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFG 255
                  +      +V               +   +   ++ +   +++ + ++H     
Sbjct: 69  RWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH----- 120

Query: 256 TQGKPAIAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTK 309
                   HRD+K  N L+   K      I DFGLA  Y        IP        GT 
Sbjct: 121 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 177

Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
           RY S             E  ++ D+ +LG VL      +                     
Sbjct: 178 RYASINTHLGI------EQSRRDDLESLGYVLMYFNLGSLPW--------------QGLK 217

Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL 425
           +    +K   I +++   P   +     +     +  C     + +     +++  
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 273

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 4e-23
 Identities = 53/295 (17%), Positives = 101/295 (34%), Gaps = 33/295 (11%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
           E IG+G YG V++       E VA+K     D+      +   EI     L+H+NI+   
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
               + +                  Y       L+   +      ++ GL   H      
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKK---YFDSCNGDLDPEIVKSFLFQLLKGLGFCH------ 118

Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
                + HRD+K +N+L+  NG   +A+FGLA ++           +  V T  Y  P++
Sbjct: 119 --SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY----SAEVVTLWYRPPDV 172

Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTK----ANGIFEEYKAPYHDLVPMDPSFD 372
           L  +            D+++ G +  E+    +     N + ++ K  +  L        
Sbjct: 173 LFGAKLYS-----TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227

Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKE----CWHQNANVRLSALRVKK 423
                +   +  P+ P      + +  +    ++        N   R+SA    +
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 96.7 bits (240), Expect = 5e-23
 Identities = 47/287 (16%), Positives = 98/287 (34%), Gaps = 52/287 (18%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIF----FSRDEASWSRETEIYSTVLLRHENIL 193
           +   +G G +G V        G   A+K+       R +       E     ++ H  I+
Sbjct: 8   ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
              G+   ++     +  +     F             +         +   L +LH   
Sbjct: 68  RMWGTFQDAQQIFMIMDYIEGGELF---SLLRKSQRFPNPVAKFYAAEVCLALEYLH--- 121

Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
                   I +RD+K +NIL+  NG   I DFG A     ++  +        GT  Y++
Sbjct: 122 -----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-------CGTPDYIA 169

Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
           PE++            K  D ++ G++++E+               P++D   M      
Sbjct: 170 PEVVSTK------PYNKSIDWWSFGILIYEMLAG----------YTPFYDSNTM----KT 209

Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
             K++  + + P     + ++   +    ++     ++ + RL  L+
Sbjct: 210 YEKILNAELRFP----PFFNEDVKD----LLSRLITRDLSQRLGNLQ 248

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.9 bits (235), Expect = 4e-22
 Identities = 48/286 (16%), Positives = 96/286 (33%), Gaps = 54/286 (18%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENILGY 195
           + +G G +G V        G + A+KI   +      +      E      +    ++  
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
             S        + L++V  Y + G ++ HL R    +          IV    +LH    
Sbjct: 107 EFSFKD----NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---- 158

Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
                  + +RD+K +N+L+   G   + DFG A      +  +   P         ++P
Sbjct: 159 ----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP-------EALAP 207

Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
           EI+            K  D +ALG++++E+               P+            +
Sbjct: 208 EIILSK------GYNKAVDWWALGVLIYEMAAG----------YPPFFAD-------QPI 244

Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
           +    I   +   P+ + SD     +  +++     +   R   L+
Sbjct: 245 QIYEKIVSGKVRFPSHFSSD-----LKDLLRNLLQVDLTKRFGNLK 285

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 7e-22
 Identities = 55/293 (18%), Positives = 111/293 (37%), Gaps = 37/293 (12%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
             +G G YG V        G  VAVK      ++    +    E+     ++HEN++G +
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFG 255
                +R+      +    H  G+  +++ +   L    +  +   I+ GL ++H     
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH----- 138

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA          D      V T+ Y +PE
Sbjct: 139 ---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 188

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR----------TKANGIFEEYKAPYHDLV 365
           I+   ++ +     +  DI+++G ++ E+              +   I      P  +L+
Sbjct: 189 IMLNWMHYN-----QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
               S      +  + Q   +        +   A+  ++++    +++ R++A
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAV-DLLEKMLVLDSDKRITA 295

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.1 bits (225), Expect = 6e-21
 Identities = 60/290 (20%), Positives = 113/290 (38%), Gaps = 47/290 (16%)

Query: 142 ECIGKGRYGEVWRGV-----WHGENVAVKIFFSRDEASWSRET-----EIYSTVLLRHEN 191
           + +G G YG+V+          G+  A+K+         ++ T     E      +R   
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
            L  +     +     +L L+  Y + G L+ HL  R     H++      IV  L HLH
Sbjct: 90  FLVTLHYAFQTET---KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 146

Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
                   K  I +RDIK +NIL+ +NG  V+ DFGL+  +     +         GT  
Sbjct: 147 --------KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC---GTIE 195

Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS 370
           YM+P+I+    +       K  D ++LG++++E+              +P+      +  
Sbjct: 196 YMAPDIVRGGDSGHD----KAVDWWSLGVLMYELLTG----------ASPFTVDGEKNSQ 241

Query: 371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALR 420
            +  R+++  +   P    + +S    +    +++    ++   RL    
Sbjct: 242 AEISRRILKSEPPYP----QEMSALAKD----LIQRLLMKDPKKRLGCGP 283

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 9e-21
 Identities = 52/293 (17%), Positives = 106/293 (36%), Gaps = 37/293 (12%)

Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYI 196
           + +G G YG V   V    G  VA+K  +   ++    +    E+     +RHEN++G +
Sbjct: 24  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 83

Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
                                 G+    L     L   ++  +   ++ GL ++H     
Sbjct: 84  DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH----- 138

Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
                 I HRD+K  N+ V  +    I DFGLA                 V T+ Y +PE
Sbjct: 139 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGY-------VVTRWYRAPE 188

Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTK----------ANGIFEEYKAPYHDLV 365
           ++   +        +  DI+++G ++ E+                  I +    P  + V
Sbjct: 189 VILNWMRYT-----QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 243

Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
               S +    +  + +         +++++  A+  ++++    +A  R++A
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAV-NLLEKMLVLDAEQRVTA 295

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 2e-18
 Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 28/223 (12%)

Query: 133 TLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIF---FSRDEASWSRETEIYSTVLL 187
           T+ K+    + IG G  G V          NVA+K     F     +     E+     +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 188 RHENILGYIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNG 245
            H+NI+  +       +      ++LV                   H +M  +   ++ G
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--HERMSYLLYQMLCG 131

Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
           + HLH           I HRD+K  NI+VK++ T  I DFGLA +             P 
Sbjct: 132 IKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPY 178

Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
           V T+ Y +PE       +      +  DI+++G ++ E+ R  
Sbjct: 179 VVTRYYRAPE------VILGMGYKENVDIWSVGCIMGEMVRHK 215

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.2 bits (186), Expect = 8e-16
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 29/219 (13%)

Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENI----- 192
           L   +G G +  VW         +VA+KI       + + E EI     +   +      
Sbjct: 17  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 76

Query: 193 --------LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
                   L    +          +       +  +L        +    + +I   ++ 
Sbjct: 77  MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136

Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
           GL ++H        +  I H DIK +N+L++   +       + ++    +   D     
Sbjct: 137 GLDYMHR-------RCGIIHTDIKPENVLMEIVDSPEN-LIQIKIADLGNACWYDEHYTN 188

Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
            + T+ Y SPE+L  +           ADI++   +++E
Sbjct: 189 SIQTREYRSPEVLLGA------PWGCGADIWSTACLIFE 221

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.0 bits (160), Expect = 3e-13
 Identities = 21/166 (12%), Positives = 43/166 (25%), Gaps = 27/166 (16%)

Query: 139 SLSECIGKGRYGEVWRGVWH-GENVAVKIF-----------FSRDEASWSRETEIYSTVL 186
           ++ + +G+G+   V+           VK               RD            +  
Sbjct: 3   AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
                +    G  +    +     ++        LY              ++   I+  +
Sbjct: 63  NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV------RVENPDEVLDMILEEV 116

Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
              +           I H D+   N+LV +     I DF  +V   
Sbjct: 117 AKFY--------HRGIVHGDLSQYNVLV-SEEGIWIIDFPQSVEVG 153

>d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: BMP receptor Ia ectodomain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 4  CHSVNV--GQFTIQCCDGDFCNNGSFPILPP 32
          C        + TI+CC  + CN    P LPP
Sbjct: 54 CKDSPKAQLRRTIECCRTNLCNQYLQPTLPP 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	443
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.91
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.25
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.05
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.25
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.35
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.29
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.79
d2h62c1	84	BMP receptor Ia ectodomain {Human (Homo sapiens) [	86.5
d1btea_	96	Type II activin receptor {Mouse (Mus musculus) [Ta	84.92

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-60  Score=448.96  Aligned_cols=298  Identities=62%  Similarity=1.061  Sum_probs=254.4

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      .++|.+.+.||+|+||.||+|+++|+.||||++..+......+|.|+..+..++|||||+++|++.+.......+++|||
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~E   81 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEe
Confidence            36788999999999999999999999999999977766667778888887779999999999999887665567899999


Q ss_pred             ccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccccc
Q psy14889        215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQL  294 (443)
Q Consensus       215 ~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~  294 (443)
                      |+++|+|.+++++..+++.+++.++.|+|.||+|||+...+..+.++|+||||||+||||+.++.+||+|||+++.....
T Consensus        82 y~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_          82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             cccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCC
Confidence            99999999999998999999999999999999999986544445679999999999999999999999999999877654


Q ss_pred             CCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHH
Q psy14889        295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM  374 (443)
Q Consensus       295 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~  374 (443)
                      ............||+.|+|||++.+........++.++|||||||+||||+||..+++..+....|+.............
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T d1vjya_         162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM  241 (303)
T ss_dssp             TTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred             CcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHH
Confidence            44333334556899999999998765332222356799999999999999999988887777788888887777788888


Q ss_pred             HhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      .........+|.++..+...+.+..+.+|+.+||+.||++|||+.||++.|+++.++.
T Consensus       242 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence            8888777788888877777778888999999999999999999999999999998654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-56  Score=419.97  Aligned_cols=264  Identities=30%  Similarity=0.450  Sum_probs=206.3

Q ss_pred             hccccccceeeeecCeEEEEEEECCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||+||+|++++ .||||++.....   .......|+..+..++|||||+++|++..+     .+++
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~-----~~~l   80 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-----QLAI   80 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----SCEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc-----EEEE
Confidence            4789999999999999999998765 599999864322   122334677777779999999999987543     3689


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ||||+++|+|.+++..  ..+++.+++.++.|||+||+|||++        +||||||||+|||++.++.+||+|||+|+
T Consensus        81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~--------~ivHrDlKp~NiLl~~~~~~Kl~DFGla~  152 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK--------SIIHRDLKSNNIFLHEDLTVKIGDFGLAT  152 (276)
T ss_dssp             EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEETTSSEEECCCCCSC
T ss_pred             EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC--------CEeccccCHHHEEEcCCCCEEEcccccee
Confidence            9999999999999953  5699999999999999999999998        99999999999999999999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .........  ......||+.|||||++.+....   .++.++|||||||++|||+||          +.||.+..    
T Consensus       153 ~~~~~~~~~--~~~~~~gt~~y~APE~l~~~~~~---~~~~~sDiwS~Gv~l~el~tg----------~~Pf~~~~----  213 (276)
T d1uwha_         153 VKSRWSGSH--QFEQLSGSILWMAPEVIRMQDKN---PYSFQSDVYAFGIVLYELMTG----------QLPYSNIN----  213 (276)
T ss_dssp             C--------------CCCCGGGCCHHHHTTCSSC---CCCHHHHHHHHHHHHHHHHHS----------SCTTTTCC----
T ss_pred             eccccCCcc--cccccccCcccCCHHHHhcccCC---CCCchhhhhhhHHHHHHHHHC----------CCCCCCCC----
Confidence            765432221  22445799999999999754221   567899999999999999999          77887642    


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                      ....+...+......+..+.  ....+++++.+||.+||+.||++|||+.||++.|+.+.++.+
T Consensus       214 ~~~~~~~~~~~~~~~p~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         214 NRDQIIFMVGRGYLSPDLSK--VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             CHHHHHHHHHHTSCCCCGGG--SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHhcCCCCCcchh--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence            23344444443333333221  124577889999999999999999999999999999987654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-56  Score=413.80  Aligned_cols=255  Identities=23%  Similarity=0.410  Sum_probs=199.5

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||+||+|.+ +++.||||++............|+..+..++|||||+++|++....    .+++|||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~----~~~lv~E   80 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFE   80 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCC----ceEEEEE
Confidence            6799999999999999999998 5778999998765544445566777777799999999999998764    3699999


Q ss_pred             ccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++..  ..+++..++.++.|||.||+|||+.        +|+||||||+|||+++++.+||+|||+|+...
T Consensus        81 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~--------~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  152 (263)
T d1sm2a_          81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA--------CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  152 (263)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCTTCSGGGEEECGGGCEEECSCC------
T ss_pred             ecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc--------ceeecccchhheeecCCCCeEecccchheecc
Confidence            9999999999854  5689999999999999999999998        99999999999999999999999999998765


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ......   .....||+.|+|||++.+.      .++.++|||||||++|||+|++         ..||...     ...
T Consensus       153 ~~~~~~---~~~~~gt~~y~aPE~l~~~------~~~~k~DVwS~Gvil~el~t~~---------~~~~~~~-----~~~  209 (263)
T d1sm2a_         153 DDQYTS---STGTKFPVKWASPEVFSFS------RYSSKSDVWSFGVLMWEVFSEG---------KIPYENR-----SNS  209 (263)
T ss_dssp             ---------------CTTSCCHHHHTTC------CCCHHHHHHHHHHHHHHHHTTS---------CCTTCSC-----CHH
T ss_pred             CCCcee---ecceecCcccCChHHhcCC------CCCchhhhcchHHHHHHHHHCC---------CCCCCCC-----CHH
Confidence            432221   2335789999999999876      7789999999999999999962         3334332     333


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ++...+.. ..++..|     ..+++++.+|+.+||+.||++|||++||++.|+++.++
T Consensus       210 ~~~~~i~~-~~~~~~p-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         210 EVVEDIST-GFRLYKP-----RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHHHHH-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh-cCCCCCc-----cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            44444332 2333333     34667899999999999999999999999999999764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-55  Score=408.60  Aligned_cols=255  Identities=23%  Similarity=0.369  Sum_probs=205.8

Q ss_pred             hccccccceeeeecCeEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||.||+|.++ ++.||||++............|+..+..++|||||+++|++.+.     .+++||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-----~~~iv~   86 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT   86 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccC-----CeEEEE
Confidence            478999999999999999999995 67899999876554444455666667779999999999987553     258999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++|+|.+++..   ..+++..++.++.||++||.|||++        +|+||||||+||||++++.+||+|||+|+.
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~--------~ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--------NYIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCccchhheeeecccceeeccccceEE
Confidence            99999999998854   3699999999999999999999998        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      +.......   .....||+.|||||++.++      .++.++|||||||++|||+||          ..|+...    ..
T Consensus       159 ~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~~~~sDvwS~Gvvl~ellt~----------~~~~~~~----~~  215 (272)
T d1qpca_         159 IEDNEYTA---REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTH----------GRIPYPG----MT  215 (272)
T ss_dssp             CSSSCEEC---CTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTT----------TCCSSTT----CC
T ss_pred             ccCCcccc---ccccCCcccccChHHHhCC------CCCchhhhhhhHHHHHHHHhC----------CCCCCCC----CC
Confidence            75432221   2345789999999999876      667899999999999999997          3333322    12


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ..++...+. ...++..|     ..+++++.+|+.+||+.||++|||+++|++.|+++-.+
T Consensus       216 ~~~~~~~i~-~~~~~~~p-----~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         216 NPEVIQNLE-RGYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-hcCCCCCc-----ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            333333332 23344444     34677899999999999999999999999999987543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-55  Score=415.18  Aligned_cols=262  Identities=24%  Similarity=0.378  Sum_probs=199.0

Q ss_pred             ccccccceeeeecCeEEEEEEEC--Cc---eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH--GE---NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~--~~---~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||+||+|.+.  ++   .||||.+......  ......|+..+..++|||||+++|++.+..    .
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~  101 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST----P  101 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----S
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----E
Confidence            67899999999999999999983  32   5888887553322  223456777777799999999999997764    4


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++|||||++|+|.+++..  ..+++.+++.++.|||+||.|||++        +|+||||||+||||+.++++||+|||
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--------~iiHrDlKp~NILl~~~~~~Kl~DFG  173 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM--------NYVHRDLAARNILVNSNLVCKVSDFG  173 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred             EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC--------CCccCccccceEEECCCCcEEECCcc
Confidence            7999999999999998865  4699999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCC-CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        287 LAVSYSQLSNKMD-IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       287 la~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      +|+.+........ .......||+.|||||.+.+.      .++.++|||||||++|||+| |          ..||.+.
T Consensus       174 la~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~el~t~g----------~~Pf~~~  237 (299)
T d1jpaa_         174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR------KFTSASDVWSYGIVMWEVMSYG----------ERPYWDM  237 (299)
T ss_dssp             ----------------------CGGGSCHHHHHSC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTC
T ss_pred             cceEccCCCCcceeeecccccCCccccCHHHHhcC------CCCcccccccchHHHHHHHhCC----------CCCCCCC
Confidence            9987765433221 112234688999999999876      77789999999999999998 6          6787764


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                           ...++...+.. ..++..+     ..+++++.+|+.+||+.||++|||+.||++.|+++.+....++
T Consensus       238 -----~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~slk  298 (299)
T d1jpaa_         238 -----TNQDVINAIEQ-DYRLPPP-----MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK  298 (299)
T ss_dssp             -----CHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGT
T ss_pred             -----CHHHHHHHHHc-CCCCCCC-----ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcChhhCC
Confidence                 33444444432 2333333     3467889999999999999999999999999999988765543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-54  Score=410.89  Aligned_cols=247  Identities=26%  Similarity=0.430  Sum_probs=203.4

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||+||+|..  +|+.||||++...... ......|+..+..++|||||++++++.+.    ..+|+|
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~~iv   95 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWVV   95 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEEC----CEEEEE
Confidence            5799999999999999999997  5999999998654332 22334566666679999999999999876    458999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |||+++|+|.+++.+..+++.++..++.||+.||.|||++        +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        96 mEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--------~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~  167 (293)
T d1yhwa1          96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (293)
T ss_dssp             EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCcHHHeEECCCCcEeeccchhheeec
Confidence            9999999999999888999999999999999999999999        99999999999999999999999999998765


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      .....    .....||+.|+|||++.+.      .++.++|||||||++|||+||          ..||.+..    ..+
T Consensus       168 ~~~~~----~~~~~gt~~Y~aPE~~~~~------~~~~~~DiwSlGvilyemltG----------~~Pf~~~~----~~~  223 (293)
T d1yhwa1         168 PEQSK----RSTMVGTPYWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEG----------EPPYLNEN----PLR  223 (293)
T ss_dssp             STTCC----BCCCCSCGGGCCHHHHSSS------CBCTHHHHHHHHHHHHHHHHS----------SCTTTTSC----HHH
T ss_pred             ccccc----ccccccCCCccChhhhcCC------CCCchhceehHhHHHHHHhhC----------CCCCCCCC----HHH
Confidence            43222    2445799999999999876      677899999999999999999          77886531    223


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+........  +.++   .+..+++++.+||.+||+.||++|||+.|+++
T Consensus       224 ~~~~~~~~~~--~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         224 ALYLIATNGT--PELQ---NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHHHCS--CCCS---SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhCCC--CCCC---CcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            3333332222  2221   12456788999999999999999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.8e-55  Score=413.78  Aligned_cols=258  Identities=21%  Similarity=0.359  Sum_probs=210.9

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ...++|++.+.||+|+||+||+|.+  +|+.||||++............|+..+..++|||||+++|++.+..    .++
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~   89 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFY   89 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCC----eeE
Confidence            3447899999999999999999998  5889999998765544444556677777799999999999998764    369


Q ss_pred             eeecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        211 LVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +||||+++|+|.+++.+   ..+++..++.++.|||+||+|||++        +|+||||||+|||+++++.+||+|||+
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~--------~iiHrDlKp~NILl~~~~~~Kl~DFG~  161 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--------NFIHRDLAARNCLVGENHLVKVADFGL  161 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC--------CcccCccccCeEEECCCCcEEEccccc
Confidence            99999999999999854   5789999999999999999999998        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.........   .....||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       162 a~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~k~DiwS~Gv~l~ell~~----------~~p~~~~---  219 (287)
T d1opja_         162 SRLMTGDTYTA---HAGAKFPIKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATY----------GMSPYPG---  219 (287)
T ss_dssp             TTTCCSSSSEE---ETTEEECGGGCCHHHHHHC------CCSHHHHHHHHHHHHHHHHTT----------SCCSSTT---
T ss_pred             eeecCCCCcee---eccccccccccChHHHcCC------CCCchhhhhhHHHHHHHHHhC----------CCCCCCc---
Confidence            98765433221   2334688999999999876      778899999999999999998          4454332   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                       .....+.+.+.. ..++..+     ..+++++.+|+.+||+.||++|||+.||++.|+.+.+.
T Consensus       220 -~~~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         220 -IDLSQVYELLEK-DYRMERP-----EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             -CCHHHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             -chHHHHHHHHhc-CCCCCCC-----ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence             133444444432 3334444     34677899999999999999999999999999988654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-54  Score=406.55  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=190.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++.......   ...+.|+..+..++|||||++++++.+...  ..+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--~~~~   81 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN--TTLY   81 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC------CEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCC--CEEE
Confidence            6899999999999999999998  58999999986543222   223467777777999999999999876433  3579


Q ss_pred             eeecccCcccHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        211 LVTHYHSFGSLYDHLNR-----TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      +||||+++|+|.+++.+     ..+++..++.++.||+.||.|||+..   ....+|+||||||+|||++.++.+||+||
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---~~~~~IiHrDiKp~NIll~~~~~vkl~DF  158 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDF  158 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC---C---------CCGGGEEECTTSCEEECCH
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhc---CCCCCEEeCcCchhhcCcCCCCcEEEeec
Confidence            99999999999999853     56999999999999999999999871   00124999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|+.+......    .....||+.|||||++.+.      .++.++|||||||++|||+||          ..||... 
T Consensus       159 G~a~~~~~~~~~----~~~~~gt~~Y~APE~l~~~------~~~~~~DIwSlGvilyel~tg----------~~Pf~~~-  217 (269)
T d2java1         159 GLARILNHDTSF----AKAFVGTPYYMSPEQMNRM------SYNEKSDIWSLGCLLYELCAL----------MPPFTAF-  217 (269)
T ss_dssp             HHHHHC---------------CCCSCCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCSCCCS-
T ss_pred             cceeecccCCCc----cccCCCCcccCCHHHHcCC------CCChHHHHHhhCHHHHHHhhC----------CCCCCCC-
Confidence            999877543222    2346899999999999876      678899999999999999999          7777653 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                          ...++...+... ..+.++     ..+++++.+|+.+||+.||++|||+.|+++
T Consensus       218 ----~~~~~~~~i~~~-~~~~~~-----~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         218 ----SQKELAGKIREG-KFRRIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ----SHHHHHHHHHHT-CCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----CHHHHHHHHHcC-CCCCCC-----cccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                333444433322 223333     336678999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-54  Score=399.93  Aligned_cols=250  Identities=24%  Similarity=0.439  Sum_probs=208.8

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++|++.+.||+|+||+||+|++ +++.||||+++..........+|+..+..++||||++++|++.+..    .+++|||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~----~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR----PIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSS----SEEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----ceEEEEE
Confidence            6899999999999999999999 4668999999776555455566777777799999999999998763    4799999


Q ss_pred             ccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        215 YHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       215 ~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      |+++|+|.+++.  ...+++..+.+++.|+++||+|||+.        +|+||||||+|||+++++.+||+|||+++.+.
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~--------~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT--------TBCCSCCSGGGEEECTTCCEEECCCSSCCBCS
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc--------CcccccccceeEEEcCCCcEEECcchhheecc
Confidence            999999999974  46799999999999999999999998        99999999999999999999999999998765


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCCh
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....   ......||+.|+|||.+.+.      .++.++|||||||++|||+| |          ..||.+.     ..
T Consensus       152 ~~~~~---~~~~~~~t~~y~aPE~~~~~------~~~~ksDiwS~G~~l~el~t~g----------~~Pf~~~-----~~  207 (258)
T d1k2pa_         152 DDEYT---SSVGSKFPVRWSPPEVLMYS------KFSSKSDIWAFGVLMWEIYSLG----------KMPYERF-----TN  207 (258)
T ss_dssp             SSSCC---CCCCSCCCGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS----------CCTTTTS-----CH
T ss_pred             CCCce---eecccCCCCCcCCcHHhcCC------CCCcceeecccchhhHhHHhcC----------CCCCCCC-----CH
Confidence            43322   22345799999999999876      77889999999999999998 6          6788764     33


Q ss_pred             HHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH
Q psy14889        372 DDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIK  427 (443)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~  427 (443)
                      .++...+.. ..++..|     ..++.++.+||.+||+.||++|||+++|++.|.+
T Consensus       208 ~~~~~~i~~-~~~~~~p-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         208 SETAEHIAQ-GLRLYRP-----HLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHHT-TCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHh-CCCCCCc-----ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            445444432 3344444     3466789999999999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-54  Score=404.99  Aligned_cols=249  Identities=26%  Similarity=0.390  Sum_probs=196.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++......  ....+.|+..+..++|||||++++++.+.    ..+|+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~----~~~~i   80 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG----NIQYL   80 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET----TEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC----ceeEE
Confidence            6899999999999999999998  5899999998654321  22234566667779999999999999876    46899


Q ss_pred             eecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||||+++|+|.+++.+ ..+++.++..++.||+.||+|||++        +|+||||||+|||+++++.+||+|||+|+.
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~--------~IiHrDiKp~NILl~~~~~~KL~DFG~a~~  152 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--------GITHRDIKPENLLLDERDNLKISDFGLATV  152 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCccCcccHHHEEECCCCCEEEccchhhee
Confidence            9999999999999965 5799999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCC-CCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFES-FKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      +.......  .....+||+.|||||++.+.      .+ +.++|||||||++|||+||          ..||.....   
T Consensus       153 ~~~~~~~~--~~~~~~GT~~Y~APE~~~~~------~~~~~~~DiwSlGvilyeml~G----------~~pf~~~~~---  211 (271)
T d1nvra_         153 FRYNNRER--LLNKMCGTLPYVAPELLKRR------EFHAEPVDVWSCGIVLTAMLAG----------ELPWDQPSD---  211 (271)
T ss_dssp             CEETTEEC--CBCCCCSCGGGSCTHHHHCS------SBCHHHHHHHHHHHHHHHHHHS----------SCSCSSSST---
T ss_pred             eccCCccc--cccceeeCcCccCHhHhcCC------CCCCCceeeeHhHHHHHHHHhC----------CCCCCCCCh---
Confidence            65432211  12456899999999999876      33 4689999999999999999          677765321   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .......... .  ....+ .  ...+++++.+|+.+||+.||++|||++|+++
T Consensus       212 ~~~~~~~~~~-~--~~~~~-~--~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         212 SCQEYSDWKE-K--KTYLN-P--WKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TSHHHHHHHT-T--CTTST-T--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHhc-C--CCCCC-c--cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1112222211 1  11111 1  1345678999999999999999999999865

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-54  Score=404.40  Aligned_cols=255  Identities=20%  Similarity=0.329  Sum_probs=204.8

Q ss_pred             ccccccce-eeeecCeEEEEEEEC----CceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSEC-IGKGRYGEVWRGVWH----GENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~-lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|.+.+. ||+|+||+||+|.+.    +..||||++......  .....+|+..+.+++|||||+++|++.+.     .
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-----~   82 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-----A   82 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-----S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-----e
Confidence            56778885 999999999999873    447999998654322  22334566666779999999999998643     2


Q ss_pred             EEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      +++||||+++|+|.+++..  ..+++.+++.++.|||.||+|||++        +|+||||||+|||++.++.+||+|||
T Consensus        83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~--------~iiHrDlKp~Nill~~~~~~Kl~DFG  154 (285)
T d1u59a_          83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK--------NFVHRDLAARNVLLVNRHYAKISDFG  154 (285)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCcCchhheeeccCCceeeccch
Confidence            6899999999999999853  5799999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~  365 (443)
                      +|+.+....... .......||+.|+|||++.++      .++.++|||||||++|||+| |          ..||.+..
T Consensus       155 la~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~ksDVwS~Gv~l~E~lt~G----------~~Pf~~~~  217 (285)
T d1u59a_         155 LSKALGADDSYY-TARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGVTMWEALSYG----------QKPYKKMK  217 (285)
T ss_dssp             TCEECTTCSCEE-CCCCSSCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS----------CCTTTTCC
T ss_pred             hhhccccccccc-ccccccccCccccChHHHhCC------CCCccchhhcchHHHHHHHhCC----------CCCCCCCC
Confidence            998776533222 222345789999999999876      66789999999999999998 7          77887642


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                           ..++...+. ...++..|     ..+++++.+||.+||+.||++|||+.+|++.|+.+..+
T Consensus       218 -----~~~~~~~i~-~~~~~~~p-----~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         218 -----GPEVMAFIE-QGKRMECP-----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             -----THHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHH-cCCCCCCC-----CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                 233434333 33444444     34678899999999999999999999999999876643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-54  Score=399.05  Aligned_cols=242  Identities=24%  Similarity=0.430  Sum_probs=200.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||+|++....    ........|+..+..++|||||++++++.+.    ..+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~   81 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRV   81 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC----CEE
Confidence            5799999999999999999998  58899999986432    2223334567777779999999999999876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~--------~ivHrDiKp~Nill~~~~~~kl~DFG~a  153 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWS  153 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEEECCCCSC
T ss_pred             EEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeeeeeccccceecCCCCEeeccccee
Confidence            999999999999999965 6799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +......      .....||+.|||||++.+.      .++.++|||||||++|||++|          +.||.+.    
T Consensus       154 ~~~~~~~------~~~~~Gt~~Y~APE~~~~~------~~~~~~DiwSlGvilyell~G----------~~Pf~~~----  207 (263)
T d2j4za1         154 VHAPSSR------RTTLCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVG----------KPPFEAN----  207 (263)
T ss_dssp             SCCCCCC------CEETTEEGGGCCHHHHTTC------CCCTTHHHHHHHHHHHHHHHS----------SCTTCCS----
T ss_pred             eecCCCc------ccccCCCCcccCHHHHcCC------CCCchhhhhhHhHHHHHHhcC----------CCCCCCC----
Confidence            7655322      1335799999999999876      677899999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                       ...++...+.  ...+.+|     ..+++++.+|+.+||+.||++|||++|+++
T Consensus       208 -~~~~~~~~i~--~~~~~~p-----~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         208 -TYQETYKRIS--RVEFTFP-----DFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             -SHHHHHHHHH--TTCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CHHHHHHHHH--cCCCCCC-----ccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence             3333333332  2233333     336678999999999999999999999986

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-53  Score=402.83  Aligned_cols=263  Identities=24%  Similarity=0.329  Sum_probs=202.2

Q ss_pred             hccccccceeeeecCeEEEEEEECC------ceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWHG------ENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      .+.|++.++||+|+||+||+|.+.+      ..||||++.......  .....|+..+..++|||||+++|++.+..   
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~---   82 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---   82 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS---
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC---
Confidence            3578999999999999999998832      369999986543222  22345667777799999999999998764   


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       .+++||||+.+|+|.+++..  ..+++.+++.++.||+.||+|||+.        +|+||||||+||||+.++.+||+|
T Consensus        83 -~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~--------~iiHrDlKp~NILl~~~~~~Kl~D  153 (283)
T d1mqba_          83 -PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM--------NYVHRDLAARNILVNSNLVCKVSD  153 (283)
T ss_dssp             -SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECC
T ss_pred             -ceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc--------ccccCccccceEEECCCCeEEEcc
Confidence             47999999999999998854  5799999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+|+.+....... .......||+.|||||++.+.      .++.++|||||||++|||++|          ..|+...
T Consensus       154 FGla~~~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~------~~~~~sDI~S~Gvil~el~t~----------~~~~~~~  216 (283)
T d1mqba_         154 FGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAISYR------KFTSASDVWSFGIVMWEVMTY----------GERPYWE  216 (283)
T ss_dssp             CCC------------------CCCGGGSCHHHHHSC------CCCHHHHHHHHHHHHHHHHTT----------SCCTTTT
T ss_pred             cchhhcccCCCccc-eEeccCCCCccccCHHHHccC------CCCCcccccccHHHHHHHHhC----------CCCcccc
Confidence            99998765432221 122345689999999999876      777899999999999999997          3444332


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccccc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMYIH  436 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~~~  436 (443)
                          ....++...+. ...++..+     ..++.++.+|+.+||+.||++|||+.||++.|+++.+..+..+
T Consensus       217 ----~~~~~~~~~i~-~~~~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~~l~  278 (283)
T d1mqba_         217 ----LSNHEVMKAIN-DGFRLPTP-----MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK  278 (283)
T ss_dssp             ----CCHHHHHHHHH-TTCCCCCC-----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGG
T ss_pred             ----CCHHHHHHHHh-ccCCCCCc-----hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCccccc
Confidence                13344444443 23344444     3467889999999999999999999999999999988766554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-53  Score=403.69  Aligned_cols=252  Identities=23%  Similarity=0.381  Sum_probs=199.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.|++.+.||+|+||+||+|++  +|+.||||++....... .....|+..+..++|||||++++++.+.    ..+++|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~~~lv   87 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNLWIL   87 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEET----TEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC----CeEEEE
Confidence            5689999999999999999998  58899999986543322 2334555566669999999999999876    458999


Q ss_pred             ecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      |||+++|+|.+++.+  ..+++.++..++.||+.||.|||++        +|+||||||+|||++.++.+||+|||+|+.
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~--------~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~  159 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--------KIIHRDLKAGNILFTLDGDIKLADFGVSAK  159 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CEEEeecChhheeECCCCCEEEEechhhhc
Confidence            999999999999753  5699999999999999999999999        999999999999999999999999999976


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ........    ....||+.|+|||++....... ..++.++|||||||++|||+||          ..||.+..    .
T Consensus       160 ~~~~~~~~----~~~~Gt~~y~APE~l~~~~~~~-~~y~~k~DiwSlGvilyemltg----------~~Pf~~~~----~  220 (288)
T d2jfla1         160 NTRTIQRR----DSFIGTPYWMAPEVVMCETSKD-RPYDYKADVWSLGITLIEMAEI----------EPPHHELN----P  220 (288)
T ss_dssp             CHHHHHHH----TCCCSCCTTCCHHHHTTCSTTT-SSTTTHHHHHHHHHHHHHHHHS----------SCTTTTSC----G
T ss_pred             cCCCcccc----cccccccccCCHHHHhhcccCC-CCCChhhhHHHHHHHHHHHhhC----------CCCCCCCC----H
Confidence            55432221    3457999999999986432211 1677899999999999999999          77886642    2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+.+.+....  ..+.++   .+..+++++.+||.+||+.||++|||+.|+++
T Consensus       221 ~~~~~~i~~~--~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         221 MRVLLKIAKS--EPPTLA---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             GGHHHHHHHS--CCCCCS---SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHcC--CCCCCC---ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2233333322  122222   12456788999999999999999999999876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-53  Score=410.49  Aligned_cols=252  Identities=24%  Similarity=0.397  Sum_probs=199.8

Q ss_pred             hccccccceeeeecCeEEEEEEEC--C-----ceeEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccCC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH--G-----ENVAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSRN  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~--~-----~~vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~  204 (443)
                      .++|++.+.||+|+||+||+|++.  +     ..||||.+.....  .......|+..+..+ +|||||+++|++.+.. 
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-  114 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG-  114 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC-
Confidence            478999999999999999999873  2     2689998854322  222334455555556 8999999999998774 


Q ss_pred             cccEEEeeecccCcccHHHHhccc------------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCC
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHLNRT------------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP  260 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l~~~------------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~  260 (443)
                         .+++|||||++|+|.++++..                        .+++..++.++.||++||+|||++        
T Consensus       115 ---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--------  183 (325)
T d1rjba_         115 ---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--------  183 (325)
T ss_dssp             ---SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred             ---eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC--------
Confidence               479999999999999999542                        389999999999999999999999        


Q ss_pred             CeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHH
Q psy14889        261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV  340 (443)
Q Consensus       261 ~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvv  340 (443)
                      +||||||||+|||++.++.+||+|||+|+.........  ......||+.|||||++.++      .++.++|||||||+
T Consensus       184 ~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~------~~~~~~DiwS~Gvi  255 (325)
T d1rjba_         184 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV--VRGNARLPVKWMAPESLFEG------IYTIKSDVWSYGIL  255 (325)
T ss_dssp             TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE--EETTEEECGGGCCHHHHHHC------CCCHHHHHHHHHHH
T ss_pred             CeeeccCchhccccccCCeEEEeeccccccccCCCcee--eeccccCCCccCChHHHcCC------CCCcceeccchhHH
Confidence            99999999999999999999999999998765433221  12345689999999999876      77899999999999


Q ss_pred             HHHHHh-cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH
Q psy14889        341 LWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL  419 (443)
Q Consensus       341 l~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  419 (443)
                      +|||+| |          ..||.+..    ....+.+.+. ...++..|     ..+++++.+||.+||+.||++|||++
T Consensus       256 l~emlt~g----------~~Pf~~~~----~~~~~~~~~~-~~~~~~~p-----~~~~~~l~~li~~cl~~dP~~RPt~~  315 (325)
T d1rjba_         256 LWEIFSLG----------VNPYPGIP----VDANFYKLIQ-NGFKMDQP-----FYATEEIYIIMQSCWAFDSRKRPSFP  315 (325)
T ss_dssp             HHHHTTTS----------CCSSTTCC----CSHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCC----------CCCCCCCC----HHHHHHHHHh-cCCCCCCC-----CcCCHHHHHHHHHHcCCChhHCcCHH
Confidence            999998 7          67776542    2233444433 33344444     34677899999999999999999999


Q ss_pred             HHHHHHH
Q psy14889        420 RVKKTLI  426 (443)
Q Consensus       420 evl~~L~  426 (443)
                      ||++.|.
T Consensus       316 ei~~~L~  322 (325)
T d1rjba_         316 NLTSFLG  322 (325)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999985

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-53  Score=396.36  Aligned_cols=248  Identities=24%  Similarity=0.393  Sum_probs=195.8

Q ss_pred             ccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      |++.+.||+|+||+||+|.+  ++..||+|.+......   ....+.|+..+..++|||||++++++.+.......+++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            47788999999999999998  5789999988654322   222356777777799999999999987654434678999


Q ss_pred             ecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc-CCCcEEEEecCCccc
Q psy14889        213 THYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVS  290 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~-~~~~~kl~DfGla~~  290 (443)
                      |||+++|+|.+++.+ ..+++..+..++.||++||+|||++      .++|+||||||+|||++ +++.+||+|||+|+.
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~------~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR------TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS------SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC------CCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            999999999999965 6799999999999999999999998      22499999999999996 478999999999975


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .....      .....||+.|||||++.+       .++.++|||||||++|||++|          +.||.+..    .
T Consensus       165 ~~~~~------~~~~~GT~~Y~aPE~~~~-------~~~~~~DIwSlGvilyel~~g----------~~Pf~~~~----~  217 (270)
T d1t4ha_         165 KRASF------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATS----------EYPYSECQ----N  217 (270)
T ss_dssp             CCTTS------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHS----------SCTTTTCS----S
T ss_pred             ccCCc------cCCcccCccccCHHHhCC-------CCCCcCchhhHHHHHHHHHHC----------CCCCCCcc----c
Confidence            44321      124579999999999864       567899999999999999999          77886531    2


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ...+.+.+......+.+     +...++++.+|+.+||+.||++|||+.|+++
T Consensus       218 ~~~~~~~i~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         218 AAQIYRRVTSGVKPASF-----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHTTTCCCGGG-----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCCCccc-----CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            33444433322211111     2335567999999999999999999999975

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-53  Score=399.58  Aligned_cols=247  Identities=21%  Similarity=0.358  Sum_probs=195.7

Q ss_pred             ceeeeecCeEEEEEEEC----CceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeec
Q psy14889        142 ECIGKGRYGEVWRGVWH----GENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTH  214 (443)
Q Consensus       142 ~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e  214 (443)
                      ++||+|+||+||+|.+.    ++.||||++......   ......|+..+.+++|||||+++|++.+.     ..+||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-----~~~lvmE   87 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-----SWMLVME   87 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-----SEEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-----CEEEEEE
Confidence            46999999999999873    457999998643322   12234566667779999999999998543     2589999


Q ss_pred             ccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccc
Q psy14889        215 YHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ  293 (443)
Q Consensus       215 ~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~  293 (443)
                      |+++|+|.+++++ ..+++.+++.++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus        88 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~--------~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~  159 (277)
T d1xbba_          88 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--------NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  159 (277)
T ss_dssp             CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             cCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC--------CcccCCCcchhhcccccCcccccchhhhhhccc
Confidence            9999999999975 6699999999999999999999998        999999999999999999999999999987654


Q ss_pred             cCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCCCCCCCChH
Q psy14889        294 LSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       294 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ...... ......||+.|||||.+.+.      .++.++|||||||++|||+| |          +.||.+.     ...
T Consensus       160 ~~~~~~-~~~~~~gt~~y~APE~l~~~------~~~~~sDiwS~Gv~l~ellt~g----------~~Pf~~~-----~~~  217 (277)
T d1xbba_         160 DENYYK-AQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYG----------QKPYRGM-----KGS  217 (277)
T ss_dssp             TCSEEE-C----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTT----------CCSSTTC-----CHH
T ss_pred             cccccc-cccccCCCceecCchhhcCC------CCCchhhhccchhhhhHHhhCC----------CCCCCCC-----CHH
Confidence            332211 12345789999999999876      66789999999999999998 7          7788764     234


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHh
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA  429 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~  429 (443)
                      ++...+. ...++..|     ..+++++.+||.+||+.||++|||+.+|++.|+..-
T Consensus       218 ~~~~~i~-~~~~~~~p-----~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         218 EVTAMLE-KGERMGCP-----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             HHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCCCCC-----cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            4444443 23444444     346788999999999999999999999999888754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-53  Score=398.73  Aligned_cols=258  Identities=23%  Similarity=0.326  Sum_probs=202.8

Q ss_pred             hccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeee
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVT  213 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~  213 (443)
                      .++|++.+.||+|+||+||+|.+ +++.||||++............|+..+.+++|||||+++|++.+.     .+++||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-----~~~lv~   90 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIVT   90 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecC-----CeEEEE
Confidence            46899999999999999999998 456899999876555444455666667779999999999998543     258999


Q ss_pred             cccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        214 HYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       214 e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ||+++|+|..++..   ..+++.+++.++.||+.||+|||+.        +|+||||||+||||+.++.+||+|||+|+.
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~--------~ivH~DlKp~NIll~~~~~~kl~DfGla~~  162 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--------NYVHRDLRAANILVGENLVCKVADFGLARL  162 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh--------heecccccceEEEECCCCcEEEcccchhhh
Confidence            99999999999864   4699999999999999999999998        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......   ......||+.|+|||++..+      .++.++|||||||++|||+||          ..||...    ..
T Consensus       163 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDI~S~Giil~el~t~----------~~p~~~~----~~  219 (285)
T d1fmka3         163 IEDNEYT---ARQGAKFPIKWTAPEAALYG------RFTIKSDVWSFGILLTELTTK----------GRVPYPG----MV  219 (285)
T ss_dssp             ----------------CCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTT----------TCCSSTT----CC
T ss_pred             ccCCCce---eeccccccccccChHHHhCC------CCCcHHhhhcchHHHHHHHhC----------CCCCCCC----CC
Confidence            6543221   12335789999999999877      777899999999999999998          3444332    13


Q ss_pred             hHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcccc
Q psy14889        371 FDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADMY  434 (443)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~~  434 (443)
                      ..++...+.. ..++..+     ..+++++.+|+.+||+.||++|||+++|++.|++......+
T Consensus       220 ~~~~~~~i~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         220 NREVLDQVER-GYRMPCP-----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             HHHHHHHHHT-TCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             HHHHHHHHHh-cCCCCCC-----cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence            3444444432 2333333     34678899999999999999999999999999987765544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-53  Score=394.59  Aligned_cols=251  Identities=28%  Similarity=0.504  Sum_probs=198.9

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHY  215 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~  215 (443)
                      ++|++.+.||+|+||.||+|.++|+.||||+++.... .....+|+..+.+++||||++++|++.+...   .+++||||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~-~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~ey   82 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEY   82 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECC
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHH-HHHHHHHHHHHHhCCCCCEeeEEEEEEecCC---cEEEEEec
Confidence            6799999999999999999999999999999865432 2334456666777999999999999865432   36999999


Q ss_pred             cCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccccc
Q psy14889        216 HSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS  292 (443)
Q Consensus       216 ~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~  292 (443)
                      +++|+|.+++..   ..+++..++.++.||+.||.|||+.        +|+||||||+|||++.++.+||+|||+++...
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~--------~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~  154 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--------NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  154 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC--------ceeccccchHhheecCCCCEeecccccceecC
Confidence            999999999964   3499999999999999999999998        99999999999999999999999999997654


Q ss_pred             ccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCChH
Q psy14889        293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD  372 (443)
Q Consensus       293 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~  372 (443)
                      ...       ....+|..|+|||++.++      .+++++|||||||++|||+|+.         ..||...     ...
T Consensus       155 ~~~-------~~~~~~~~y~aPE~l~~~------~~t~~sDIwSfG~il~el~t~~---------~~p~~~~-----~~~  207 (262)
T d1byga_         155 STQ-------DTGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFG---------RVPYPRI-----PLK  207 (262)
T ss_dssp             --------------CCTTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS---------CCSCTTS-----CGG
T ss_pred             CCC-------ccccccccCCChHHHhCC------CCChHHHHHhHHHHHHHHHHCC---------CCCCCCC-----CHH
Confidence            322       233678899999999876      7789999999999999999841         4555543     223


Q ss_pred             HHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      ++...+. ...++.++.     .+++++.+|+.+||+.||++|||+.+|++.|+++...
T Consensus       208 ~~~~~i~-~~~~~~~~~-----~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         208 DVVPRVE-KGYKMDAPD-----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             GHHHHHT-TTCCCCCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCCCCCc-----cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            3333332 234555553     3567899999999999999999999999999998654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-53  Score=402.77  Aligned_cols=246  Identities=25%  Similarity=0.347  Sum_probs=198.4

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----hHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+.|+..+.||+|+||+||+|++  +|+.||||++.......    ...+.|+..+..++|||||++++++.+.    ..
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~   89 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----HT   89 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET----TE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC----CE
Confidence            35699999999999999999997  58899999986543221    2234677777789999999999999876    45


Q ss_pred             EEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCC
Q psy14889        209 LWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL  287 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGl  287 (443)
                      +|+|||||.+|+|..++. +..+++.++..++.||+.||.|||++        +|+||||||+|||++.++.+||+|||+
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~--------~iiHrDiKp~NILl~~~~~~Kl~DFG~  161 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--------NMIHRDVKAGNILLSEPGLVKLGDFGS  161 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred             EEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEeccCCCcceEEECCCCCEEEeeccc
Confidence            899999999999987664 46799999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.....        ....||+.|||||++.+....   .|+.++|||||||++|||++|          ..||.+..  
T Consensus       162 a~~~~~~--------~~~~GT~~Y~APE~~~~~~~~---~y~~~~DiwSlGvilyel~~g----------~~Pf~~~~--  218 (309)
T d1u5ra_         162 ASIMAPA--------NSFVGTPYWMAPEVILAMDEG---QYDGKVDVWSLGITCIELAER----------KPPLFNMN--  218 (309)
T ss_dssp             CBSSSSB--------CCCCSCGGGCCHHHHTTTTSC---CBCTHHHHHHHHHHHHHHHHS----------SCTTTTSC--
T ss_pred             ccccCCC--------CccccCccccCHHHHhccCCC---CcCchhhhhhHHHHHHHHHHC----------CCCCCCCC--
Confidence            9765432        234799999999998653211   577899999999999999999          77876531  


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ..+.+..... . ..+.++    +..+++++.+||.+||+.||++|||+.|+++
T Consensus       219 --~~~~~~~i~~-~-~~~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         219 --AMSALYHIAQ-N-ESPALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             --HHHHHHHHHH-S-CCCCCS----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --HHHHHHHHHh-C-CCCCCC----CCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence              2223333332 2 222222    2345678999999999999999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-53  Score=401.36  Aligned_cols=250  Identities=20%  Similarity=0.298  Sum_probs=188.1

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccE
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      .+.+.|++.+.||+|+||+||+|++  +|+.||||++......  ....+.|+..+..++|||||++++++.+.    ..
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----~~   81 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG----GH   81 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS----SE
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CE
Confidence            3457799999999999999999998  5889999998654322  22234566666779999999999999876    46


Q ss_pred             EEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc---CCCcEEEEe
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK---TNGTCVIAD  284 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~---~~~~~kl~D  284 (443)
                      +|+|||||++|+|.+++.+ ..+++.++..++.||+.||+|||+.        +|+||||||+|||+.   +++.+||+|
T Consensus        82 ~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~--------~iiHrDiKp~Nil~~~~~~~~~vkl~D  153 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL--------GIVHRDLKPENLLYYSLDEDSKIMISD  153 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc--------eeeeEEecccceeecccCCCceEEEec
Confidence            8999999999999999964 6799999999999999999999999        999999999999995   478999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      ||+|+.......     ....+||+.|||||++.+.      .++.++|||||||++|||++|          ..||.+.
T Consensus       154 FG~a~~~~~~~~-----~~~~~GT~~y~APE~~~~~------~~~~~~DiwSlGvilyell~g----------~~Pf~~~  212 (307)
T d1a06a_         154 FGLSKMEDPGSV-----LSTACGTPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCG----------YPPFYDE  212 (307)
T ss_dssp             C-----------------------CTTSCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCSCCCS
T ss_pred             cceeEEccCCCe-----eeeeeeCccccCcHHHcCC------CCCcHHHhhhhhHHHHHHHhC----------CCCCCCC
Confidence            999986653321     2345799999999999876      677899999999999999999          7787653


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                           ....+...+.........+   ....+++++.+|+.+||+.||++|||+.|+++
T Consensus       213 -----~~~~~~~~i~~~~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         213 -----NDAKLFEQILKAEYEFDSP---YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             -----SHHHHHHHHHTTCCCCCTT---TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----CHHHHHHHHhccCCCCCCc---cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 2233333333222222111   12346778999999999999999999999987

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-53  Score=398.13  Aligned_cols=247  Identities=22%  Similarity=0.293  Sum_probs=197.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++....    ........|+..+..++|||||++++++.+.    ..+
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~~   83 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----EKL   83 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS----SEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC----CEE
Confidence            6799999999999999999998  58999999986432    1222334566666669999999999998876    458


Q ss_pred             EeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||||+++|+|.+++. .+.+++..+..++.|++.||+|||+.        +|+||||||+|||+++++.+||+|||+|
T Consensus        84 ~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~--------~iiHrDiKp~NIll~~~~~vkl~DFG~a  155 (288)
T d1uu3a_          84 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK--------GIIHRDLKPENILLNEDMHIQITDFGTA  155 (288)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc--------cEEcCcCCccccccCCCceEEecccccc
Confidence            99999999999999886 46899999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+.......  ......||+.|+|||++.+.      .++.++|||||||++|||+||          ..||...    
T Consensus       156 ~~~~~~~~~~--~~~~~~GT~~Y~APE~~~~~------~~~~~~DiwSlGvilyell~g----------~~Pf~~~----  213 (288)
T d1uu3a_         156 KVLSPESKQA--RANSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAG----------LPPFRAG----  213 (288)
T ss_dssp             EECC------------CCCCGGGCCHHHHHTC------CCCHHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             eecccCCccc--ccccccCCccccCceeeccC------CCCcccceehhhHHHHHHhhC----------CCCCCCc----
Confidence            8775432221  12345799999999999876      677899999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       ....+...+.  ...+.+|     ..+++++.+||.+||+.||++|||++|+++.
T Consensus       214 -~~~~~~~~i~--~~~~~~p-----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         214 -NEYLIFQKII--KLEYDFP-----EKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             -SHHHHHHHHH--TTCCCCC-----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             -CHHHHHHHHH--cCCCCCC-----ccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence             2233333332  2233344     2356789999999999999999999997553

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-52  Score=399.66  Aligned_cols=259  Identities=22%  Similarity=0.352  Sum_probs=206.6

Q ss_pred             hhhhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeecccc
Q psy14889        132 RTLAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTS  202 (443)
Q Consensus       132 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~  202 (443)
                      +...++|++.+.||+|+||+||+|++.       ++.||||++.......  .....|+..+..++||||+++++++...
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            334578999999999999999999874       3689999986543322  2234566677779999999999999876


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-------------------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCC
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-------------------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQ  257 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~  257 (443)
                      .    ..++||||+++|+|.+++..                         ..+++..++.++.|++.||+|||+.     
T Consensus        89 ~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-----  159 (301)
T d1lufa_          89 K----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-----  159 (301)
T ss_dssp             S----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             C----ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-----
Confidence            4    36899999999999999853                         2388999999999999999999998     


Q ss_pred             CCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHH
Q psy14889        258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL  337 (443)
Q Consensus       258 ~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~  337 (443)
                         +||||||||+|||++.++.+||+|||+|+.........  ......||+.|+|||.+.+.      .++.++|||||
T Consensus       160 ---~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~t~ksDVwS~  228 (301)
T d1lufa_         160 ---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK--ADGNDAIPIRWMPPESIFYN------RYTTESDVWAY  228 (301)
T ss_dssp             ---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC------CCBCGGGCCHHHHHHC------CCCHHHHHHHH
T ss_pred             ---CeEeeEEcccceEECCCCcEEEccchhheeccCCcccc--ccCCCCcCcCcCCHHHHccC------CCChhhhhccc
Confidence               99999999999999999999999999998665433222  22445788999999999876      78899999999


Q ss_pred             HHHHHHHHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc
Q psy14889        338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS  417 (443)
Q Consensus       338 Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  417 (443)
                      ||++|||++|.         ..||.+.     ...++...+. ...++..|     ..+++++.+|+.+||+.||++|||
T Consensus       229 Gvvl~ell~~~---------~~p~~~~-----~~~e~~~~v~-~~~~~~~p-----~~~~~~~~~li~~cl~~~P~~RPt  288 (301)
T d1lufa_         229 GVVLWEIFSYG---------LQPYYGM-----AHEEVIYYVR-DGNILACP-----ENCPLELYNLMRLCWSKLPADRPS  288 (301)
T ss_dssp             HHHHHHHHTTT---------CCTTTTS-----CHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhHHHHHccC---------CCCCCCC-----CHHHHHHHHH-cCCCCCCC-----ccchHHHHHHHHHHcCCChhHCcC
Confidence            99999999982         2456553     3334444433 23344444     346778999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q psy14889        418 ALRVKKTLIKLAC  430 (443)
Q Consensus       418 ~~evl~~L~~l~~  430 (443)
                      |.||++.|+++.+
T Consensus       289 ~~ev~~~L~~i~~  301 (301)
T d1lufa_         289 FCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999853

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-53  Score=406.47  Aligned_cols=257  Identities=22%  Similarity=0.314  Sum_probs=198.9

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ..++|++.+.||+|+||+||+|++  +|+.||+|++.......  .....|+..+..++|||||++++++.+.    ..+
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----~~~   79 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEI   79 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS----SEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEE
Confidence            357899999999999999999998  58999999986543222  2334677777779999999999999876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+++|+|.+++.+ ..+++..+..++.|++.||.|||+.+       +|+||||||+|||++.++.+||+|||+|
T Consensus        80 ~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~-------~IiHRDiKP~NILl~~~~~vkl~DFGla  152 (322)
T d1s9ja_          80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-------KIMHRDVKPSNILVNSRGEIKLCDFGVS  152 (322)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH-------CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC-------CEEccccCHHHeeECCCCCEEEeeCCCc
Confidence            999999999999999964 67999999999999999999999732       8999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+....      ....+||+.|+|||++.+.      .++.++|||||||++|||++|+          .||.......
T Consensus       153 ~~~~~~~------~~~~~GT~~Y~APEvl~~~------~y~~~~DiWSlGvil~ell~G~----------~Pf~~~~~~~  210 (322)
T d1s9ja_         153 GQLIDSM------ANSFVGTRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMAVGR----------YPIPPPDAKE  210 (322)
T ss_dssp             HHHHHHT------C---CCSSCCCCHHHHHCS------CCCTTHHHHHHHHHHHHHHHSS----------CCSSCCCTTH
T ss_pred             cccCCCc------cccccCCccccCchHHcCC------CCCcHHHHHHHHHHHHHHHHCC----------CCCCCCCHHH
Confidence            8765322      2345899999999999886      7789999999999999999994          4443311000


Q ss_pred             -------------------------------------CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCC
Q psy14889        369 -------------------------------------PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQN  411 (443)
Q Consensus       369 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  411 (443)
                                                           .......... .....+..+    ....+.++.+|+.+||+.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~s~~~~dli~~~L~~d  285 (322)
T d1s9ja_         211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLP----SGVFSLEFQDFVNKCLIKN  285 (322)
T ss_dssp             HHHHC------------------------------CCCCHHHHHHHH-HTSCCCCCC----BTTBCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhh-hccCCccCc----cccCCHHHHHHHHHHcCCC
Confidence                                                 0000000111 011112222    2234578999999999999


Q ss_pred             cCCCCcHHHHHH--HHHHH
Q psy14889        412 ANVRLSALRVKK--TLIKL  428 (443)
Q Consensus       412 P~~Rps~~evl~--~L~~l  428 (443)
                      |++|||++|+++  .+++.
T Consensus       286 P~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         286 PAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             TTTSCCHHHHHTSHHHHHH
T ss_pred             hhHCcCHHHHhhCHhhCcC
Confidence            999999999987  35543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-52  Score=398.68  Aligned_cols=261  Identities=22%  Similarity=0.377  Sum_probs=196.0

Q ss_pred             hhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHh-ccCCCceeeeeeccccC
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVL-LRHENILGYIGSDMTSR  203 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~-l~H~nIv~l~g~~~~~~  203 (443)
                      ..++|++.+.||+|+||.||+|.+.       ++.||||++.......  .....|...+.. .+|+||+.+++++....
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            3478999999999999999999872       3579999986433221  111223333322 47999999999987654


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeC
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD  266 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrD  266 (443)
                      .   .+++|||||++|+|.++++.                 ..+++.+++.++.||++||.|||++        +|+|||
T Consensus        91 ~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~--------~ivHrD  159 (299)
T d1ywna1          91 G---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--------KCIHRD  159 (299)
T ss_dssp             S---CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT--------TCCCSC
T ss_pred             C---eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC--------CCcCCc
Confidence            3   47999999999999999853                 2488999999999999999999999        999999


Q ss_pred             CCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh
Q psy14889        267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR  346 (443)
Q Consensus       267 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt  346 (443)
                      |||+||||++++.+||+|||+|+.........  ......||+.|+|||++.+.      .++.++|||||||++|||+|
T Consensus       160 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~APE~l~~~------~~~~~sDiwS~Gvil~ellt  231 (299)
T d1ywna1         160 LAARNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDR------VYTIQSDVWSFGVLLWEIFS  231 (299)
T ss_dssp             CCGGGEEECGGGCEEECC------CCSCTTSC--CTTSCCCGGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHT
T ss_pred             CCccceeECCCCcEEEccCcchhhcccccccc--ccCceeeCccccchhHhhcC------CCCcccceeehHHHHHHHHh
Confidence            99999999999999999999998765433221  22455799999999999876      77899999999999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHH
Q psy14889        347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLI  426 (443)
Q Consensus       347 g~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~  426 (443)
                      |.         ..||....    ..+.+...+. ...++..|     +.+++++.+||.+||+.||++|||+.||++.|+
T Consensus       232 ~~---------~~p~~~~~----~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~  292 (299)
T d1ywna1         232 LG---------ASPYPGVK----IDEEFCRRLK-EGTRMRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG  292 (299)
T ss_dssp             TS---------CCSSTTCC----CSHHHHHHHH-HTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CC---------CCCCCCCC----HHHHHHHHHh-cCCCCCCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            72         34665432    2233333333 23444444     336678999999999999999999999999999


Q ss_pred             HHhhcc
Q psy14889        427 KLACAD  432 (443)
Q Consensus       427 ~l~~~~  432 (443)
                      ++.+++
T Consensus       293 ~ilq~n  298 (299)
T d1ywna1         293 NLLQAN  298 (299)
T ss_dssp             HHHHHH
T ss_pred             HHHhCC
Confidence            998754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-52  Score=392.09  Aligned_cols=254  Identities=22%  Similarity=0.414  Sum_probs=193.7

Q ss_pred             hccccccceeeeecCeEEEEEEEC-----CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH-----GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .++|++.+.||+|+||.||+|.+.     +..||||.+.......  .....|+..+..++|||||+++|++.+.     
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----   80 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-----   80 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----
Confidence            468999999999999999999873     2458888875433222  2334677777779999999999998643     


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      .+++||||+++|+|.+++..  ..+++.+++.++.||++||.|||+.        +|+||||||+||++++++.+||+||
T Consensus        81 ~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~--------~iiHrDlKp~NIll~~~~~~Kl~Df  152 (273)
T d1mp8a_          81 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--------RFVHRDIAARNVLVSSNDCVKLGDF  152 (273)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred             eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc--------CeeccccchhheeecCCCcEEEccc
Confidence            36999999999999998753  5689999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~~  364 (443)
                      |+|+.+......   ......||+.|+|||++.+.      .++.++|||||||++|||+| |          ..||.+.
T Consensus       153 G~a~~~~~~~~~---~~~~~~gt~~y~apE~l~~~------~~~~~~DiwSlGvil~e~lt~g----------~~P~~~~  213 (273)
T d1mp8a_         153 GLSRYMEDSTYY---KASKGKLPIKWMAPESINFR------RFTSASDVWMFGVCMWEILMHG----------VKPFQGV  213 (273)
T ss_dssp             ---------------------CCGGGCCHHHHHHC------CCSHHHHHHHHHHHHHHHHTTS----------CCTTTTC
T ss_pred             hhheeccCCcce---eccceecCcccchhhHhccC------CCCCccccccchHHHHHHHhcC----------CCCCCCC
Confidence            999876543222   12345689999999999876      77789999999999999998 6          6677654


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                      .     ..++...+. ...++..+     ..+++++.+||.+||+.||++|||+.||++.|+++.+.
T Consensus       214 ~-----~~~~~~~i~-~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         214 K-----NNDVIGRIE-NGERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             C-----GGGHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C-----HHHHHHHHH-cCCCCCCC-----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            2     233333332 23334443     34678899999999999999999999999999998765

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-52  Score=398.28  Aligned_cols=255  Identities=22%  Similarity=0.418  Sum_probs=199.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc----eeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE----NVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~----~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      .+|++.+.||+|+||+||+|.+  +|+    .||||.+......  ......|+..+..++|||||+++|++.+..    
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----   84 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST----   84 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS----
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----
Confidence            4699999999999999999998  343    5888887543222  223345666666699999999999997653    


Q ss_pred             EEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                       .++++||+.+|+|.+++..  ..+++..++.++.|||.||+|||++        +|+||||||+|||++.++.+||+||
T Consensus        85 -~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~--------~iiHrDlKp~NIll~~~~~~kl~DF  155 (317)
T d1xkka_          85 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--------RLVHRDLAARNVLVKTPQHVKITDF  155 (317)
T ss_dssp             -EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEEEETTEEEECCC
T ss_pred             -eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCcchhhcceeCCCCCeEeecc
Confidence             4788999999999998864  5799999999999999999999998        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|+.........  ......||+.|+|||++.++      .++.++|||||||++|||+|+.         ..||.+. 
T Consensus       156 Gla~~~~~~~~~~--~~~~~~gt~~y~APE~l~~~------~~~~~sDvwS~Gvil~el~t~g---------~~p~~~~-  217 (317)
T d1xkka_         156 GLAKLLGAEEKEY--HAEGGKVPIKWMALESILHR------IYTHQSDVWSYGVTVWELMTFG---------SKPYDGI-  217 (317)
T ss_dssp             SHHHHTTTTCC----------CCTTTSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTTS---------CCTTTTS-
T ss_pred             ccceecccccccc--cccccccCccccChHHHhcC------CCChhhhhhhHHHHHHHHHHCC---------CCCCCCC-
Confidence            9998765433222  12334689999999999877      7789999999999999999941         6677654 


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                          ...++...+.. ..++..|     ..++.++.+|+.+||+.||++|||+.||++.|+++...
T Consensus       218 ----~~~~~~~~i~~-~~~~~~p-----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         218 ----PASEISSILEK-GERLPQP-----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             ----CGGGHHHHHHH-TCCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ----CHHHHHHHHHc-CCCCCCC-----cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence                22344444432 3344444     34678899999999999999999999999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-51  Score=387.42  Aligned_cols=264  Identities=21%  Similarity=0.309  Sum_probs=203.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc----chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA----SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~----~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      +.++|++.+.||+|+||+||+|++  +|+.||||++......    ....+.|+..+..++|||||++++++........
T Consensus         5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            357899999999999999999997  5899999998654322    1223567777777999999999999987765556


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|+||||+++|+|.+++.. +.+++.++..++.||+.||+|||++        +|+||||||+|||++.++..+|+|||
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~--------~iiHrDiKP~NIll~~~~~~~l~d~~  156 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN--------GIIHRDVKPANIMISATNAVKVMDFG  156 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEETTSCEEECCCT
T ss_pred             eEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC--------CccCccccCcccccCccccceeehhh
Confidence            78999999999999998854 6799999999999999999999998        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      .+......... ........||+.|+|||++.+.      .++.++|||||||++|||+||          ..||.+.. 
T Consensus       157 ~~~~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~------~~~~~~DiwSlGvilyelltG----------~~Pf~~~~-  218 (277)
T d1o6ya_         157 IARAIADSGNS-VTQTAAVIGTAQYLSPEQARGD------SVDARSDVYSLGCVLYEVLTG----------EPPFTGDS-  218 (277)
T ss_dssp             TCEECC-----------------TTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCSCCCSS-
T ss_pred             hhhhhcccccc-ccccccccCcccccCHHHHcCC------CCCcceecccchHHHHHHHhC----------CCCCCCcC-
Confidence            98765443222 1123456799999999999876      677899999999999999999          77876531 


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-cHHHHHHHHHHHhh
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-SALRVKKTLIKLAC  430 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~l~~  430 (443)
                         ..+...+.+.. ...+  + ......+++++.+++.+||+.||++|| |++++++.|.++.+
T Consensus       219 ---~~~~~~~~~~~-~~~~--~-~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         219 ---PVSVAYQHVRE-DPIP--P-SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             ---HHHHHHHHHHC-CCCC--G-GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHhc-CCCC--C-chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence               12223333322 1111  1 112244678899999999999999999 89999999998763

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-52  Score=389.62  Aligned_cols=253  Identities=25%  Similarity=0.419  Sum_probs=194.9

Q ss_pred             ccccccceeeeecCeEEEEEEEC---C--ceeEEEEeeccCc----cchHHHHHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWH---G--ENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~---~--~~vAvK~~~~~~~----~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|++.+.||+|+||.||+|+++   +  ..||||++.....    .......|+..+..++|||||+++|++.+.    
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~----   83 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP----   83 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec----
Confidence            67999999999999999999873   2  3689998754321    112234666667779999999999999754    


Q ss_pred             cEEEeeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEe
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD  284 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~D  284 (443)
                       .+++||||+++|+|.+++..  ..+++..++.++.|||.||.|||++        +|+||||||+|||++.++.+||+|
T Consensus        84 -~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~--------~iiHrDikp~NIll~~~~~vkl~D  154 (273)
T d1u46a_          84 -PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK--------RFIHRDLAARNLLLATRDLVKIGD  154 (273)
T ss_dssp             -SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEEEETTEEEECC
T ss_pred             -chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC--------CEeeeeecHHHhccccccceeecc
Confidence             25899999999999988753  5699999999999999999999998        999999999999999999999999


Q ss_pred             cCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHh-cccCCCcccccCCCCCC
Q psy14889        285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR-RTKANGIFEEYKAPYHD  363 (443)
Q Consensus       285 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ellt-g~~~~~~~~~~~~P~~~  363 (443)
                      ||+++.+....... .......||..|+|||.+.+.      .++.++|||||||++|||+| |          ..||.+
T Consensus       155 fGl~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~------~~~~~~Di~S~Gvil~emlt~G----------~~Pf~~  217 (273)
T d1u46a_         155 FGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYG----------QEPWIG  217 (273)
T ss_dssp             CTTCEECCC-CCEE-EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTS----------CCTTTT
T ss_pred             chhhhhcccCCCcc-eecCccccCcccCCHHHHhCC------CCCcchhhhhhHHHHHHHHhCC----------CCCCCC
Confidence            99998775543322 122344678899999999876      66689999999999999998 7          678865


Q ss_pred             CCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHH
Q psy14889        364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL  428 (443)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l  428 (443)
                      .     ...+....+.....++..+     ..+++.+.+|+.+||+.||++|||+.||++.|.++
T Consensus       218 ~-----~~~~~~~~i~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         218 L-----NGSQILHKIDKEGERLPRP-----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             C-----CHHHHHHHHHTSCCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c-----CHHHHHHHHHhCCCCCCCc-----ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            4     3344444444444444443     34667899999999999999999999999999875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.3e-51  Score=399.44  Aligned_cols=248  Identities=17%  Similarity=0.323  Sum_probs=199.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc-hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS-WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~-~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      -++|++.+.||+|+||.||+|++  +|+.||||++....... ...+.|+..+..++|||||++++++.+.    ..+++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~~i  100 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD----NEMVM  100 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET----TEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEEEE
Confidence            36899999999999999999998  58999999986544322 2234567777779999999999998876    46899


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC--CCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~--~~~~kl~DfGl  287 (443)
                      |||||++|+|.+++.+  ..+++..+..++.||+.||.|||++        +|+||||||+|||++.  ++.+||+|||+
T Consensus       101 vmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~--------~iiHrDiKp~NIll~~~~~~~vkL~DFG~  172 (350)
T d1koaa2         101 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN--------NYVHLDLKPENIMFTTKRSNELKLIDFGL  172 (350)
T ss_dssp             EECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSTTSCCEEECCCTT
T ss_pred             EEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc--------CCeeeeechhHeeeccCCCCeEEEeecch
Confidence            9999999999999843  5699999999999999999999999        9999999999999964  57899999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+......     ....||+.|||||++.+.      .++.++|||||||++|||++|          ..||.+.   
T Consensus       173 a~~~~~~~~~-----~~~~gT~~Y~aPEv~~~~------~~~~~~DiwSlGvilyell~G----------~~Pf~~~---  228 (350)
T d1koaa2         173 TAHLDPKQSV-----KVTTGTAEFAAPEVAEGK------PVGYYTDMWSVGVLSYILLSG----------LSPFGGE---  228 (350)
T ss_dssp             CEECCTTSCE-----EEECSCTTTCCHHHHHTC------CBCHHHHHHHHHHHHHHHHHS----------SCSSCCS---
T ss_pred             heeccccccc-----ceecCcccccCHHHHcCC------CCChhHhhhhhhHHHHHHHhC----------CCCCCCC---
Confidence            9876543222     335799999999999876      677899999999999999999          7787653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ...+....+......  .+.. ....+++++.+||.+||+.||++|||+.|+++
T Consensus       229 --~~~~~~~~i~~~~~~--~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         229 --NDDETLRNVKSCDWN--MDDS-AFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             --SHHHHHHHHHHTCCC--SCCG-GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHhCCCC--CCcc-cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              223333332222211  1111 11345678999999999999999999999987

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=390.44  Aligned_cols=250  Identities=19%  Similarity=0.263  Sum_probs=199.9

Q ss_pred             hhhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-------cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-------ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .+.++|++.+.||+|+||+||+|++  +|+.||||++.....       .....+.|+..+..++|||||++++++.+. 
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-   85 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-   85 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-
Confidence            3557899999999999999999998  589999999864321       122335666667779999999999999876 


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC----
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG----  278 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~----  278 (443)
                         ..+++|||||++|+|.+++.+ ..+++..+..++.|++.||+|||+.        +|+||||||+|||++.++    
T Consensus        86 ---~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~--------~ivHrDiKp~Nill~~~~~~~~  154 (293)
T d1jksa_          86 ---TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL--------QIAHFDLKPENIMLLDRNVPKP  154 (293)
T ss_dssp             ---SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESCSSSSSC
T ss_pred             ---CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc--------ceeecccccceEEEecCCCccc
Confidence               468999999999999999964 6799999999999999999999999        999999999999998876    


Q ss_pred             cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccC
Q psy14889        279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYK  358 (443)
Q Consensus       279 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~  358 (443)
                      .+||+|||+|+.......     .....||+.|+|||++.+.      .++.++|||||||++|||++|          .
T Consensus       155 ~vkl~DfG~a~~~~~~~~-----~~~~~~t~~y~APE~~~~~------~~~~~~DiwSlGvilyell~g----------~  213 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGNE-----FKNIFGTPEFVAPEIVNYE------PLGLEADMWSIGVITYILLSG----------A  213 (293)
T ss_dssp             CEEECCCTTCEECTTSCB-----CSCCCCCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------S
T ss_pred             ceEecchhhhhhcCCCcc-----ccccCCCCcccCHHHHcCC------CCCCcccchhhhHHHHHHHcC----------C
Confidence            599999999987654322     2345789999999999876      677899999999999999999          7


Q ss_pred             CCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       359 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .||.+.     ...+....+...  ....+.. ....++.++.+||++||+.||++|||++|+++
T Consensus       214 ~Pf~~~-----~~~~~~~~i~~~--~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         214 SPFLGD-----TKQETLANVSAV--NYEFEDE-YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CSSCCS-----SHHHHHHHHHTT--CCCCCHH-HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCCCC-----CHHHHHHHHHhc--CCCCCch-hcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            787653     222332222211  1111110 01235678999999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-51  Score=389.11  Aligned_cols=258  Identities=23%  Similarity=0.353  Sum_probs=202.7

Q ss_pred             cccceeeeecCeEEEEEEEC---C--ceeEEEEeeccCcc--chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        139 SLSECIGKGRYGEVWRGVWH---G--ENVAVKIFFSRDEA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       139 ~~~~~lG~G~fg~Vy~~~~~---~--~~vAvK~~~~~~~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .+.++||+|+||+||+|.+.   +  ..||||++......  ......|+..+.+++|||||+++|++...+   ..+++
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~---~~~~l  106 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE---GSPLV  106 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETT---TEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecC---CceEE
Confidence            44688999999999999982   2  25899988643222  223356667777799999999999987654   35799


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      |||||++|+|.+++..  ..+++..++.++.|+|.||.|||+.        +|+||||||+|||+++++.+||+|||+++
T Consensus       107 v~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~--------~iiHrDLK~~NILl~~~~~~kL~DFG~~~  178 (311)
T d1r0pa_         107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK--------KFVHRDLAARNCMLDEKFTVKVADFGLAR  178 (311)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCSGGGEEECTTCCEEECSSGGGC
T ss_pred             EEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc--------CcccCCccHHhEeECCCCCEEEecccchh
Confidence            9999999999999865  3577889999999999999999998        99999999999999999999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      .................||+.|+|||.+...      .++.++||||||+++|||+||          ..||.....   
T Consensus       179 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~ksDI~SfGivl~El~t~----------~~p~~~~~~---  239 (311)
T d1r0pa_         179 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQ------KFTTKSDVWSFGVLLWELMTR----------GAPPYPDVN---  239 (311)
T ss_dssp             CTTTTTCCCTTCTTCSSCCGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHHTT----------SCCSCC------
T ss_pred             hccccccccceecccccccccccChHHHhcC------CCCChhHhhhhHHHHHHHHHC----------CCCCCCCCC---
Confidence            7765444333334456799999999999876      778999999999999999998          455544321   


Q ss_pred             ChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhccc
Q psy14889        370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACADM  433 (443)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~~  433 (443)
                       ..++...+. ...++..|     ..+++++.+||.+||+.||++|||+.||++.|+++.+...
T Consensus       240 -~~~~~~~i~-~g~~~~~p-----~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         240 -TFDITVYLL-QGRRLLQP-----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             ----CHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             -HHHHHHHHH-cCCCCCCc-----ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence             112222222 23444444     3366789999999999999999999999999999987643

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.2e-51  Score=382.03  Aligned_cols=253  Identities=23%  Similarity=0.300  Sum_probs=203.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc----------hHHHHHHHHHHhcc-CCCceeeeeecccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS----------WSRETEIYSTVLLR-HENILGYIGSDMTS  202 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~----------~~~e~ei~~~~~l~-H~nIv~l~g~~~~~  202 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++.......          .....|+..+..++ ||||+++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6899999999999999999998  68999999986543211          11235666676786 99999999999876


Q ss_pred             CCcccEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                          ..+||||||+++|||.++++ +..+++.++..++.||+.||+|||++        +|+||||||+|||++.++.+|
T Consensus        83 ----~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--------~ivHrDlkp~Nill~~~~~~k  150 (277)
T d1phka_          83 ----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL--------NIVHRDLKPENILLDDDMNIK  150 (277)
T ss_dssp             ----SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEECTTCCEE
T ss_pred             ----cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCcccccccceEEEcCCCCeE
Confidence                46899999999999999995 46899999999999999999999998        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+++.+.....     .....||+.|+|||.+.+........++.++||||+||++|||++|          +.||
T Consensus       151 l~DFG~a~~~~~~~~-----~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g----------~~Pf  215 (277)
T d1phka_         151 LTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG----------SPPF  215 (277)
T ss_dssp             ECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS----------SCSS
T ss_pred             EccchheeEccCCCc-----eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC----------CCCC
Confidence            999999987764322     2345799999999999865433333577899999999999999999          7788


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+.     ........+.........+.   ...+++++++|+.+||+.||++|||++||++
T Consensus       216 ~~~-----~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         216 WHR-----KQMLMLRMIMSGNYQFGSPE---WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CCS-----SHHHHHHHHHHTCCCCCTTT---GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCC-----CHHHHHHHHHhCCCCCCCcc---cccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            763     22333333333222222221   2357788999999999999999999999865

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=390.37  Aligned_cols=244  Identities=23%  Similarity=0.338  Sum_probs=201.6

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|+.  +|+.||||++....    ........|+..+..++||||+++++++.+.    ..+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----~~~   80 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----DRL   80 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS----SEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc----ccc
Confidence            6899999999999999999997  68999999986432    1222234566666779999999999999887    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||||+++|+|.+++.+ ..+++..+..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|
T Consensus        81 ~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~--------~iiHRDlKP~NILl~~~g~vkl~DFG~a  152 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--------DVVYRDIKLENLMLDKDGHIKITDFGLC  152 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc--------CccccccCHHHeEecCCCCEEEeecccc
Confidence            999999999999999975 6799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +........    ....+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.+.    
T Consensus       153 ~~~~~~~~~----~~~~~GT~~Y~aPE~~~~~------~y~~~~DiwSlGvilyeml~G----------~~pf~~~----  208 (337)
T d1o6la_         153 KEGISDGAT----MKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCG----------RLPFYNQ----  208 (337)
T ss_dssp             BCSCCTTCC----BCCCEECGGGCCGGGGSSS------CBCTTHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             cccccCCcc----cccceeCHHHhhhhhccCC------CCChhhcccchhhHHHHHHHC----------CCCCCCc----
Confidence            866543222    2456899999999999887      778999999999999999999          7777663    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                       +...+.+.+...  .+.+|     ..+++++.+||.+||+.||++||+     +.|+++
T Consensus       209 -~~~~~~~~i~~~--~~~~p-----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         209 -DHERLFELILME--EIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CHHHHHHHHhcC--CCCCC-----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence             334444444332  23344     336678999999999999999995     888876

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=389.82  Aligned_cols=255  Identities=24%  Similarity=0.411  Sum_probs=202.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCc--eeEEEEeeccCc--cchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGE--NVAVKIFFSRDE--ASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~--~vAvK~~~~~~~--~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~  208 (443)
                      ++|++.+.||+|+||+||+|.+  +|.  .||||++.....  .......|+..+..+ +|||||+++|++.+.    ..
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~----~~   85 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----GY   85 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET----TE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecC----Ce
Confidence            6899999999999999999998  344  477887754322  222334566666667 799999999999876    46


Q ss_pred             EEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCC
Q psy14889        209 LWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKN  271 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~N  271 (443)
                      +++||||+++|+|.++++.                 ..+++..++.++.|||.||.|||+.        +|+||||||+|
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~--------~iiHrDlkp~N  157 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--------QFIHRDLAARN  157 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGG
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC--------Cccccccccce
Confidence            8999999999999999853                 4689999999999999999999999        99999999999


Q ss_pred             EEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCC
Q psy14889        272 ILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN  351 (443)
Q Consensus       272 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~  351 (443)
                      ||++.++.+||+|||+|+........     ....||..|+|||.+.++      .++.++|||||||++|||++|.   
T Consensus       158 IL~~~~~~~kl~DfG~a~~~~~~~~~-----~~~~gt~~y~aPE~l~~~------~~~~~sDvwSfGvil~ell~~~---  223 (309)
T d1fvra_         158 ILVGENYVAKIADFGLSRGQEVYVKK-----TMGRLPVRWMAIESLNYS------VYTTNSDVWSYGVLLWEIVSLG---  223 (309)
T ss_dssp             EEECGGGCEEECCTTCEESSCEECCC---------CCTTTCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTS---
T ss_pred             EEEcCCCceEEccccccccccccccc-----cceecCCcccchHHhccC------CCCccceeehhHHHHHHHHhcC---
Confidence            99999999999999999765543222     234689999999999876      6778999999999999999972   


Q ss_pred             CcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhc
Q psy14889        352 GIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA  431 (443)
Q Consensus       352 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~  431 (443)
                            ..||.+.     ...++...+.. ..++..+     ..+++++.+||.+||+.||++|||+.||++.|+++.+.
T Consensus       224 ------~~p~~~~-----~~~~~~~~i~~-~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         224 ------GTPYCGM-----TCAELYEKLPQ-GYRLEKP-----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             ------CCTTTTC-----CHHHHHHHGGG-TCCCCCC-----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ------CCCCCCC-----CHHHHHHHHHh-cCCCCCC-----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                  3456543     33444444432 3444444     34678899999999999999999999999999999876


Q ss_pred             cc
Q psy14889        432 DM  433 (443)
Q Consensus       432 ~~  433 (443)
                      ..
T Consensus       287 ~~  288 (309)
T d1fvra_         287 RK  288 (309)
T ss_dssp             SS
T ss_pred             Cc
Confidence            54

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.2e-51  Score=395.06  Aligned_cols=248  Identities=19%  Similarity=0.271  Sum_probs=200.3

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc-chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~-~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|++.+.||+|+||.||+|+.  +|+.||||++...... ....+.|+..+..++|||||++++++.+.    ..+|+
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~~~i  103 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK----YEMVL  103 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS----SEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEEEE
Confidence            36799999999999999999998  5899999998664432 23335677777779999999999999876    46899


Q ss_pred             eecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEc--CCCcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK--TNGTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~--~~~~~kl~DfGl  287 (443)
                      |||||++|+|.+++..  ..+++.++..++.||+.||.|||+.        +|+||||||+|||++  .++.+||+|||+
T Consensus       104 vmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~--------~iiHRDiKp~NILl~~~~~~~vkL~DFGl  175 (352)
T d1koba_         104 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--------SIVHLDIKPENIMCETKKASSVKIIDFGL  175 (352)
T ss_dssp             EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred             EEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CeeecccccccccccccCCCeEEEeeccc
Confidence            9999999999998754  3699999999999999999999998        999999999999998  568999999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      |+.+......     ....||+.|+|||++.+.      .++.++|||||||++|||+||          ..||.+.   
T Consensus       176 a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvilyelltG----------~~Pf~~~---  231 (352)
T d1koba_         176 ATKLNPDEIV-----KVTTATAEFAAPEIVDRE------PVGFYTDMWAIGVLGYVLLSG----------LSPFAGE---  231 (352)
T ss_dssp             CEECCTTSCE-----EEECSSGGGCCHHHHTTC------CBCHHHHHHHHHHHHHHHHHS----------CCSSCCS---
T ss_pred             ceecCCCCce-----eeccCcccccCHHHHcCC------CCCCccchHHHHHHHHHHHhC----------CCCCCCC---
Confidence            9877543221     234789999999999876      677899999999999999999          7788653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ........+....  ..++.. ....++.++.+||.+||+.||.+|||+.|+++
T Consensus       232 --~~~~~~~~i~~~~--~~~~~~-~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         232 --DDLETLQNVKRCD--WEFDED-AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             --SHHHHHHHHHHCC--CCCCSS-TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             --CHHHHHHHHHhCC--CCCCcc-cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              2223322222211  112211 11346678999999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-51  Score=387.59  Aligned_cols=256  Identities=23%  Similarity=0.430  Sum_probs=200.4

Q ss_pred             hccccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccc--hHHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEAS--WSRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      .++|.+.+.||+|+||.||+|++.         +..||||++.......  .....|...+..+ +|||||++++++.+.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            478999999999999999999863         2369999986543322  2222344444445 899999999999876


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-----------------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEe
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-----------------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR  265 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHr  265 (443)
                      .    .+++||||+++|+|.+++..                 ..+++.+++.++.||+.||+|||+.        +||||
T Consensus        92 ~----~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~--------~ivHr  159 (299)
T d1fgka_          92 G----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHR  159 (299)
T ss_dssp             S----SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCS
T ss_pred             C----eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC--------CEEee
Confidence            3    47999999999999999953                 2489999999999999999999999        99999


Q ss_pred             CCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHH
Q psy14889        266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC  345 (443)
Q Consensus       266 Dlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~ell  345 (443)
                      ||||+|||++.++.+||+|||+++.........  ......||+.|+|||.+.++      .++.++|||||||++|||+
T Consensus       160 DiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~------~y~~k~DiwS~Gvvl~ell  231 (299)
T d1fgka_         160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYK--KTTNGRLPVKWMAPEALFDR------IYTHQSDVWSFGVLLWEIF  231 (299)
T ss_dssp             CCSGGGEEECTTCCEEECSTTCCCCGGGCCTTC--CCTTSCCGGGGSCHHHHHHC------CCCHHHHHHHHHHHHHHHH
T ss_pred             eecccceeecCCCCeEeccchhhcccccccccc--ccccCCCChhhhhhhHhcCC------CCCchhhhHHhHHHHHHhc
Confidence            999999999999999999999998776543322  22445789999999999876      7789999999999999999


Q ss_pred             hcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHH
Q psy14889        346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTL  425 (443)
Q Consensus       346 tg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L  425 (443)
                      +++         ..||.+.     ....+...+. ...++..|.     .+++++.+||.+||+.||++|||+.||++.|
T Consensus       232 ~~g---------~~p~~~~-----~~~~~~~~i~-~~~~~~~p~-----~~~~~l~~li~~cl~~dP~~Rps~~eil~~L  291 (299)
T d1fgka_         232 TLG---------GSPYPGV-----PVEELFKLLK-EGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  291 (299)
T ss_dssp             TTS---------CCSSTTC-----CHHHHHHHHH-TTCCCCCCS-----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCC---------CCCCCCC-----CHHHHHHHHH-cCCCCCCCc-----cchHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence            841         5666553     3344444443 344454443     3667899999999999999999999999999


Q ss_pred             HHHhh
Q psy14889        426 IKLAC  430 (443)
Q Consensus       426 ~~l~~  430 (443)
                      +++.+
T Consensus       292 ~~i~a  296 (299)
T d1fgka_         292 DRIVA  296 (299)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            99865

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.1e-50  Score=384.86  Aligned_cols=241  Identities=21%  Similarity=0.324  Sum_probs=197.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++....    ........|+..+..++|||||++++++.+.    ..+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~   79 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA----QQI   79 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS----SEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC----Cee
Confidence            5799999999999999999998  58999999986432    1222334566666679999999999999876    468


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      |+||||+++|+|..++.. ..+++..+..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|
T Consensus        80 ~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--------~iiHrDiKp~NILl~~~g~vkL~DFG~a  151 (316)
T d1fota_          80 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK--------DIIYRDLKPENILLDKNGHIKITDFGFA  151 (316)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccC--------cEEccccCchheeEcCCCCEEEecCccc
Confidence            999999999999998864 5689999999999999999999998        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +......       ....||+.|||||++.+.      .++.++|||||||++|||+||          ..||.+.    
T Consensus       152 ~~~~~~~-------~~~~Gt~~Y~APE~l~~~------~y~~~~DiwSlGvilyemltG----------~~Pf~~~----  204 (316)
T d1fota_         152 KYVPDVT-------YTLCGTPDYIAPEVVSTK------PYNKSIDWWSFGILIYEMLAG----------YTPFYDS----  204 (316)
T ss_dssp             EECSSCB-------CCCCSCTTTCCHHHHTTC------CBCTTHHHHHHHHHHHHHHHS----------SCTTCCS----
T ss_pred             eEecccc-------ccccCcccccCHHHHcCC------CCCchhhccccchhHHHHHhC----------CCCCCCc----
Confidence            8765422       345899999999999876      677899999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                       ...++...+...  ...+|     ...++++.+++.+||+.||.+|+     |++++++
T Consensus       205 -~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         205 -NTMKTYEKILNA--ELRFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CHHHHHHHHHcC--CCCCC-----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence             223333333222  22233     23557899999999999999996     8999876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-50  Score=386.63  Aligned_cols=260  Identities=23%  Similarity=0.403  Sum_probs=205.6

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccch--HHHHHHHHHHhc-cCCCceeeeeecccc
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEASW--SRETEIYSTVLL-RHENILGYIGSDMTS  202 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~~--~~e~ei~~~~~l-~H~nIv~l~g~~~~~  202 (443)
                      ...++|++.++||+|+||.||+|++.       ++.||||++........  ....|+..+..+ +|||||+++|++.+.
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            34589999999999999999999862       45899999865433221  223455555556 799999999999877


Q ss_pred             CCcccEEEeeecccCcccHHHHhccc-------------------CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeE
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNRT-------------------TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIA  263 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~~-------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~ii  263 (443)
                      .    .+++|||||++|+|.++++..                   .+++..++.++.||+.||+|||++        +|+
T Consensus       100 ~----~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~--------~iv  167 (311)
T d1t46a_         100 G----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK--------NCI  167 (311)
T ss_dssp             S----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--------TCC
T ss_pred             C----EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--------Cee
Confidence            4    369999999999999998542                   489999999999999999999999        999


Q ss_pred             EeCCCCCCEEEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHH
Q psy14889        264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE  343 (443)
Q Consensus       264 HrDlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~e  343 (443)
                      ||||||+|||++.++.+||+|||+++.........  ......||+.|+|||.+.+.      .++.++|||||||++||
T Consensus       168 HrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DIwS~G~~l~e  239 (311)
T d1t46a_         168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMAPESIFNC------VYTFESDVWSYGIFLWE  239 (311)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSE--ECSSSEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccCcccccccchheeccCCCcce--EeeecccChHHcCHHHhcCC------CCCCcccccchHHHHHH
Confidence            99999999999999999999999998766433222  22446899999999999876      67789999999999999


Q ss_pred             HHhcccCCCcccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       344 lltg~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |+|++         ..||...    ...+.+.+.+. ...++..+     ..+++.+.+||.+||+.||++|||+.||++
T Consensus       240 llt~g---------~p~~~~~----~~~~~~~~~i~-~~~~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         240 LFSLG---------SSPYPGM----PVDSKFYKMIK-EGFRMLSP-----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHTTT---------CCSSTTC----CSSHHHHHHHH-HTCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCC---------CCCCCCC----CHHHHHHHHHh-cCCCCCCc-----ccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99962         3334332    12234444443 23444444     235678999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy14889        424 TLIKLACA  431 (443)
Q Consensus       424 ~L~~l~~~  431 (443)
                      .|+++..+
T Consensus       301 ~L~~~i~~  308 (311)
T d1t46a_         301 LIEKQISE  308 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhhcc
Confidence            99987654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-50  Score=390.69  Aligned_cols=253  Identities=19%  Similarity=0.268  Sum_probs=193.2

Q ss_pred             hccccccc-eeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        135 AKQISLSE-CIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       135 ~~~~~~~~-~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      .++|.+.+ .||+|+||+||+|++  +++.||||++...  ....+|.++... ..+|||||++++++.+.......+|+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~~~~E~~~~~~-~~~hpnIv~l~~~~~~~~~~~~~~~i   86 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELHWR-ASQCPHIVRIVDVYENLYAGRKCLLI   86 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHHHH-HTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--HHHHHHHHHHHH-hcCCCCCCeEEEEEeecccCCCEEEE
Confidence            36898765 699999999999997  5899999998542  233445444332 25899999999998764433367899


Q ss_pred             eecccCcccHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CCcEEEEec
Q psy14889        212 VTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADF  285 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~~~kl~Df  285 (443)
                      |||||++|+|.+++.+   ..+++.++..++.||+.||+|||+.        +|+||||||+|||++.   ++.+||+||
T Consensus        87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~--------~iiHRDiKp~NIll~~~~~~~~~Kl~DF  158 (335)
T d2ozaa1          87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--------NIAHRDVKPENLLYTSKRPNAILKLTDF  158 (335)
T ss_dssp             EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc--------CCcccccccccccccccccccccccccc
Confidence            9999999999999965   3699999999999999999999999        9999999999999986   457999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|+.......     .....||+.|||||++.+.      .++.++|||||||++|||+||          ..||.+..
T Consensus       159 G~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~y~~~~DiwSlGvily~lltg----------~~Pf~~~~  217 (335)
T d2ozaa1         159 GFAKETTSHNS-----LTTPCYTPYYVAPEVLGPE------KYDKSCDMWSLGVIMYILLCG----------YPPFYSNH  217 (335)
T ss_dssp             TTCEECCCCCC-----CCCCSCCCSSCCCCCCCGG------GGSHHHHHHHHHHHHHHHTTS----------SCSCEETT
T ss_pred             ceeeeccCCCc-----cccccCCcccCCcHHHcCC------CCCHHHHHHhhchhHHHHhhC----------CCCCCCCC
Confidence            99987654322     2345799999999999876      677899999999999999999          66776532


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .... ...+...+.  .....+|.. ....+++++.+||.+||+.||++|||+.|+++
T Consensus       218 ~~~~-~~~~~~~i~--~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         218 GLAI-SPGMKTRIR--MGQYEFPNP-EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             CC---------CCC--SCSSSCCTT-HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHH-HHHHHHHHh--cCCCCCCCc-ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            2111 111111111  111122211 11235678999999999999999999999987

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-50  Score=387.62  Aligned_cols=249  Identities=19%  Similarity=0.264  Sum_probs=200.7

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      +-++|++.+.||+|+||+||+|.+  +|+.||||++..........+.|+..+..++|||||++++++.+.    ..+||
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~~~l   78 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM----EELVM   78 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET----TEEEE
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----CEEEE
Confidence            347899999999999999999998  588999999977655544555677777779999999999999876    46899


Q ss_pred             eecccCcccHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC--CcEEEEecCC
Q psy14889        212 VTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN--GTCVIADFGL  287 (443)
Q Consensus       212 v~e~~~~gsL~~~l~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~--~~~kl~DfGl  287 (443)
                      |||||++|+|.+++...  .+++.++..++.||+.||+|||+.        +|+||||||+|||++.+  ..+||+|||+
T Consensus        79 vmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~--------~iiHrDlKp~NIll~~~~~~~ikl~DFG~  150 (321)
T d1tkia_          79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH--------NIGHFDIRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred             EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCCcccccccceeecCCCceEEEEcccch
Confidence            99999999999999653  689999999999999999999998        99999999999999854  4899999999


Q ss_pred             cccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCC
Q psy14889        288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM  367 (443)
Q Consensus       288 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~  367 (443)
                      ++........     ....||+.|+|||.+.+.      .++.++|||||||++|||++|          ..||...   
T Consensus       151 ~~~~~~~~~~-----~~~~~t~~y~ape~~~~~------~~~~~~DiWSlGvily~ll~G----------~~Pf~~~---  206 (321)
T d1tkia_         151 ARQLKPGDNF-----RLLFTAPEYYAPEVHQHD------VVSTATDMWSLGTLVYVLLSG----------INPFLAE---  206 (321)
T ss_dssp             CEECCTTCEE-----EEEESCGGGSCHHHHTTC------EECHHHHHHHHHHHHHHHHHS----------SCTTCCS---
T ss_pred             hhccccCCcc-----cccccccccccchhccCC------CCCchhhcccHHHHHHHHHhC----------CCCCCCC---
Confidence            9776432211     234789999999998876      667899999999999999999          7787653   


Q ss_pred             CCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                        ....+...+....  ..++... ...+++++.+|+.+||..||++|||+.|+++
T Consensus       207 --~~~~~~~~i~~~~--~~~~~~~-~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         207 --TNQQIIENIMNAE--YTFDEEA-FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --SHHHHHHHHHHTC--CCCCHHH-HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHhCC--CCCChhh-ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              2233333322221  1122100 0135678999999999999999999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-50  Score=384.15  Aligned_cols=243  Identities=23%  Similarity=0.386  Sum_probs=197.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----cc--chHHHHHHHHHHhccCCCceeeeeeccccCCccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EA--SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCT  207 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~--~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~  207 (443)
                      ++|.+.+.||+|+||+||+|++  +|+.||||++....    ..  ....|..+.. ..++|||||++++++.+.    .
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~-~~~~hp~Iv~~~~~~~~~----~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAWEHPFLTHMFCTFQTK----E   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHH-HHTTCTTBCCEEEEEECS----S
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHH-HhCCCCcEEEEEEEEccC----C
Confidence            5799999999999999999998  68999999986431    11  2222333322 248999999999999887    4


Q ss_pred             EEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        208 QLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       208 ~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      .+|+||||+++|+|.+++.. ..+++.++..++.||+.||+|||++        +|+||||||+|||+++++.+||+|||
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~--------~iiHrDikp~NiL~~~~~~~kl~DFG  148 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--------GIVYRDLKLDNILLDKDGHIKIADFG  148 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--------TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             ceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCcccceeecCCCceeccccc
Confidence            58999999999999999964 6799999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++........    .....||+.|+|||++.+.      .++.++|||||||++|||+||          ..||.+.  
T Consensus       149 ~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvilyemltG----------~~PF~~~--  206 (320)
T d1xjda_         149 MCKENMLGDAK----TNTFCGTPDYIAPEILLGQ------KYNHSVDWWSFGVLLYEMLIG----------QSPFHGQ--  206 (320)
T ss_dssp             TCBCCCCTTCC----BCCCCSCGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCS--
T ss_pred             hhhhccccccc----ccccCCCCCcCCHHHHcCC------CCCchhhhhhhhHHHHHHHhC----------CCCCCCC--
Confidence            99865543222    2345799999999999887      777899999999999999999          7788653  


Q ss_pred             CCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHH-HHHH
Q psy14889        367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL-RVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~  423 (443)
                         ....+...+..  ..+.+|     ..+++++.+|+.+||+.||++|||+. ++++
T Consensus       207 ---~~~~~~~~i~~--~~~~~p-----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         207 ---DEEELFHSIRM--DNPFYP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             ---SHHHHHHHHHH--CCCCCC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ---CHHHHHHHHHc--CCCCCC-----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence               33444443332  234444     23567899999999999999999985 6753

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-50  Score=385.52  Aligned_cols=260  Identities=21%  Similarity=0.367  Sum_probs=208.6

Q ss_pred             hhhccccccceeeeecCeEEEEEEEC-------CceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        133 TLAKQISLSECIGKGRYGEVWRGVWH-------GENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       133 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      ...++|++.+.||+|+||+||+|.+.       ++.||||++.......  .....|+..+..++|||||+++|++....
T Consensus        17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~   96 (308)
T d1p4oa_          17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   96 (308)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC
Confidence            33478999999999999999999874       4689999986543222  22346777777799999999999997764


Q ss_pred             CcccEEEeeecccCcccHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCE
Q psy14889        204 NSCTQLWLVTHYHSFGSLYDHLNR-----------TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI  272 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~gsL~~~l~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~Ni  272 (443)
                          ..++||||+++|+|.+++..           ..+++..+..++.|+|+||.|||++        +|+||||||+||
T Consensus        97 ----~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~--------~ivHrDlk~~Ni  164 (308)
T d1p4oa_          97 ----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--------KFVHRDLAARNC  164 (308)
T ss_dssp             ----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT--------TCBCSCCSGGGE
T ss_pred             ----ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC--------CeeeceEcCCce
Confidence                36999999999999999853           2478999999999999999999998        999999999999


Q ss_pred             EEcCCCcEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC
Q psy14889        273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG  352 (443)
Q Consensus       273 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~  352 (443)
                      |++.++++||+|||+|+.+.......  ......||+.|+|||.+.+.      .++.++||||||+++|||+||+    
T Consensus       165 Lld~~~~~Kl~DFGla~~~~~~~~~~--~~~~~~~t~~y~aPe~l~~~------~~~~~~Dv~S~G~il~El~t~~----  232 (308)
T d1p4oa_         165 MVAEDFTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDG------VFTTYSDVWSFGVVLWEIATLA----  232 (308)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEE--GGGSSEECGGGCCHHHHHHC------CCCHHHHHHHHHHHHHHHHHTS----
T ss_pred             eecCCceEEEeecccceeccCCccee--eccceecccccCCHHHHccC------CCCcccccccHHHHHHHHHhCC----
Confidence            99999999999999998765543221  12334789999999999877      6778999999999999999983    


Q ss_pred             cccccCCCCCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                           ..||.+.     ...+....+. ...++..|     ..++..+.+||.+||+.||++|||+.+|++.|++..+..
T Consensus       233 -----~~p~~~~-----~~~~~~~~i~-~~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~  296 (308)
T d1p4oa_         233 -----EQPYQGL-----SNEQVLRFVM-EGGLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  296 (308)
T ss_dssp             -----CCTTTTS-----CHHHHHHHHH-TTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             -----CCCCCCC-----CHHHHHHHHH-hCCCCCCc-----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence                 3566553     3344444333 23344443     346678999999999999999999999999999876654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9.2e-50  Score=388.74  Aligned_cols=246  Identities=26%  Similarity=0.384  Sum_probs=194.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC------ccchHHH-HHHHHHHhccCCCceeeeeeccccCCcc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD------EASWSRE-TEIYSTVLLRHENILGYIGSDMTSRNSC  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~------~~~~~~e-~ei~~~~~l~H~nIv~l~g~~~~~~~~~  206 (443)
                      ++|++.+.||+|+||.||+|++  +|+.||||++....      ......| .++..+..++|||||++++++.+.    
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~----   79 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP----   79 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS----
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC----
Confidence            5799999999999999999998  58999999985422      1122223 234444557899999999999876    


Q ss_pred             cEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+|+||||+++|+|.+++.+ ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        80 ~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~--------~iiHrDlKP~NILl~~~g~iKl~DF  151 (364)
T d1omwa3          80 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR--------FVVYRDLKPANILLDEHGHVRISDL  151 (364)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECSSSCEEECCC
T ss_pred             CEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC--------CccceeeccceeEEcCCCcEEEeee
Confidence            458999999999999999964 6789999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+|+.+....      .....||+.|+|||++..+.     .++.++|||||||++|||+||          ..||....
T Consensus       152 Gla~~~~~~~------~~~~~GT~~y~APE~~~~~~-----~~~~~~DiwSlGvilyemltG----------~~Pf~~~~  210 (364)
T d1omwa3         152 GLACDFSKKK------PHASVGTHGYMAPEVLQKGV-----AYDSSADWFSLGCMLFKLLRG----------HSPFRQHK  210 (364)
T ss_dssp             TTCEECSSSC------CCSCCSCGGGCCHHHHSTTC-----CCCTHHHHHHHHHHHHHHHHS----------SCSSCSSC
T ss_pred             ceeeecCCCc------ccccccccccchhHHhhcCC-----CCCcccchhHHHHHHHHHHhC----------CCCCCCCC
Confidence            9998765422      23457999999999997542     567899999999999999999          77776542


Q ss_pred             CCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                      ..  ....+....  ....+..+     ..+++++.+||.+||+.||++|||     ++|+++
T Consensus       211 ~~--~~~~~~~~~--~~~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         211 TK--DKHEIDRMT--LTMAVELP-----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SS--CHHHHHHHS--SSCCCCCC-----SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HH--HHHHHHHhc--ccCCCCCC-----CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11  122222211  12222222     346678999999999999999999     688875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-49  Score=385.99  Aligned_cols=241  Identities=20%  Similarity=0.287  Sum_probs=198.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC----ccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD----EASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQL  209 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~----~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~  209 (443)
                      ++|++.+.||+|+||.||+|++  +|+.||||++....    ........|+..+..++|||||++++++.+.    ..+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~  116 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN----SNL  116 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc----ccc
Confidence            6899999999999999999998  58999999986432    1122234566667779999999999998876    458


Q ss_pred             EeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        210 WLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       210 ~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ++||||+.+|+|.+++.+ ..+++..+..++.||+.||.|||++        +||||||||+|||++.++.+||+|||+|
T Consensus       117 ~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~--------~iiHRDIKP~NILl~~~g~ikL~DFG~a  188 (350)
T d1rdqe_         117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--------DLIYRDLKPENLLIDQQGYIQVTDFGFA  188 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CEecCcCCHHHcccCCCCCEEeeeceee
Confidence            999999999999999864 6799999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.+....       ....||+.|||||++.+.      .++.++|||||||++|||+||          ..||.+.    
T Consensus       189 ~~~~~~~-------~~~~Gt~~Y~APE~~~~~------~~~~~~DiwSlGvilyemltG----------~~Pf~~~----  241 (350)
T d1rdqe_         189 KRVKGRT-------WTLCGTPEALAPEIILSK------GYNKAVDWWALGVLIYEMAAG----------YPPFFAD----  241 (350)
T ss_dssp             EECSSCB-------CCCEECGGGCCHHHHTTC------CBCTHHHHHHHHHHHHHHHHS----------SCSSCCS----
T ss_pred             eeccccc-------ccccCccccCCHHHHcCC------CCCccccccchhHHHHHHHhC----------CCCCCCc----
Confidence            8765322       345899999999999876      677899999999999999999          7788653    


Q ss_pred             CChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCC-----cHHHHHH
Q psy14889        369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRL-----SALRVKK  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~  423 (443)
                       ....+...+...  .+..+     ..+++++.+|+++||+.||.+|+     |++++++
T Consensus       242 -~~~~~~~~i~~~--~~~~p-----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         242 -QPIQIYEKIVSG--KVRFP-----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -SHHHHHHHHHHC--CCCCC-----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CHHHHHHHHhcC--CCCCC-----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence             223333333222  22333     23567899999999999999994     8999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-49  Score=373.34  Aligned_cols=248  Identities=22%  Similarity=0.276  Sum_probs=186.6

Q ss_pred             cceeeeecCeEEEEEEE--CCceeEEEEeeccCcc------chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA------SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       141 ~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~------~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +++||+|+||+||+|++  +|+.||||++......      ......|+..+..++|||||++++++.+..    .+++|
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~----~~~iv   78 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS----NISLV   78 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT----CCEEE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC----ceeeh
Confidence            57899999999999997  5899999988543221      122345666666799999999999998774    47999


Q ss_pred             ecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~~  291 (443)
                      |||+.++++..+.. +..+++.++..++.||+.||+|||++        +|+||||||+|||++.++.+||+|||+|+..
T Consensus        79 mE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~--------~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~  150 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH--------WILHRDLKPNNLLLDENGVLKLADFGLAKSF  150 (299)
T ss_dssp             EECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             hhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc--------ceecccCCcceEEecCCCccccccCcccccc
Confidence            99999988877775 45799999999999999999999999        9999999999999999999999999999766


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      ......    ....+||+.|+|||++....     .++.++|||||||++|||+||          ..||....    ..
T Consensus       151 ~~~~~~----~~~~~gt~~y~aPE~~~~~~-----~~~~~~DiwSlGvil~el~~g----------~~pf~~~~----~~  207 (299)
T d1ua2a_         151 GSPNRA----YTHQVVTRWYRAPELLFGAR-----MYGVGVDMWAVGCILAELLLR----------VPFLPGDS----DL  207 (299)
T ss_dssp             TSCCCC----CCCSCCCCTTCCHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHS----------SCSSCCSS----HH
T ss_pred             CCCccc----ccceecChhhccHHHHccCC-----CCChhhhhhhcchHHHHHHhC----------cCCCCCCC----HH
Confidence            543222    23457999999999987542     456899999999999999999          55654421    11


Q ss_pred             HHHHhhhhhcCC-----------------CCCCCCC---CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        372 DDMRKVICIDQQ-----------------RPVLPNR---WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       372 ~~~~~~~~~~~~-----------------~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +.+..+......                 ....+..   ......++++.+|+.+||+.||++|||++|+++
T Consensus       208 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         208 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            222221111000                 0000000   001134578999999999999999999999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-49  Score=367.88  Aligned_cols=238  Identities=18%  Similarity=0.304  Sum_probs=188.9

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---------cchHHHHHHHHHHhccCCCceeeeeeccccC
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---------ASWSRETEIYSTVLLRHENILGYIGSDMTSR  203 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---------~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~  203 (443)
                      .++|++.+.||+|+||+||+|++  +|+.||||++.....         ....+|.+++....-.|||||++++++.+. 
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~-   81 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP-   81 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS-
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC-
Confidence            46899999999999999999998  589999999864321         223445555554323499999999999876 


Q ss_pred             CcccEEEeeecccCc-ccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC-CcE
Q psy14889        204 NSCTQLWLVTHYHSF-GSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTC  280 (443)
Q Consensus       204 ~~~~~~~lv~e~~~~-gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~-~~~  280 (443)
                         ..+++||||+.+ +++.+++. +..+++.++..++.||+.||+|||+.        +|+||||||+|||++.+ +.+
T Consensus        82 ---~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~--------~iiHrDiKp~NIll~~~~~~v  150 (273)
T d1xwsa_          82 ---DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC--------GVLHRDIKDENILIDLNRGEL  150 (273)
T ss_dssp             ---SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCSGGGEEEETTTTEE
T ss_pred             ---CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccccCcccceEEecCCCeE
Confidence               457999999975 68888875 46899999999999999999999999        99999999999999854 799


Q ss_pred             EEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        281 VIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       281 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      ||+|||+|+......      .+...||+.|+|||++.+..     .++.++|||||||++|||+||          ..|
T Consensus       151 kl~DFG~a~~~~~~~------~~~~~GT~~y~aPE~~~~~~-----~~~~~~DiwSlGvilyell~g----------~~P  209 (273)
T d1xwsa_         151 KLIDFGSGALLKDTV------YTDFDGTRVYSPPEWIRYHR-----YHGRSAAVWSLGILLYDMVCG----------DIP  209 (273)
T ss_dssp             EECCCTTCEECCSSC------BCCCCSCGGGSCHHHHHHSC-----BCHHHHHHHHHHHHHHHHHHS----------SCS
T ss_pred             EECccccceeccccc------ccccccCCCcCCHHHHcCCC-----CCCcccccccceeeehhHhhC----------CCC
Confidence            999999997654321      23457999999999998652     124678999999999999999          677


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      |...       ..+..      ....++     ..+++++.+|+.+||+.||++|||++|+++
T Consensus       210 f~~~-------~~i~~------~~~~~~-----~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         210 FEHD-------EEIIR------GQVFFR-----QRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             CCSH-------HHHHH------CCCCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCc-------hHHhh------cccCCC-----CCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            7542       11111      111222     235678999999999999999999999976

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=364.36  Aligned_cols=256  Identities=25%  Similarity=0.325  Sum_probs=190.7

Q ss_pred             hccccccceeeeecCeEEEEEEE--C-CceeEEEEeeccC-----ccchHHHHHHHH-HHhccCCCceeeeeeccccC-C
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--H-GENVAVKIFFSRD-----EASWSRETEIYS-TVLLRHENILGYIGSDMTSR-N  204 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~-~~~vAvK~~~~~~-----~~~~~~e~ei~~-~~~l~H~nIv~l~g~~~~~~-~  204 (443)
                      .++|++.+.||+|+||+||+|++  + ++.||||++....     .....+|.+++. +...+||||+++++++.... .
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            36899999999999999999997  2 5679999885432     122334444433 33358999999999986432 2


Q ss_pred             cccEEEeeecccCcccHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEE
Q psy14889        205 SCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI  282 (443)
Q Consensus       205 ~~~~~~lv~e~~~~gsL~~~l--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl  282 (443)
                      ....++++|||+.+|++....  ....+++..+..++.|++.||+|||++        +|+||||||+|||++.++.+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~--------~ivHrDiKp~NILi~~~~~~kl  157 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--------RVVHRDLKPQNILVTSSGQIKL  157 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEEE
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CEEecCCCccEEEEcCCCCeee
Confidence            235689999999988775544  346799999999999999999999999        9999999999999999999999


Q ss_pred             EecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCC
Q psy14889        283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYH  362 (443)
Q Consensus       283 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~  362 (443)
                      +|||+++.......     .....||+.|+|||++.+.      .++.++||||+||++|||+||          ..||.
T Consensus       158 ~dfg~~~~~~~~~~-----~~~~~gT~~Y~APE~~~~~------~y~~~~DiwSlG~il~ell~g----------~~pf~  216 (305)
T d1blxa_         158 ADFGLARIYSFQMA-----LTSVVVTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR----------KPLFR  216 (305)
T ss_dssp             CSCCSCCCCCGGGG-----GCCCCCCCTTCCHHHHTTC------CCCTHHHHHHHHHHHHHHHHS----------SCSCC
T ss_pred             cchhhhhhhccccc-----CCCcccChhhcCcchhcCC------CCChhehhhchHHHHHHHHHC----------CCCCC
Confidence            99999876543322     2345899999999999876      778999999999999999999          56665


Q ss_pred             CCCCCCCChHHHHhhhhhcC-------------------CCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        363 DLVPMDPSFDDMRKVICIDQ-------------------QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      +..    ..+.+........                   .....+........++.+.+|+.+||+.||++|||+.|+++
T Consensus       217 ~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         217 GSS----DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CSS----HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCC----HHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            421    1111111111000                   00000000112335678999999999999999999999876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=365.20  Aligned_cols=254  Identities=25%  Similarity=0.311  Sum_probs=190.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++.....   .......|+..+..++|||||++++++.+.    ..++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~----~~~~   77 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE----NKLY   77 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET----TEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc----ccee
Confidence            5899999999999999999998  589999999854322   123345677777779999999999999876    4689


Q ss_pred             eeecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        211 LVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +||||+.++.+.....  ...+++..+..++.||+.||+|||++        +||||||||+|||++.++.+||+|||+|
T Consensus        78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~--------~IiHrDiKpeNIl~~~~~~~kl~DFG~a  149 (298)
T d1gz8a_          78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--------RVLHRDLKPQNLLINTEGAIKLADFGLA  149 (298)
T ss_dssp             EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECSTTHH
T ss_pred             EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC--------CEEccccCchheeecccCcceeccCCcc
Confidence            9999998654443322  35699999999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +........    .....||+.|+|||.+....     .++.++|||||||++|||++|          ..||....   
T Consensus       150 ~~~~~~~~~----~~~~~gt~~y~apE~~~~~~-----~~~~~~DiwSlGvily~m~~G----------~~Pf~~~~---  207 (298)
T d1gz8a_         150 RAFGVPVRT----YTHEVVTLWYRAPEILLGCK-----YYSTAVDIWSLGCIFAEMVTR----------RALFPGDS---  207 (298)
T ss_dssp             HHHCCCSBC----TTCCBCCCTTCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS---
T ss_pred             eeccCCccc----ceeecccceeeehhhhcccc-----CCCccccccccchhhhHHhhC----------CCCCCCCC---
Confidence            776543222    24458999999999887652     345899999999999999999          55664321   


Q ss_pred             CChHHHHhhhhh---------------cCCCCCCCCCCC------CchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        369 PSFDDMRKVICI---------------DQQRPVLPNRWV------SDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       369 ~~~~~~~~~~~~---------------~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                       ..+.+.+....               .......+....      ....+.++.+|+.+||+.||++|||++|+++.
T Consensus       208 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         208 -EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             -HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -HHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence             11111111100               001111111000      11345678999999999999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1e-47  Score=363.14  Aligned_cols=253  Identities=23%  Similarity=0.271  Sum_probs=191.1

Q ss_pred             ccccccceeeeecCeEEEEEEE-CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~l  211 (443)
                      ++|++.+.||+|+||+||+|++ +|+.||||++......   ......|+..+..++|||||++++++....    ..++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~~i   77 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----RLVL   77 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS----CEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC----ceeE
Confidence            5899999999999999999998 6899999998654322   233456777777799999999999998774    4799


Q ss_pred             eecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        212 VTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       212 v~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ++||+.++++..+.. ...+++.++..++.||+.||+|||+.        +|+||||||+|||++.++.+||+|||+|..
T Consensus        78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~IvHrDiKp~NIll~~~~~~kl~DfG~a~~  149 (286)
T d1ob3a_          78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARA  149 (286)
T ss_dssp             EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred             EEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC--------cEEecCCCCceeeEcCCCCEEeccccccee
Confidence            999999888777765 46799999999999999999999998        999999999999999999999999999977


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      .......    .....|++.|+|||.+.+..     .++.++|||||||++|||++|          ..||.+..    .
T Consensus       150 ~~~~~~~----~~~~~~~~~y~~pE~~~~~~-----~~~~~~DiwslGv~l~el~~G----------~~pf~~~~----~  206 (286)
T d1ob3a_         150 FGIPVRK----YTHEIVTLWYRAPDVLMGSK-----KYSTTIDIWSVGCIFAEMVNG----------TPLFPGVS----E  206 (286)
T ss_dssp             HCC-------------CCCTTCCHHHHTTCC-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS----H
T ss_pred             cccCccc----cceecccchhhhHHHHhCCC-----CCCcceeehhcCcHHHHHHHC----------CCCCCCCC----H
Confidence            6543221    23446899999999987642     456899999999999999999          55554321    1


Q ss_pred             hHHHHhhhhhc---------------------CCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        371 FDDMRKVICID---------------------QQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       371 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      .+.+.+.....                     ......+........++.+.+|+.+||+.||++|||+.|+++
T Consensus       207 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111000                     000001101112335678999999999999999999999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-47  Score=367.77  Aligned_cols=262  Identities=21%  Similarity=0.248  Sum_probs=191.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc--hHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS--WSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~--~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ..+|++.+.||+|+||+||+|..  +|+.||||++.......  .....|+..+..++||||+++++++..........+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            46799999999999999999987  59999999986543221  122346666666999999999999876533222234


Q ss_pred             eeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCccc
Q psy14889        211 LVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS  290 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~~  290 (443)
                      ++++|+.+|+|.+++....+++..+..++.||+.||+|||++        +||||||||+|||++.++.+||+|||+|+.
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~--------~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--------NVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcCCCCCcceEEECCCCCEEEcccCceee
Confidence            455667789999999888999999999999999999999999        999999999999999999999999999987


Q ss_pred             ccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCC
Q psy14889        291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPS  370 (443)
Q Consensus       291 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~  370 (443)
                      ........ .......||+.|+|||++....     .++.++||||+||++|||++|          ..||.....    
T Consensus       159 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~eml~g----------~~pf~~~~~----  218 (345)
T d1pmea_         159 ADPDHDHT-GFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIWSVGCILAEMLSN----------RPIFPGKHY----  218 (345)
T ss_dssp             CCGGGCBC-CTTCCCCSCGGGCCGGGTTTBC-----SCSTHHHHHHHHHHHHHHHHS----------SCSCCCSSH----
T ss_pred             ccCCCccc-eeeccccccceechHHHhhcCC-----CCCchhhhhccCceehHHhhC----------CCCCCCCCH----
Confidence            65433222 1234567999999999986552     456899999999999999999          556644210    


Q ss_pred             hHHHHhhh-----------------------hhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHH
Q psy14889        371 FDDMRKVI-----------------------CIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT  424 (443)
Q Consensus       371 ~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~  424 (443)
                      .+......                       .........+........+.++.+|+.+||+.||++|||+.|+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         219 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00110000                       0000000000000011244679999999999999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-47  Score=359.37  Aligned_cols=261  Identities=19%  Similarity=0.255  Sum_probs=192.9

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc-cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE-ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~-~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++..... .....|.+++  ..++|+|++..++.+....   ...++|
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~--~~l~~~~~i~~~~~~~~~~---~~~~iv   81 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIY--KMMQGGVGIPTIRWCGAEG---DYNVMV   81 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHH--HHSTTSTTCCCEEEEEEET---TEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHH--HHccCCCcccEEEEEEecC---CEEEEE
Confidence            5799999999999999999998  588999998765432 3444455544  4488887776666554433   357899


Q ss_pred             ecccCcccHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC---CCcEEEEecCC
Q psy14889        213 THYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGL  287 (443)
Q Consensus       213 ~e~~~~gsL~~~l~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~---~~~~kl~DfGl  287 (443)
                      |||+. |+|.+.+.  ...+++..+..++.|++.||+|||++        +|+||||||+|||++.   +..+||+|||+
T Consensus        82 me~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~  152 (299)
T d1ckia_          82 MELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK--------NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  152 (299)
T ss_dssp             EECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECSCCCGGGEEECCGGGTTCEEECCCSS
T ss_pred             EEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC--------CeeeccCCHhhccccccCCCceeeeeccCc
Confidence            99996 56666654  46799999999999999999999999        9999999999999854   45799999999


Q ss_pred             cccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCC
Q psy14889        288 AVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL  364 (443)
Q Consensus       288 a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~  364 (443)
                      |+.+........   .......||+.|||||.+.+.      .++.++|||||||++|||+||          ..||...
T Consensus       153 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~~l~el~tg----------~~P~~~~  216 (299)
T d1ckia_         153 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI------EQSRRDDLESLGYVLMYFNLG----------SLPWQGL  216 (299)
T ss_dssp             CEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTB------CCCHHHHHHHHHHHHHHHHHS----------SCTTCCC
T ss_pred             ceeccccccccceeccccCCcCCCccccCHHHHhCC------CCCChhhEEecCHHHHHHHhC----------CCccccc
Confidence            987765332211   122456799999999999876      677999999999999999999          7777664


Q ss_pred             CCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhh
Q psy14889        365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLAC  430 (443)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~  430 (443)
                      ........ ........ .....+  .....+++++.+++.+||+.||++||++.++.+.|+.+..
T Consensus       217 ~~~~~~~~-~~~~~~~~-~~~~~~--~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         217 KAATKRQK-YERISEKK-MSTPIE--VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             C--------HHHHHHHH-HHSCHH--HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             chHHHHHH-HHHhhccc-CCCChh--HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            33221111 11111000 001000  0112366789999999999999999999999999988754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-47  Score=366.01  Aligned_cols=261  Identities=21%  Similarity=0.309  Sum_probs=192.8

Q ss_pred             hhccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCC--cc
Q psy14889        134 LAKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRN--SC  206 (443)
Q Consensus       134 ~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~  206 (443)
                      +.++|++.+.||+|+||+||+|.+  +|+.||||++.......   .....|+..+..++|||||++++++.....  ..
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            558999999999999999999998  58999999986533221   122456666777999999999999876542  22


Q ss_pred             cEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecC
Q psy14889        207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG  286 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfG  286 (443)
                      ..+++||||+ +++|..+.+...+++..+..++.||+.||.|||++        +|+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--------~IiHrDiKp~NIL~~~~~~~kl~Dfg  166 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA--------GIIHRDLKPGNLAVNEDCELKILDFG  166 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC--------CCcccccCcchhhccccccccccccc
Confidence            3579999999 46899888888999999999999999999999999        99999999999999999999999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +|+.....       .+...||+.|+|||.+.+..     .++.++||||+||++|||++|          ..||.+.. 
T Consensus       167 ~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlGvil~ell~g----------~~pf~~~~-  223 (346)
T d1cm8a_         167 LARQADSE-------MTGYVVTRWYRAPEVILNWM-----RYTQTVDIWSVGCIMAEMITG----------KTLFKGSD-  223 (346)
T ss_dssp             TCEECCSS-------CCSSCSCGGGCCTHHHHTTT-----CCCTTHHHHHHHHHHHHHHHS----------SCSSCCSS-
T ss_pred             ceeccCCc-------cccccccccccCHHHHcCCC-----CCCccchhhcchHHHHHHHHC----------cCCCCCCC-
Confidence            99766432       23457999999999987642     456899999999999999999          55664421 


Q ss_pred             CCCChHHHHhhhhhcCC--------------------CCCCCC---CCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        367 MDPSFDDMRKVICIDQQ--------------------RPVLPN---RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~~~~--------------------~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                         ....+.........                    .+....   .......++.+.+|+.+||..||++|||+.|+++
T Consensus       224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         224 ---HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             ---HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---hHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence               11111111100000                    000000   0011234567899999999999999999999987


Q ss_pred             H--HHHHh
Q psy14889        424 T--LIKLA  429 (443)
Q Consensus       424 ~--L~~l~  429 (443)
                      .  ++.+.
T Consensus       301 Hp~f~~~~  308 (346)
T d1cm8a_         301 HPYFESLH  308 (346)
T ss_dssp             SGGGTTTC
T ss_pred             ChhhCcCC
Confidence            4  55544

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-46  Score=357.34  Aligned_cols=261  Identities=22%  Similarity=0.274  Sum_probs=187.7

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCc----c
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNS----C  206 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~----~  206 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||++.....   .......|+..+..++||||+++++++......    .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            7899999999999999999998  589999998754322   122234566666669999999999998654211    1


Q ss_pred             cEEEeeecccCcccHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEec
Q psy14889        207 TQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF  285 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL~~~l~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~Df  285 (443)
                      ..+++||||+.++++..+.. ...+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+||+||
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~--------~ivHrDlKp~NILl~~~~~~kl~df  161 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--------KILHRDMKAANVLITRDGVLKLADF  161 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCCGGGEEECTTSCEEECCC
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC--------CEEecCcCchheeecCCCcEEeeec
Confidence            35799999999877776654 36799999999999999999999999        9999999999999999999999999


Q ss_pred             CCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCC
Q psy14889        286 GLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV  365 (443)
Q Consensus       286 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~  365 (443)
                      |+++.+...............||+.|+|||++.+..     .++.++|||||||++|||++|          +.||.+..
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~-----~~~~k~DiwSlGvil~el~~g----------~~pf~~~~  226 (318)
T d3blha1         162 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER-----DYGPPIDLWGAGCIMAEMWTR----------SPIMQGNT  226 (318)
T ss_dssp             TTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHS----------SCSCCCSS
T ss_pred             ceeeecccccccccccccceecCHHHhhHHHHcCCC-----CCCcHHHcccCCceeeeHhhC----------CCCCCCCC
Confidence            999876654433333344568999999999987642     466899999999999999999          55554321


Q ss_pred             CCCCChHHHHhhhhhcCCC-CCCCCCC------------------C-----CchhHHHHHHHHHHHhcCCcCCCCcHHHH
Q psy14889        366 PMDPSFDDMRKVICIDQQR-PVLPNRW------------------V-----SDSTLNAMTKVMKECWHQNANVRLSALRV  421 (443)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ev  421 (443)
                          ............... +......                  .     .......+.+||.+||+.||++|||++|+
T Consensus       227 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~el  302 (318)
T d3blha1         227 ----EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA  302 (318)
T ss_dssp             ----HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ----HHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence                111111111100000 0000000                  0     00113467899999999999999999999


Q ss_pred             HH
Q psy14889        422 KK  423 (443)
Q Consensus       422 l~  423 (443)
                      ++
T Consensus       303 L~  304 (318)
T d3blha1         303 LN  304 (318)
T ss_dssp             HH
T ss_pred             Hc
Confidence            85

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-46  Score=362.19  Aligned_cols=260  Identities=20%  Similarity=0.222  Sum_probs=191.3

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCC--cccEEEe
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQLWL  211 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~~~l  211 (443)
                      .+|+..++||+|+||+||+|++  +|+.||||++..... ...+|.  ..+..++||||+++++++.....  ...+++|
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~Ei--~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FKNREL--QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-SCCHHH--HHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-HHHHHH--HHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            3689999999999999999998  589999999865432 233444  44555999999999999865422  2246899


Q ss_pred             eecccCcccHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecC
Q psy14889        212 VTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFG  286 (443)
Q Consensus       212 v~e~~~~gsL~~~l~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfG  286 (443)
                      ||||+++|.+..+..    ...+++.++..++.||+.||+|||++        +|+||||||+|||++.++ .+||+|||
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------~IiHrDiKp~NILl~~~~~~~kl~DFG  168 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--------GICHRDIKPQNLLLDPDTAVLKLCDFG  168 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc--------CCcccCCCcceEEEecCCCceeEeccc
Confidence            999998764443332    35799999999999999999999998        999999999999999775 89999999


Q ss_pred             CcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCC
Q psy14889        287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP  366 (443)
Q Consensus       287 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~  366 (443)
                      +++.+.....     .....||..|+|||.+.+..     .++.++|||||||++|||++|          ..||.... 
T Consensus       169 ~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-----~~~~~~DIwSlG~il~el~~g----------~~pf~~~~-  227 (350)
T d1q5ka_         169 SAKQLVRGEP-----NVSYICSRYYRAPELIFGAT-----DYTSSIDVWSAGCVLAELLLG----------QPIFPGDS-  227 (350)
T ss_dssp             TCEECCTTSC-----CCSCCSCTTSCCHHHHTTCS-----SCCTHHHHHHHHHHHHHHHHT----------SCSSCCSS-
T ss_pred             chhhccCCcc-----cccccccccccChHHhhccc-----CCCcceeecccceEEEehhhC----------CCCCCCCC-
Confidence            9987654322     23457999999999887542     567899999999999999999          56665421 


Q ss_pred             CCCChHHHHhhhhh--------------cCCCCCCCCC-------CCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--
Q psy14889        367 MDPSFDDMRKVICI--------------DQQRPVLPNR-------WVSDSTLNAMTKVMKECWHQNANVRLSALRVKK--  423 (443)
Q Consensus       367 ~~~~~~~~~~~~~~--------------~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--  423 (443)
                         ..+.+..++..              ......++..       ......++++.+|+.+||+.||++|||+.|+++  
T Consensus       228 ---~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  304 (350)
T d1q5ka_         228 ---GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS  304 (350)
T ss_dssp             ---HHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             ---HHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence               11111111110              0001111100       112235678999999999999999999999986  


Q ss_pred             HHHHHhh
Q psy14889        424 TLIKLAC  430 (443)
Q Consensus       424 ~L~~l~~  430 (443)
                      .++++.+
T Consensus       305 ~f~~~~~  311 (350)
T d1q5ka_         305 FFDELRD  311 (350)
T ss_dssp             GGGGGGC
T ss_pred             hhccccC
Confidence            3555544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.6e-46  Score=355.77  Aligned_cols=263  Identities=20%  Similarity=0.211  Sum_probs=200.6

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccC-ccchHHHHHHHHHHhccC-CCceeeeeeccccCCcccEEE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRD-EASWSRETEIYSTVLLRH-ENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~-~~~~~~e~ei~~~~~l~H-~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      .++|++.+.||+|+||+||+|++  +|+.||||++.... ......|.++..  .+.| +|++.+++++...    ...+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~--~l~~~~~i~~~~~~~~~~----~~~~   77 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYK--LLAGCTGIPNVYYFGQEG----LHNV   77 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHH--HTTTCTTCCCEEEEEEET----TEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHH--HhcCCCCCCEEEEEeecC----CccE
Confidence            46899999999999999999997  58999999875543 233444544444  3655 8999999988765    4579


Q ss_pred             eeecccCcccHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcC-----CCcEEEE
Q psy14889        211 LVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-----NGTCVIA  283 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~-----~~~~kl~  283 (443)
                      +||||+ +|+|.+++..  ..+++.++..++.|++.||+|||+.        +|+||||||+|||++.     ++.+||+
T Consensus        78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~--------giiHrDiKp~Nili~~~~~~~~~~vkl~  148 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK--------SLVYRDIKPDNFLIGRPNSKNANMIYVV  148 (293)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT--------TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC--------CceeccCCccceeecCcccccCCceEEc
Confidence            999998 5799998864  5699999999999999999999998        9999999999999975     5689999


Q ss_pred             ecCCcccccccCCcCC---CCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCC
Q psy14889        284 DFGLAVSYSQLSNKMD---IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP  360 (443)
Q Consensus       284 DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P  360 (443)
                      |||+|+.+........   .......||+.|||||++.+.      .++.++|||||||++|||+||          ..|
T Consensus       149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~------~~~~~~DiwSlG~~l~elltg----------~~P  212 (293)
T d1csna_         149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR------EQSRRDDLEALGHVFMYFLRG----------SLP  212 (293)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC------CCCHHHHHHHHHHHHHHHHHS----------SCT
T ss_pred             ccceeEEcccCccccceeecccCceEEchhhcCHHHhcCC------CCChHHHHHHhhHHHHHHHhC----------CCc
Confidence            9999987764332221   123456899999999999876      678899999999999999999          778


Q ss_pred             CCCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHhhcc
Q psy14889        361 YHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD  432 (443)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~l~~~~  432 (443)
                      |....... ............ .....+  .....+++++.+++..||..+|++||+++.+.+.|+++.+..
T Consensus       213 f~~~~~~~-~~~~~~~i~~~~-~~~~~~--~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         213 WQGLKAAT-NKQKYERIGEKK-QSTPLR--ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             TSSCCSCC-HHHHHHHHHHHH-HHSCHH--HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CCCccchh-HHHHHHHHHhcc-CCCChH--HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            86543221 111111111111 111100  011235678999999999999999999999999999887644

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.7e-46  Score=360.31  Aligned_cols=251  Identities=21%  Similarity=0.259  Sum_probs=190.0

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-cCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-RHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      ++|++.+.||+|+||+||+|+.  +|+.||||++.........+|.++  +..+ .||||+++++++.....  ..+++|
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~i--l~~l~~hpnIv~~~~~~~~~~~--~~~~~v  110 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKI--LENLRGGPNIITLADIVKDPVS--RTPALV  110 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHH--HHHHTTSTTBCCEEEEEECTTT--CSEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHH--HHhccCCCCCcEEEEEEEecCC--CceeEE
Confidence            6799999999999999999998  589999999876555444455544  4446 49999999999875543  357999


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC-cEEEEecCCcccc
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG-TCVIADFGLAVSY  291 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~-~~kl~DfGla~~~  291 (443)
                      |||+.+|+|..+.  +.+++..+..++.||+.||+|||++        +|+||||||+|||++.++ .+||+|||+|+..
T Consensus       111 ~e~~~~~~L~~~~--~~l~e~~i~~i~~qil~aL~~LH~~--------gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         111 FEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYCHSM--------GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             EECCCSCBGGGTT--TSCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             EeecCCCcHHHHh--cCCCHHHHHHHHHHHHHHHHHHhhc--------ccccccccccceEEcCCCCeeeecccccceec
Confidence            9999999998775  4699999999999999999999999        999999999999998765 6899999999876


Q ss_pred             cccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCCCh
Q psy14889        292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF  371 (443)
Q Consensus       292 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~~~  371 (443)
                      .....     .....||+.|+|||.+.+..     .++.++||||+||++|||++|          ..||.....   ..
T Consensus       181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~~l~e~~~g----------~~pf~~~~~---~~  237 (328)
T d3bqca1         181 HPGQE-----YNVRVASRYFKGPELLVDYQ-----MYDYSLDMWSLGCMLASMIFR----------KEPFFHGHD---NY  237 (328)
T ss_dssp             CTTCC-----CCSCCSCGGGCCHHHHTTCC-----CCCTHHHHHHHHHHHHHHHHT----------CSSSSCCSS---HH
T ss_pred             cCCCc-----ccccccCccccCcccccCCC-----CCCcccchhhhhhhhHHhccC----------CCCCCCCch---hH
Confidence            54322     24457899999999987652     456899999999999999999          555543211   11


Q ss_pred             HHHHhhhh------------h------------cC--CCC---CCCCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHH
Q psy14889        372 DDMRKVIC------------I------------DQ--QRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK  422 (443)
Q Consensus       372 ~~~~~~~~------------~------------~~--~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl  422 (443)
                      ........            .            ..  ...   ..........+++++.+||++||+.||++|||++|++
T Consensus       238 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L  317 (328)
T d3bqca1         238 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM  317 (328)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            10000000            0            00  000   0001111233567899999999999999999999997


Q ss_pred             H
Q psy14889        423 K  423 (443)
Q Consensus       423 ~  423 (443)
                      +
T Consensus       318 ~  318 (328)
T d3bqca1         318 E  318 (328)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-46  Score=355.16  Aligned_cols=249  Identities=25%  Similarity=0.383  Sum_probs=193.8

Q ss_pred             ccccccceeeeecCeEEEEEEE-----CCceeEEEEeeccC-------ccchHHHHHHHHHHhccC-CCceeeeeecccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW-----HGENVAVKIFFSRD-------EASWSRETEIYSTVLLRH-ENILGYIGSDMTS  202 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~-------~~~~~~e~ei~~~~~l~H-~nIv~l~g~~~~~  202 (443)
                      ++|++.+.||+|+||+||+|+.     +|+.||||++....       .....+|.++  +.+++| |||+++++++.+.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~i--l~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV--LEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHH--HHHHHTCTTBCCEEEEEEET
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHH--HHhccCCCeEEEeeeeeccC
Confidence            6799999999999999999986     37899999875321       1223345444  444767 8999999998877


Q ss_pred             CCcccEEEeeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEE
Q psy14889        203 RNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV  281 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~k  281 (443)
                          ..++++|||+.+|+|.+++.. ..+++..+..++.||+.||.|||+.        +|+||||||+|||++.++.+|
T Consensus       102 ----~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~--------~ivHrDiKp~Nill~~~~~vk  169 (322)
T d1vzoa_         102 ----TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL--------GIIYRDIKLENILLDSNGHVV  169 (322)
T ss_dssp             ----TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTSCEE
T ss_pred             ----CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC--------CEEeccCCccceeecCCCCEE
Confidence                458999999999999999864 5788999999999999999999999        999999999999999999999


Q ss_pred             EEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCC
Q psy14889        282 IADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY  361 (443)
Q Consensus       282 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~  361 (443)
                      |+|||+|+.+.......   .....||+.|+|||.+.+...    .++.++|||||||+||||+||          ..||
T Consensus       170 L~DFG~a~~~~~~~~~~---~~~~~g~~~~~~pe~~~~~~~----~~~~ksDIWSlG~iLyelltG----------~~PF  232 (322)
T d1vzoa_         170 LTDFGLSKEFVADETER---AYDFCGTIEYMAPDIVRGGDS----GHDKAVDWWSLGVLMYELLTG----------ASPF  232 (322)
T ss_dssp             ESCSSEEEECCGGGGGG---GCGGGSCCTTCCHHHHTTCC-------CTHHHHHHHHHHHHHHHHS----------SCTT
T ss_pred             Eeeccchhhhccccccc---ccccccccccchhHHhhcCCc----CCCchhhhHHHHHHHHHHHhC----------CCCC
Confidence            99999998765433221   234579999999999976522    456799999999999999999          7788


Q ss_pred             CCCCCCCCChHHHHhhhhhcCCCCCCCCCCCCchhHHHHHHHHHHHhcCCcCCCCc-----HHHHHH
Q psy14889        362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS-----ALRVKK  423 (443)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~  423 (443)
                      ....... ....+.+...  ...+.++     ..+++++.+|+.+||+.||++|||     ++|+++
T Consensus       233 ~~~~~~~-~~~~i~~~~~--~~~~~~~-----~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         233 TVDGEKN-SQAEISRRIL--KSEPPYP-----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             SCTTSCC-CHHHHHHHHH--HCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCCCHHH-HHHHHHHhcc--cCCCCCc-----ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            6654332 2223322221  1223333     236678999999999999999994     788876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-45  Score=344.99  Aligned_cols=254  Identities=22%  Similarity=0.249  Sum_probs=193.8

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCCcccEEE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLW  210 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~  210 (443)
                      ++|++.+.||+|+||+||+|++  +|+.||||+++.....   ......|+..+..++||||+++++++.+.    ...+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~----~~~~   77 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD----KKLT   77 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc----ccee
Confidence            5799999999999999999998  5889999998654322   22334677777779999999999999887    4579


Q ss_pred             eeecccCcccHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        211 LVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       211 lv~e~~~~gsL~~~l~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +|+|++.+++|..++.. ..+++..+..++.|++.||+|||++        +|+||||||+|||++.++.+||+|||.|+
T Consensus        78 iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~--------~IvHrDiKP~NIli~~~~~~kl~DFG~a~  149 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR--------NVLHRDLKPQNLLINRNGELKLANFGLAR  149 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT--------TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC--------CEeeecccCcccccccCCceeeeecchhh
Confidence            99999999999888754 5789999999999999999999998        99999999999999999999999999998


Q ss_pred             cccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCCC
Q psy14889        290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP  369 (443)
Q Consensus       290 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~~  369 (443)
                      ........    .....++..|+|||.+....     .++.++|||||||++|||++|          ..||....   .
T Consensus       150 ~~~~~~~~----~~~~~~~~~~~~pe~~~~~~-----~~~~~~DiwSlG~il~ell~g----------~~p~~~~~---~  207 (292)
T d1unla_         150 AFGIPVRC----YSAEVVTLWYRPPDVLFGAK-----LYSTSIDMWSAGCIFAELANA----------GRPLFPGN---D  207 (292)
T ss_dssp             ECCSCCSC----CCSCCSCGGGCCHHHHTTCS-----CCCTHHHHHHHHHHHHHHTTT----------SCCSCCCS---S
T ss_pred             cccCCCcc----ceeeccccchhhhhHhccCC-----CCCchhhccccchHHHHHhhC----------CCCCCCCC---C
Confidence            76543322    23346778999999987652     356899999999999999999          44543211   1


Q ss_pred             ChHHHHhhhhhcCC-----------------CCCC----CCCCCCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        370 SFDDMRKVICIDQQ-----------------RPVL----PNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       370 ~~~~~~~~~~~~~~-----------------~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ..+.+.........                 .+..    .........++.+.+|+.+||+.||++|||++|+++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111111110000                 0000    000112234578999999999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-45  Score=355.83  Aligned_cols=260  Identities=20%  Similarity=0.255  Sum_probs=191.1

Q ss_pred             hccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccc---hHHHHHHHHHHhccCCCceeeeeeccccCC-cccE
Q psy14889        135 AKQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGSDMTSRN-SCTQ  208 (443)
Q Consensus       135 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~---~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~-~~~~  208 (443)
                      .++|++.+.||+|+||+||+|+.  +|+.||||++.......   .....|+..+..++|||||++++++..... ....
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            47899999999999999999997  58999999986543221   122456666777999999999999864421 1122


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      .+++++|+.+|+|.+++..+.+++..+..++.||+.||+|||++        +|+||||||+|||++.++.+|++|||++
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~--------giiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA--------DIIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC--------CCcccccCCccccccccccccccccchh
Confidence            45667788899999999888999999999999999999999999        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      .......       ....||+.|+|||.+.+..     .++.++|||||||++|||++|          ..||.+..   
T Consensus       169 ~~~~~~~-------~~~~g~~~y~apE~~~~~~-----~~~~~~DiwSlGv~l~~ll~g----------~~pF~~~~---  223 (348)
T d2gfsa1         169 RHTDDEM-------TGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG----------RTLFPGTD---  223 (348)
T ss_dssp             -CCTGGG-------SSSCHHHHTSCHHHHTTCS-----CCCTTHHHHHHHHHHHHHHHS----------SCSCCCSS---
T ss_pred             cccCccc-------ccccccccccCchhhcCCc-----cCCcccchhhhhHHHHHHHhC----------CCCCCCCC---
Confidence            6554322       3457999999999877652     346899999999999999999          55664321   


Q ss_pred             CChHHHHhhhhhc--------------------CCCCCCCCCC---CCchhHHHHHHHHHHHhcCCcCCCCcHHHHHH--
Q psy14889        369 PSFDDMRKVICID--------------------QQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLSALRVKK--  423 (443)
Q Consensus       369 ~~~~~~~~~~~~~--------------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--  423 (443)
                       .......+....                    ...+..+...   .....+.++.+||.+||+.||++|||+.|+++  
T Consensus       224 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp  302 (348)
T d2gfsa1         224 -HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  302 (348)
T ss_dssp             -HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             -HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence             011111111000                    0001111100   01234567899999999999999999999987  


Q ss_pred             HHHHH
Q psy14889        424 TLIKL  428 (443)
Q Consensus       424 ~L~~l  428 (443)
                      .++++
T Consensus       303 ~f~~~  307 (348)
T d2gfsa1         303 YFAQY  307 (348)
T ss_dssp             GGTTT
T ss_pred             hhCCC
Confidence            35444

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-44  Score=349.99  Aligned_cols=258  Identities=22%  Similarity=0.270  Sum_probs=181.2

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCcc---chHHHHHHHHHHhccCCCceeeeeeccccCC--cccE
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILGYIGSDMTSRN--SCTQ  208 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~---~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~--~~~~  208 (443)
                      ++|++.++||+|+||+||+|++  +|+.||||++......   ......|+..+..++|||||++++++.....  ....
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            6899999999999999999998  5899999998654322   1223456666667999999999999875432  2357


Q ss_pred             EEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        209 LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       209 ~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      +|+||||+.++.+ +.+. ..+++..+..++.||+.||.|||+.        ||+||||||+|||++.++.+|++|||++
T Consensus        97 ~~iv~Ey~~~~l~-~~~~-~~~~~~~i~~~~~qil~gl~~LH~~--------giiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          97 VYLVMELMDANLC-QVIQ-MELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             EEEEEECCSEEHH-HHHT-SCCCHHHHHHHHHHHHHHHHHHHHT--------TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             eEEEEeccchHHH-Hhhh-cCCCHHHHHHHHHHHHHHHHHhhhc--------ccccccCCccccccccccceeeechhhh
Confidence            8999999986544 4443 4689999999999999999999999        9999999999999999999999999998


Q ss_pred             ccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCC
Q psy14889        289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD  368 (443)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~~~~~~~~P~~~~~~~~  368 (443)
                      +.......     .....||+.|+|||++.+.      .+++++||||+||++|||++|          ..||.+.....
T Consensus       167 ~~~~~~~~-----~~~~~~t~~y~aPE~l~~~------~~~~~~DiwSlG~~l~ell~g----------~~pF~~~~~~~  225 (355)
T d2b1pa1         167 RTAGTSFM-----MTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRH----------KILFPGRDYID  225 (355)
T ss_dssp             -------------------CCTTCCHHHHTTC------CCCTTHHHHHHHHHHHHHHHS----------SCSSCCSSHHH
T ss_pred             hccccccc-----cccccccccccChhhhcCC------CCCCCcccccccchHHHHhhC----------CCCCCCCCHHH
Confidence            76554322     2345799999999999876      677899999999999999999          55554321000


Q ss_pred             ------------------CChHHHHhhhhhcCCCCCC-----------CC-CCCCchhHHHHHHHHHHHhcCCcCCCCcH
Q psy14889        369 ------------------PSFDDMRKVICIDQQRPVL-----------PN-RWVSDSTLNAMTKVMKECWHQNANVRLSA  418 (443)
Q Consensus       369 ------------------~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~  418 (443)
                                        ...................           +. .......++++.+|+.+||+.||++|||+
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta  305 (355)
T d2b1pa1         226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV  305 (355)
T ss_dssp             HHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH
Confidence                              0000000011000000000           00 00012346789999999999999999999


Q ss_pred             HHHHHH
Q psy14889        419 LRVKKT  424 (443)
Q Consensus       419 ~evl~~  424 (443)
                      +|+++.
T Consensus       306 ~elL~H  311 (355)
T d2b1pa1         306 DDALQH  311 (355)
T ss_dssp             HHHHTS
T ss_pred             HHHhcC
Confidence            999853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-40  Score=322.41  Aligned_cols=256  Identities=19%  Similarity=0.221  Sum_probs=177.1

Q ss_pred             ccccccceeeeecCeEEEEEEE--CCceeEEEEeeccCccchHHHHHHHHHHhc-----------cCCCceeeeeecccc
Q psy14889        136 KQISLSECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLL-----------RHENILGYIGSDMTS  202 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~~~~~~~~~~~~e~ei~~~~~l-----------~H~nIv~l~g~~~~~  202 (443)
                      ++|++.++||+|+||+||+|+.  +|+.||||+++.........+.|+..+..+           .|+||+++++++...
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            4699999999999999999997  689999999875533222333444433333           468899999988765


Q ss_pred             CCcccEEEeeecccCccc-HHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCCC
Q psy14889        203 RNSCTQLWLVTHYHSFGS-LYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG  278 (443)
Q Consensus       203 ~~~~~~~~lv~e~~~~gs-L~~~l---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~~  278 (443)
                      ..  ...+++++++..+. .....   ....+++..+..++.||+.||+|||+..       +|+||||||+|||++.++
T Consensus        93 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~-------~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_          93 GP--NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-------GIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             ET--TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT-------CEECSCCSGGGEEEEEEE
T ss_pred             cc--cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc-------CcccccCChhHeeeeccC
Confidence            44  23455555544333 22222   2357899999999999999999999831       899999999999998765


Q ss_pred             ------cEEEEecCCcccccccCCcCCCCCCCcccccCcccccccccccccCcCCCCCccchHHHHHHHHHHHhcccCCC
Q psy14889        279 ------TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG  352 (443)
Q Consensus       279 ------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~sDvwS~Gvvl~elltg~~~~~  352 (443)
                            .+|++|||.|......       .....||+.|+|||++...      .++.++||||+||+++||++|+    
T Consensus       164 ~~~~~~~~kl~dfg~s~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~el~~g~----  226 (362)
T d1q8ya_         164 SPENLIQIKIADLGNACWYDEH-------YTNSIQTREYRSPEVLLGA------PWGCGADIWSTACLIFELITGD----  226 (362)
T ss_dssp             TTTTEEEEEECCCTTCEETTBC-------CCSCCSCGGGCCHHHHHTC------CCCTHHHHHHHHHHHHHHHHSS----
T ss_pred             cccccceeeEeecccccccccc-------cccccccccccChhhcccc------CCCccccccchHHHHHHHHHCC----
Confidence                  3899999998755432       2345799999999999876      6778999999999999999994    


Q ss_pred             cccccCCCCCCCCCCCC--ChHHHHhhhhhcC---------------------CCCCCC-------------CCCCCchh
Q psy14889        353 IFEEYKAPYHDLVPMDP--SFDDMRKVICIDQ---------------------QRPVLP-------------NRWVSDST  396 (443)
Q Consensus       353 ~~~~~~~P~~~~~~~~~--~~~~~~~~~~~~~---------------------~~~~~~-------------~~~~~~~~  396 (443)
                            .||........  ..+.+...+..-+                     ......             ........
T Consensus       227 ------~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (362)
T d1q8ya_         227 ------FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE  300 (362)
T ss_dssp             ------CCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHH
T ss_pred             ------CCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCccc
Confidence                  44443211100  0001111000000                     000000             00112346


Q ss_pred             HHHHHHHHHHHhcCCcCCCCcHHHHHH
Q psy14889        397 LNAMTKVMKECWHQNANVRLSALRVKK  423 (443)
Q Consensus       397 ~~~l~~li~~cl~~dP~~Rps~~evl~  423 (443)
                      ++++.+|+.+||..||.+|||++|+++
T Consensus       301 ~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         301 AKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            788999999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=8.9e-25  Score=192.39  Aligned_cols=132  Identities=16%  Similarity=0.145  Sum_probs=101.8

Q ss_pred             ccccceeeeecCeEEEEEEE-CCceeEEEEeeccCc-------------cc------hHHHHHHHHHHhccCCCceeeee
Q psy14889        138 ISLSECIGKGRYGEVWRGVW-HGENVAVKIFFSRDE-------------AS------WSRETEIYSTVLLRHENILGYIG  197 (443)
Q Consensus       138 ~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~~~~~~~-------------~~------~~~e~ei~~~~~l~H~nIv~l~g  197 (443)
                      +.+.++||+|+||+||+|.. +|+.||||+++....             ..      ...+.|...+..+.|.+++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            35678999999999999987 789999998643110             01      11134555666689999998876


Q ss_pred             eccccCCcccEEEeeecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcCCCCCCeEEeCCCCCCEEEcCC
Q psy14889        198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN  277 (443)
Q Consensus       198 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~~~~~~iiHrDlk~~NiLl~~~  277 (443)
                      +..        .+++|||++++.+.+      ++......++.|++.||.|||+.        +|+||||||+|||++++
T Consensus        82 ~~~--------~~lvme~~~~~~~~~------l~~~~~~~i~~ql~~~l~~lH~~--------giiHrDiKP~NILv~~~  139 (191)
T d1zara2          82 WEG--------NAVLMELIDAKELYR------VRVENPDEVLDMILEEVAKFYHR--------GIVHGDLSQYNVLVSEE  139 (191)
T ss_dssp             EET--------TEEEEECCCCEEGGG------CCCSCHHHHHHHHHHHHHHHHHT--------TEECSCCSTTSEEEETT
T ss_pred             ecC--------CEEEEEeeccccccc------hhhHHHHHHHHHHHHHHHHHhhC--------CEEEccCChhheeeeCC
Confidence            521        269999999865543      45566778999999999999998        99999999999999865


Q ss_pred             CcEEEEecCCccccc
Q psy14889        278 GTCVIADFGLAVSYS  292 (443)
Q Consensus       278 ~~~kl~DfGla~~~~  292 (443)
                       .++|+|||+|+...
T Consensus       140 -~~~liDFG~a~~~~  153 (191)
T d1zara2         140 -GIWIIDFPQSVEVG  153 (191)
T ss_dssp             -EEEECCCTTCEETT
T ss_pred             -CEEEEECCCcccCC
Confidence             58999999986554

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.25  E-value=3.5e-06  Score=75.35  Aligned_cols=144  Identities=15%  Similarity=0.065  Sum_probs=91.4

Q ss_pred             ccccccceeeeecCeEEEEEEECCceeEEEEeeccCc---cchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEee
Q psy14889        136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE---ASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLV  212 (443)
Q Consensus       136 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv  212 (443)
                      +.|+..+..+-++.+.||+...++..+.||+......   .....|.++..... .+--+.+++.+....    ...++|
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~-~~vpvP~vl~~~~~~----~~~~lv   88 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLE-GKLPVPKVLHFERHD----GWSNLL   88 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-TTSCCCCEEEEEEET----TEEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHh-ccCCCCcEEEEEecC----CceEEE
Confidence            4566555544445578999887888899998754332   22334444433321 222245556554433    346899


Q ss_pred             ecccCcccHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchhcC------------------------------------
Q psy14889        213 THYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT------------------------------------  256 (443)
Q Consensus       213 ~e~~~~gsL~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~------------------------------------  256 (443)
                      |++.++.++.+....    ......++.+++..+..||+.....                                    
T Consensus        89 ~~~l~G~~~~~~~~~----~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (263)
T d1j7la_          89 MSEADGVLCSEEYED----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF  164 (263)
T ss_dssp             EECCSSEEHHHHTTT----CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSC
T ss_pred             EEecccccccccccc----cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccc
Confidence            999999888765432    2223445677777788888642110                                    


Q ss_pred             ---------------CCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        257 ---------------QGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       257 ---------------~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                                     ...+.++|+|+.|.|||+++++.+-|+||+.+
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             SSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             hHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhc
Confidence                           01235899999999999998777789999876

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.05  E-value=7.8e-06  Score=72.56  Aligned_cols=135  Identities=16%  Similarity=0.049  Sum_probs=81.8

Q ss_pred             eeeeecC-eEEEEEEEC-CceeEEEEeeccCccchHHHHHHHHHHhccCCCceeeeeeccccCCcccEEEeeecccCccc
Q psy14889        143 CIGKGRY-GEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS  220 (443)
Q Consensus       143 ~lG~G~f-g~Vy~~~~~-~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nIv~l~g~~~~~~~~~~~~~lv~e~~~~gs  220 (443)
                      .+..|.. +.||+...+ +..+.+|............|.+.+....-..-.+.+++++..+.    ...++||+|+++-+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~----~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEA----GRDWLLLGEVPGQD   92 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS----SCEEEEEECCSSEE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeecccc----cceEEEEEeeeccc
Confidence            3444543 678998874 55688897766555556667666655332333355666665544    34689999998866


Q ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHchh----------------------------------------------
Q psy14889        221 LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF----------------------------------------------  254 (443)
Q Consensus       221 L~~~l~~~~l~~~~~~~i~~qia~gL~yLH~~~~----------------------------------------------  254 (443)
                      +.+..    ...   ...+.+++..|.-||+...                                              
T Consensus        93 ~~~~~----~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (255)
T d1nd4a_          93 LLSSH----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL  165 (255)
T ss_dssp             TTTSC----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred             ccccc----ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHH
Confidence            53311    111   1122334444444443110                                              


Q ss_pred             ----cCCCCCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        255 ----GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       255 ----~~~~~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                          .....+.++|+|+.|.|||++++..+-|+||+.+
T Consensus       166 ~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         166 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             HHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhc
Confidence                0112345899999999999998777789999876

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.25  E-value=0.00098  Score=62.76  Aligned_cols=29  Identities=17%  Similarity=0.320  Sum_probs=25.0

Q ss_pred             CCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        260 PAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       260 ~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      +.++|+|+.+.|||++++. ++|+||..|.
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~  251 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAF  251 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhcc
Confidence            3689999999999998765 8999998873

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.35  E-value=0.0066  Score=56.84  Aligned_cols=75  Identities=15%  Similarity=0.138  Sum_probs=43.5

Q ss_pred             cccccceeeeecCeEEEEEEEC---------CceeEEEEeeccCccchHHHHHHHHHHhccCCCc-eeeeeeccccCCcc
Q psy14889        137 QISLSECIGKGRYGEVWRGVWH---------GENVAVKIFFSRDEASWSRETEIYSTVLLRHENI-LGYIGSDMTSRNSC  206 (443)
Q Consensus       137 ~~~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~~~~e~ei~~~~~l~H~nI-v~l~g~~~~~~~~~  206 (443)
                      ++++ +.|+-|-.-.+|+....         ++.|.+++.- .......++.|...+..+.-.++ .++++++..     
T Consensus        44 ~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~-----  116 (395)
T d1nw1a_          44 HLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIFSG-----  116 (395)
T ss_dssp             GEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT-----
T ss_pred             ceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC-----
Confidence            4444 56777888899998863         2456666553 32233334444444443432344 467776532     


Q ss_pred             cEEEeeecccCcccH
Q psy14889        207 TQLWLVTHYHSFGSL  221 (443)
Q Consensus       207 ~~~~lv~e~~~~gsL  221 (443)
                         .+|+||+++..|
T Consensus       117 ---g~I~efi~g~~l  128 (395)
T d1nw1a_         117 ---GRLEEYIPSRPL  128 (395)
T ss_dssp             ---EEEECCCCEEEC
T ss_pred             ---ceEEEEeccccC
Confidence               588999987544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.012  Score=53.49  Aligned_cols=29  Identities=24%  Similarity=0.206  Sum_probs=23.7

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCcc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAV  289 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla~  289 (443)
                      ..++||+|+.+.|||++++  ..++||+-+.
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~  219 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDAR  219 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhcc
Confidence            4589999999999999743  4589998763

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.79  E-value=0.049  Score=48.68  Aligned_cols=30  Identities=20%  Similarity=0.330  Sum_probs=27.0

Q ss_pred             CCCeEEeCCCCCCEEEcCCCcEEEEecCCc
Q psy14889        259 KPAIAHRDIKSKNILVKTNGTCVIADFGLA  288 (443)
Q Consensus       259 ~~~iiHrDlk~~NiLl~~~~~~kl~DfGla  288 (443)
                      ..++||+|+.+.||+++.+...-|.||+.+
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFA  211 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             ccccccCCcchhhhhcccccceeEeccccc
Confidence            448999999999999998887889999976

>d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: BMP receptor Ia ectodomain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.50  E-value=0.12  Score=36.22  Aligned_cols=30  Identities=37%  Similarity=0.784  Sum_probs=22.3

Q ss_pred             ccccCCC--CCeeEecCCCCCCCCCCCCCCCC
Q psy14889          3 SCHSVNV--GQFTIQCCDGDFCNNGSFPILPP   32 (443)
Q Consensus         3 ~~~~~~~--~~~~~~~~~~~~c~~~~~~~~~~   32 (443)
                      .|++...  +.+..+||++|+||.+..+.+||
T Consensus        53 ~C~~~~~~~~~~~~~CC~~D~CN~~l~P~lpP   84 (84)
T d2h62c1          53 QCKDSPKAQLRRTIECCRTNLCNQYLQPTLPP   84 (84)
T ss_dssp             HHHCCTTCSSCEEEEEECSTTGGGGCCCCCCC
T ss_pred             EeCCCCCCCCceEEEeCCCCccCcCCcCCCCc
Confidence            3554433  46788999999999998877665

>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Snake toxin-like
superfamily: Snake toxin-like
family: Extracellular domain of cell surface receptors
domain: Type II activin receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.92  E-value=0.063  Score=38.45  Aligned_cols=20  Identities=25%  Similarity=0.674  Sum_probs=17.3

Q ss_pred             CCeeEecCCCCCCCCCCCCC
Q psy14889         10 GQFTIQCCDGDFCNNGSFPI   29 (443)
Q Consensus        10 ~~~~~~~~~~~~c~~~~~~~   29 (443)
                      .+..||||.||+||..++..
T Consensus        73 ~~~~FCCC~gd~CN~nfs~~   92 (96)
T d1btea_          73 PEVYFCCCEGNMCNEKFSYF   92 (96)
T ss_dssp             CSSEEEEECSTTGGGSEEEC
T ss_pred             CceEEEeCCCCccccccccC
Confidence            47899999999999987754